[ { "sequence" : { "name" : "ERR346596.41 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15115:1726 (reversed)", "sequence" : "AGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGTTGGTGAAGCCTGGGACTTCAGTGAAGATATCCTGCAAGCCTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCGGAGGGTCGATATTACTTTGCTATGAACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCCTTGTACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 29, 32, 32, 31, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 35, 19, 38, 33, 19, 38, 39, 38, 38, 37, 37, 37, 39, 37, 38, 39, 34, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 38, 20, 37, 37, 38, 38, 38, 39, 39, 38, 38, 39, 39, 16, 37, 37, 39, 38, 39, 39, 39, 20, 37, 37, 38, 37, 39, 37, 38, 39, 38, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 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38, 38, 38, 38, 36, 36, 37, 38, 36, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 36, 38, 38, 38, 38, 37, 38, 37, 38, 37, 37, 38, 37, 34, 37, 32, 33, 33, 33, 37, 37, 32, 18, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGTSVKISCKPS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSEGRYYFAMNY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFALDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFALDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" 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"QVQLKESGPELVKPGTSVKISCKPSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSEGRYYFAMNYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.56 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19015:1750 (reversed)", "sequence" : "TGGCGACGTGATGCTGGTGGAGTCTGGGGGAGGTTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAAGACACGGGGGTAGTAGAGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCCCTGGGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 29, 29, 16, 16, 29, 35, 32, 32, 37, 38, 38, 38, 38, 38, 38, 38, 34, 15, 37, 37, 37, 37, 33, 38, 37, 34, 36, 14, 36, 30, 36, 37, 38, 34, 38, 39, 39, 38, 37, 37, 37, 36, 38, 39, 38, 37, 39, 38, 38, 38, 38, 36, 32, 39, 39, 33, 37, 36, 16, 38, 37, 39, 38, 39, 38, 39, 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39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 38, 36, 38, 38, 38, 39, 38, 38, 39, 33, 38, 34, 39, 37, 39, 37, 39, 38, 39, 39, 37, 32, 35, 18, 38, 35, 32, 39, 36, 33, 38, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 36, 38, 38, 39, 37, 37, 38, 37, 38, 38, 37, 37, 38, 37, 32, 32, 33, 32, 33, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHGGSRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHGGSRGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.63 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16211:1767 (reversed)", "sequence" : "TCTGGAGGTCCAACTGCAACAGTCTGGACCTGAGTTGGTGAAGCCTGGGACTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCGGAGGGTCGATATTACTTTGCTATGAACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTCATCCACTGGCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 33, 33, 37, 37, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 37, 19, 32, 33, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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37, 38, 37, 38, 20, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 36, 39, 39, 39, 37, 38, 39, 39, 37, 37, 33, 37, 37, 39, 38, 37, 36, 38, 38, 38, 37, 37, 38, 38, 37, 34, 38, 39, 38, 38, 34, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 38, 38, 38, 37, 35, 19, 19, 37, 37, 37, 37, 37, 32, 37, 33, 32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFALDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFALDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVRNWADY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARVRNWADYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.46 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14102:1734 (reversed)", "sequence" : "GGCTGAAGTGAAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCTTGTTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 32, 32, 37, 37, 37, 37, 37, 37, 33, 38, 38, 38, 38, 37, 38, 38, 37, 32, 38, 39, 39, 16, 37, 39, 33, 34, 36, 39, 39, 37, 37, 39, 39, 37, 37, 39, 39, 34, 39, 38, 38, 38, 36, 38, 36, 38, 36, 39, 38, 16, 38, 39, 36, 38, 39, 39, 39, 38, 37, 38, 37, 36, 38, 39, 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36, 36, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 38, 37, 39, 38, 39, 38, 38, 39, 37, 36, 39, 38, 38, 38, 38, 36, 37, 37, 38, 38, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 36, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 33, 33, 32, 32, 18, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } 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"FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKTSSTAYMELARLTSEESAIYYC" } ] }, { 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"V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"TATCCAGGTCCAACTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCTTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 32, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 19, 38, 38, 39, 37, 37, 39, 39, 37, 37, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 33, 36, 37, 38, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 36, 38, 38, 37, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 34, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 38, 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32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.168 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13770:1962 (reversed)", "sequence" : "TTTGGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGTAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCCCTGTCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 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38, 39, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 37, 39, 38, 39, 38, 39, 38, 38, 39, 38, 32, 39, 36, 37, 36, 16, 39, 36, 36, 37, 37, 17, 38, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 37, 36, 36, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 37, 37, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLGYFDVWGAGTTVAVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.176 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16751:1971 (reversed)", "sequence" : "CAAGGAAGTGATGTTGGTGGAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAGCTACAGTGGTAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAGACTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCTTGCGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 32, 38, 39, 36, 36, 38, 38, 38, 38, 39, 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"EVHLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSTLMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARYYYGFLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.8 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16227:1661 (reversed)", "sequence" : "NAAGCAGGTCCAGCTGCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGATGTCCTGCAAGGCTTCAGGCTATACCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTGATCCTTCCAATAGTGAAACTAGGTTAAATCAGAAGTTCATGGACAAGGCCACATTGAATGTAGACAAATCCTCCAACACAGCCTACATTCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGAACCACTTTGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTTATCCACTGCAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 16, 16, 29, 16, 16, 29, 16, 33, 16, 31, 16, 32, 33, 38, 16, 16, 16, 16, 16, 16, 33, 35, 37, 38, 35, 15, 33, 32, 32, 37, 15, 15, 15, 37, 38, 33, 15, 38, 33, 16, 15, 15, 36, 36, 37, 14, 14, 37, 30, 36, 36, 39, 37, 16, 38, 39, 38, 16, 16, 33, 14, 33, 32, 38, 37, 37, 38, 38, 37, 15, 33, 35, 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38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 36, 39, 38, 38, 38, 37, 34, 36, 18, 35, 37, 16, 38, 39, 39, 38, 38, 38, 38, 38, 37, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 35, 38, 38, 38, 38, 38, 38, 37, 19, 37, 37, 37, 37, 37, 33, 33, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVTMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFMDKATLNVDKSSNTAYIQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPSNSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHFAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WEPLNWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WEP" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "X80305" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVTMSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIDPSNSETRLNQKFMDKATLNVDKSSNTAYIQLSSLTSEDSAVYYCARNHFAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.10 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15630:1663 (reversed)", "sequence" : "NTGCGAGGTGAAGCTTCTCGAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGCAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTATATGTACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAATGGTGGTACTAACTTCAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACCTTATGGTGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGACCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 32, 32, 16, 29, 16, 32, 16, 16, 16, 35, 37, 38, 38, 35, 36, 37, 15, 16, 15, 33, 37, 38, 35, 15, 33, 30, 32, 36, 36, 15, 16, 37, 38, 16, 33, 39, 33, 16, 16, 32, 38, 38, 38, 37, 36, 32, 34, 36, 36, 38, 38, 16, 32, 37, 38, 16, 17, 16, 33, 38, 37, 38, 38, 37, 39, 37, 34, 15, 16, 36, 14, 38, 38, 39, 37, 39, 37, 16, 36, 38, 33, 36, 16, 33, 33, 37, 38, 38, 37, 38, 37, 38, 37, 39, 39, 16, 34, 38, 36, 39, 37, 38, 37, 39, 35, 35, 38, 38, 37, 36, 39, 34, 14, 37, 35, 39, 33, 37, 15, 38, 36, 37, 38, 39, 38, 38, 34, 39, 38, 34, 38, 39, 38, 39, 39, 39, 39, 37, 37, 39, 38, 38, 37, 38, 39, 37, 38, 39, 38, 37, 34, 37, 38, 38, 37, 27, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 37, 39, 37, 38, 38, 33, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 37, 39, 37, 39, 38, 39, 39, 39, 37, 34, 38, 38, 38, 39, 38, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 37, 37, 38, 39, 37, 38, 39, 38, 38, 38, 38, 37, 36, 39, 39, 39, 38, 33, 38, 39, 39, 38, 39, 38, 39, 39, 38, 38, 39, 38, 38, 38, 37, 37, 32, 18, 34, 37, 16, 38, 39, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 38, 38, 39, 38, 38, 38, 19, 38, 38, 37, 37, 38, 37, 32, 32, 33, 37, 37, 37, 37, 32, 32, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLLESGAELVKPGASVQLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TLWCYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLLESGAELVKPGASVQLSCKASGYTFTSYYMYWVKQRPGQGLEWIGEINPSNGGTNFNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTLWCYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.33 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18296:1715 (reversed)", "sequence" : "GGCGCAGGTGCAGCTGAAGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGTGAGGAACTGGGCCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCCCTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 32, 32, 30, 35, 35, 37, 37, 33, 37, 37, 38, 38, 38, 33, 16, 35, 33, 15, 38, 38, 37, 39, 39, 38, 34, 38, 34, 36, 34, 15, 34, 38, 38, 39, 39, 39, 38, 39, 37, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 16, 38, 39, 39, 36, 38, 39, 37, 39, 39, 39, 38, 39, 39, 38, 39, 37, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 15, 37, 39, 39, 37, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 37, 39, 38, 38, 37, 39, 38, 39, 37, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 33, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 36, 39, 38, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 36, 37, 38, 38, 36, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 36, 36, 38, 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32, 32, 32, 30, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 36, 37, 37, 38, 38, 39, 38, 39, 39, 39, 37, 39, 37, 39, 39, 19, 38, 37, 37, 39, 34, 37, 37, 38, 37, 39, 39, 39, 39, 38, 38, 38, 36, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 38, 39, 39, 39, 37, 38, 36, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 37, 39, 39, 38, 37, 38, 37, 37, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 39, 39, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 37, 38, 38, 38, 33, 39, 38, 39, 37, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 34, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 36, 39, 39, 39, 36, 34, 37, 36, 36, 34, 34, 34, 38, 39, 39, 39, 39, 38, 37, 37, 39, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 33, 37, 38, 37, 39, 34, 35, 37, 39, 39, 36, 17, 39, 39, 38, 37, 39, 38, 36, 36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 38, 37, 34, 38, 34, 34, 32, 32, 32, 33, 31, 33, 32, 32, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAEVVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVLGRPF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.48 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14610:1739 (reversed)", "sequence" : "TGTTGAGGTCCAGCTGCAACAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGATGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACCGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACAATGACTGTAGACAAATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACGCAGCGATCGATTTCGATGCAGGAGGTAACCCCTTTGCTTACGGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGCTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 29, 32, 32, 18, 34, 16, 37, 33, 37, 34, 38, 38, 38, 38, 33, 16, 33, 16, 32, 33, 38, 38, 39, 39, 37, 37, 34, 36, 36, 37, 15, 32, 36, 37, 37, 37, 38, 33, 38, 34, 37, 37, 39, 39, 37, 36, 38, 38, 38, 36, 38, 37, 35, 39, 39, 39, 16, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 16, 38, 39, 39, 39, 33, 37, 37, 16, 33, 37, 36, 39, 39, 38, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 15, 38, 37, 16, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 15, 38, 38, 15, 37, 38, 36, 36, 37, 39, 37, 16, 36, 37, 39, 38, 35, 36, 39, 39, 36, 27, 34, 34, 32, 38, 36, 39, 16, 29, 38, 38, 38, 39, 37, 39, 39, 33, 14, 30, 29, 34, 34, 31, 32, 34, 37, 32, 36, 33, 37, 26, 9, 38, 24, 24, 38, 39, 39, 39, 39, 39, 39, 39, 39, 24, 39, 35, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 2, 19, 22, 25, 34, 37, 38, 37, 37, 37, 38, 33, 33, 37, 38, 21, 37, 37, 23, 38, 37, 37, 33, 33, 37, 37, 38, 38, 38, 38, 22, 33, 33, 27, 34, 37, 37, 37, 37, 15, 16, 37, 27, 13, 15, 15, 15, 15, 30, 16, 16, 30, 16, 35, 16, 30, 16, 16, 34, 27, 29, 30, 14, 14, 14, 15, 30, 27, 15, 14, 15, 14, 16, 14, 30, 15, 15, 14, 16, 16, 15, 16, 16, 15, 34, 38, 33, 39, 38, 30, 29, 30, 14, 14, 15, 15, 37, 39, 38, 38, 39, 38, 38, 36, 29, 14, 38, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 37, 36, 38, 33, 37, 34, 38, 38, 39, 38, 36, 15, 39, 39, 39, 37, 39, 38, 38, 36, 38, 38, 38, 39, 38, 37, 37, 33, 37, 16, 37, 33, 16, 34, 32, 30, 35, 35, 16, 34, 32, 29, 16, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATMTVDKSSSTAYMQLSSLTSEDAAIDFD" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGNPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.21%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 286, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FRDYFDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "FR" }, { "name" : "IMGT_allele", "value" : "IGHD3-3*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-3" }, { "name" : "Source-Sequence", "value" : "AJ001404" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWMKQRPGQGLEWIGEINPSTGRTNYNEKFKNKATMTVDKSSSTAYMQLSSLTSEDAAIDFDAGGNPFAYGGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.85 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17587:1821 (reversed)", "sequence" : "AGCCGAGGTGAAGCTGATGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGGAGTCCCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCCCTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 32, 32, 33, 31, 32, 35, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 35, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 36, 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"QVQLQQSGPGLVAPSQSLSISCTVSGFSLNNYGVHWVRQPPGKGLEWLGVIWAGGGTNYNSTLMSRLSVIKDNSKSQVFLKMNSLQTDDTAMYYCVSELGGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.175 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17414:1970 (reversed)", "sequence" : "GATACAGGTTCAGCTCCAGCAATCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACAGAGGCCTGGGCAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAGGTGGTGGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTTTATCCCTTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 36, 32, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 36, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 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"CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGGGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVLGRPF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGGGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.185 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14219:1985 (reversed)", "sequence" : "GAACCAGGTGCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGCACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 19, 36, 39, 39, 39, 39, 38, 38, 38, 38, 38, 34, 38, 39, 39, 39, 38, 39, 38, 35, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 18, 37, 37, 39, 39, 39, 39, 38, 39, 39, 37, 39, 36, 38, 37, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 33, 37, 17, 30, 30, 37, 26, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 33, 37, 35, 38, 38, 35, 37, 31, 37, 36, 38, 37, 37, 38, 25, 38, 37, 38, 26, 25, 38, 39, 39, 37, 38, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 38, 38, 38, 32, 38, 37, 34, 38, 38, 34, 38, 39, 33, 38, 37, 38, 38, 33, 37, 38, 38, 39, 38, 38, 34, 37, 37, 37, 39, 38, 37, 38, 38, 38, 38, 38, 36, 39, 39, 37, 38, 38, 37, 21, 37, 38, 37, 37, 39, 38, 38, 37, 32, 34, 15, 15, 34, 37, 35, 39, 37, 16, 17, 39, 39, 39, 39, 39, 39, 37, 35, 39, 33, 34, 34, 38, 34, 36, 39, 37, 37, 39, 37, 37, 15, 37, 37, 16, 37, 15, 37, 16, 15, 36, 39, 39, 39, 37, 36, 36, 36, 14, 14, 15, 33, 16, 33, 16, 31, 37, 17, 39, 39, 37, 30, 36, 37, 37, 38, 38, 39, 39, 38, 37, 37, 38, 38, 33, 33, 29, 37, 37, 39, 38, 39, 38, 38, 33, 39, 39, 37, 16, 37, 36, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 36, 36, 36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 38, 37, 38, 37, 34, 29, 16, 35, 35, 37, 35, 18, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGSSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGNPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGSSVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSCAGGNPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.145 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12847:1924 (reversed)", "sequence" : "GGAGCAGGTCCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAATATTTATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACGACTGGGACGAGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", 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"name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNQMFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPSDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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16, 17, 17, 37, 37, 37, 38, 33, 16, 16, 38, 34, 36, 36, 38, 33, 16, 37, 39, 39, 37, 38, 34, 38, 38, 35, 31, 16, 33, 16, 32, 39, 36, 36, 14, 36, 36, 30, 34, 34, 38, 16, 39, 39, 37, 36, 14, 39, 37, 38, 37, 39, 37, 38, 36, 36, 30, 38, 39, 37, 33, 37, 33, 32, 16, 34, 36, 34, 37, 32, 16, 35, 35, 16, 35, 35, 32, 32, 32, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVQVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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37, 32, 33, 33, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWGRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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33, 32, 33, 33, 37, 37, 37, 33, 32, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGPGLVAPAQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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{ "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELATPGASVKMSCKASGYTFTTYWMHWIKQRPGQGLEWIGSINPNTDYTDYNQKFKDKATLTADKSSITAYMQLSSLTSEDSAVYYCARGLRDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.206 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14752:2023 (reversed)", "sequence" : "CTGAGAGGTGCAGGGGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATCTACGGAAGAGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCCCTGCTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 16, 32, 37, 37, 32, 37, 32, 37, 37, 37, 16, 36, 38, 34, 15, 32, 30, 37, 36, 38, 39, 39, 39, 38, 16, 33, 36, 14, 36, 36, 14, 37, 38, 32, 38, 39, 16, 37, 33, 38, 39, 39, 39, 37, 37, 38, 38, 34, 29, 36, 38, 33, 35, 38, 37, 39, 16, 16, 31, 38, 16, 38, 39, 37, 39, 39, 37, 39, 38, 36, 16, 33, 37, 38, 39, 39, 39, 39, 39, 39, 36, 37, 38, 37, 35, 37, 38, 38, 37, 37, 38, 39, 16, 37, 38, 38, 33, 39, 39, 39, 37, 39, 38, 33, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 30, 36, 34, 34, 38, 32, 38, 39, 39, 33, 38, 39, 37, 38, 37, 37, 37, 14, 15, 30, 38, 38, 39, 33, 38, 39, 39, 38, 39, 38, 38, 38, 38, 37, 33, 36, 38, 39, 24, 39, 33, 38, 15, 38, 35, 34, 15, 24, 34, 34, 34, 34, 39, 34, 38, 39, 38, 39, 39, 37, 38, 37, 39, 39, 37, 38, 34, 37, 37, 38, 37, 37, 37, 37, 38, 37, 38, 38, 37, 37, 37, 38, 38, 38, 38, 39, 38, 38, 38, 38, 34, 37, 30, 31, 32, 33, 16, 16, 37, 38, 37, 24, 34, 37, 39, 38, 37, 37, 37, 36, 37, 38, 37, 33, 33, 39, 34, 37, 38, 37, 39, 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"EVQGVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDIYGRDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TEAPDIMDAWGQGASVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TE" }, { "name" : "IMGT_allele", "value" : "IGHD1-6*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-6" }, { "name" : "Source-Sequence", "value" : "FJ041115" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDIYGRDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.207 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13336:2023 (reversed)", "sequence" : "CCTCGATGTGCACCTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTCGAATGGATTGGAGAAATTAATCCAGATAGCAGTACGATAAACTATACGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAACGGGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCAACAACAACAGCCCCATCAGCTTATCCCCTGGGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 31, 33, 33, 32, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 36, 37, 38, 39, 39, 39, 38, 39, 20, 38, 36, 17, 37, 37, 38, 38, 39, 38, 39, 39, 38, 39, 39, 35, 33, 38, 37, 39, 37, 37, 38, 36, 35, 39, 39, 39, 39, 39, 39, 37, 38, 33, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 35, 38, 39, 36, 39, 38, 36, 37, 38, 39, 39, 39, 38, 37, 20, 37, 39, 38, 39, 39, 39, 39, 39, 37, 37, 38, 37, 38, 38, 37, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 14, 29, 36, 36, 38, 39, 39, 38, 39, 39, 39, 38, 37, 37, 34, 34, 39, 35, 37, 39, 37, 37, 34, 39, 37, 39, 39, 36, 39, 39, 36, 37, 36, 37, 39, 39, 16, 37, 38, 37, 37, 37, 38, 37, 38, 36, 36, 37, 38, 39, 39, 37, 39, 39, 37, 38, 36, 13, 32, 34, 27, 35, 38, 35, 38, 36, 39, 39, 37, 38, 38, 38, 11, 34, 38, 37, 39, 39, 39, 34, 23, 37, 38, 38, 38, 34, 38, 34, 37, 34, 28, 34, 37, 37, 38, 37, 38, 37, 37, 33, 37, 15, 13, 24, 25, 37, 38, 37, 38, 30, 35, 36, 39, 37, 38, 34, 26, 37, 37, 37, 37, 37, 38, 37, 31, 33, 37, 33, 37, 37, 24, 37, 33, 16, 16, 33, 14, 34, 37, 30, 14, 33, 16, 29, 17, 16, 33, 16, 38, 33, 38, 37, 16, 33, 17, 15, 32, 36, 15, 14, 14, 16, 16, 16, 17, 37, 29, 17, 33, 33, 37, 16, 33, 16, 33, 16, 39, 38, 31, 17, 35, 33, 16, 39, 37, 38, 36, 30, 14, 14, 30, 14, 14, 37, 16, 37, 38, 37, 33, 15, 39, 36, 37, 17, 35, 37, 32, 14, 36, 39, 39, 37, 37, 36, 38, 35, 36, 37, 38, 39, 39, 39, 39, 39, 37, 33, 35, 39, 37, 37, 32, 37, 15, 32, 16, 37, 15, 38, 39, 39, 38, 37, 15, 39, 37, 39, 38, 39, 38, 37, 38, 38, 37, 37, 36, 37, 37, 38, 37, 38, 37, 38, 38, 32, 16, 32, 32, 35, 32, 32, 32, 32, 32, 32, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYTPSLKDKFIISRDNAKNTLYLQMSNGRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWIAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : "AF174030" }, { "name" : "Source-Mismatches", "value" : "65" }, { "name" : "Source-Identity", "value" : "78.04%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVQPGGSLKLSCAASGFDFSRYWMTWVRQAPGKGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLYLQMSNGRSEDTALYYCARNGYYGWIAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.210 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18519:2027 (reversed)", "sequence" : "GGACCAGGTCCAGCTCCAGCAATCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACAGCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGTTACTAGCTACAACCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAGTCCTCCAACACTGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTTCTGTGCAAGATGGGGCTGGGACTTTGCTACGGGCTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCTTGTTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKDKATLTVDKSSNTAYMELRSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGVT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWGWDFATGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.16%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKTSGYTFTEYSMHWVKQSHGKSLEWIGGINPNNGVTSYNQKFKDKATLTVDKSSNTAYMELRSLTSEDSAVYFCARWGWDFATGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.177 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15161:1975 (reversed)", "sequence" : "TTCCGAGGTGAAGCTGATGGAATCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCCTTGACGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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: "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.182 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16204:1981 (reversed)", "sequence" : "TACTGAGGTGCAGCGGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGCACG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 37, 38, 38, 37, 30, 36, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 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"VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.192 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14376:1999 (reversed)", "sequence" : "GCGGCAGGTGCAGCTGAAGGGGTCTGGGGCTGGACTGGGAAAACCTGGGGCCTCCGTGGAGATGTCCTGCCAGGCTTCTGGCTACCCCCTTTCTACCTCCTGGGTACCCTGGGGAAAACCGAGGCCTGGGCCGGGTCTGGGATGGATTTGATACATTAATCCTAGCACTGGTAATACTGAGTACAATCAGAAGTTCAGGGACAGGGCCACATTGACTGCAGACAAATCCTCCAGCACACCCTACATGCAACTGAGCAGCCTGACCTCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATTACGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCACAGCCAAAACAACACCCCCATCTGCTTATCCACTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 35, 30, 16, 33, 16, 34, 33, 16, 37, 16, 16, 32, 16, 33, 15, 32, 15, 15, 37, 33, 34, 39, 38, 15, 32, 14, 14, 33, 32, 37, 14, 37, 14, 15, 16, 14, 33, 32, 32, 37, 15, 33, 37, 38, 14, 14, 14, 15, 14, 32, 14, 33, 14, 14, 14, 33, 37, 33, 35, 17, 17, 35, 16, 16, 15, 31, 33, 38, 36, 39, 38, 15, 37, 16, 33, 31, 15, 16, 33, 15, 38, 37, 36, 14, 36, 16, 33, 33, 17, 33, 36, 38, 16, 38, 37, 16, 38, 14, 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15, 38, 39, 37, 32, 15, 39, 39, 39, 38, 39, 37, 38, 38, 38, 36, 36, 38, 16, 36, 33, 16, 38, 38, 37, 33, 32, 18, 34, 35, 33, 37, 37, 32, 32, 32, 32, 32, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKGSGAGLGKPGASVEMSCQAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 95, "max" : 145, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "TSWVPWGKPRPGPGLGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 94, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYPLS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFRDRATLTADKSSSTPYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 146, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "I*YINPSTGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKGSGAGLGKPGASVEMSCQASGYPLSTSWVPWGKPRPGPGLGWI*YINPSTGNTEYNQKFRDRATLTADKSSSTPYMQLSSLTSEDSAVYYCARGLRDWYFDVWGAGTTVTVST" } ] } ] }, { "sequence" : { "name" : "ERR346596.196 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16189:2002 (reversed)", "sequence" : "TGTGGATGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAACGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCACTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 37, 36, 38, 39, 38, 39, 39, 39, 36, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 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38, 39, 39, 39, 37, 39, 39, 39, 38, 38, 39, 37, 38, 39, 38, 38, 38, 38, 33, 37, 36, 37, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 35, 38, 38, 37, 38, 35, 37, 16, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 36, 36, 36, 32, 38, 38, 37, 34, 37, 33, 37, 37, 37, 37, 37, 37, 37, 32, 29, 29, 18, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKTNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKTNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.197 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19726:2003 (reversed)", "sequence" : "GAGAGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACTAAACCTCCAGCACAGCCTACATGGAGCACAGCAGCCTGCCCTCTGAGGACTCTGCGGTCTATTACTATGCAGGAAAAGTATGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCACTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 30, 32, 32, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 37, 39, 38, 39, 39, 39, 38, 39, 37, 39, 39, 38, 39, 37, 37, 35, 38, 39, 38, 39, 39, 38, 38, 38, 30, 36, 36, 38, 39, 37, 20, 37, 37, 33, 37, 33, 38, 39, 33, 20, 35, 33, 38, 37, 39, 39, 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"MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSD*TSSTAYMEHSSLPSEDSAVYYY" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGKVWYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "RNFTSLD" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-11*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-11" }, { "name" : "Source-Sequence", "value" : "X70200; X68844" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSD*TSSTAYMEHSSLPSEDSAVYYYAGKVWYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.249 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14531:2085 (reversed)", "sequence" : "ACTAGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCACATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAACAAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTAGGGACTACTGGGGTCAAGGAACCTCAGTCACTGTCTCCTCAGCCAAAACGAAACCCCCAGCTGCCCATCCCTTGCCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 33, 37, 32, 33, 37, 37, 38, 38, 38, 35, 38, 20, 38, 33, 37, 39, 39, 37, 39, 39, 37, 39, 39, 39, 38, 39, 34, 39, 38, 37, 38, 38, 39, 35, 37, 34, 37, 36, 30, 36, 16, 32, 36, 38, 38, 18, 33, 18, 33, 38, 34, 38, 39, 37, 39, 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33, 37, 15, 16, 38, 16, 17, 36, 39, 39, 38, 37, 30, 14, 36, 37, 16, 16, 16, 38, 36, 37, 38, 36, 34, 34, 36, 38, 16, 33, 33, 16, 16, 37, 33, 15, 15, 37, 14, 36, 33, 36, 32, 33, 14, 33, 33, 32, 15, 38, 38, 39, 38, 36, 35, 14, 15, 36, 15, 15, 15, 15, 16, 33, 15, 16, 34, 37, 34, 37, 16, 33, 16, 30, 32, 30, 37, 37, 32, 32, 29, 29, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGARDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSAHMSRLSISKDNSKSQVFFKTNSLQTDDTAMYYCARITTATGARDYWGQGTSVTVSS" } ] } ] }, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TQWVKQRPGQGLEWIGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQHRNLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DSTFDYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DS" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062147" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKASGYTFTGYWTQWVKQRPGQGLEWIGIIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQHRNLASEDSAVYYCARVFYDSTSAYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.15 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13725:1674 (reversed)", "sequence" : "CTGTCCGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATTCACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 29, 32, 16, 16, 16, 16, 29, 29, 29, 16, 16, 33, 37, 16, 33, 16, 16, 16, 16, 15, 35, 37, 16, 18, 15, 16, 15, 33, 33, 34, 15, 15, 37, 37, 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: "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "PVQLQQSGPELVKPGASVKISCKASGFTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.19 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12801:1681 (reversed)", "sequence" : "CCGGGAGGTACAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCAGTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGCAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCCGACTGAGCATCAACAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCCCTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 29, 16, 16, 16, 16, 16, 32, 16, 33, 18, 32, 16, 37, 38, 36, 16, 16, 35, 16, 32, 37, 36, 16, 33, 15, 16, 32, 32, 37, 33, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSINKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" 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"sequence" : { "name" : "ERR346596.37 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16287:1722 (reversed)", "sequence" : "CAGTGACGTGATGTTGGTGGAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCAGTGGGTAAAGCAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGCCAGGGGGACTAGGGCTCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 29, 32, 30, 33, 35, 32, 32, 32, 16, 33, 38, 37, 37, 37, 38, 36, 38, 16, 15, 38, 39, 38, 39, 37, 37, 37, 38, 38, 38, 38, 37, 39, 39, 39, 37, 15, 30, 36, 38, 37, 34, 38, 37, 38, 37, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 36, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 37, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 36, 37, 38, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 33, 38, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 37, 38, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 37, 38, 39, 37, 37, 33, 37, 37, 38, 39, 38, 38, 39, 39, 38, 38, 38, 37, 39, 37, 39, 37, 37, 38, 33, 15, 38, 38, 38, 39, 39, 38, 39, 38, 37, 38, 38, 37, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 34, 38, 37, 37, 38, 38, 38, 15, 39, 37, 38, 37, 38, 38, 37, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 36, 33, 37, 38, 39, 38, 39, 37, 38, 39, 39, 39, 39, 37, 29, 16, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 34, 38, 38, 38, 38, 37, 37, 37, 37, 38, 39, 38, 39, 38, 38, 39, 39, 38, 34, 37, 34, 37, 33, 14, 14, 14, 34, 38, 39, 39, 38, 37, 17, 37, 33, 14, 38, 39, 39, 36, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 38, 38, 31, 39, 38, 39, 38, 39, 39, 38, 36, 38, 38, 38, 38, 37, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 32, 32, 33, 33, 37, 37, 37, 33, 32, 30, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASQGD*GSFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCASQGD*GSFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.327 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18143:2183 (reversed)", "sequence" : "GGGGCAGGTTCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCACATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCCTTGGAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 33, 38, 19, 34, 39, 38, 37, 38, 39, 37, 39, 38, 39, 34, 39, 37, 39, 39, 38, 39, 38, 37, 38, 34, 36, 38, 38, 38, 38, 36, 37, 38, 18, 37, 18, 33, 34, 39, 39, 37, 38, 37, 39, 39, 39, 38, 39, 39, 37, 38, 33, 35, 18, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 38, 37, 37, 38, 38, 35, 19, 33, 38, 19, 33, 38, 39, 33, 38, 39, 37, 18, 37, 38, 37, 38, 33, 39, 35, 38, 19, 33, 37, 37, 39, 39, 39, 38, 37, 30, 31, 36, 32, 36, 38, 38, 38, 36, 38, 37, 38, 39, 14, 33, 33, 34, 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34, 16, 32, 31, 37, 35, 35, 32, 32, 32, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSAHMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : 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"TTTCCAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGCCAGGGGGACTATGGCTCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCTCATCCACTGTTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 17, 37, 39, 39, 39, 39, 35, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 38, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 36, 38, 39, 39, 39, 38, 38, 34, 37, 37, 37, 37, 38, 38, 39, 33, 38, 18, 37, 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"IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWGRQTPDKRLEWVATISSGGSNTYYPDNVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHQRYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.231 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20101:2050 (reversed)", "sequence" : "CGTACAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTAAGGATATCCTGCACGGCTTCTGGTTACTCATTCACTGACTACTTTATGAACTGGGTGATGCAGAACCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATCCTTTCTACAACCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAGATCCTCTAAGACAGCCCACATGGAACGCCGGAGCCTGGCAGCTGAGGACTCTGGAGTCTTTTATTGTGCAAGATCAGGGATTGGGTCTACTATGGACTTCTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 37, 38, 37, 37, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 34, 38, 39, 39, 36, 38, 39, 39, 37, 18, 37, 34, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 35, 39, 39, 38, 20, 32, 38, 36, 38, 18, 37, 38, 39, 39, 39, 39, 36, 18, 32, 37, 36, 36, 38, 39, 39, 39, 39, 39, 39, 36, 38, 39, 38, 35, 38, 39, 37, 31, 37, 38, 39, 18, 38, 38, 19, 37, 38, 39, 39, 38, 39, 39, 33, 37, 38, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 38, 36, 38, 37, 37, 39, 37, 38, 38, 37, 37, 18, 18, 36, 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32, 32, 35, 35, 33, 33, 33, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVMQNHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "FYNQKFKDKATLTVDRSSKTAHMERRSLAAEDSGVFYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPYNGDP" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGIGSTMDF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCTASGYSFTDYFMNWVMQNHGKSLEWIGRINPYNGDPFYNQKFKDKATLTVDRSSKTAHMERRSLAAEDSGVFYCARSGIGSTMDFWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.233 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17396:2051 (reversed)", "sequence" : "CGAAGAGGTCCAGCTGCAACAGTCTGGGGCTAAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATATAGGTACGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCCCTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 31, 33, 33, 32, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYRYDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAKLARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARYRYDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.237 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12297:2065 (reversed)", "sequence" : "ATCTGAGGTGCAGCGGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTTGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTTCATCCACTGATAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 30, 36, 38, 32, 37, 39, 39, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 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"DVMLVESGGDLVYPGGSLKLSCAASGFTFSSYGMSWVRQTPDTRLEWVATINSGGTNTYYPDSMKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCTRRGIYDERTAMDYWGRGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.71 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19080:1788 (reversed)", "sequence" : "AATCGAGGTGAAGCTGGTGGAGTCTGGGGGAGACCTAGTGTACCCTGGAGGGTCCCTAAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTTCCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACACGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGTACTAACACCTATTATCCAGACAGTATGAAGGGGCGATTCACCATCCCCCGAGACAATACCAAGAACACCCTATACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTATTACTGTACAAGACGGGGAACTTACGACGAGAGGACTGCTATGGACTACTGGGGTCGAGGAACCTCAGTCACCGTCTCCTCGGCTACAACAACAGCCCCATCGGCCCATCCATTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 32, 33, 33, 37, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGRGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGTYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : 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}, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : 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"QVQLQQSGDDLVKPGASVKLSCKTSGYTFTNYWINWIKQRPGQGLEWLGRIAPGSGSTYYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.165 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12899:1960 (reversed)", "sequence" : "CCAGGAGGTCCAGCTGCAGCAGTCTGGAGCTGGGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTGAGTAGAGTGTCATCGGAAGACTCTGCGGTCTATTTCTGTGCAAGACCCGAGTCTTATGGTAACTATTTGTACTTCGACTTCTGGGGCGCAGGGACCACGCTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCCTTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 33, 33, 33, 37, 37, 37, 36, 19, 38, 34, 19, 33, 37, 37, 38, 37, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 35, 38, 32, 37, 30, 30, 32, 38, 39, 33, 35, 38, 38, 20, 20, 37, 39, 39, 39, 36, 38, 39, 39, 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"min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAASGFTFSTYGMSWVRQTPDKRLEWVATINSGGSYTYYPDSVMGRFTISRDNAKNTLYLQMTSLKSEDTAMYYCTRRGRYDERTDMDYWGHGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.94 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17539:1835 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCGACAGCCTGACATCTGAGGACTCTGCACTCTATTACTGTGCACGATCCGACTATGGTTACTACTATTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCTTGGCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAYMQLDSLTSEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSDYGYYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : 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39, 36, 38, 37, 38, 39, 37, 38, 38, 37, 27, 27, 15, 38, 34, 30, 38, 34, 27, 16, 38, 37, 39, 38, 38, 17, 35, 29, 16, 30, 36, 39, 38, 37, 39, 34, 38, 38, 38, 38, 36, 32, 39, 37, 38, 35, 37, 37, 38, 38, 15, 36, 33, 37, 15, 14, 32, 37, 34, 36, 34, 34, 34, 36, 14, 38, 35, 32, 31, 16, 38, 38, 38, 36, 36, 37, 16, 32, 37, 29, 38, 36, 37, 32, 36, 16, 37, 38, 33, 38, 39, 38, 38, 39, 39, 39, 39, 38, 39, 36, 32, 32, 14, 38, 38, 39, 38, 38, 38, 33, 38, 38, 38, 38, 38, 37, 32, 32, 35, 35, 35, 35, 35, 32, 32, 32, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSGLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTSGYTFTNYWINWIKQRPGQGLEWLGRIAPGSGSTYYNEMFKVKAPLTVDTSSSTAYIQLSGLSSEDSAVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.361 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14347:2236 (reversed)", "sequence" : "CAAACAGGTTCAGCTTCAGCAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACCGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATATTACTACGGTAGTAGCTACGAGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCACTGGAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRTGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LVQLKQSGAELARPGASVKLSCKASGYTFTDYYINWVKQRTGQGLEWIGEIYPGSGNTYYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARSGDGYPRDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.217 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12428:2034 (reversed)", "sequence" : "GGGGGAGGTCCAGCTGCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGGCAGTACTTACTACAATGAAATGTTCAAGGGCAAGACAACACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGATGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTATTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTCCATCCCTTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 33, 33, 37, 37, 37, 37, 38, 38, 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : 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"INPYNDAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSHW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "EYDQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVDYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGHT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GGQGTSVTGAS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGNWEAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16204:1788 (reversed)", "sequence" : "TACAGAGGTGAAGTTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACGTCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGAATGGTAACAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCTATCCACTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 32, 32, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 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36, 37, 38, 38, 39, 36, 36, 36, 36, 38, 38, 38, 38, 38, 38, 37, 31, 37, 37, 37, 37, 37, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLNGNNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNLLESGPELVKPGASVKMSCKASGYTFTSYVMHWVEQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDRSSSTAYMELSSLTSEDSAVYYCAREGVDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.96 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16795:1844 (reversed)", "sequence" : "TGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAGGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGCTATGATGGCTCGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCCTTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 35, 38, 39, 37, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 36, 38, 37, 38, 38, 39, 38, 39, 38, 39, 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32, 33, 33, 37, 37, 37, 33, 32, 32, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNERFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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39, 39, 37, 39, 39, 39, 39, 37, 37, 37, 39, 39, 39, 39, 35, 38, 37, 34, 39, 39, 39, 38, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 17, 35, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 35, 37, 36, 38, 39, 38, 39, 39, 39, 37, 38, 36, 38, 36, 38, 38, 39, 37, 34, 36, 38, 38, 36, 33, 38, 39, 37, 39, 38, 39, 39, 33, 37, 37, 33, 37, 31, 37, 39, 38, 39, 38, 38, 34, 37, 38, 39, 38, 38, 15, 38, 37, 38, 38, 39, 38, 39, 33, 38, 16, 37, 32, 36, 38, 38, 37, 39, 37, 38, 39, 39, 38, 38, 35, 38, 39, 39, 37, 34, 35, 39, 39, 16, 35, 38, 29, 16, 31, 37, 35, 38, 39, 36, 37, 16, 37, 38, 37, 39, 38, 38, 38, 38, 38, 38, 39, 25, 28, 37, 23, 35, 12, 16, 27, 29, 38, 38, 39, 37, 16, 27, 38, 23, 38, 35, 15, 34, 34, 37, 38, 39, 38, 36, 24, 39, 39, 37, 36, 36, 36, 38, 38, 37, 37, 38, 35, 37, 25, 27, 37, 25, 39, 38, 29, 24, 34, 37, 37, 37, 39, 38, 26, 37, 38, 38, 38, 38, 38, 37, 38, 37, 37, 29, 26, 36, 38, 35, 37, 33, 16, 38, 37, 34, 15, 15, 15, 15, 16, 35, 37, 29, 35, 35, 33, 37, 38, 37, 33, 16, 27, 16, 37, 14, 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} ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFGRYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTAVNVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGANYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARFGRYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.205 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14364:2021 (reversed)", "sequence" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GCTFTSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSENSADYVC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"TACTCAGGTTCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGTTTTTGGCTTCAACATTAAATCCACCTATATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATGGGTTGATCCTGCGAATGGTAATAGTAAATGTGACCCGAGGTTCCAGGGCAAGGCCACTATAACAGCAGACTCATCTTCCAACACAGCCTACCTGCAGCTCAGCAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCTCCATTACGCCTACCAGTTTGACTACTGGGGCCAAGGCACCACTGTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCCTTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 39, 39, 38, 37, 32, 36, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 35, 37, 39, 39, 37, 36, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 39, 38, 37, 39, 38, 38, 32, 38, 37, 33, 39, 39, 39, 39, 39, 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33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTVF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKSTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VDPANGNS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"value" : "1" }, { "name" : "translation", "value" : "MHWVKQRPGQGLERIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLERIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.252 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20163:2089 (reversed)", "sequence" : "CNCGCAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTCTTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACGACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACGGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGCTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 2, 29, 16, 16, 32, 32, 35, 37, 33, 37, 37, 38, 38, 38, 38, 34, 16, 37, 33, 38, 38, 39, 39, 16, 37, 38, 37, 38, 39, 39, 39, 38, 39, 39, 39, 33, 38, 39, 34, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEPGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IDPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"value" : "EVQLQQSGAELVRSGASVRLSCTASGFNIKDYYMHWVKQRPEPGLEWIGWIDPENGDIVIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYCNRGMVTTNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14735:1645 (reversed)", "sequence" : "NAACCAGGTTCAGCTCCAGCAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACGATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGGGACTACGACTGGGTTCCGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGCTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 16, 29, 29, 29, 16, 16, 16, 33, 35, 35, 16, 18, 37, 38, 32, 32, 16, 32, 16, 16, 16, 35, 33, 37, 18, 15, 15, 32, 32, 37, 34, 16, 16, 33, 37, 34, 37, 39, 34, 16, 15, 32, 32, 36, 37, 14, 14, 15, 37, 37, 39, 39, 37, 16, 35, 38, 33, 16, 17, 16, 36, 38, 33, 38, 38, 34, 38, 37, 33, 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38, 37, 36, 36, 37, 37, 39, 39, 37, 39, 39, 38, 38, 37, 39, 38, 39, 39, 39, 37, 38, 33, 38, 37, 39, 37, 37, 37, 37, 34, 38, 39, 34, 38, 38, 38, 38, 38, 39, 39, 38, 36, 39, 38, 36, 36, 36, 38, 38, 39, 38, 37, 38, 34, 38, 38, 37, 38, 37, 34, 32, 31, 33, 33, 33, 37, 37, 32, 32, 29, 18, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRDYDWVPDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDYDWVPDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.321 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12986:2174 (reversed)", "sequence" : "GCTGGAGGTGAAGCTGATGGAGTCAGGGCCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGGGAGTACTACGGCTACGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCCCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGCCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 32, 37, 37, 33, 33, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 37, 38, 38, 38, 38, 38, 37, 37, 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29, 14, 36, 29, 14, 34, 39, 37, 37, 38, 32, 36, 38, 38, 39, 37, 36, 39, 35, 37, 38, 36, 38, 36, 37, 34, 36, 39, 39, 38, 35, 33, 36, 16, 36, 37, 15, 39, 38, 38, 31, 16, 37, 33, 14, 14, 36, 32, 32, 15, 33, 15, 32, 37, 16, 32, 14, 15, 39, 39, 37, 15, 39, 36, 36, 36, 32, 36, 38, 39, 38, 38, 37, 33, 37, 37, 32, 34, 38, 38, 32, 16, 35, 35, 16, 32, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVPA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSTTATFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARGSTTATFAYWGQGTLVTVPA" } ] } ] }, { "sequence" : { "name" : "ERR346596.324 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14303:2180 (reversed)", "sequence" : "CATAGAGGTGCAGCTGGTGGAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTCTACCTGGAAGTAGTAGTATTAACTACAATGAGAGTTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCGGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGATGGTTGTACGGTAGCTGCGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTCATCCCCTGGGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 37, 19, 32, 32, 37, 38, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 35, 39, 39, 39, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 33, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 37, 39, 38, 39, 38, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 33, 37, 32, 17, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] 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"ILPGSSSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWLYGSCAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"sequence" : { "name" : "ERR346596.326 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19072:2182 (reversed)", "sequence" : "GGGGCAGGTTCAGCTTCAGCAATCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGACGGTGTCCTGCCAGGGTTCTGGATACGCCTTCACTACTTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTACTTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTAGTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCCTTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 35, 32, 35, 37, 37, 37, 33, 33, 38, 38, 38, 38, 33, 38, 38, 37, 37, 37, 38, 39, 39, 35, 36, 34, 38, 38, 39, 19, 33, 38, 38, 38, 34, 39, 20, 20, 33, 33, 33, 38, 39, 17, 37, 32, 17, 38, 38, 38, 37, 20, 35, 38, 39, 20, 32, 32, 36, 38, 36, 36, 39, 39, 39, 39, 38, 16, 18, 33, 37, 35, 39, 39, 38, 39, 39, 39, 31, 38, 35, 38, 37, 37, 38, 38, 37, 37, 31, 37, 38, 19, 18, 33, 37, 19, 33, 37, 39, 37, 18, 37, 31, 19, 18, 33, 38, 38, 36, 39, 38, 18, 18, 33, 37, 37, 18, 37, 18, 30, 37, 36, 38, 39, 38, 39, 30, 38, 18, 14, 34, 34, 35, 38, 37, 39, 33, 30, 38, 37, 39, 38, 26, 31, 37, 37, 37, 33, 37, 38, 37, 37, 37, 38, 9, 2, 31, 37, 35, 38, 33, 37, 33, 34, 30, 30, 24, 30, 38, 34, 37, 37, 18, 34, 26, 33, 37, 33, 33, 38, 37, 33, 8, 29, 37, 33, 16, 37, 33, 27, 35, 35, 39, 23, 34, 28, 25, 34, 39, 39, 38, 27, 15, 34, 34, 26, 34, 12, 34, 26, 34, 38, 34, 21, 15, 39, 38, 38, 38, 39, 39, 38, 27, 26, 32, 34, 34, 33, 39, 38, 36, 37, 27, 29, 33, 16, 33, 37, 37, 37, 38, 35, 15, 39, 39, 36, 38, 38, 16, 39, 39, 37, 32, 38, 37, 15, 16, 16, 38, 31, 31, 17, 17, 17, 31, 31, 31, 17, 39, 39, 38, 33, 27, 14, 34, 30, 38, 37, 35, 37, 18, 30, 17, 38, 34, 38, 39, 38, 33, 39, 39, 38, 36, 36, 30, 36, 34, 19, 36, 36, 16, 38, 38, 39, 37, 37, 37, 39, 39, 39, 38, 19, 37, 38, 38, 33, 37, 38, 36, 35, 38, 38, 37, 37, 36, 39, 39, 38, 18, 38, 38, 39, 38, 39, 38, 39, 39, 37, 37, 38, 38, 35, 35, 37, 32, 36, 37, 32, 33, 16, 38, 39, 39, 36, 17, 38, 38, 37, 34, 38, 39, 38, 36, 38, 38, 38, 39, 37, 38, 38, 32, 37, 38, 37, 36, 37, 34, 37, 32, 33, 37, 37, 37, 33, 33, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVTVSCQGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTTYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAV*FC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVTVSCQGSGYAFTTYLIEWVKQRPGQGLEWIGVITSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAV*FCARAITDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.328 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12027:2184 (reversed)", "sequence" : "CTTGCAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCAGTAACTACTGGCTAGGTTGGTTAAAGCAGAGGCCTGGACATGGACTTGAGTGGATTGGAGATATTTACCCTGGAGGTCTTTATTCTAACTGCAATGACAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCTCTGCCTACATGCAGCTCAGTAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCAACTTGGGGTCCGTATTTTTTTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCGCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGCACG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 19, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 38, 39, 37, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 17, 37, 37, 39, 37, 37, 38, 39, 39, 36, 20, 37, 35, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 38, 39, 39, 37, 38, 38, 38, 33, 37, 37, 19, 37, 38, 38, 39, 38, 39, 37, 39, 39, 38, 39, 39, 38, 36, 38, 33, 18, 37, 37, 33, 33, 37, 38, 38, 38, 38, 37, 38, 36, 39, 15, 38, 34, 37, 38, 38, 33, 33, 33, 38, 18, 18, 37, 39, 37, 36, 33, 24, 38, 34, 39, 9, 29, 14, 19, 26, 3, 38, 39, 37, 35, 33, 38, 38, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 16, 31, 38, 33, 37, 38, 34, 16, 28, 37, 37, 37, 37, 28, 37, 29, 12, 37, 38, 38, 38, 39, 38, 38, 23, 38, 37, 35, 38, 38, 34, 27, 13, 34, 38, 38, 39, 38, 34, 34, 38, 34, 26, 38, 39, 39, 39, 38, 39, 38, 39, 37, 38, 26, 30, 37, 37, 39, 39, 39, 39, 39, 37, 38, 34, 39, 38, 39, 39, 24, 39, 39, 33, 38, 38, 38, 37, 37, 33, 38, 37, 30, 16, 39, 38, 39, 37, 16, 39, 39, 39, 39, 39, 37, 37, 39, 37, 35, 39, 39, 38, 31, 38, 17, 38, 38, 18, 39, 37, 39, 38, 38, 33, 17, 17, 37, 35, 38, 17, 39, 39, 39, 39, 37, 14, 36, 37, 36, 14, 34, 36, 34, 39, 38, 18, 30, 29, 14, 16, 30, 16, 16, 39, 37, 39, 38, 38, 38, 36, 16, 38, 36, 39, 38, 36, 38, 39, 39, 37, 39, 36, 37, 38, 38, 37, 37, 20, 38, 37, 39, 39, 38, 36, 36, 36, 32, 17, 36, 37, 37, 38, 39, 39, 36, 32, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 17, 34, 32, 32, 33, 33, 37, 37, 33, 33, 33, 32, 31, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LGWLKQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NCNDKFKGKATLTADTSSSSAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGGLYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTVAS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATWGPYFFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" 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"TTTACAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAACAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCATTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGGCAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGGGTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCACTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 37, 38, 38, 32, 38, 39, 39, 39, 39, 37, 38, 37, 33, 38, 39, 34, 38, 39, 38, 38, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 35, 38, 39, 33, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 37, 38, 39, 39, 37, 37, 39, 37, 35, 33, 38, 38, 39, 39, 39, 19, 37, 38, 38, 39, 38, 38, 39, 39, 33, 37, 37, 38, 39, 39, 39, 38, 30, 18, 37, 38, 38, 34, 39, 34, 37, 38, 36, 39, 39, 38, 38, 39, 34, 36, 38, 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37, 37, 37, 33, 32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSGKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INHYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"sequence" : "GAGAGAGGTTCAGCTTCAGCAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGTTGGGCTACATAAGCTACGACGGTAGCAATCACTACAACCCATCTCTCACAAATCGAGTCTCCATCACTCGTGACACATCTAAGAATCAGTTTTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCTACATATTACTGTGCAAGTGTGGAGGTACATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCCCTGCAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 18, 38, 33, 33, 38, 38, 37, 38, 37, 38, 37, 37, 38, 37, 36, 39, 39, 39, 39, 38, 39, 38, 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32, 33, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVKPSQSLSLTCSVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWLGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNPSLTNRVSITRDTSKNQFFLKLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISYDGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASVEVHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWLGYISYDGSNHYNPSLTNRVSITRDTSKNQFFLKLNSVTTEDTATYYCASVEVHAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.234 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16301:2053 (reversed)", "sequence" : "TGGTCAGGTTCAACTGCAGCAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTTTTCAATCACCAGCGATTATGCCTGGTACTGGATCCGGCCGCTTCCAGGAAATATACTGGAGTGGATGGGCTACATTAGCTATAGTGGTAACACTAGCTACAACCCATCTCTCAACAGTCGAATCTCTATCACTCAAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATACTTTGAAAACTGAGGACACAGCCACATATTACTGTGCAAGATATGATTACGACGGGGTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCTATCCACTGAACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 29, 16, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 33, 16, 32, 34, 38, 38, 39, 39, 37, 38, 38, 34, 36, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 34, 16, 16, 37, 38, 37, 38, 37, 37, 38, 37, 38, 36, 16, 16, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 15, 37, 39, 37, 39, 39, 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"ISYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDYDGVDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF PGNKLEWMGYMSYSGSTRYNPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-2" }, { "name" : "Videntity", "value" : "96,93% (284/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19894; J03832" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", 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"QVQLQQSGPGLVKPSQSLSLTCTVTGFSITSDYAWYWIRPLPGNILEWMGYISYSGNTSYNPSLNSRISITQDTSKNQFFLQLNTLKTEDTATYYCARYDYDGVDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.53 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16208:1745 (reversed)", "sequence" : "CGTACAGGTCCAGCTGCCGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACTTTATGAACTGGGTGAAGCAGAGCCATGGAGAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACGCTGCAGTCTATTATTGTGGAAGCTATGGTAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTCCATCCATTGACTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 32, 32, 16, 32, 37, 33, 37, 37, 37, 33, 36, 38, 38, 37, 38, 16, 16, 36, 36, 36, 38, 39, 39, 37, 37, 16, 37, 38, 37, 38, 15, 37, 16, 35, 37, 38, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 36, 34, 38, 38, 39, 39, 16, 37, 38, 39, 16, 37, 35, 16, 35, 32, 37, 38, 39, 39, 38, 37, 33, 32, 37, 37, 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39, 37, 39, 37, 38, 39, 36, 32, 15, 29, 29, 36, 38, 36, 38, 39, 37, 39, 37, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 36, 38, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 39, 37, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 33, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 37, 34, 32, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 35, 38, 37, 36, 39, 37, 38, 38, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 38, 38, 38, 39, 39, 38, 39, 37, 37, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 37, 38, 35, 33, 33, 38, 39, 39, 39, 38, 39, 39, 39, 38, 19, 39, 39, 39, 39, 37, 38, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 37, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 38, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 37, 38, 37, 38, 38, 39, 37, 38, 36, 37, 34, 38, 39, 38, 38, 39, 39, 38, 37, 38, 38, 38, 37, 38, 39, 38, 36, 36, 38, 38, 39, 38, 34, 37, 37, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPSLVKPSQTLSLTCSVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WNWIRKFPGNKLEYMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" 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"intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { 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"GCTACAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGTCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTATTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCTTGCCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 33, 33, 32, 35, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 32, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 20, 35, 38, 39, 38, 39, 39, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 37, 39, 38, 39, 39, 38, 36, 38, 35, 33, 31, 38, 38, 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38, 37, 36, 34, 19, 33, 33, 32, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKSGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% 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"value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKSGGSLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.97 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12520:1844 (reversed)", "sequence" : "GTAGGAGGTGAAGCTGATGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGATTACTACGGTAGTAGCTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCCCATCCCTTGGACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 29, 32, 33, 33, 37, 37, 34, 32, 32, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 36, 37, 38, 37, 38, 38, 38, 39, 37, 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38, 38, 38, 37, 32, 33, 33, 37, 37, 37, 33, 31, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.08%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARDYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.104 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13241:1854 (reversed)", "sequence" : "GGCCGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAGCCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCCCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCATTGATCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 33, 33, 33, 33, 33, 32, 32, 37, 37, 38, 38, 38, 38, 38, 19, 38, 38, 38, 38, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 36, 38, 36, 39, 37, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 37, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 39, 39, 39, 33, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13040:1984 (reversed)", "sequence" : "GTTACAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAATATTTATCCTTCTGCTAGTTATACTAACTACAAACAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAAGCGATGATTACTACGGAGGGGCCCCCTACTGGGGCCAAAGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGAGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 30, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 37, 33, 34, 36, 38, 36, 36, 34, 32, 39, 39, 37, 39, 39, 37, 34, 37, 37, 38, 38, 33, 37, 39, 36, 36, 17, 36, 38, 39, 20, 37, 35, 35, 35, 38, 38, 18, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 36, 36, 36, 39, 37, 17, 38, 37, 37, 39, 39, 36, 39, 39, 37, 33, 38, 39, 39, 18, 33, 38, 39, 38, 39, 39, 37, 39, 39, 36, 39, 33, 38, 19, 18, 38, 39, 39, 39, 39, 39, 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38, 37, 38, 37, 17, 37, 17, 36, 32, 17, 30, 38, 39, 38, 38, 38, 19, 36, 38, 38, 34, 36, 38, 31, 33, 37, 37, 35, 33, 20, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSASYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQSTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "TRSDDYYGGAPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.30%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSASYTNYKQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTRSDDYYGGAPYWGQSTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.186 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16129:1986 (reversed)", "sequence" : "TCAGGAGGTGAAGCTGATGGCGTCTGGGGCAGGGCTTGTGAAGCCAGGGGCCTCCGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGACCAGGGCCTGGCGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCTGTCTATTACTGTGCTAGAAATTACTACGGTAGTAGCTACTTTGACGACGGGGGCCAAGGCACCACTCTCACAGTCGCCTCAGCCAAAACGAAACCCCCATCGGTTCATCCATTGGCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 32, 32, 32, 37, 16, 16, 37, 38, 38, 35, 38, 35, 38, 16, 15, 36, 36, 36, 37, 15, 15, 15, 36, 30, 15, 15, 36, 38, 39, 39, 36, 39, 37, 17, 35, 38, 39, 36, 15, 37, 32, 14, 14, 32, 36, 37, 37, 14, 14, 37, 39, 32, 36, 38, 39, 39, 38, 39, 37, 37, 39, 39, 38, 33, 37, 38, 39, 37, 38, 39, 37, 38, 33, 35, 38, 38, 39, 29, 16, 33, 37, 16, 33, 38, 33, 33, 33, 37, 37, 39, 15, 38, 38, 39, 34, 39, 33, 38, 38, 37, 36, 38, 38, 38, 37, 36, 38, 32, 27, 37, 37, 39, 16, 33, 37, 38, 14, 33, 37, 37, 37, 38, 15, 37, 38, 38, 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16, 33, 33, 34, 33, 37, 33, 16, 34, 30, 32, 32, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMASGAGLVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQRPDQGLAWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GGQGTTLTVAS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNYYGSSYFDD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMASGAGLVKPGASVKLSCTASGFNIKDTYMHWVKQRPDQGLAWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARNYYGSSYFDDGGQGTTLTVAS" } ] } ] }, { "sequence" : { "name" : "ERR346596.194 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14969:2000 (reversed)", "sequence" : 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"EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARPSYYGHTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.254 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16222:2093 (reversed)", "sequence" : "CCTGGAAGTGAAGCTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCCCTGATGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 39, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"ERR346596.256 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17709:2099 (reversed)", "sequence" : "CGCTGAGGTTCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCTTATCCATTGTGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 37, 32, 37, 37, 37, 16, 38, 38, 38, 38, 38, 38, 38, 38, 16, 37, 38, 39, 39, 39, 39, 39, 38, 38, 15, 33, 32, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 37, 37, 37, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 37, 38, 37, 39, 33, 33, 38, 38, 37, 38, 39, 35, 38, 39, 39, 32, 38, 34, 38, 37, 38, 39, 39, 17, 38, 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37, 39, 39, 37, 15, 38, 38, 38, 37, 37, 39, 38, 32, 36, 38, 38, 39, 38, 37, 38, 37, 38, 37, 38, 36, 32, 38, 37, 37, 37, 37, 37, 33, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.121 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15127:1885 (reversed)", "sequence" : "AGTTCAGGTCCAACTGCAGCAGCCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCCATCCCTTGGGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 37, 38, 39, 38, 39, 39, 39, 37, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 37, 38, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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19, 38, 38, 37, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.126 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17869:1890 (reversed)", "sequence" : "CAGTGACGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTACAAAGGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGCTTATCCACTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 32, 32, 37, 37, 32, 32, 32, 16, 32, 37, 36, 38, 38, 38, 36, 37, 34, 37, 15, 33, 38, 38, 39, 39, 39, 38, 38, 32, 36, 34, 34, 38, 39, 33, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 15, 38, 34, 30, 37, 39, 38, 15, 38, 39, 39, 39, 16, 16, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 37, 38, 38, 17, 33, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 36, 31, 38, 30, 29, 38, 32, 37, 39, 39, 38, 38, 27, 33, 31, 39, 33, 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37, 19, 33, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQRSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.127 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13255:1892 (reversed)", "sequence" : "TGGAGACGTGATGCTGGTGGAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGAGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAACACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAAGGAGGGGTAACTGGGAGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCGCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCCTTGACGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 32, 30, 32, 34, 32, 32, 33, 33, 33, 37, 38, 38, 38, 38, 34, 38, 38, 38, 36, 19, 38, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 37, 36, 36, 38, 39, 39, 38, 39, 38, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 35, 36, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 33, 38, 39, 39, 37, 37, 39, 38, 37, 37, 39, 37, 39, 38, 39, 31, 37, 37, 38, 39, 18, 33, 38, 37, 19, 19, 37, 38, 39, 39, 38, 36, 37, 18, 30, 38, 37, 37, 38, 39, 37, 38, 38, 39, 38, 39, 38, 37, 37, 37, 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37, 37, 38, 37, 19, 37, 37, 37, 33, 37, 33, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRRTPDKRLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSRYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISFGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"CTGCGAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCCAGTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAACATTTATCCTTCTGAAAGTTATACTAACTACAATCACAATTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGCGATGGTTATTACGGAGGGGCCCCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTTCATCCATTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 33, 33, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 20, 38, 39, 38, 38, 39, 38, 39, 38, 38, 37, 38, 39, 39, 38, 38, 39, 39, 20, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 35, 38, 38, 36, 39, 36, 38, 36, 38, 38, 39, 38, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 35, 38, 37, 18, 37, 18, 38, 36, 38, 37, 39, 38, 38, 34, 39, 39, 39, 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"NAGGCAGGTTCAGCTGAAGGAGTCTGGGGCTGAGCTTGTGAAGCCTGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACTTTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAGTACTAAATATGACCAGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCGGAGGACACTGCCGTCTATTACGGTTCTCCTTATTCCTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCTATCCACTGAATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 16, 29, 16, 16, 16, 29, 16, 37, 16, 31, 16, 32, 36, 38, 16, 16, 16, 16, 16, 16, 32, 38, 36, 37, 18, 15, 33, 15, 15, 15, 32, 15, 37, 37, 38, 37, 33, 38, 37, 33, 17, 35, 37, 34, 16, 33, 36, 34, 36, 36, 32, 37, 37, 16, 37, 39, 16, 16, 32, 38, 32, 37, 33, 38, 37, 39, 39, 36, 33, 15, 16, 16, 15, 30, 36, 38, 36, 39, 39, 39, 39, 39, 37, 37, 16, 16, 16, 17, 33, 33, 17, 17, 16, 33, 16, 33, 15, 33, 30, 37, 16, 33, 16, 37, 38, 37, 17, 38, 37, 37, 37, 38, 38, 37, 36, 38, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 38, 15, 37, 38, 39, 15, 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"[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AVQLQESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARYATATYWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.23 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17683:1698 (reversed)", "sequence" : "TTTAGATGTGCAACTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTATTATCTAGACAGTGTGAAGGGGCGATTCACCATTTCCAGAGACAATGCCAAGAACACCCTATACCTGCAAATGAGCAGTCTGAGCTCTGAGGACACGGCCATGTATTACTGTGCAAGGCCTTCCTACTATGGTCATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGTTCATCCCTTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 29, 29, 16, 33, 31, 37, 16, 35, 18, 16, 33, 38, 37, 33, 38, 16, 16, 16, 32, 37, 37, 38, 37, 37, 37, 30, 15, 15, 15, 15, 32, 37, 37, 32, 16, 37, 33, 17, 17, 37, 38, 37, 39, 37, 32, 15, 32, 14, 32, 37, 38, 36, 37, 38, 37, 15, 16, 16, 32, 37, 38, 39, 39, 39, 39, 37, 38, 37, 36, 35, 37, 39, 37, 38, 39, 39, 37, 39, 33, 37, 38, 38, 16, 37, 38, 39, 39, 37, 33, 37, 39, 17, 37, 37, 39, 33, 38, 39, 38, 39, 16, 37, 38, 39, 37, 39, 39, 37, 37, 38, 38, 37, 39, 38, 38, 37, 36, 36, 32, 34, 38, 38, 37, 38, 38, 30, 34, 14, 33, 33, 16, 37, 36, 38, 39, 39, 38, 37, 38, 39, 39, 37, 39, 38, 38, 38, 34, 38, 34, 34, 39, 37, 38, 39, 16, 37, 38, 38, 39, 39, 39, 39, 38, 36, 38, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 37, 37, 38, 38, 38, 38, 38, 38, 35, 32, 36, 24, 38, 34, 37, 37, 37, 37, 37, 38, 38, 33, 37, 38, 37, 37, 39, 39, 37, 37, 37, 38, 38, 27, 35, 36, 34, 34, 38, 37, 37, 39, 37, 37, 39, 37, 39, 37, 37, 37, 37, 38, 38, 37, 35, 38, 39, 39, 39, 34, 37, 16, 27, 39, 38, 39, 39, 39, 38, 33, 39, 37, 38, 39, 38, 39, 37, 36, 38, 38, 39, 39, 39, 38, 39, 39, 33, 37, 39, 37, 39, 38, 38, 38, 38, 39, 39, 39, 37, 36, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 31, 16, 38, 37, 38, 36, 39, 39, 39, 37, 39, 38, 37, 37, 38, 36, 36, 34, 37, 38, 33, 35, 38, 35, 39, 38, 36, 38, 39, 38, 39, 34, 39, 39, 37, 38, 39, 38, 38, 37, 37, 34, 36, 36, 34, 38, 32, 38, 37, 39, 39, 33, 39, 37, 39, 39, 39, 39, 39, 36, 38, 38, 38, 36, 34, 38, 38, 36, 38, 38, 38, 37, 16, 36, 37, 32, 32, 32, 37, 37, 32, 32, 32, 32, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYLDSVKGRFTISRDNAKNTLYLQMSSLSSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPSYYGHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGDLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYLDSVKGRFTISRDNAKNTLYLQMSSLSSEDTAMYYCARPSYYGHAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.27 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16606:1703 (reversed)", "sequence" : "GGGGGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCGTTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCCGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCACTGCGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 30, 30, 16, 29, 30, 32, 37, 37, 33, 36, 36, 38, 37, 33, 15, 34, 34, 15, 37, 38, 34, 38, 37, 34, 16, 37, 37, 37, 38, 34, 38, 39, 38, 38, 34, 39, 39, 33, 33, 37, 38, 39, 38, 38, 36, 32, 36, 38, 38, 39, 39, 16, 38, 39, 39, 33, 17, 37, 39, 39, 33, 37, 38, 39, 39, 39, 37, 33, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 38, 39, 38, 39, 37, 38, 38, 39, 38, 38, 39, 38, 37, 39, 39, 39, 36, 33, 37, 39, 33, 37, 38, 39, 39, 39, 39, 38, 38, 38, 33, 37, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 16, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 25, 39, 37, 39, 38, 38, 23, 39, 38, 39, 39, 38, 38, 39, 39, 38, 38, 38, 37, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 35, 38, 37, 38, 37, 38, 38, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 37, 38, 17, 37, 38, 39, 39, 32, 38, 39, 39, 37, 39, 39, 39, 36, 39, 38, 33, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 34, 38, 39, 39, 38, 38, 34, 38, 38, 38, 39, 39, 39, 38, 38, 39, 37, 39, 37, 39, 37, 35, 38, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 36, 37, 17, 33, 17, 38, 39, 39, 34, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 37, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.29 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12793:1704 (reversed)", "sequence" : "TTCCCAGGTCCACGTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCCGCTTATTACTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTCCATCCATTGCCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 29, 32, 18, 19, 34, 30, 37, 37, 37, 33, 37, 36, 38, 34, 32, 34, 38, 34, 19, 37, 38, 37, 39, 39, 34, 39, 34, 35, 17, 17, 17, 33, 37, 38, 39, 37, 39, 34, 37, 20, 37, 38, 39, 33, 37, 39, 38, 34, 38, 38, 37, 39, 18, 37, 39, 37, 18, 20, 37, 38, 38, 38, 39, 36, 37, 39, 37, 37, 17, 38, 31, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 18, 37, 38, 33, 33, 38, 37, 38, 35, 37, 37, 39, 33, 37, 30, 37, 31, 37, 33, 37, 39, 39, 19, 38, 38, 39, 39, 39, 39, 38, 36, 35, 38, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 38, 37, 39, 39, 38, 39, 36, 35, 38, 37, 38, 38, 33, 37, 39, 39, 38, 16, 37, 38, 39, 38, 38, 37, 37, 35, 37, 38, 39, 37, 37, 37, 37, 38, 38, 39, 34, 31, 37, 37, 34, 38, 39, 33, 38, 37, 38, 37, 34, 37, 35, 39, 37, 38, 39, 39, 39, 35, 39, 37, 38, 38, 38, 38, 38, 38, 39, 38, 37, 34, 39, 38, 38, 38, 34, 34, 34, 36, 38, 38, 34, 33, 37, 39, 39, 39, 39, 39, 38, 39, 37, 38, 38, 35, 30, 24, 33, 2, 26, 32, 37, 26, 36, 39, 38, 38, 38, 37, 37, 39, 39, 37, 35, 37, 37, 39, 39, 39, 39, 37, 39, 37, 37, 38, 37, 39, 38, 37, 37, 38, 15, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 37, 39, 39, 39, 38, 36, 36, 38, 38, 39, 39, 39, 39, 39, 37, 37, 39, 37, 39, 39, 39, 37, 37, 38, 35, 37, 20, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 38, 37, 39, 39, 37, 39, 39, 38, 33, 39, 37, 38, 35, 33, 18, 37, 38, 39, 39, 36, 17, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 37, 38, 36, 34, 32, 37, 34, 37, 33, 37, 37, 37, 18, 33, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AAYYYGSSQFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAAYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.329 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15184:2187 (reversed)", "sequence" : "GGGTGAGGTTCAGCTTCAGCAGTTTGGGGCTGAGGTTGTGAAGCCTGGGGCCTCAGTGAAGTTGTCCTGCACGGCTTCTGGCTTCAATTTTAACGAGACCTAGATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAGTTCTAAATATGATGCGAAGTTCCAGGGCAAGGCCACTATGACAGTAGACACATCCTCCAGCACAGCCTACCTGCAGCACAGCAGCCTGACATCTGAGGACACTGCCGTCTATGCCGGCGCTATCTATTAAAGATGGGACAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACAGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCCCTGTACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 32, 16, 29, 32, 37, 37, 37, 34, 37, 37, 37, 38, 38, 16, 38, 38, 37, 16, 33, 38, 39, 18, 37, 38, 38, 38, 38, 38, 15, 36, 38, 39, 15, 37, 15, 37, 37, 36, 39, 39, 16, 38, 39, 16, 38, 39, 38, 38, 38, 14, 37, 38, 39, 39, 39, 17, 37, 39, 39, 17, 37, 39, 39, 39, 39, 39, 39, 39, 39, 16, 14, 36, 36, 38, 38, 39, 39, 39, 39, 39, 39, 34, 38, 39, 37, 17, 17, 33, 17, 33, 31, 16, 14, 29, 14, 14, 29, 30, 37, 16, 16, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 38, 39, 38, 15, 16, 33, 37, 27, 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16, 16, 37, 32, 32, 35, 32, 16, 35, 33, 29, 16, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQFGAEVVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNFNET*" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDAKFQGKATMTVDTSSSTAYLQHSSLTSEDTAVYAG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGSS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIY*RWDSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQFGAEVVKPGASVKLSCTASGFNFNET*MHWVKQRPEQGLEWIGRIDPANGSSKYDAKFQGKATMTVDTSSSTAYLQHSSLTSEDTAVYAGAIY*RWDSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.216 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17160:2034 (reversed)", "sequence" : "GGGGGAGGTCCAGCTGCAACAGTCCATCCCCATCAGCCCATCCCCTGCCTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAGGAAAGAAGGCTGGTGAGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGGGAAGGGGCGATTAACCATCTACAGAGACAATGACAATAATAACCTGTACCTGCAAATGAGTAGTCTGACGTCTGCGGACACAGCTTTTTTTTTTAATGAGACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGGGGGAGGTCCAGCTGCAACAGTCCATCCCCATCAGCCCATCCCCTGCCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 30, 35, 35, 33, 33, 33, 37, 37, 38, 38, 38, 38, 19, 37, 37, 34, 38, 38, 39, 39, 37, 37, 38, 33, 37, 32, 36, 17, 37, 39, 35, 38, 32, 34, 36, 36, 18, 33, 37, 38, 38, 39, 38, 37, 38, 38, 39, 33, 38, 35, 37, 39, 39, 38, 38, 38, 30, 16, 38, 39, 37, 39, 37, 36, 36, 39, 34, 30, 37, 20, 37, 38, 39, 39, 37, 31, 33, 33, 31, 18, 38, 38, 38, 39, 39, 35, 39, 36, 31, 30, 16, 16, 33, 37, 34, 37, 16, 37, 37, 37, 33, 14, 36, 29, 37, 38, 19, 19, 30, 19, 38, 37, 38, 15, 18, 30, 18, 30, 34, 14, 14, 29, 14, 14, 15, 31, 30, 15, 15, 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"[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSNLTSKNTAAYYCANPSFYYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.76 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14395:1794 (reversed)", "sequence" : "CGGGGAAGTGATGCTGGTAGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCACCTTCTGGGTTCACCTTCACTGATTACTACATGCGCTGGGTCCGCCAGCCTCCAGGACAGGCCCTTGAGTGGTTGGGTTTTATTAGACACACAGCTAATGGTTACACAACCGAGTCCAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTGCAAAGGAACACCCGGAGAGCGGAGGACAGTGCCACTTATGACTGTGCAAGAGATAATGGTAACTACGATTACTATGCTATGGACTACTGGGGGCAAGGAACCTCAGTCACCGTCTCCGCAGCCAAAACAACACCCCCATCAGCCCATCCACTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 29, 29, 32, 29, 16, 16, 34, 37, 37, 35, 38, 38, 38, 38, 16, 37, 16, 33, 32, 37, 37, 38, 37, 37, 37, 16, 37, 36, 38, 38, 37, 34, 38, 38, 15, 37, 39, 35, 38, 35, 36, 39, 37, 37, 38, 37, 38, 34, 38, 36, 36, 37, 38, 35, 38, 38, 35, 37, 35, 34, 37, 36, 38, 37, 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38, 39, 38, 36, 15, 38, 37, 37, 17, 17, 35, 37, 17, 31, 37, 16, 38, 37, 35, 39, 38, 33, 37, 36, 38, 36, 39, 37, 39, 38, 39, 38, 35, 37, 38, 32, 37, 37, 33, 16, 37, 16, 35, 33, 38, 37, 37, 16, 36, 14, 36, 33, 38, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 36, 36, 36, 38, 38, 39, 38, 37, 36, 36, 36, 32, 33, 16, 38, 37, 37, 37, 37, 37, 18, 37, 37, 32, 16, 16, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNETFKGKATLTVDTSSTTAYIQPSSLSSEDSAFYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "54" }, { "name" : "Source-Identity", "value" : "81.63%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGDDLVKPGASVKLSCKASGYTFTSYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKATLTVDTSSSTAYIQLSSLSSEDSAVYFCARFPFYYGSSFYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.124 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13499:1888 (reversed)", "sequence" : "AAAACAGGTCCAGCTGCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATATAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCTCATCCACTGTTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 32, 33, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 34, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"CGAACAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACAAATTCACTGACTATGAGATGCACTGGGTGAAACAGACACCTGTGCATGGCCTGGAATGGATTGGATCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAACTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCACCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGAGAAGGGATCTACTTTGGTTACGACGTACCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCTTGCTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 32, 33, 33, 34, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 38, 39, 37, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 16, 37, 37, 38, 38, 38, 33, 38, 38, 39, 38, 38, 39, 37, 38, 35, 36, 16, 37, 35, 36, 39, 38, 39, 33, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 38, 39, 38, 35, 38, 38, 39, 38, 38, 38, 38, 37, 36, 39, 38, 39, 38, 39, 38, 38, 39, 33, 38, 37, 38, 38, 37, 37, 23, 38, 24, 38, 37, 37, 35, 34, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 35, 37, 35, 38, 39, 38, 39, 39, 39, 37, 32, 12, 31, 12, 37, 37, 39, 39, 38, 38, 39, 39, 39, 39, 37, 33, 38, 37, 39, 39, 37, 38, 38, 30, 14, 14, 29, 37, 35, 34, 38, 37, 18, 33, 37, 18, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 35, 35, 33, 37, 14, 38, 39, 39, 36, 36, 39, 38, 37, 39, 39, 37, 39, 39, 38, 38, 39, 39, 37, 37, 37, 39, 38, 37, 37, 34, 36, 16, 36, 34, 37, 36, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 38, 38, 34, 34, 34, 37, 39, 39, 38, 37, 38, 38, 38, 37, 36, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 36, 37, 32, 33, 33, 37, 37, 37, 33, 33, 32, 29, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVTLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYKFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQNFKGKATLTADRSSTTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TREGIYFGYDVPMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "91.38%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVTLSCKASGYKFTDYEMHWVKQTPVHGLEWIGSIDPETGGTAYNQNFKGKATLTADRSSTTAYMELRSLTSEDSAVYYCTREGIYFGYDVPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12997:1642 (reversed)", "sequence" : "NCAGGAAGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCATGGTGGTGGTACCACCTACTATTCAGACACTGTGAAGGGCCGATTCACCATCTCCAAAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATTTATTACTGTACAAGACATGGTGGTTACTACCCTTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCCCAGCCAAAACAACACCCCCATCGGTCTATCCCCTGTGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 16, 16, 16, 16, 16, 33, 16, 18, 33, 33, 33, 37, 18, 16, 32, 16, 16, 16, 32, 37, 37, 37, 35, 33, 37, 34, 30, 15, 15, 14, 14, 14, 37, 16, 33, 38, 16, 36, 35, 38, 38, 39, 38, 37, 36, 15, 15, 14, 14, 36, 37, 36, 36, 38, 33, 15, 16, 33, 16, 35, 34, 39, 39, 37, 39, 39, 35, 37, 37, 38, 39, 38, 14, 37, 38, 39, 39, 38, 35, 38, 38, 37, 36, 36, 36, 39, 38, 33, 37, 38, 39, 39, 39, 37, 39, 17, 33, 35, 37, 35, 37, 38, 39, 38, 38, 36, 38, 39, 39, 39, 38, 37, 38, 38, 34, 36, 36, 33, 37, 36, 38, 39, 37, 34, 38, 34, 34, 30, 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38, 38, 38, 39, 38, 36, 37, 36, 36, 38, 37, 37, 38, 34, 33, 32, 33, 33, 33, 37, 37, 33, 32, 32, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYSDTVKGRFTISKDNAKNTLYLQMSSLKSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISHGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSP" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRHGGYYPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISKDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSP" } ] } ] }, { "sequence" : { "name" : "ERR346596.38 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14605:1722 (reversed)", "sequence" : "TGGCCAGGTGCAGCTGAAGGAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGAAACGGCCCTTCATTACTACGGCTACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTCCATCCACTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 16, 16, 16, 29, 16, 37, 37, 37, 16, 33, 37, 38, 38, 37, 16, 16, 33, 16, 32, 37, 37, 38, 37, 37, 37, 36, 34, 36, 30, 15, 32, 37, 38, 35, 15, 34, 15, 16, 15, 15, 33, 36, 37, 33, 37, 37, 38, 37, 32, 37, 38, 16, 38, 39, 39, 16, 37, 37, 37, 38, 37, 39, 38, 37, 39, 37, 39, 15, 37, 38, 36, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 37, 16, 37, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 17, 37, 38, 39, 39, 15, 37, 36, 39, 33, 39, 38, 38, 39, 39, 39, 39, 39, 36, 33, 39, 39, 39, 33, 39, 34, 37, 37, 39, 38, 39, 33, 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36, 36, 38, 38, 39, 38, 37, 37, 37, 38, 38, 37, 33, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARETALHYYGYWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" 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"CCGTGAGGTGATGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGGTCTACTATGGTAACCCCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCCTTGGCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 33, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 20, 33, 36, 17, 36, 36, 32, 37, 38, 38, 38, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 37, 33, 38, 39, 33, 37, 20, 37, 38, 36, 35, 37, 38, 38, 39, 33, 38, 20, 33, 20, 37, 38, 39, 39, 38, 39, 39, 37, 39, 36, 36, 18, 37, 39, 38, 39, 38, 37, 38, 39, 37, 33, 37, 38, 39, 37, 38, 35, 39, 39, 39, 38, 18, 18, 18, 37, 39, 39, 38, 39, 38, 39, 36, 30, 37, 37, 36, 37, 34, 33, 38, 39, 33, 38, 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39, 39, 36, 32, 39, 39, 39, 39, 39, 38, 38, 38, 38, 34, 38, 39, 38, 38, 38, 37, 38, 38, 38, 37, 37, 16, 37, 32, 32, 32, 32, 32, 32, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVYYGNPYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGVYYGNPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.130 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15138:1903 (reversed)", "sequence" : "GGCGGCAAGTTGCCATACAAAACAGGGTCGCCAGCAATATCGGTATAAGTCAAAGCACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCGGAAAACGAACAAGCGCAAGAGTAAACATAGTGCCATGCTCAGGAACAAAGAAACGCGGCACAGAATGTTTATAGGTCTGTTGAACACGACCAGAAAACTGGCCTAACGACGTTTGGTCAGTTCCATCAACATCATAGCCAGATGCCCAGAGATTAGAGCGCATGACAAGTAAAGGACGGTTGTCAGCGTCATAAGAGGTTTTACCTCCAAATGAAGAAATAACATCATGGTAACGCTGCATGAAGTAATCACGTTCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 37, 37, 37, 33, 38, 20, 38, 38, 37, 32, 19, 33, 33, 37, 32, 37, 39, 38, 34, 37, 36, 34, 36, 38, 38, 38, 33, 36, 38, 37, 39, 39, 36, 38, 36, 39, 37, 38, 37, 38, 39, 39, 37, 35, 36, 37, 37, 36, 38, 39, 39, 39, 39, 35, 38, 36, 36, 36, 38, 32, 37, 38, 33, 35, 31, 37, 37, 38, 33, 18, 38, 38, 38, 38, 39, 39, 39, 39, 37, 38, 33, 36, 36, 38, 36, 36, 39, 39, 38, 39, 36, 38, 38, 36, 38, 37, 38, 34, 37, 38, 37, 35, 33, 38, 36, 36, 38, 38, 38, 38, 37, 38, 34, 37, 37, 38, 39, 37, 25, 38, 38, 37, 37, 38, 39, 37, 38, 34, 37, 37, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "QVAIQNRVASNIGISQSTFSVKVL" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 94, "max" : 144, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VGGKRTSARVNIVPCSG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 78, "max" : 93, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 294, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYY*" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISCYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 183, "max" : 293, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TTHLSKNRISITRETSKNQFFLRLNSVTTEDTATYYW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 182, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 330, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"QVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARVRNWADYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.285 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13149:2143 (reversed)", "sequence" : "CGCGGACGTGATGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCTCTTGCACTGTCTCTGGGTTTTCATTAAACAACTATGGTGTTCATTGGGTTCGCCAACCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATTTGGGCTGGTGGAGGCACAAATTATAATTCGACTCTCATGTCCAGACTGAGTGTCATCAAAGACAATTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTATTATTGTGTCTCAGAATTGGGGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCGCTGCAGCTACAACAACAGCCCCATCAGCCTATCCACTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 34, 34, 34, 33, 33, 34, 34, 34, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 38, 37, 39, 37, 38, 37, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 33, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 36, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 30, 33, 38, 36, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 37, 38, 34, 36, 35, 39, 39, 36, 38, 37, 37, 30, 38, 38, 38, 39, 38, 39, 37, 38, 39, 39, 38, 39, 39, 39, 38, 32, 38, 38, 38, 38, 34, 22, 36, 39, 39, 39, 39, 39, 38, 37, 38, 32, 38, 38, 38, 38, 39, 38, 36, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 38, 37, 38, 14, 26, 33, 37, 39, 39, 38, 39, 38, 37, 39, 35, 37, 38, 36, 37, 37, 37, 37, 33, 37, 38, 38, 38, 37, 39, 39, 39, 39, 37, 39, 37, 38, 38, 38, 38, 39, 39, 38, 37, 26, 34, 36, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 37, 37, 37, 37, 39, 35, 39, 38, 32, 37, 37, 37, 38, 38, 39, 38, 33, 33, 17, 37, 37, 17, 38, 38, 39, 37, 37, 15, 32, 33, 37, 36, 38, 39, 39, 39, 38, 39, 38, 37, 15, 39, 37, 38, 37, 37, 35, 35, 39, 39, 39, 38, 36, 36, 30, 38, 38, 38, 38, 38, 39, 39, 38, 37, 37, 20, 33, 37, 39, 36, 35, 34, 37, 38, 38, 39, 39, 39, 38, 33, 37, 33, 39, 38, 36, 37, 37, 38, 20, 38, 36, 18, 36, 34, 36, 36, 32, 18, 38, 18, 37, 39, 37, 32, 20, 20, 33, 17, 39, 39, 39, 38, 39, 38, 36, 30, 37, 39, 38, 38, 38, 38, 38, 38, 37, 38, 37, 38, 34, 19, 37, 37, 37, 31, 33, 33, 33, 31, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSISCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLNNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSTLMSRLSVIKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVAA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSELGGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WGRYYFDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WG" }, { "name" : "IMGT_allele", "value" : "IGHD3-16*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-16" }, { "name" : "Source-Sequence", "value" : "AF062153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSISCTVSGFSLNNYGVHWVRQPPGKGLEWLGVIWAGGGTNYNSTLMSRLSVIKDNSKSQVFLKMNSLQTDDTAMYYCVSELGGFAYWGQGTLVTVAA" } ] } ] }, { "sequence" : { "name" : "ERR346596.286 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19551:2143 (reversed)", "sequence" : "GAGGGAGGTGCAGCTGCAGCAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAATATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAAACATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAACGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACAATATGGTAACTTCGGAGTTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 37, 36, 38, 38, 39, 39, 39, 39, 37, 37, 38, 39, 37, 37, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 37, 37, 37, 34, 36, 34, 38, 39, 38, 39, 39, 39, 36, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 39, 37, 39, 39, 36, 37, 36, 36, 36, 37, 36, 34, 37, 37, 37, 37, 38, 37, 34, 35, 37, 39, 39, 38, 37, 37, 39, 37, 38, 39, 38, 37, 37, 17, 37, 36, 38, 32, 37, 27, 14, 33, 37, 38, 37, 38, 39, 39, 37, 37, 37, 37, 39, 37, 39, 37, 39, 38, 38, 38, 38, 35, 37, 35, 35, 38, 38, 37, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 36, 37, 37, 32, 36, 37, 37, 39, 37, 39, 39, 39, 37, 39, 39, 37, 39, 39, 37, 38, 39, 39, 39, 37, 36, 35, 33, 37, 38, 37, 36, 39, 39, 39, 39, 38, 33, 23, 26, 38, 37, 37, 38, 39, 39, 39, 39, 38, 39, 37, 39, 37, 37, 38, 35, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 33, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 32, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 33, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 37, 37, 39, 39, 39, 39, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 37, 36, 36, 38, 38, 38, 38, 38, 36, 38, 37, 37, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 37, 38, 38, 38, 38, 39, 38, 38, 38, 37, 36, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 32, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSKYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQYGNFGVMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGDLVKPGGSLKLSCAASGFTFSKYGMSWVRQTPDKRLEWVANISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARQYGNFGVMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.287 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18946:2145 (reversed)", "sequence" : "GTGTGAGGTCCAGCTTCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCACCTACTATATGTACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAACAATGGTGGTACTAACTTCAAAGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGACGCACCTGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCCTTGTTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 37, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTTYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRTWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKLSCKASGYTFTTYYMYWVKQRPGQGLEWIGEINPNNGGTNFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRGRTWDFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.288 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36, 30, 36, 29, 37, 39, 38, 38, 36, 15, 36, 32, 16, 37, 37, 16, 37, 16, 35, 37, 37, 15, 17, 39, 39, 35, 39, 39, 38, 37, 36, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 33, 19, 36, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGAGTTVTGSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVYYGNPYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGVYYGNPYWYFDVWGAGTTVTGSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.289 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"EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"ERR346596.300 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17229:2159 (reversed)", "sequence" : "AGTAGAGGTGCAGCTGGTGGAGTCTGGTGGAGGCTTGGTGCAGCCTACAGGGTCATTGACACTCTCATGTGCAGCCTCTGGATTCACCTTCAATACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAAGTATGCAACATATTATGCCGATTCAGTGAAAGACAGGTTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTGTGAGACATGAGGTTATGATTACCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCAAAAACAACACCCCCATCTGCTTATCCCCTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 32, 32, 20, 35, 37, 37, 30, 37, 37, 38, 38, 38, 38, 33, 37, 38, 34, 38, 38, 39, 39, 39, 39, 39, 37, 38, 32, 19, 37, 36, 17, 32, 37, 36, 32, 39, 37, 39, 18, 37, 39, 39, 37, 37, 17, 32, 18, 33, 37, 33, 18, 33, 32, 37, 38, 20, 20, 20, 33, 33, 38, 35, 38, 18, 35, 38, 36, 38, 37, 36, 39, 33, 38, 38, 39, 39, 39, 39, 35, 37, 38, 33, 20, 35, 31, 37, 38, 38, 37, 18, 33, 19, 33, 38, 38, 19, 18, 30, 36, 31, 30, 30, 33, 18, 33, 37, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFNTYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRSKSNKYAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRHEVMITFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP GKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVY YCTT" }, { "name" : "IMGT_allele", "value" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPTGSLTLSCAASGFTFNTYAMNWVRQAPGKGLEWVARIRSKSNKYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRHEVMITFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.260 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14558:2101 (reversed)", "sequence" : "AGAGCAGGTCCACGTGAAGCAGTCTGGAGCCGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGTTACTGGATAGAGTGGATTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGTTACTACTAACTACAATGGGAGGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGAGATCATTTTGACTACTGGGGCCCAGGCACCACTCTCACAGTCTCTTCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGGCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 37, 37, 32, 37, 16, 35, 37, 37, 16, 38, 34, 38, 38, 37, 38, 38, 38, 39, 39, 39, 38, 39, 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"value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "AF273886" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVQPGGSMKLSCVASGLTFSNYWMNWVRQSPEKGLEWVAEIRLKSHNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTTGFSYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.264 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15144:2104 (reversed)", "sequence" : 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(reversed)", "sequence" : "GGGGGAGGTGCAGCTGCAGCAGTCTGGGGCAGAGCTTGCGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAAACCCTCTTTTTACTACGGTAGTAGTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCCTGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 32, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 37, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 37, 38, 38, 36, 37, 32, 33, 33, 33, 33, 37, 37, 37, 33, 32, 32, 18, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TKPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTKPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.402 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16644:2294 (reversed)", "sequence" : "AGAGGAGGTGCAGCTGCAGGAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGTCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTGCTGTGCAAGACACAAGTGGGCTATGGACTACTGGGGCCAAGGAACCACAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCTTGAAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 16, 16, 29, 34, 32, 32, 32, 16, 34, 37, 38, 38, 38, 16, 33, 38, 38, 32, 37, 37, 39, 39, 39, 39, 39, 16, 15, 33, 32, 37, 37, 32, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 14, 37, 38, 34, 38, 38, 35, 38, 38, 39, 16, 38, 32, 38, 39, 39, 39, 39, 39, 39, 35, 32, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 39, 37, 15, 34, 37, 38, 16, 37, 16, 33, 16, 29, 37, 34, 16, 37, 38, 33, 38, 39, 39, 17, 37, 38, 16, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 36, 38, 37, 39, 38, 34, 38, 39, 39, 38, 38, 38, 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16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYCC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHKWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.08%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYCCARHKWAMDYWGQGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.404 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19188:2296 (reversed)", "sequence" : "TGAACAGGTTCAACTGCAGCAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGGCTTTATTACTACGGTAGTAGCTCAAACGTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCTTATCCACTGGGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 19, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 34, 39, 38, 34, 34, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 19, 37, 38, 39, 38, 39, 39, 39, 38, 36, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 38, 36, 37, 39, 38, 39, 37, 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"sequence" : "NCCACAGGTTCAACTGCAGCAGTCTGGAGCTGACCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACAGATTCAATAGTTATTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGGACTAATTTCAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCGTATACATCCTCCAACACAGCCTACATGCAAATCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGGCTCGGAATACGGAGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCCTTGGTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 29, 32, 32, 37, 33, 37, 37, 37, 37, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 33, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 37, 39, 39, 39, 37, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 31, 37, 37, 39, 37, 37, 37, 39, 38, 39, 38, 39, 39, 39, 39, 38, 34, 38, 39, 39, 38, 38, 36, 38, 38, 39, 37, 38, 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32, 33, 33, 37, 37, 37, 33, 32, 29, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGADLMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYRFNSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFNEKFKGKATFTAYTSSNTAYMQISSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPHNGGN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRGTTATTYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : 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32, 33, 32, 33, 37, 37, 38, 37, 38, 38, 38, 36, 37, 38, 38, 38, 39, 39, 36, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 34, 38, 36, 39, 36, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 36, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 33, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 37, 36, 37, 38, 38, 37, 38, 37, 38, 39, 39, 39, 26, 39, 39, 38, 38, 13, 37, 37, 35, 37, 38, 38, 38, 37, 38, 38, 39, 38, 38, 38, 37, 37, 38, 38, 38, 38, 37, 38, 37, 38, 38, 37, 37, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 39, 39, 37, 33, 37, 37, 38, 38, 37, 33, 37, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 35, 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: "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKQYGNYDWYFDV" } ] }, { "name" : "V-REGION", "type" : 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"IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 37, 38, 38, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 38, 37, 38, 37, 39, 33, 37, 36, 36, 38, 37, 32, 33, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 37, 37, 38, 38, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYHSALISRLSISKDNSKSQIFLKLNSLQTDDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKANWAPFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTENTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPSQSLPLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTENTATYYCARIYYGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.368 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12935:2250 (reversed)", "sequence" : "CCCCCAGGTCCAGCTCCAGCAGTCTGGAGCTGAACTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAATGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCTTATCCCCTGCTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { 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"QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.369 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11437:2251 (reversed)", "sequence" : "TAGTCAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCATTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 34, 35, 37, 39, 34, 38, 39, 39, 37, 37, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 35, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 37, 39, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 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"EVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.373 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20170:2257 (reversed)", "sequence" : "TTTCGAGGTGCAGCTGGTGGAGTCTGGAGCTGAGCTGGCGAGGCCCGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAGATCAGGTGATGGTTACCCCAGGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGCCCC", "circular" : false, 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"translation", "value" : "EVQLVESGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRTGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 329, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMGHYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062177" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : 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"max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGRSYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YGR" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKVSCKASGYEFTSYNIYWVKQSHGKSLEWIGHIDPYNGGTSYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYCAREGDYYGRGGMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.379 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19644:2268 (reversed)", "sequence" : "TTTCCAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGTCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTTTGCGGTCTATTTCTGTGCAAGACACAAGTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCACTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 36, 38, 36, 32, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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36, 36, 38, 38, 38, 38, 36, 37, 36, 38, 38, 38, 38, 34, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKVKATLTADKSSSTAYMQLSSLTSEDFAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.20%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" 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"DVQLVESGPGLVAPSQSLSITCTVSGFSLTGYSVNWVRQPPGKGLEWLGMIWGDGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARSDGYYEGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.384 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12870:2271 (reversed)", "sequence" : "TTTACAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGGTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGTCCCCCTCTCTACTATGATTACGGATTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCCCAGCCAAAACAACACCCCCATCTGTTCATCCCCTGTTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 368, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYDYDDWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARGDYDYDDWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.388 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16840:2274 (reversed)", "sequence" : "GCCGGAGGTTCAGCTTCAGCAGTCTGGACCTGAGCTGATGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTTCAATGGTGCTCCTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGCTGATTACTACGGTAACAGCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGCCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 35, 35, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 18, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELMKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFNGAPTYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARADYYGNSPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.389 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12417:2274 (reversed)", "sequence" : "CGAGCAGGTTCAGCTTCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCACTGGACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 32, 35, 37, 33, 37, 37, 37, 37, 35, 38, 38, 38, 38, 38, 38, 38, 38, 34, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 37, 39, 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTSGYTFTNYWINWIKQRPGQGLEWLGRIAPGSGSTYYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.391 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11412:2281 (reversed)", "sequence" : "ACCGGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCACCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTATCCAGATATAGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATGATATGGGGTGGTGGAAGCACAGACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGCTCTACTATGGTAACACATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGTCTATCCACTGAACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 29, 35, 33, 33, 33, 37, 37, 38, 38, 38, 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37, 33, 32, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYATATYWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC 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"EVHLVESGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.527 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11040:2444 (reversed)", "sequence" : "GCGGGAGGTGCAGCTGCAGCAGTCTGGACCTGAGTTGGTGAAGCCTGGGACTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCGCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCGGAGGGTCGATATTACTTTGCTATGAACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCCCTGCTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 32, 33, 31, 33, 35, 33, 33, 33, 33, 37, 37, 36, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 37, 34, 37, 38, 38, 33, 17, 37, 39, 37, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 33, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 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"translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMERRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSEGRYYFAMNY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFALDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFALDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMERRSLTSEDSAVYYCARSEGRYYFAMNYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.528 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15208:2444 (reversed)", "sequence" : "GTTCGAAGTGATGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCATTGATAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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35, 38, 37, 36, 37, 38, 38, 38, 34, 38, 38, 38, 37, 39, 38, 38, 37, 38, 39, 38, 39, 38, 38, 38, 32, 32, 38, 37, 37, 36, 37, 38, 36, 18, 38, 38, 33, 38, 39, 37, 36, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 39, 38, 35, 38, 35, 38, 35, 37, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 18, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } 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"EVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGVYYGNPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.302 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11955:2160 (reversed)", "sequence" : "GAGTGAGGTCCAGCTGCAACAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGCTTGGAAATATTTATTCTGGTACTGGTAGTATTTACTACGATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACAGCTGAGGACTCTGCGGTCTATTACTGTACAAGATCGGGGTATGTTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGGACG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 37, 37, 37, 37, 16, 37, 38, 38, 38, 37, 16, 37, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 16, 33, 38, 38, 38, 39, 39, 39, 35, 38, 37, 38, 38, 38, 36, 38, 39, 37, 38, 38, 39, 37, 38, 39, 39, 39, 36, 38, 39, 39, 38, 38, 39, 39, 39, 38, 37, 37, 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38, 37, 38, 37, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 38, 37, 39, 38, 38, 36, 37, 33, 33, 18, 37, 37, 36, 38, 39, 38, 30, 34, 39, 39, 39, 39, 39, 39, 39, 36, 36, 30, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 32, 32, 33, 33, 37, 37, 33, 33, 32, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWLGN" } ] }, { 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ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { 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38, 36, 37, 33, 19, 32, 37, 37, 33, 37, 33, 33, 33, 33, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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(292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, 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"EVQLQQSGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGKGLQWIGEINPDSRTINYAPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARQAYYGHSDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.308 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13431:2164 (reversed)", "sequence" : "GCGGGAGGTTCAGCTGCAGCAGTCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAATTACTACGGTAGTAGTTCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCCTGGTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 35, 33, 33, 37, 37, 35, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 20, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 37, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 17, 38, 38, 39, 37, 39, 39, 39, 39, 39, 36, 38, 37, 38, 38, 38, 37, 38, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 34, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 37, 34, 35, 36, 37, 39, 37, 37, 38, 37, 39, 38, 38, 35, 38, 38, 39, 39, 39, 37, 37, 38, 29, 29, 29, 29, 38, 24, 27, 37, 38, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 37, 38, 39, 38, 38, 38, 38, 36, 38, 39, 36, 39, 38, 36, 37, 35, 15, 37, 35, 34, 37, 37, 37, 33, 37, 37, 37, 37, 39, 37, 35, 38, 38, 37, 38, 38, 36, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 37, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 38, 33, 39, 39, 39, 38, 38, 39, 39, 39, 38, 33, 37, 17, 39, 38, 36, 34, 38, 34, 38, 38, 39, 37, 39, 39, 36, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 33, 38, 37, 32, 37, 16, 34, 37, 37, 39, 39, 38, 18, 39, 36, 37, 18, 38, 36, 18, 38, 36, 36, 14, 39, 37, 39, 37, 38, 35, 35, 18, 37, 34, 39, 38, 38, 34, 39, 39, 39, 39, 38, 37, 36, 38, 37, 37, 33, 18, 37, 38, 33, 37, 37, 38, 37, 37, 39, 39, 39, 38, 38, 38, 38, 34, 36, 38, 38, 39, 38, 38, 38, 37, 38, 37, 33, 37, 33, 34, 33, 33, 33, 33, 31, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSVLVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWAKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHPNSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ANYYGSSSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSVLVRPGASVKLSCKASGYTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTNYNEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCANYYGSSSYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.310 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12900:2165 (reversed)", "sequence" : "AGTTGACGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAATGGTAACTACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCATTGCAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 37, 37, 32, 32, 33, 33, 33, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 38, 36, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 38, 38, 39, 39, 39, 37, 36, 38, 38, 38, 36, 36, 38, 39, 37, 36, 16, 38, 39, 39, 36, 16, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 36, 37, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 32, 18, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDNGNYDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "96.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDNGNYDYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.311 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18857:2165 (reversed)", "sequence" : "TGACCAGGTGCAGCTGAAGGAGTCTGGGCCTCAGCTGGTTAGGCCTGGGGCTTCAGTGAAGATATCCTGCCAGGCTTCTGGTTACTCATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGTCTTGAGTGGATTGGCATGATTGATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAATCTTTATGGTTACCTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCATTGGAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 30, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 37, 19, 37, 38, 38, 38, 35, 19, 34, 19, 37, 37, 39, 18, 37, 38, 39, 39, 38, 39, 37, 37, 37, 33, 37, 39, 37, 34, 38, 38, 38, 38, 38, 39, 36, 33, 37, 36, 38, 35, 32, 37, 39, 37, 20, 37, 20, 35, 37, 18, 33, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGRGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRVEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSRLKSEDTAMYYCARSRMRYGAMDYWGRGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.319 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13948:2172 (reversed)", "sequence" : "TGGCCAGGTTCAGCTGCAGCAGTCTGGAGGTGGCCTGTTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGACTTGGGTCCGGCAAGCTCCAGGGAAAGGACTAGAATGGATTGGAGAAATTAATCCAGATAGCAGGACGAAAAACTATAAGCCATCTCTAAAGGAGAAATTCATCATGTCCAGAGACAACGCCAAAAACACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATGACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGTTTATCCCCTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 32, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 19, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 37, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 32, 38, 39, 39, 37, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 20, 35, 37, 38, 39, 39, 39, 38, 38, 39, 34, 38, 38, 38, 37, 35, 31, 38, 38, 39, 37, 39, 39, 38, 39, 35, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 31, 36, 38, 39, 39, 39, 38, 37, 39, 36, 36, 36, 38, 38, 37, 38, 39, 39, 39, 36, 38, 39, 38, 14, 37, 37, 38, 38, 17, 37, 39, 33, 37, 38, 35, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 37, 33, 38, 37, 35, 37, 39, 16, 24, 30, 38, 14, 27, 31, 36, 36, 37, 38, 39, 37, 38, 39, 37, 39, 39, 15, 27, 15, 27, 35, 38, 35, 35, 39, 37, 39, 39, 39, 39, 13, 33, 37, 38, 35, 34, 37, 39, 39, 35, 38, 35, 34, 39, 38, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 35, 34, 37, 38, 38, 34, 36, 36, 38, 38, 37, 37, 39, 38, 38, 38, 37, 37, 37, 37, 39, 38, 37, 37, 38, 38, 35, 33, 37, 33, 33, 38, 35, 39, 38, 38, 33, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 38, 39, 38, 37, 36, 29, 16, 39, 35, 37, 38, 37, 39, 37, 38, 39, 39, 39, 39, 38, 37, 39, 39, 38, 34, 16, 37, 38, 33, 37, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 38, 37, 17, 39, 39, 38, 38, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 36, 38, 38, 38, 33, 33, 38, 39, 39, 38, 16, 39, 37, 39, 37, 39, 38, 39, 38, 38, 36, 38, 39, 36, 36, 37, 36, 37, 36, 37, 16, 37, 33, 32, 32, 35, 37, 37, 37, 32, 29, 29, 16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGGLLQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "INPDSRTK" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWMTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : "AF174030" }, { "name" : "Source-Mismatches", "value" : "71" }, { "name" : "Source-Identity", "value" : "76.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGGLLQPGGSLKLSCAASGFDFSRYWMTWVRQAPGKGLEWIGEINPDSRTKNYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWMTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.320 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13046:2173 (reversed)", "sequence" : "GGCGGAGGTGAAGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTTGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGGTCTACTATGGTAACCCCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGTGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 33, 32, 32, 33, 32, 35, 33, 33, 33, 37, 37, 33, 37, 38, 38, 38, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 37, 38, 37, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 36, 38, 37, 37, 39, 39, 39, 39, 38, 39, 37, 38, 39, 35, 18, 37, 38, 37, 38, 39, 38, 37, 37, 38, 38, 38, 37, 38, 39, 39, 39, 34, 31, 38, 38, 38, 36, 38, 38, 39, 38, 37, 39, 39, 36, 38, 38, 38, 37, 32, 38, 39, 38, 39, 39, 16, 37, 38, 39, 38, 37, 36, 35, 35, 37, 36, 38, 38, 38, 33, 37, 39, 16, 28, 35, 27, 28, 34, 37, 34, 39, 39, 39, 35, 33, 37, 35, 37, 39, 39, 27, 36, 37, 37, 39, 39, 32, 37, 37, 38, 26, 34, 38, 37, 37, 37, 38, 34, 38, 15, 34, 38, 34, 37, 38, 38, 38, 37, 34, 34, 37, 35, 37, 38, 19, 37, 34, 36, 37, 38, 36, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 38, 38, 34, 24, 37, 33, 37, 37, 37, 37, 38, 39, 39, 38, 32, 37, 33, 37, 37, 38, 37, 38, 33, 35, 35, 39, 39, 39, 39, 37, 37, 38, 34, 37, 37, 39, 37, 39, 36, 39, 38, 33, 37, 37, 33, 38, 39, 39, 39, 39, 37, 38, 30, 16, 15, 37, 38, 38, 37, 37, 16, 39, 39, 38, 38, 39, 38, 37, 38, 37, 37, 38, 39, 37, 39, 36, 38, 38, 34, 34, 34, 16, 39, 38, 35, 38, 37, 38, 16, 29, 16, 33, 38, 38, 36, 30, 38, 38, 38, 39, 37, 38, 38, 37, 38, 35, 35, 14, 37, 29, 15, 36, 38, 37, 37, 14, 14, 32, 38, 34, 36, 34, 38, 37, 36, 39, 39, 39, 37, 37, 39, 38, 39, 36, 36, 37, 34, 38, 39, 37, 38, 38, 38, 36, 36, 33, 36, 33, 15, 38, 39, 39, 36, 32, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 38, 39, 38, 37, 38, 37, 38, 38, 32, 16, 37, 36, 37, 32, 32, 32, 37, 32, 37, 32, 16, 32, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVYYGNPYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSWFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGVYYGNPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.441 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14171:2325 (reversed)", "sequence" : "CTCCGAGGTAAAGCTTCAGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGATGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGACCTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGACCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGATCGGAATACTTCGGTAGTAGCTACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCTTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 35, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 37, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 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"sequence" : { "name" : "ERR346596.444 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16936:2326 (reversed)", "sequence" : "ATGACAGGTCCAACTGCAGCAGCCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGATACGATGGTTACTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 38, 38, 39, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 37, 38, 38, 38, 39, 39, 37, 39, 39, 38, 37, 38, 37, 37, 33, 38, 39, 39, 39, 37, 39, 38, 38, 39, 39, 38, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 26, 37, 38, 39, 39, 39, 38, 39, 38, 37, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 36, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 34, 37, 39, 37, 26, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 33, 39, 39, 38, 36, 39, 37, 38, 38, 30, 35, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 35, 39, 39, 37, 33, 38, 36, 16, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 37, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 37, 39, 37, 37, 18, 39, 38, 18, 36, 39, 38, 36, 36, 36, 36, 36, 32, 38, 38, 37, 38, 37, 39, 34, 37, 39, 39, 39, 37, 38, 39, 39, 38, 38, 38, 38, 39, 37, 37, 38, 32, 38, 37, 38, 38, 34, 37, 37, 33, 33, 37, 37, 37, 32, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDGYYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.445 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16258:2329 (reversed)", "sequence" : "GGTTCAGGTTCAACTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTTCCTATTACTACGGTAGTAGCTCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTTTATCCCCTGCTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 37, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 35, 37, 38, 39, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 37, 39, 39, 38, 39, 38, 39, 39, 33, 37, 39, 39, 39, 37, 38, 39, 39, 39, 37, 39, 39, 38, 39, 39, 38, 38, 38, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 14, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 37, 38, 39, 38, 37, 36, 38, 38, 39, 37, 38, 38, 37, 38, 38, 37, 37, 37, 38, 33, 32, 33, 33, 33, 37, 33, 33, 33, 33, 32, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.446 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11295:2333 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGTAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCATTGACAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 37, 38, 37, 38, 37, 39, 39, 37, 38, 39, 19, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 36, 36, 38, 38, 38, 38, 39, 37, 18, 37, 38, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 36, 36, 33, 37, 39, 39, 31, 31, 38, 38, 39, 36, 38, 39, 18, 38, 37, 39, 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39, 36, 15, 39, 39, 38, 37, 39, 38, 39, 38, 38, 36, 38, 36, 37, 37, 37, 33, 38, 38, 37, 16, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDGSVVYFCARAITDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.450 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19396:2336 (reversed)", "sequence" : "ACCAAACCATGAAACCAACATAAATATTATTGCCCGGCGTACGGGGAAGGATGCCAATAGTCACACAGTCCTTGATGGTATAATAACCTTCATCATGGCGACCATCCAAAGGATAAACATCATAGGTAGTCGAGAAGTTAGTCGGAATCGAAGAATTCTCAAAGCGAACCAAACAGGCAAAAAATTTAGGGTCGGCATCAAAAGCAATATCAGCACAAACAGAAACAACCTAATTAGCGGCGTTGACAGATGTATCCATCTGAATGCAATGAAAAAAACCACCATTACCAGCATTAACCGTCAAACTATCAAAATATAACGTTGACGATGTAGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 31, 32, 16, 16, 16, 31, 16, 33, 16, 16, 16, 33, 16, 32, 16, 32, 15, 16, 16, 16, 18, 18, 35, 18, 18, 18, 35, 37, 18, 32, 38, 15, 36, 15, 32, 32, 36, 32, 36, 14, 14, 14, 14, 14, 32, 36, 15, 16, 16, 15, 32, 16, 16, 31, 37, 16, 31, 17, 17, 16, 16, 33, 29, 15, 31, 33, 34, 17, 17, 37, 16, 16, 17, 16, 33, 17, 37, 17, 17, 17, 31, 37, 39, 39, 14, 14, 33, 35, 15, 37, 39, 37, 16, 14, 33, 12, 12, 29, 14, 29, 35, 16, 15, 33, 16, 16, 33, 38, 15, 37, 16, 37, 36, 16, 27, 16, 16, 37, 15, 17, 17, 16, 14, 17, 33, 33, 33, 15, 2, 34, 15, 2, 34, 2, 30, 16, 15, 16, 27, 15, 34, 36, 34, 2, 18, 29, 37, 16, 26, 15, 29, 2, 2, 16, 27, 23, 34, 36, 38, 34, 34, 38, 38, 37, 2, 37, 39, 39, 39, 37, 16, 16, 16, 19, 34, 38, 33, 37, 23, 30, 16, 27, 34, 30, 15, 38, 32, 25, 37, 31, 17, 9, 37, 24, 34, 34, 33, 37, 37, 16, 35, 37, 17, 33, 16, 14, 38, 38, 33, 31, 15, 15, 14, 17, 29, 17, 37, 37, 27, 27, 14, 29, 16, 16, 39, 38, 37, 15, 37, 36, 14, 14, 36, 14, 29, 14, 29, 14, 17, 33, 17, 15, 16, 16, 33, 17, 33, 37, 17, 38, 34, 39, 36, 39, 38, 33, 37, 17, 33, 17, 16, 16, 38, 37, 17, 38, 39, 36, 32, 14, 37, 33, 14, 38, 38, 38, 37, 37, 39, 38, 39, 38, 33, 36, 39, 39, 39, 33, 38, 37, 15, 32, 33, 36, 15, 38, 16, 39, 39, 38, 38, 33, 18, 37, 15, 39, 38, 35, 35, 35, 18, 32, 16, 16, 32, 30, 37, 36, 16, 38, 32, 16, 18, 35, 16, 34, 33, 16, 32, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 206, "max" : 319, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "LYFDSLTVNAGNGGFFHCIQMDTSVNAAN*VVSVCADI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 1, "max" : 17, "direction" : "Left", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 18, "max" : 205, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.454 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15732:2343 (reversed)", "sequence" : "CCAACAGGTCCAACTGCAGCAGCCTGGACCTGAGCTGGTAACGCCTGGGGCTTCAGTGCCGATGTCCTGCAAGGCTTCTGGGTACACATTCACTAGCTATGTTCTTCACTGGGTGCAGCAGACGCCTGGGCAGGGCCTTGAGTGGATTGGACATATCAATCCTTACCATGATGCCCCTACGTTCAATGAGAGGTTCAACGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACAGGGTGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTAATACTGCGCAAGAGAGGGGGTTGACTACTTTGACTACTGGGGCCAAGGAACCACTCTCACAGTCCCCGCAGCCAAAACAACAGCCCCATCAGCCCATCCAGTGGGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 32, 32, 37, 32, 37, 37, 37, 37, 38, 38, 38, 16, 38, 16, 16, 34, 16, 38, 15, 37, 33, 38, 38, 39, 39, 39, 38, 39, 15, 36, 39, 37, 37, 38, 39, 39, 17, 16, 33, 37, 38, 39, 32, 32, 36, 14, 32, 36, 38, 37, 32, 37, 39, 37, 16, 16, 32, 36, 36, 36, 38, 38, 37, 38, 38, 38, 15, 31, 38, 36, 39, 37, 39, 39, 39, 38, 37, 39, 39, 33, 39, 33, 37, 38, 37, 38, 33, 17, 33, 38, 33, 37, 37, 39, 17, 37, 38, 38, 39, 17, 33, 38, 38, 17, 33, 33, 33, 38, 36, 39, 38, 14, 33, 16, 38, 15, 33, 37, 15, 27, 29, 14, 37, 38, 39, 38, 36, 15, 27, 34, 38, 37, 38, 37, 39, 38, 35, 34, 36, 37, 38, 16, 32, 38, 35, 35, 39, 39, 16, 28, 16, 28, 30, 16, 27, 30, 16, 28, 37, 36, 37, 38, 13, 16, 29, 29, 27, 27, 27, 31, 29, 25, 37, 29, 13, 13, 27, 34, 38, 38, 25, 27, 27, 35, 15, 15, 34, 27, 32, 38, 39, 22, 15, 34, 11, 37, 37, 34, 37, 25, 30, 36, 38, 38, 37, 34, 37, 33, 19, 37, 15, 26, 18, 34, 9, 38, 33, 34, 24, 21, 26, 2, 14, 26, 24, 34, 37, 37, 3, 24, 34, 34, 32, 8, 24, 31, 31, 33, 34, 26, 37, 13, 27, 26, 33, 37, 15, 16, 16, 29, 27, 15, 15, 34, 15, 29, 16, 15, 30, 14, 16, 16, 27, 16, 38, 38, 37, 16, 38, 37, 14, 14, 27, 14, 34, 37, 33, 16, 17, 33, 17, 17, 16, 36, 27, 27, 31, 36, 33, 16, 33, 39, 37, 15, 14, 36, 29, 14, 36, 15, 37, 33, 33, 39, 37, 31, 37, 38, 38, 37, 17, 17, 33, 33, 16, 16, 37, 14, 14, 31, 32, 37, 33, 39, 38, 38, 37, 16, 31, 14, 33, 36, 31, 16, 33, 16, 37, 36, 36, 39, 36, 39, 36, 32, 14, 14, 14, 14, 14, 37, 37, 32, 15, 15, 39, 37, 38, 37, 38, 39, 38, 32, 36, 36, 36, 34, 38, 37, 33, 16, 37, 34, 34, 38, 32, 38, 35, 16, 16, 34, 33, 16, 32, 32, 32, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVTPGASVPMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LHWVQQTPGQGLEWIGH" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVPA" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] } ] }, { "sequence" : { "name" : "ERR346596.455 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14027:2343 (reversed)", "sequence" : "TTCACAGGTCCAGCTGCAGCAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTGCACCCTTACTAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGGAGGGCAGGGTCTCTAAGGCACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 33, 37, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 37, 37, 34, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 36, 38, 37, 38, 38, 39, 38, 38, 17, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 35, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 24, 39, 38, 24, 37, 38, 25, 37, 38, 23, 39, 33, 28, 36, 38, 24, 39, 39, 37, 39, 39, 38, 39, 37, 21, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 36, 39, 39, 39, 38, 37, 37, 37, 34, 37, 28, 37, 38, 38, 33, 26, 37, 34, 37, 39, 39, 39, 39, 38, 38, 38, 38, 37, 36, 36, 37, 37, 37, 38, 38, 38, 39, 39, 38, 37, 16, 37, 39, 39, 37, 39, 38, 39, 37, 39, 39, 37, 39, 39, 37, 38, 37, 37, 39, 39, 38, 39, 38, 31, 31, 30, 34, 38, 39, 37, 37, 39, 39, 38, 37, 37, 38, 37, 18, 37, 38, 38, 39, 39, 37, 36, 34, 36, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 37, 36, 37, 37, 37, 37, 33, 33, 35, 35, 20, 37, 33, 32, 18, 33, 16, 33, 18, 37, 37, 33, 39, 39, 37, 38, 20, 38, 37, 38, 37, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 36, 37, 38, 38, 38, 37, 37, 32, 17, 33, 33, 33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GCTLTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRAGSLRHFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKASGCTLTSYWMQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARRAGSLRHFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.456 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12879:2343 (reversed)", "sequence" : "ATCCGAAGTGAAGCTTGAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTTATGGTGGTAGTTACATCTATTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACGATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGATCGTGGGGTACAGGGCTATGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCATTGTACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 29, 32, 35, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 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"ERR346596.463 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13192:2363 (reversed)", "sequence" : "TCCGCAGGTGCAGCTGAAGGAGTCTGGAGCTGAACTGGTAAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTATGATATAAACTGGGTGAGGCAGAGGCCTGAACAGGGACTTGAGTGGATTGGATGGATTTTTCCTGGAGATAATAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTACAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGGCTGACATCTGAAGACTCTGCTGTCTATTTCTGTGCACATGATGGTTTACTACCGGGGATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCCTGGTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 34, 38, 39, 37, 39, 37, 39, 37, 39, 38, 39, 37, 35, 35, 38, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 20, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 36, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 38, 37, 36, 39, 39, 39, 39, 37, 37, 37, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYMQLSSRTSEDSAVDFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, 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38, 39, 33, 37, 38, 38, 39, 39, 39, 38, 39, 38, 37, 36, 37, 38, 38, 39, 38, 38, 38, 37, 38, 38, 37, 36, 38, 37, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDIAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGVQGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", 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"GCGCGAGGTCCAACTGCAACAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATAACACAGCCATGGACTACTGTGCCAGATTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTCATCCACTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 37, 39, 39, 38, 39, 39, 34, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 33, 37, 39, 39, 39, 37, 38, 39, 39, 35, 38, 38, 37, 39, 35, 37, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 33, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 36, 38, 38, 38, 38, 37, 39, 39, 39, 33, 38, 39, 39, 38, 39, 31, 38, 38, 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"sequence" : { "name" : "ERR346596.472 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11595:2369 (reversed)", "sequence" : "CCTAGAGGTGATGCTGGTGGAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCGAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCTTATCCATTGAATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 37, 32, 38, 39, 39, 38, 39, 39, 32, 37, 38, 38, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 35, 38, 39, 36, 39, 37, 37, 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39, 39, 39, 38, 32, 36, 34, 39, 39, 39, 39, 38, 33, 37, 33, 17, 37, 20, 39, 38, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 19, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGDDLVKPGASVKLSCEAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IPPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" 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"EVMLVESGDDLVKPGASVKLSCEASGYTFTSYWINWIKQRPGQGLEWIGRIPPGSGTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARGSYYYGSSSPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.473 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12282:2369 (reversed)", "sequence" : "TACACAGGTCCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGCTTGGAAGGATTGATCCTGCGAATGGTAATACTTACTATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCGATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACCACTGGGGCCAAGGCACCACTCTCACAGGCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCCTGAGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 19, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 36, 38, 38, 32, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 17, 38, 39, 35, 38, 34, 32, 37, 38, 38, 36, 39, 33, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 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38, 33, 37, 38, 37, 33, 16, 37, 33, 14, 36, 38, 37, 37, 37, 34, 37, 37, 15, 33, 14, 39, 36, 37, 33, 33, 16, 32, 32, 16, 33, 34, 15, 32, 14, 32, 33, 14, 33, 15, 34, 34, 34, 30, 39, 38, 38, 37, 37, 36, 33, 38, 34, 36, 38, 38, 39, 38, 37, 33, 16, 37, 16, 33, 16, 37, 33, 32, 30, 35, 37, 37, 37, 37, 32, 32, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYAPKFQGKATITADTSSNTAYLQLSSLTSEDTAVDYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTGSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWLGRIDPANGNTYYAPKFQGKATITADTSSNTAYLQLSSLTSEDTAVDYCARYYYGSSYFDHWGQGTTLTGSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.333 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13026:2195 (reversed)", "sequence" : "CGATGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTAACGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCGGACAGCTGAGGACTCTGCAGTCGATTATGGTGGAAGATCGGGGAGGTACGACGTGGGGTTTGCTGACTGGGGCCAAGGGACTCTGGTCACGGTCTCGGCAGCCAAAACAACACCCCCATCGGCCCATCCACTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 16, 16, 33, 36, 34, 38, 39, 38, 39, 33, 32, 33, 37, 33, 37, 15, 15, 37, 37, 38, 38, 39, 39, 35, 16, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 36, 37, 39, 38, 39, 17, 32, 16, 35, 16, 35, 37, 38, 39, 38, 38, 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"value" : "MNWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "FYNQKLTGKATLTVDKSSSTAHMELLSRTAEDSAVDYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GRSGRYDVGFAD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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38, 37, 34, 38, 38, 38, 38, 33, 33, 33, 37, 37, 32, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGALVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADRSSSTAYMQLSSLTSENSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGALVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADRSSSTAYMQLSSLTSENSAVYFCARSDDGFPYSFDSWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.335 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSHT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKLKDKTTLTADKSSSTAYMKLISLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", 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"IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TEAPDIMDAWGQGASVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TE" }, { "name" : "IMGT_allele", "value" : "IGHD1-6*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-6" }, { "name" : "Source-Sequence", "value" : "FJ041115" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKMSCKASGYTFTSHTMLWVKQRPGQGLEWIGYINPSSGYTDYNQKLKDKTTLTADKSSSTAYMKLISLTSEDSAVYYCARKEDNLGYGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.336 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18178:2196 (reversed)", "sequence" : "AATCCAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGGGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGAGATGGTAACTACGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCCCATCCCTTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 35, 37, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 31, 38, 38, 39, 39, 18, 37, 38, 39, 37, 33, 33, 38, 38, 39, 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17, 39, 39, 39, 38, 39, 39, 39, 38, 38, 35, 37, 39, 36, 36, 36, 30, 36, 37, 38, 38, 36, 32, 37, 31, 33, 33, 35, 35, 33, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGNYAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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} ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGNYAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.338 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15289:2200 (reversed)", "sequence" : "ATTACAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGGCCTCTGGCTACAACTTCACCAGCTACTGGATAAACTGGGTGAAACTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTGGTAATCACAAAAACGAGAAATTCAAGACCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGGCATCTGAGGACTCTGCTCTCTATTACTGTGCAAGAGATGGGAACTGGCCCTTTGCTTGCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTCCATCCCTTGTACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 36, 38, 38, 38, 39, 38, 38, 36, 36, 37, 38, 37, 38, 38, 37, 37, 32, 33, 33, 37, 37, 37, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYNFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HKNEKFKTKATLTVDTSSSTAYMQLSSLASEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGGN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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(269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAYMQLDSLTSEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"sequence" : { "name" : "ERR346596.355 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17427:2228 (reversed)", "sequence" : "CCCGCAGGTCCAGCTGCAGCAGTCTGAGTCCACACACCACTCCTGGTCCCAGAAGTCACGGCAAGCACTGAGAATTCTCCCTCAGAAAATGTGACAGGGGGAAGAGAAGGACACTTTCCTTTGTGTTGCTCCCCCCTGACTGGTTAGATGAGGTGTCCTCCTCACAATGTGGTCCCCCTTGCCCTCTATGGGGTACTCACTTGGCCTGTAGAAAGAGCTCCTTGTTGAAAGGCTTGTGTCCCCACTTGTTTCTCTTCCCCCATCGGTTCATCCATTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 33, 20, 37, 39, 18, 35, 39, 36, 36, 30, 33, 32, 17, 32, 33, 34, 37, 35, 18, 18, 35, 37, 36, 37, 31, 37, 16, 18, 32, 33, 20, 32, 37, 32, 36, 38, 15, 32, 37, 39, 39, 17, 38, 33, 38, 37, 37, 38, 35, 37, 33, 19, 35, 36, 33, 33, 37, 37, 31, 37, 38, 39, 37, 37, 37, 37, 37, 37, 38, 35, 18, 37, 37, 36, 22, 30, 35, 22, 37, 37, 38, 39, 33, 33, 25, 30, 33, 15, 37, 38, 37, 38, 39, 39, 39, 37, 38, 37, 26, 30, 37, 39, 35, 37, 38, 39, 37, 35, 34, 34, 31, 21, 27, 38, 35, 37, 37, 39, 39, 39, 37, 38, 38, 39, 39, 39, 36, 38, 36, 39, 36, 30, 27, 35, 37, 34, 35, 35, 37, 37, 38, 32, 37, 38, 39, 39, 37, 39, 36, 30, 38, 34, 37, 36, 36, 14, 26, 33, 34, 39, 37, 37, 34, 39, 38, 38, 38, 38, 39, 37, 37, 38, 37, 16, 34, 37, 36, 37, 37, 33, 33, 35, 39, 38, 37, 37, 31, 33, 37, 16, 25, 33, 37, 37, 37, 37, 33, 39, 37, 37, 38, 37, 37, 18, 37, 16, 38, 34, 38, 37, 37, 37, 37, 38, 38, 37, 38, 37, 35, 37, 37, 18, 18, 18, 17, 37, 17, 32, 17, 17, 37, 38, 39, 38, 38, 36, 36, 37, 19, 37, 35, 38, 33, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 255, "max" : 281, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 109, "max" : 123, "direction" : "Left", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "1" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 124, "max" : 254, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 27, "max" : 59, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "VTSGTRSGVWT" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 1, "max" : 22, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "QLQLQESGPGLVKPSETLSLTCTVSGDSISSSRYYWAWIRQ 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32, 32, 35, 35, 16, 16, 37, 32, 32, 30, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGPDLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLVV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWMTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"QVQLQQSGGGLVQPGGSLKLSCAASGFDFSGYWMTWVRQAPGKGLEWIGEINPDSRTINYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWMTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.360 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11492:2232 (reversed)", "sequence" : "TCAGGAGGTGCAGCTGGTGGAGTCCGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAGTGATACTAGCTACAAGCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCTACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAATGAGGGGCGTCTATGATGGTTACTACGTACTGATATCTCACTATGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTTTATCCACTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 18, 32, 32, 33, 34, 32, 33, 33, 33, 37, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 34, 36, 38, 38, 36, 36, 37, 38, 38, 39, 39, 39, 39, 39, 34, 37, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 35, 38, 39, 39, 36, 38, 39, 39, 39, 39, 39, 37, 38, 37, 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29, 29, 17, 29, 15, 16, 15, 37, 38, 38, 38, 37, 37, 16, 37, 36, 39, 38, 37, 31, 37, 37, 38, 31, 33, 33, 16, 33, 31, 39, 37, 33, 37, 38, 31, 37, 39, 36, 36, 36, 37, 36, 33, 15, 38, 37, 16, 39, 39, 37, 38, 37, 36, 33, 38, 35, 34, 37, 39, 38, 38, 34, 36, 37, 36, 33, 37, 33, 15, 38, 39, 39, 36, 34, 38, 38, 38, 37, 36, 33, 38, 36, 38, 38, 38, 39, 37, 38, 38, 37, 38, 38, 33, 16, 16, 37, 37, 35, 37, 37, 37, 37, 37, 32, 32, 32, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYKQKFKGKAKLTAVTSTSTAYMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNSDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 353, "max" : 385, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TMRGVYDGYYVLISHYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.17%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 334, "max" : 385, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYTYPYFALDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YYTY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "M13330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 385, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGTVLARPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGAIYPGNSDTSYKQKFKGKAKLTAVTSTSTAYMELSSLTNEDSAVYYCTMRGVYDGYYVLISHYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.483 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14570:2374 (reversed)", "sequence" : "GCTCGAGGTCCAGCTGCAACAGTCTGGACCTGAGGTGGTAAAGCCTGGGGCTTCAGTGATGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGCCTACTACATTCACTGGGTGAAGCAAAGTCATGTAAAGAGCCCTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTAGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAAAGTCCTCCAGCAGAGCCTACATGGAGGTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGATCACCCCCTGGGGTTTTCTTATTGGGGCCAAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCGGTTCATCCATTGCATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 30, 32, 32, 16, 32, 35, 32, 37, 37, 37, 38, 38, 38, 33, 38, 16, 16, 33, 33, 37, 32, 37, 35, 18, 15, 33, 33, 38, 38, 36, 15, 15, 15, 37, 15, 36, 36, 38, 17, 35, 32, 37, 39, 16, 15, 14, 32, 36, 36, 14, 32, 37, 16, 16, 17, 32, 16, 17, 35, 37, 17, 17, 32, 38, 33, 38, 16, 38, 34, 37, 35, 34, 14, 34, 37, 38, 37, 16, 33, 16, 33, 16, 33, 37, 31, 37, 38, 37, 17, 37, 39, 16, 37, 16, 37, 38, 16, 37, 38, 38, 16, 16, 37, 37, 31, 38, 37, 37, 39, 38, 36, 39, 36, 32, 38, 37, 16, 33, 15, 16, 15, 33, 33, 29, 33, 36, 37, 38, 37, 39, 33, 37, 38, 39, 39, 14, 38, 38, 39, 39, 38, 39, 38, 35, 39, 39, 39, 39, 39, 39, 34, 27, 38, 39, 38, 31, 37, 35, 17, 35, 38, 37, 35, 33, 35, 33, 37, 37, 38, 16, 33, 30, 33, 33, 37, 38, 37, 16, 37, 35, 37, 38, 37, 38, 16, 37, 29, 38, 39, 37, 39, 38, 39, 38, 37, 37, 35, 16, 26, 34, 39, 38, 38, 32, 37, 34, 34, 38, 38, 39, 39, 37, 37, 38, 38, 38, 37, 25, 34, 39, 38, 37, 38, 37, 33, 34, 37, 38, 38, 39, 39, 39, 37, 34, 24, 26, 37, 37, 37, 38, 38, 37, 37, 33, 26, 39, 37, 38, 37, 38, 39, 39, 39, 39, 38, 27, 34, 15, 27, 27, 28, 28, 27, 15, 38, 35, 33, 35, 27, 15, 39, 39, 35, 37, 39, 38, 27, 16, 16, 38, 37, 35, 33, 38, 37, 37, 27, 16, 29, 16, 33, 38, 30, 27, 30, 16, 16, 15, 37, 30, 34, 34, 34, 34, 30, 37, 16, 29, 17, 29, 37, 33, 33, 17, 17, 37, 30, 33, 27, 36, 34, 30, 14, 14, 14, 14, 30, 30, 29, 38, 38, 33, 33, 39, 38, 38, 29, 14, 36, 14, 38, 33, 38, 31, 33, 16, 36, 16, 16, 36, 37, 32, 15, 33, 16, 16, 16, 38, 31, 33, 15, 33, 14, 14, 32, 14, 36, 15, 14, 34, 37, 16, 14, 38, 37, 32, 36, 32, 32, 16, 36, 32, 38, 34, 38, 39, 38, 38, 36, 32, 36, 38, 37, 16, 33, 37, 37, 16, 37, 35, 31, 33, 37, 32, 29, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPEVVKPGASVMISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHVKSPEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTAYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIRTRAYYDHPLGFSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPEVVKPGASVMISCKASGYSFTAYYIHWVKQSHVKSPEWIGRINPYNGDTSYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYCAIRTRAYYDHPLGFSYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.484 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20326:2378 (reversed)", "sequence" : "CGTCGAGGTGCAGCTGGTGGAGTCTGGACCTGAGCTAGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGTTACTACATGCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAGTTGTTACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTTACTGTAGACACATCCTCCAGCACAGCCTACATGCAGTTCAACAGCCTGACATCTGAAGACTCTGCGGTCTATTACTGTGCAAGATCTTGCGGGGCTTATGGTTACGACGGGGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGCTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 30, 37, 37, 38, 38, 38, 38, 38, 38, 38, 36, 37, 38, 39, 39, 35, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 33, 38, 38, 39, 39, 39, 38, 35, 38, 39, 38, 38, 39, 39, 39, 38, 39, 39, 36, 38, 20, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 17, 37, 38, 39, 39, 39, 38, 39, 39, 39, 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" 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"GAGGGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAACCTCCGGATTCAGTTTCAGTGACTATTACATGTATTGGATTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTTCAAATGAGCCGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGCAAGACTGGGAGATTATTCTTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCCTTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 38, 38, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 36, 38, 37, 34, 39, 36, 38, 39, 39, 34, 38, 33, 37, 38, 39, 38, 37, 39, 39, 38, 39, 39, 38, 39, 37, 39, 39, 38, 38, 38, 37, 38, 30, 33, 38, 38, 39, 38, 39, 39, 33, 38, 35, 37, 35, 38, 39, 39, 33, 35, 38, 38, 38, 38, 38, 37, 37, 33, 37, 38, 36, 37, 39, 39, 38, 39, 24, 34, 25, 25, 38, 39, 36, 39, 39, 34, 38, 39, 39, 38, 37, 38, 38, 38, 38, 32, 34, 28, 15, 36, 38, 38, 38, 38, 38, 38, 38, 37, 38, 35, 35, 27, 35, 36, 37, 37, 38, 37, 37, 37, 37, 37, 38, 33, 39, 37, 37, 37, 37, 37, 33, 37, 37, 37, 21, 37, 37, 37, 39, 39, 39, 39, 37, 39, 39, 38, 38, 34, 38, 34, 37, 37, 35, 17, 37, 39, 39, 38, 35, 37, 16, 37, 38, 39, 38, 37, 39, 37, 38, 39, 38, 38, 38, 39, 36, 39, 39, 39, 39, 37, 38, 37, 18, 18, 18, 33, 37, 36, 38, 39, 38, 31, 16, 39, 39, 39, 35, 38, 38, 18, 35, 37, 36, 37, 38, 19, 37, 36, 33, 19, 33, 39, 38, 36, 37, 33, 38, 36, 30, 38, 39, 39, 39, 38, 33, 36, 38, 33, 37, 37, 37, 37, 38, 32, 36, 20, 37, 35, 39, 37, 39, 37, 36, 34, 36, 33, 38, 38, 32, 38, 39, 39, 38, 37, 39, 39, 39, 37, 39, 38, 38, 36, 36, 38, 38, 39, 38, 37, 37, 19, 38, 38, 38, 34, 33, 38, 37, 33, 33, 33, 33, 37, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLKLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWIRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLGDYSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LG" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD5-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-1" }, { "name" : "Source-Sequence", "value" : "EU106346" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLKLSCATSGFSFSDYYMYWIRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTATYYCARLGDYSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.495 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19665:2401 (reversed)", "sequence" : "GAGCGAGGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGAGTCCCTGAAATTCTCCTGTGCAGCCTCTGGAATCACTGTCAGTAGTTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTACTGGTGGTGGTACCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAGTGAGCAGTCTGAGGTCTGAGGACACGGCCATATATTACTGTGCAAGACACTACGGCTACGTTGATGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCCTTGAAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 33, 33, 37, 38, 38, 36, 37, 30, 38, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 36, 38, 38, 36, 39, 38, 38, 39, 39, 38, 37, 37, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 38, 37, 38, 38, 39, 38, 36, 38, 34, 38, 38, 38, 39, 39, 39, 39, 23, 37, 37, 38, 39, 39, 39, 38, 37, 38, 38, 35, 37, 35, 35, 37, 37, 37, 39, 39, 38, 39, 39, 39, 37, 39, 38, 38, 26, 36, 37, 34, 38, 38, 27, 34, 37, 34, 38, 37, 38, 38, 27, 32, 38, 35, 38, 38, 37, 39, 38, 37, 37, 37, 37, 37, 38, 39, 38, 39, 38, 38, 38, 38, 37, 37, 37, 38, 39, 37, 33, 36, 37, 38, 32, 37, 27, 39, 37, 38, 38, 38, 37, 38, 31, 37, 33, 37, 38, 37, 37, 37, 37, 38, 33, 37, 30, 30, 17, 17, 17, 34, 38, 36, 38, 37, 17, 35, 35, 37, 37, 37, 39, 37, 38, 36, 30, 14, 36, 39, 39, 37, 39, 38, 37, 35, 38, 35, 37, 37, 39, 39, 39, 36, 39, 39, 38, 37, 18, 37, 38, 38, 37, 38, 39, 38, 39, 39, 37, 38, 38, 35, 37, 39, 37, 37, 39, 38, 35, 37, 20, 37, 37, 39, 37, 39, 38, 36, 32, 36, 37, 38, 33, 33, 39, 38, 37, 38, 37, 39, 38, 38, 39, 37, 38, 36, 18, 36, 38, 16, 38, 36, 37, 32, 37, 18, 37, 32, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 37, 37, 37, 33, 33, 37, 37, 37, 37, 32, 29, 18, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGESLKFSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GITVSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGYVDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.23%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGESLKFSCAASGITVSSYTMSWVRQTPEKRLEWVASITGGGTTYYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYCARHYGYVDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.496 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12916:2401 (reversed)", "sequence" : "TTTGCAGGTTCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAGGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACTTAACTGGGACGAGGGGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGTAGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 16, 38, 38, 38, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 37, 16, 38, 38, 37, 39, 39, 39, 39, 37, 39, 39, 39, 33, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 37, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 37, 36, 36, 36, 38, 38, 38, 39, 39, 39, 38, 37, 38, 35, 37, 39, 38, 39, 39, 38, 32, 38, 39, 39, 38, 32, 36, 36, 36, 37, 38, 37, 39, 39, 33, 38, 39, 34, 38, 37, 37, 39, 38, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELAILTSEDSAIYYCARYGYGSSYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.435 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19591:2320 (reversed)", "sequence" : "TCGTGAAGTGATGCTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTTCATCCCCTGTCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 33, 34, 37, 32, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 36, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 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38, 38, 38, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 34, 33, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQKPEQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDHD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQHNSLTSEEYAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", 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"TATAGAGTTGAAGCTGATGGAGTCTGGAACTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGTTACTGGATAGTTTGGGTGAAGCAGAGGCCTGGACGTGGCCTTGAGTGGATTGGCGAGATTTTACCTAGAAGTGGTAGTATTAATTACAATGAGAACTTCAAGGGCAAGGCCACATTCACTGTAGATACATCCTCCAACACAGCCTACATGCAACTCGGCAGCCTGACATCTGAGGACTCTGCCGTCTACTACTGTGCAAGATGGAGGGGATACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCCTATCCCTTGCATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 33, 35, 18, 33, 16, 35, 35, 16, 37, 34, 34, 37, 38, 37, 37, 16, 33, 33, 32, 37, 35, 15, 35, 37, 36, 38, 37, 33, 37, 38, 39, 39, 16, 33, 33, 36, 38, 36, 38, 15, 37, 37, 36, 38, 34, 36, 38, 38, 36, 16, 37, 32, 36, 37, 17, 38, 36, 33, 36, 38, 33, 35, 38, 38, 37, 37, 37, 37, 37, 36, 38, 38, 38, 39, 39, 37, 37, 36, 37, 15, 33, 15, 38, 39, 38, 37, 33, 38, 39, 36, 37, 37, 33, 17, 31, 31, 37, 39, 33, 37, 38, 39, 17, 17, 31, 16, 37, 38, 30, 29, 29, 36, 38, 33, 38, 38, 39, 39, 38, 29, 14, 38, 32, 38, 15, 15, 14, 30, 36, 37, 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"GAATGAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTAGTAGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGAGAGATGGTTACGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCTATCCCCTGTTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 16, 29, 16, 37, 37, 37, 37, 32, 33, 37, 35, 16, 33, 32, 16, 16, 33, 16, 37, 38, 39, 39, 39, 39, 39, 39, 38, 30, 15, 32, 30, 36, 32, 37, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 33, 39, 14, 32, 37, 39, 39, 34, 38, 39, 39, 39, 36, 39, 39, 37, 39, 39, 39, 39, 39, 31, 16, 35, 17, 38, 39, 14, 37, 38, 39, 39, 39, 39, 39, 33, 39, 39, 39, 37, 38, 39, 39, 39, 36, 37, 38, 39, 39, 39, 39, 39, 39, 33, 36, 38, 39, 39, 29, 37, 17, 37, 38, 39, 39, 36, 38, 38, 30, 14, 36, 36, 36, 39, 37, 39, 39, 39, 16, 37, 16, 34, 38, 39, 37, 33, 38, 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32, 29, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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37, 38, 38, 38, 38, 37, 34, 37, 32, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKNKATLTIDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", 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IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 329, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"QVQLKESGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGSNHKNEKFKTKATLTVDTSSSTAYMQLSSLASEDSALYYCARDGNWPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.586 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14080:2517 (reversed)", "sequence" : "CATAGAGGTGCAGGTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGCGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAAAAACTACTGCAGCTACTGGTACTTCGATGACTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 30, 32, 32, 32, 31, 37, 37, 37, 32, 37, 37, 38, 16, 33, 38, 32, 32, 16, 36, 32, 15, 38, 39, 39, 39, 39, 16, 38, 32, 36, 38, 38, 32, 32, 37, 36, 36, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 39, 39, 33, 38, 37, 39, 36, 33, 33, 38, 37, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MRWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYCSYWYFDD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 329, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "SWYYFDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SW" }, { "name" : "IMGT_allele", "value" : "IGHD6-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-13" }, { "name" : "Source-Sequence", "value" : "AF062221" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "80.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATSGFTFTDYYMRWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYCSYWYFDDWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.587 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19818:2518 (reversed)", "sequence" : "CGCGCAGGTTCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCCTTATTACTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCTATCCCCTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 34, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 18, 38, 38, 39, 18, 35, 37, 38, 39, 39, 39, 39, 39, 39, 39, 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18, 18, 37, 37, 38, 33, 18, 38, 36, 36, 36, 36, 37, 39, 36, 39, 39, 39, 37, 38, 39, 39, 39, 39, 37, 38, 37, 37, 38, 39, 37, 37, 17, 37, 39, 37, 32, 38, 38, 35, 38, 39, 37, 36, 16, 38, 38, 37, 37, 37, 39, 36, 38, 37, 38, 38, 39, 38, 37, 38, 38, 38, 38, 37, 37, 37, 19, 33, 33, 33, 33, 33, 33, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "APYYYGSSQFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAPYYYGSSQFAYWGQGTLVTVSA" } 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"CGTGGAAGTGAAGGTTGAGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAGCAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCCCTGGAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 38, 37, 38, 38, 38, 37, 37, 38, 37, 36, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 20, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 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37, 37, 38, 38, 39, 38, 37, 37, 36, 38, 38, 38, 38, 38, 38, 33, 32, 31, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRNKANGYTA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGSSFYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : 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"0" }, { "name" : "translation", "value" : "MHWVKQKPGQGPEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKTTLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSP" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARKVWYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGPEWIGYINPYNDGTKYNEKFKGKTTLTSDKSSSTAYMELSSLTSEDSAVYYCARKVWYYAMDYWGQGTSVTVSP" } ] } ] }, { "sequence" : { "name" : "ERR346596.537 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17575:2459 (reversed)", "sequence" : "GGGGGAGGTCCAACTGCAACAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATCTACTATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCATTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 31, 33, 33, 33, 33, 33, 37, 37, 37, 36, 38, 38, 19, 38, 37, 37, 38, 38, 37, 39, 39, 39, 39, 38, 37, 34, 38, 30, 36, 32, 36, 39, 39, 39, 39, 39, 39, 33, 38, 37, 39, 39, 38, 39, 36, 30, 32, 37, 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"ERR346596.540 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16043:2462 (reversed)", "sequence" : "AAGCCAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCCGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAACAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCAGGGGTACGACTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGTGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 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39, 39, 38, 38, 38, 38, 38, 38, 39, 37, 38, 38, 37, 38, 37, 38, 38, 38, 34, 32, 33, 33, 33, 33, 37, 33, 33, 32, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AQGYDWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" 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"GTCTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGGGTGATTACGGTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTCTCATCCATTGGCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 32, 37, 38, 39, 39, 38, 39, 39, 39, 39, 38, 17, 36, 36, 36, 38, 39, 38, 38, 37, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 39, 39, 37, 39, 39, 39, 38, 37, 37, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 37, 36, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 37, 39, 36, 38, 38, 38, 38, 38, 37, 39, 39, 39, 37, 38, 39, 39, 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39, 39, 39, 36, 38, 38, 38, 38, 38, 38, 38, 34, 36, 37, 38, 34, 37, 37, 37, 37, 37, 37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRVITVYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "96.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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37, 38, 33, 37, 38, 33, 37, 32, 32, 33, 37, 37, 37, 37, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"CCTCGAGGTGCAGCTCCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCAGTTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTAATTACTATGGTAATACTAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCGTCTATTACTGTGCAAGATCGGGGTATAGGTACGAGGATTACTATGCTATGGACTACTGGGGTCAAGGAGCCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCACTGATAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 32, 33, 34, 34, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 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38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNYYGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGASVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGYRYEDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGSSYTFTDYAMHWVKQSHAKSLEWIGVISNYYGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAVYYCARSGYRYEDYYAMDYWGQGASVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.557 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15675:2495 (reversed)", "sequence" : "ATTCGAGGTGAAGCTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGTATGGTAAAATAACCCGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCTTGGAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 34, 39, 39, 39, 39, 38, 37, 36, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 35, 38, 39, 39, 39, 39, 39, 39, 39, 36, 39, 38, 34, 38, 39, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 33, 38, 39, 39, 39, 37, 39, 37, 39, 37, 39, 19, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 33, 36, 39, 38, 38, 39, 38, 37, 37, 38, 34, 37, 27, 36, 38, 36, 38, 39, 39, 39, 39, 33, 37, 39, 39, 39, 36, 34, 36, 38, 38, 15, 35, 31, 38, 39, 39, 38, 39, 38, 38, 38, 34, 14, 37, 33, 37, 37, 37, 39, 38, 39, 37, 37, 38, 36, 27, 34, 39, 37, 35, 36, 39, 39, 38, 39, 34, 25, 15, 27, 38, 37, 33, 38, 39, 33, 15, 38, 38, 39, 39, 38, 38, 38, 39, 37, 38, 37, 38, 37, 36, 31, 38, 35, 34, 32, 24, 34, 34, 36, 33, 26, 39, 38, 38, 37, 37, 38, 36, 39, 38, 37, 37, 38, 38, 37, 37, 38, 38, 37, 38, 36, 39, 39, 37, 16, 31, 37, 38, 37, 37, 39, 37, 37, 37, 29, 37, 39, 39, 37, 37, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 37, 39, 37, 34, 37, 35, 39, 39, 39, 39, 39, 39, 38, 38, 38, 33, 38, 39, 39, 38, 39, 37, 39, 38, 39, 39, 39, 39, 37, 37, 36, 38, 37, 35, 36, 32, 37, 39, 39, 37, 38, 18, 38, 39, 39, 39, 38, 37, 39, 37, 32, 38, 38, 38, 39, 39, 39, 38, 37, 37, 33, 38, 36, 39, 39, 36, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 37, 37, 39, 38, 39, 37, 38, 39, 37, 36, 39, 38, 38, 36, 37, 32, 16, 18, 32, 38, 32, 38, 39, 38, 36, 36, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 32, 33, 33, 37, 37, 37, 32, 32, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGKITRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVKPGGSLKLSCAASGFTFSNYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARSYGKITRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.558 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16791:2496 (reversed)", "sequence" : "GATGGAGGTCCAGCTGCAACAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCACCGTATGACTACGGTAGTAGCTAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTTTATCCCCTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 30, 32, 37, 37, 33, 33, 37, 37, 37, 38, 38, 38, 37, 38, 33, 33, 37, 32, 38, 37, 38, 38, 39, 37, 37, 38, 36, 36, 37, 37, 38, 39, 38, 37, 39, 39, 39, 20, 20, 36, 39, 39, 17, 37, 38, 34, 36, 38, 38, 38, 39, 33, 38, 37, 33, 37, 37, 18, 38, 38, 39, 39, 39, 39, 39, 39, 36, 32, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 18, 33, 33, 37, 37, 33, 19, 31, 33, 18, 33, 33, 37, 37, 37, 18, 33, 18, 37, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 37, 18, 19, 34, 33, 37, 37, 39, 38, 38, 38, 38, 36, 33, 33, 38, 39, 39, 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GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.81%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKAKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", 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"ERR346596.642 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17396:2578 (reversed)", "sequence" : "CCGTGAGGTTCAGCTGCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGATACGATGGTTACTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTTATCCCCTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 33, 34, 32, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDGYYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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"94.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.644 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18808:2579 (reversed)", "sequence" : "AAGCCAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGATACATCTTCACCACCTACTGGATTCACTGGGTAAAACAGAGGTCTGGACAGGGCCTTGAGTGGATTGCAAGGATTTATCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGAAATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGTCCCCTCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCTATCCCCTGTAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 34, 39, 39, 39, 38, 38, 39, 38, 39, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 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38, 38, 38, 38, 38, 38, 38, 38, 37, 36, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 32, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELVKPGASVKLSCTVF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKSTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VDPANGNS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" 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"name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTDYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYCGSYGNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.604 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16196:2531 (reversed)", "sequence" : "GACGGAGGTCCAACTGCAACAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGATACGATGGTTACTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCATTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 35, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 38, 38, 38, 38, 35, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 18, 37, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 37, 39, 39, 39, 39, 18, 37, 35, 37, 38, 39, 38, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 37, 37, 37, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 35, 38, 39, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 38, 38, 39, 39, 37, 39, 39, 38, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 38, 37, 37, 34, 36, 33, 38, 38, 34, 38, 39, 37, 17, 17, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 36, 39, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 37, 34, 37, 37, 37, 32, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDGYYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.606 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19794:2533 (reversed)", "sequence" : "CTGTGAAGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAACAACAACCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGACTACTACGGTAGTAGTTACATTGGTTACTGGGGCCAGGGGACTCTGGTCACTGTCTCTACAGCCAAAACAACAGCCCCATCGGTTTATCCACTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 33, 37, 37, 37, 37, 37, 38, 32, 38, 38, 37, 32, 37, 36, 38, 38, 39, 39, 39, 37, 38, 33, 36, 32, 15, 36, 36, 36, 36, 37, 33, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 37, 34, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 16, 35, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 36, 38, 37, 39, 39, 39, 39, 38, 38, 39, 38, 36, 38, 38, 38, 38, 14, 37, 38, 37, 38, 38, 14, 14, 27, 37, 38, 37, 38, 38, 38, 39, 37, 38, 37, 38, 39, 38, 38, 36, 38, 19, 37, 30, 34, 34, 30, 38, 38, 38, 39, 16, 28, 23, 37, 35, 25, 24, 39, 34, 27, 37, 34, 28, 35, 23, 35, 37, 38, 37, 39, 37, 34, 39, 38, 38, 39, 38, 34, 25, 34, 33, 39, 39, 38, 37, 39, 38, 38, 38, 39, 39, 38, 38, 38, 13, 34, 35, 35, 26, 25, 38, 37, 38, 33, 37, 27, 34, 25, 37, 38, 27, 37, 38, 37, 29, 33, 37, 37, 16, 39, 37, 39, 39, 37, 37, 14, 26, 32, 37, 37, 38, 37, 37, 30, 37, 37, 33, 27, 16, 37, 37, 38, 33, 38, 39, 37, 38, 38, 17, 17, 30, 18, 38, 18, 37, 37, 33, 18, 18, 18, 33, 37, 38, 37, 39, 39, 39, 39, 37, 37, 39, 38, 38, 38, 33, 36, 37, 37, 35, 19, 35, 36, 39, 38, 31, 18, 18, 33, 35, 37, 35, 39, 38, 33, 19, 38, 38, 39, 37, 38, 37, 38, 37, 38, 39, 36, 35, 38, 35, 36, 33, 37, 39, 39, 39, 38, 38, 35, 38, 37, 36, 35, 36, 38, 38, 37, 32, 38, 39, 38, 39, 39, 37, 39, 39, 39, 38, 38, 39, 35, 39, 39, 39, 39, 37, 39, 37, 38, 32, 37, 20, 39, 38, 39, 39, 38, 39, 39, 39, 38, 32, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 37, 37, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 35, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNANNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYYGSSYIGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.97%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSNYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNANNNLYLQMSSLKSEDTAMYYCARDYYGSSYIGYWGQGTLVTVST" } ] } ] }, { "sequence" : { "name" : "ERR346596.607 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14633:2533 (reversed)", "sequence" : "GCTTCAGGTTCAGCTCCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGCTACTAACTACAATGAGAAGTTCAAGGCCAAGGCAACACTGACTGCAGACAAATCATCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAGGGGGGGTTGTCACTCAGAAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCCTATCCACTGAACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 36, 39, 38, 38, 39, 39, 38, 39, 33, 38, 39, 38, 37, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 37, 39, 38, 39, 38, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 34, 37, 37, 39, 24, 3, 38, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 36, 38, 38, 25, 37, 37, 39, 39, 39, 38, 37, 34, 38, 38, 34, 34, 34, 37, 38, 38, 39, 38, 39, 38, 39, 38, 38, 36, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 37, 37, 38, 33, 38, 38, 15, 38, 38, 39, 39, 39, 39, 38, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 38, 34, 34, 34, 38, 38, 39, 37, 37, 37, 37, 38, 38, 37, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 38, 38, 36, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 36, 37, 39, 37, 37, 38, 37, 34, 37, 37, 34, 39, 34, 39, 37, 34, 38, 39, 38, 36, 32, 38, 38, 38, 37, 36, 38, 37, 36, 36, 38, 38, 39, 38, 37, 38, 37, 38, 38, 37, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKAKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGVVTQKFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 292, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FS" }, { "name" : "translation", "value" : "SR" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AF062226" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGATNYNEKFKAKATLTADKSSSTAYMQLSSLTSDDSAVYFCAGGVVTQKFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.608 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15193:2533 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAAGAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTTGAGTGGATTGGAGTTATTTGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGATACGATGGTGACTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTTATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 32, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 16, 16, 33, 36, 38, 39, 39, 39, 39, 38, 38, 39, 38, 38, 34, 37, 39, 39, 39, 39, 39, 39, 16, 32, 38, 36, 38, 37, 34, 37, 36, 34, 33, 36, 38, 37, 33, 35, 38, 39, 33, 35, 37, 39, 39, 37, 39, 38, 17, 37, 39, 38, 38, 36, 38, 38, 34, 15, 37, 37, 16, 36, 38, 14, 36, 32, 15, 16, 37, 38, 38, 39, 16, 17, 33, 33, 37, 35, 38, 38, 35, 38, 37, 16, 37, 17, 37, 36, 37, 37, 16, 33, 37, 39, 39, 37, 36, 37, 38, 38, 38, 39, 39, 15, 37, 38, 37, 16, 37, 39, 16, 37, 37, 37, 37, 15, 37, 38, 39, 39, 17, 27, 17, 33, 37, 39, 38, 16, 37, 38, 39, 39, 37, 37, 24, 27, 35, 38, 39, 2, 31, 29, 31, 31, 37, 22, 17, 36, 32, 16, 34, 38, 39, 33, 26, 37, 33, 33, 33, 37, 16, 37, 37, 35, 37, 37, 37, 38, 27, 15, 26, 37, 15, 27, 26, 14, 22, 38, 25, 27, 35, 38, 23, 32, 38, 32, 36, 36, 32, 2, 27, 39, 38, 26, 25, 34, 38, 33, 39, 2, 15, 38, 35, 26, 37, 39, 36, 38, 34, 15, 34, 2, 33, 35, 31, 16, 33, 34, 39, 37, 24, 16, 34, 37, 4, 38, 37, 37, 38, 38, 35, 37, 27, 16, 15, 38, 37, 35, 37, 33, 39, 39, 38, 38, 31, 37, 38, 37, 37, 38, 39, 39, 39, 35, 38, 27, 14, 36, 34, 37, 37, 29, 33, 16, 37, 33, 17, 17, 35, 36, 33, 16, 37, 37, 37, 17, 29, 36, 15, 38, 39, 38, 32, 34, 33, 29, 37, 16, 31, 17, 38, 36, 38, 37, 30, 39, 38, 35, 38, 33, 38, 37, 33, 17, 37, 37, 16, 39, 39, 38, 38, 37, 37, 37, 33, 16, 39, 37, 39, 37, 37, 33, 39, 37, 36, 33, 39, 35, 37, 34, 39, 38, 38, 38, 37, 36, 36, 33, 37, 34, 33, 38, 39, 39, 30, 37, 39, 39, 38, 39, 39, 39, 39, 38, 36, 36, 38, 39, 38, 36, 36, 15, 32, 16, 38, 37, 16, 16, 32, 32, 35, 35, 35, 32, 37, 32, 32, 32, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ICTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDGDYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TVTTFPVDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "TVT" }, { "name" : "IMGT_allele", "value" : "IGHD4-17*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-17" }, { "name" : "Source-Sequence", "value" : "AF062181" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVICTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGDYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.609 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13239:2534 (reversed)", "sequence" : "ACACGAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCCACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGTTACTAGCTACAGCCAGAACTTCAAGGGCAAGGCCACATTAACTGTAGGCAAGTCATCCAGCACAGCCTACATGGAGGTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAAGGGGATATAGGTACGACCGGGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCATTGCGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 38, 38, 39, 39, 39, 37, 39, 37, 39, 39, 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} ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSPRLSCATSGFTFSDFYMEWVRQPPGKRLEWIAASRNKANDYTTEYSASVKGRFIVSRATSQSILYLQMNALRAEDTAIYYCARDYYYGAMDDWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.612 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17694:2540 (reversed)", "sequence" : "TACTCAGGTCCAGCTTCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGATACGATGGTTACTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCTTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.613 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17781:2541 (reversed)", "sequence" : "TACAGAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGAACTTCAATGAACATATCCTGCAAGACTTCTGGTGACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGTTACAACCAGAAGTTCAAGGGCAAGGCCACAATAACTGTAGACAAGTCATCCAGTAAAGCCTTCATGGAGCTCCTCAGTCGGACATCTGAGGACTCTGCAGTCGATTACTGGGCAAGAGGGGGGGTTCGGGGGAAGTACTACTTTGACTACTGGGGCCAAGGCACACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 32, 35, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 19, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 33, 34, 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"0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GDSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "SYNQKFKGKATITVDKSSSKAFMELLSRTSEDSAVDYW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : 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33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKMSCKAF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IEGMKQNHGKSLGWVGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLRLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TKPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTFMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLRLSSLTSEDTAVYYCTKPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.625 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19506:2557 (reversed)", "sequence" : 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36, 36, 38, 38, 39, 37, 37, 38, 32, 37, 37, 37, 36, 37, 36, 37, 32, 31, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHWVKQRSGRGLEWIAR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { 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"min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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: "ERR346596.761 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15044:2712 (reversed)", "sequence" : "TGGTCAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGTGAGGAACTGGGCCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTCATCCACTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 36, 38, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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"AAGAGAGGTGAAGCTGATGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTGCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATGAGGTATTACAAAGTACTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCTATCCACTGAGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 33, 37, 33, 33, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 20, 37, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 37, 33, 38, 38, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 37, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, 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"IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDEVLQSTYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.503 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13159:2409 (reversed)", "sequence" : 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38, 38, 39, 38, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 33, 38, 36, 39, 38, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 37, 36, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 32, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGAEQMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDALVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLNGNNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGTSYNQKFKGKATLTVDTSSSTAFMELHSLTSEDALVYYCARQLNGNNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.691 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14586:2629 (reversed)", "sequence" : "GTCGCAGGTTCAGCTTCAGCAATCTGGAGCTGGGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTGTACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAGTCGTATGGTAACTATTTGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGTAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 20, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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39, 39, 39, 39, 38, 37, 38, 30, 38, 37, 39, 37, 32, 36, 36, 16, 36, 36, 36, 36, 36, 37, 39, 37, 38, 39, 39, 37, 38, 39, 36, 37, 38, 33, 36, 38, 36, 38, 38, 38, 36, 36, 18, 16, 34, 37, 38, 39, 39, 36, 36, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 35, 39, 38, 36, 37, 38, 38, 38, 38, 38, 34, 38, 32, 32, 33, 33, 37, 37, 37, 33, 32, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAGLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHESYGNYLYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAGLVKPGASVKLSCKASGYTFTEYIVHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHESYGNYLYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.692 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13577:2631 (reversed)", "sequence" : "GTATCAGGTGCAGCTGAAGCAGTCTGGACCTGACCTGGTGAAACCTTCGCAGTCACTGTCACTCACCTGCCCTGTCTCTGGCTACTCCTTCACCAGTTATTATAGCTGGTATTGGATACGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTTTATACATTACAGTGGTATCACTGTCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAATAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTATGCAAGATTCGCCGGGGCCACCTACACTATTGACCACCGGGGCCAAGGAACCTCAGTCACCGGCTCCACAGCCAAAACAACACCCCCATCTGTCCATCCCTTGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 29, 16, 29, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 34, 16, 33, 38, 38, 38, 38, 39, 39, 16, 32, 15, 16, 33, 38, 37, 15, 15, 32, 15, 35, 34, 15, 33, 15, 16, 16, 16, 16, 33, 37, 16, 33, 14, 14, 14, 14, 33, 32, 16, 36, 35, 16, 17, 16, 17, 16, 35, 37, 15, 38, 32, 37, 38, 32, 15, 14, 16, 15, 16, 16, 17, 35, 33, 32, 38, 36, 38, 39, 39, 16, 37, 16, 16, 33, 16, 31, 16, 16, 16, 29, 33, 16, 33, 37, 37, 17, 17, 33, 17, 16, 37, 16, 15, 33, 16, 17, 17, 17, 31, 16, 16, 17, 33, 14, 29, 14, 29, 36, 15, 16, 33, 17, 17, 33, 16, 15, 14, 15, 15, 33, 27, 14, 15, 14, 27, 33, 27, 15, 16, 27, 33, 16, 16, 16, 25, 37, 14, 15, 27, 12, 13, 16, 29, 35, 37, 17, 15, 29, 16, 16, 16, 31, 37, 38, 39, 38, 38, 39, 16, 31, 16, 30, 16, 16, 16, 28, 37, 38, 38, 39, 25, 27, 37, 37, 32, 37, 35, 27, 37, 34, 38, 38, 38, 26, 37, 14, 37, 38, 37, 33, 15, 37, 35, 35, 28, 26, 28, 34, 35, 39, 39, 24, 34, 38, 37, 34, 34, 26, 38, 38, 33, 34, 37, 37, 34, 15, 26, 37, 37, 34, 34, 38, 37, 33, 38, 37, 38, 38, 27, 27, 34, 26, 35, 37, 26, 27, 15, 38, 27, 16, 37, 29, 16, 16, 16, 16, 16, 37, 33, 37, 27, 16, 16, 35, 16, 37, 38, 37, 15, 37, 32, 38, 38, 39, 37, 38, 16, 35, 16, 33, 37, 30, 27, 29, 17, 16, 16, 17, 17, 17, 14, 27, 14, 14, 14, 14, 29, 14, 14, 14, 15, 15, 14, 16, 16, 16, 39, 39, 37, 17, 37, 38, 37, 17, 37, 33, 16, 14, 30, 14, 29, 14, 14, 29, 14, 33, 15, 16, 16, 17, 37, 16, 35, 15, 37, 33, 16, 16, 16, 17, 16, 37, 32, 14, 14, 32, 14, 15, 14, 38, 15, 33, 15, 34, 39, 37, 38, 39, 39, 37, 38, 38, 34, 32, 36, 38, 36, 30, 38, 39, 38, 38, 38, 33, 37, 16, 33, 16, 16, 38, 37, 32, 32, 34, 33, 16, 34, 29, 16, 16, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPDLVKPSQSLSLTCPVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WYWIRQFPGNKLEWMGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYY" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "RGQGTSVTGST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ARFAGATYTIDH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "25" }, { "name" : "Source-Identity", "value" : "91.47%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPDLVKPSQSLSLTCPVSGYSFTSYYSWYWIRQFPGNKLEWMGFIHYSGITVYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYYARFAGATYTIDHRGQGTSVTGST" } ] } ] }, { "sequence" : 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39, 39, 39, 38, 39, 38, 38, 37, 36, 38, 38, 39, 38, 38, 38, 32, 38, 37, 38, 38, 38, 37, 37, 37, 37, 37, 33, 35, 33, 33, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTTYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKASGYSFTSYWINWIKQRPGQGLEWIGRIAPGSDTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARFPFYYGSSFYYFDYWGQGTTPTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.595 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15134:2525 (reversed)", "sequence" : "CGCTGAGGTCCAACTGCAACAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGGCTACGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTCCATCCCTTGCGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 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"GGACCAGGTGCAGCTGAAGCAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACAAATTCACTGACTATGAGATGCACTGGGTGAAACAGACACCTGTGCATGGCCTGGAATGGATTGGATCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAACTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCACCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATCACTGTACAAGAGAAGGGATCTACTTTGGTTACGACGTACCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCCCCTCAGCCAAAACGACACCCCCATCTGTTTATCCACTGATCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 34, 37, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 37, 37, 36, 38, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 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38, 36, 37, 38, 39, 38, 38, 38, 38, 38, 35, 38, 38, 38, 35, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVRPGASVTLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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39, 38, 37, 38, 38, 38, 38, 39, 38, 38, 38, 34, 38, 38, 37, 37, 37, 34, 32, 30, 33, 33, 33, 35, 33, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGAGTTGTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTGTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.600 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16759:2528 (reversed)", "sequence" : "TGCACAGGTTCAGCTGCAGCAATCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAATTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGATGAGCACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGGTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 38, 38, 39, 38, 38, 38, 35, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 31, 35, 38, 39, 39, 37, 39, 39, 39, 38, 37, 36, 39, 39, 39, 38, 38, 37, 39, 38, 38, 38, 39, 39, 36, 38, 38, 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38, 38, 38, 36, 39, 36, 37, 38, 37, 38, 38, 38, 37, 37, 37, 32, 32, 33, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYDPKFQGKATITADTSSNTGNLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AMAVYYGNDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTYIHWVKQRPEQGLEWIGGIDPANGNTRYDPKFQGKATITADTSSNTGNLQLSSLTSEDTAVYYCAMAVYYGNDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.727 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14061:2674 (reversed)", "sequence" : "CGGCGAAGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGCTAACTGGGAAGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCATTGGCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 39, 38, 39, 39, 37, 36, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 36, 36, 37, 39, 39, 36, 39, 39, 39, 39, 39, 39, 38, 37, 18, 37, 38, 39, 39, 39, 38, 39, 39, 39, 37, 38, 18, 37, 38, 39, 39, 37, 38, 39, 38, 39, 18, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 34, 34, 38, 38, 39, 39, 39, 39, 39, 39, 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37, 38, 38, 38, 38, 38, 32, 37, 16, 37, 37, 37, 33, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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"96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGLTGKDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.728 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12612:2675 (reversed)", "sequence" : "TTGCGAGGTGCACCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGAATGGTAACAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 33, 33, 33, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 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"ACATGATGTACAGCTTCAGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCTTCACTAACTACTGGATAGGTTGGGTAGCGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTAATTGTGGAGGTGGTTATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 33, 38, 39, 37, 39, 39, 39, 37, 37, 39, 39, 37, 37, 38, 37, 37, 39, 39, 39, 38, 39, 38, 38, 39, 39, 37, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 35, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 39, 38, 38, 30, 38, 37, 39, 38, 38, 34, 37, 38, 39, 38, 35, 37, 37, 37, 37, 38, 39, 38, 39, 39, 38, 37, 37, 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"INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSYGNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTDYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELRSLTSEDSAVYYCGSYGNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.741 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13516:2694 (reversed)", "sequence" : "CTGCCAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTTTATCCCCTGGTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 38, 36, 38, 17, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 30, 37, 39, 39, 37, 39, 37, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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"ERR346596.746 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14395:2703 (reversed)", "sequence" : "GGGTCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCCATCCCTTGCTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 38, 33, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 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"GCGGGAGGTGCAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTTAGTGAAGATATCCTGCAAGGCTTCTGGTTACACCTTCACAACCTACGATATAAATTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTCTCCTGGAGATGGTAATACTAACTACAATGAGAAATTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGTACAGCCTACATGCAGCTCAGCAGCCTGACTTCTGAGAACTCTGCCGTCTATTTCTGTGCAAGAGGAGGGGATTACCACTACTTGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCACTGTAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 30, 35, 30, 33, 32, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 18, 37, 37, 39, 39, 39, 39, 39, 37, 18, 36, 36, 37, 38, 39, 39, 38, 38, 38, 38, 39, 39, 33, 37, 38, 39, 35, 20, 35, 32, 38, 39, 39, 33, 38, 38, 39, 38, 38, 39, 39, 36, 37, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 37, 37, 37, 37, 38, 38, 37, 38, 39, 38, 38, 38, 39, 18, 36, 36, 38, 38, 38, 38, 37, 39, 37, 37, 38, 39, 37, 32, 36, 38, 36, 37, 37, 37, 37, 38, 18, 36, 37, 38, 36, 38, 38, 36, 17, 37, 17, 14, 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38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGALVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"GGGACAGGTGCAGCTGAAGGAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTAGTTCTGTGCAAGAAGGAGGGGTAACTGGGAGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCATTGGGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 34, 39, 39, 38, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 35, 39, 39, 39, 38, 37, 38, 39, 39, 38, 33, 37, 38, 39, 39, 38, 37, 39, 38, 37, 39, 39, 38, 33, 38, 38, 38, 37, 39, 38, 39, 38, 39, 39, 38, 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38, 38, 38, 37, 37, 37, 37, 37, 30, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVKQRPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRRGNWEAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" 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37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRDYDWVPDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDYDWVPDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.753 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12206:2709 (reversed)", "sequence" : "TGGAGAGGTGCAGCTTCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCACTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 33, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 37, 32, 36, 38, 38, 38, 38, 38, 37, 37, 39, 39, 37, 39, 38, 36, 38, 39, 39, 37, 32, 37, 39, 37, 36, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 36, 38, 39, 38, 39, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 36, 38, 38, 38, 34, 30, 37, 38, 38, 34, 38, 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGRYDERSDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVEPGGDLVKPGGSLKLSCAASGFTFSTYGMSWVRQTPDKRLEWVATINSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRRGRYDERSDMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.755 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21148:2710 (reversed)", "sequence" : "GGCCCAGGTGCAGCTGAAGGAGTCTGGAGCCGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGATTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGTTACTACTAACTACAATGGGAGGTTCAAGGGCATGGCCACATTCACTGCAGGTACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGAGATCATTTTGACCACTGGGGCCCAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGGTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 39, 39, 39, 39, 39, 38, 34, 37, 38, 38, 37, 37, 38, 37, 38, 33, 38, 37, 39, 34, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 37, 39, 39, 39, 20, 38, 37, 37, 39, 39, 39, 39, 39, 17, 37, 18, 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39, 37, 38, 37, 37, 18, 38, 37, 37, 35, 37, 37, 39, 37, 37, 39, 36, 37, 37, 34, 33, 38, 39, 39, 36, 16, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 35, 38, 38, 38, 38, 34, 38, 38, 38, 36, 36, 17, 32, 33, 33, 32, 32, 37, 33, 32, 32, 32, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWIKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGRFKGMATFTAGTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSVTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGPGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDHFDH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "53" }, { "name" : "Source-Identity", "value" : "81.97%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELMKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPGSVTTNYNGRFKGMATFTAGTSSNTAYMQLSSLTSEDSAVYYCARDHFDHWGPGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.756 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9879:2711 (reversed)", "sequence" : "ACAGGAGGTACAGCTTCAGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGCTATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTACTTTTTGAACTGGGTGAGGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGCATTAATCCTTTCAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTACCACAGCCCACATGGAGCTCCTGGGCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGATGGGGTGATGGTTACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGTACC", 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"translation", "value" : "EVQLQESGPDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNWVRQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSTTAHMELLGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPFNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"CGATCAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTACCTACTGGATACACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTAATACTGAGTACAATCAGAAGTTCAGGGACAGGGCCACATTGACTGCAGACAAATCCTCCAGCACACCCTACATGCAACTGAGCAGCCTGACCTCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATTACGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCATTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 33, 37, 36, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 37, 37, 38, 39, 38, 39, 38, 39, 39, 38, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 30, 37, 38, 37, 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37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTTYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFRDRATLTADKSSSTPYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ANYYYGSHFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { 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32, 33, 33, 33, 32, 33, 33, 31, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGALVQPGGSRELSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MAWVRQAPGKGPEWAAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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38, 38, 37, 16, 38, 38, 36, 16, 16, 38, 37, 33, 37, 37, 37, 37, 32, 32, 16, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPDLVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWAKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSRTAEDSAVYYW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSDRYSDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPDLVKPGASVKVSCKASGYSFTDYYMHWAKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSRTAEDSAVYYWARGDYGSSDRYSDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.671 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21437:2605 (reversed)", "sequence" : "NGCGGAGGTCCAACTGCAACAATCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTACTACCATCTACTATGCAGACACAGTGAAGGGCCGATCCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGATTCAAGTGGGGGCCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCTATCCATTGGATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 32, 32, 33, 33, 33, 33, 33, 37, 37, 37, 32, 37, 38, 37, 38, 38, 37, 38, 38, 36, 38, 38, 39, 37, 39, 38, 38, 34, 36, 34, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 38, 36, 39, 36, 37, 36, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 34, 38, 35, 38, 37, 39, 37, 39, 39, 37, 37, 39, 37, 36, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 38, 39, 38, 39, 38, 37, 38, 14, 34, 38, 38, 39, 39, 37, 39, 35, 35, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 37, 38, 39, 37, 38, 37, 39, 39, 39, 39, 39, 38, 37, 39, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 38, 35, 37, 38, 37, 37, 38, 37, 36, 39, 39, 39, 38, 37, 37, 37, 37, 37, 39, 38, 37, 39, 39, 39, 39, 38, 33, 34, 33, 37, 38, 37, 39, 39, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 35, 33, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 34, 30, 38, 38, 39, 37, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 33, 39, 39, 39, 39, 38, 34, 38, 38, 36, 39, 38, 39, 39, 39, 37, 38, 38, 39, 39, 39, 38, 38, 38, 36, 36, 37, 36, 37, 38, 39, 39, 37, 37, 39, 39, 39, 38, 39, 37, 39, 39, 37, 37, 38, 36, 36, 32, 37, 34, 36, 39, 37, 36, 34, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 37, 37, 36, 36, 38, 38, 39, 37, 34, 38, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 34, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSRKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRSTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSTTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFKWGPMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSRKLSCTASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSTTIYYADTVKGRSTISRDNPKNTLFLQMTSLRSEDTAMYYCARFKWGPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.672 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12135:2607 (reversed)", "sequence" : "AGTCCAGGTCCAGCTGCAGCAATCTGACGCTGAGTTGGTGAAACCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGAAGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTAAAAGATCTGATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCTTGGCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 32, 32, 16, 35, 37, 37, 37, 34, 37, 37, 38, 37, 38, 37, 37, 16, 38, 37, 38, 37, 39, 39, 39, 39, 34, 37, 36, 36, 38, 38, 34, 15, 37, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 36, 36, 32, 38, 39, 37, 16, 38, 39, 35, 17, 32, 16, 38, 16, 35, 38, 39, 39, 39, 37, 36, 36, 37, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 33, 38, 37, 39, 15, 37, 38, 39, 38, 37, 37, 37, 16, 37, 15, 37, 37, 38, 39, 39, 39, 39, 33, 17, 17, 31, 33, 38, 39, 39, 38, 36, 38, 16, 29, 37, 36, 38, 37, 39, 37, 38, 38, 39, 39, 38, 33, 37, 16, 37, 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYNFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HKNEKFKTKATLTVDTSSSTAYMQLSSLASEDSAPYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, 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"EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.808 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12395:2747 (reversed)", "sequence" : "TACCGAGGTGCAACTGGTGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGAAGGCTATGGTTACGACGAAAGGGGTCATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTTCATCTGCTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 32, 33, 33, 33, 32, 37, 37, 20, 38, 38, 38, 33, 32, 37, 17, 32, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 39, 38, 38, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 37, 39, 39, 39, 39, 39, 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGYGYDERGHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCAREGYGYDERGHAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.809 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13661:2747 (reversed)", "sequence" : "GGTTGAGGTGAAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCGAACTGATGACACAGCCACGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCATTGTCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 33, 37, 38, 38, 38, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 37, 36, 39, 39, 33, 38, 38, 37, 39, 37, 38, 39, 38, 33, 39, 39, 36, 39, 39, 39, 39, 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37, 38, 39, 39, 38, 38, 38, 38, 39, 34, 36, 37, 39, 39, 39, 38, 38, 39, 38, 38, 39, 34, 37, 37, 34, 36, 39, 32, 38, 36, 36, 36, 36, 18, 38, 37, 38, 38, 39, 39, 38, 39, 38, 38, 36, 34, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 34, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLRTDDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLRTDDTATYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, 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37, 37, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQGSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"sequence" : "GTTTCAGGTCCAGCTGCAGCAGTCTGGAGCCGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGTTACTGGATAGAGTGGATTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGTTACTACTAACTACAATGGGAGGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGAGATCATTTTGACTACTGGGGCCCAGGCACCACTCTCACAGTCTCTTCAGCCAAAACGACACCCCCATCGGCTCATCCACTGTTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 18, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 33, 37, 37, 33, 37, 38, 37, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWIKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGRFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSVTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGPGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDHFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : 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"QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPGSVTTNYNGRFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARDHFDYWGPGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.821 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21603:2760 (reversed)", "sequence" : "AGGCGATGTAAAGCTTCAGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCCGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACGGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCATTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 37, 38, 39, 38, 38, 36, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 36, 37, 39, 38, 38, 38, 39, 37, 38, 38, 38, 36, 37, 38, 39, 39, 38, 39, 37, 37, 37, 38, 39, 39, 39, 39, 38, 39, 37, 38, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 37, 37, 35, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 24, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 37, 37, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 37, 37, 38, 38, 38, 35, 34, 37, 38, 38, 38, 38, 39, 38, 37, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 37, 39, 37, 39, 37, 33, 39, 38, 38, 37, 39, 34, 37, 39, 38, 30, 35, 33, 39, 39, 38, 33, 35, 35, 17, 38, 36, 38, 37, 30, 30, 34, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 33, 38, 37, 37, 39, 39, 38, 38, 35, 38, 38, 39, 38, 38, 39, 38, 36, 34, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 34, 38, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 33, 38, 39, 38, 38, 38, 38, 39, 36, 39, 38, 37, 38, 38, 39, 39, 38, 39, 38, 38, 38, 37, 37, 39, 36, 36, 32, 38, 38, 39, 38, 38, 38, 37, 38, 37, 38, 38, 36, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARAITDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.822 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10660:2761 (reversed)", "sequence" : "AATTCAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACTACTACATGAAATGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATGTTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAGATCCTCCAGCACAGCCTACATGCAGCTCGACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCCCACTATGGTTACTACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCCTTGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 37, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 37, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 37, 39, 39, 38, 37, 38, 38, 39, 39, 39, 37, 37, 39, 38, 39, 39, 36, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 37, 37, 38, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 37, 39, 37, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 38, 39, 39, 38, 35, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 38, 39, 39, 37, 39, 37, 37, 36, 31, 38, 38, 38, 37, 39, 37, 37, 39, 36, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 35, 33, 39, 39, 37, 37, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 38, 38, 36, 36, 37, 37, 34, 36, 37, 39, 39, 38, 37, 37, 39, 39, 36, 39, 39, 39, 39, 38, 37, 39, 36, 36, 36, 37, 36, 30, 38, 38, 38, 32, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 36, 38, 38, 35, 39, 37, 38, 37, 33, 38, 35, 37, 35, 32, 38, 33, 19, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDRSSSTAYMQLDSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSHYGYYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTDYYMKWVKQSHGKSLEWIGDVNPYNGDTFYNQKFKGKATLTVDRSSSTAYMQLDSLTSEDSAVYYCARSHYGYYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.762 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10551:2713 (reversed)", "sequence" : "TCATGAGGTGCAACTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTTAGTGGATACTGGATGACTTGGGTAAGGCAGGGTCCTGGGAAGGGACTAGAATGGATTGGAGACATTAATCCAGATAGCAGGACGATAAACTATAAGCCATCTCTAAAGGAGAAATTAATCATGTCCAGAGACAACGCCAAAAATACGCTGTGCCTGCAAATGAGCGAAGTGAGATCTGAGTACACAGCCCTTTAGAACTGTGCAAGAAATGGTTACTACGGCTGGATGACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGCTTATCCACTGGTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 18, 32, 32, 37, 37, 37, 37, 33, 37, 37, 34, 19, 38, 38, 34, 33, 33, 17, 32, 37, 39, 39, 39, 39, 39, 37, 38, 30, 37, 39, 34, 17, 37, 38, 38, 39, 39, 17, 18, 32, 37, 38, 39, 39, 39, 39, 17, 37, 30, 17, 33, 38, 17, 17, 33, 37, 38, 38, 18, 33, 38, 18, 20, 33, 38, 39, 39, 20, 32, 20, 20, 35, 34, 16, 37, 37, 18, 37, 38, 20, 37, 31, 37, 16, 16, 30, 33, 37, 31, 38, 36, 37, 18, 36, 18, 33, 38, 34, 38, 37, 37, 38, 39, 18, 37, 36, 19, 33, 38, 39, 32, 36, 30, 18, 33, 18, 33, 37, 36, 14, 14, 30, 37, 36, 18, 37, 38, 36, 15, 33, 14, 30, 36, 14, 30, 37, 15, 33, 38, 16, 37, 38, 24, 34, 38, 38, 38, 39, 39, 38, 33, 15, 31, 37, 38, 26, 30, 37, 38, 37, 10, 30, 26, 16, 27, 12, 37, 12, 29, 32, 33, 35, 34, 38, 34, 14, 27, 13, 38, 23, 38, 35, 39, 38, 25, 15, 10, 34, 15, 34, 15, 19, 35, 23, 28, 34, 38, 39, 27, 15, 28, 34, 28, 25, 15, 2, 35, 15, 27, 15, 26, 24, 38, 34, 20, 29, 26, 24, 27, 33, 33, 37, 27, 15, 2, 26, 34, 15, 2, 27, 24, 30, 2, 34, 38, 32, 32, 24, 15, 32, 12, 38, 39, 38, 37, 17, 17, 33, 16, 14, 14, 14, 14, 30, 16, 33, 16, 16, 35, 33, 33, 16, 17, 16, 27, 16, 16, 37, 33, 29, 36, 37, 33, 14, 15, 30, 14, 16, 16, 16, 17, 33, 33, 17, 17, 33, 15, 33, 16, 37, 33, 16, 16, 17, 31, 37, 33, 16, 37, 16, 38, 37, 33, 14, 38, 36, 36, 36, 14, 15, 37, 37, 37, 37, 17, 37, 17, 32, 39, 38, 39, 39, 36, 36, 38, 38, 39, 37, 38, 38, 32, 33, 37, 39, 39, 38, 14, 37, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 38, 38, 16, 38, 39, 37, 37, 39, 38, 37, 16, 39, 39, 39, 39, 39, 39, 39, 36, 36, 15, 37, 39, 38, 37, 38, 37, 37, 16, 38, 36, 32, 37, 37, 37, 37, 37, 33, 16, 32, 32, 32, 32, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQGPGKGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWMTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : 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"ATGTCAGGTTCAGCTCCAGCAGTCTGGACCTTACCTGGTGAAGCCTGGGACTTCAGTGAAGATTTCCTGCAAGACTTCTGGATACATATTCACTGACTACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTGTTAATCCTAACAGTGGTGCTGGTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTAACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCAATTTATAACTACTATTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCCCTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 17, 38, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 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"name" : "translation", "value" : "GYIFTDYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VNPNSGAG" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAALVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 34, 33, 33, 32, 33, 33, 35, 31, 33, 32, 30, 29, 18, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYTFTDYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQIFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GVLAAFWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-23*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-23" }, { "name" : "Source-Sequence", "value" : "AF062263" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGAELARPGASVKMSCKASAYTFTDYTVHWVKQRPGQGLEWIGYINPSSGYTNYNQIFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARRGSFRATSYAMDYWGQGNSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.770 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12418:2719 (reversed)", "sequence" : "AACAGAAGTGAAGGTTGAGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAACCTCTGGATTCACTTTCAGTAAATATGGCATGTCTTGGGTTCGCCAGACTCCAGACGAGAGGCTGGAGTGGGTTGCAAACATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAACGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACAATATGGTAACTTCGGAGTTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCATTGTAGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 33, 37, 37, 37, 37, 37, 37, 19, 37, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 34, 17, 36, 36, 37, 35, 38, 35, 38, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 36, 39, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 36, 18, 37, 33, 38, 39, 39, 39, 39, 37, 34, 39, 33, 33, 37, 16, 37, 38, 39, 39, 39, 35, 38, 39, 39, 39, 39, 37, 39, 39, 38, 39, 37, 33, 38, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 18, 31, 19, 33, 37, 38, 39, 36, 38, 37, 30, 14, 36, 36, 36, 38, 32, 38, 39, 39, 18, 37, 16, 30, 14, 29, 33, 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37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 32, 30, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGDLVKPGGSLKLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDERLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSKYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQYGNFGVMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : 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34, 38, 38, 37, 38, 34, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QVQLKQSGAELVRPGTSVKMSCKAA" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWVKQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGYGSSSYDTDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVRPGTSVKMSCKAAGYTFTNYWIGWVKQRPGHGLEWIGDIYPGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYCARGYGSSSYDTDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.772 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19910:2720 (reversed)", "sequence" : "CGCACAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTAGTTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACACAGCAACCTGACATCTGAGAACTCTGCGGTCTATTCCTGTTAAAGATACGCTACGGCTACGTACAGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTCCATCCCTTGCATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 37, 32, 37, 37, 37, 37, 16, 38, 38, 16, 38, 38, 38, 38, 38, 32, 15, 37, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 33, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : 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37, 19, 38, 37, 37, 37, 37, 37, 33, 33, 33, 32, 30, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNFKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTAEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% 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37, 33, 33, 33, 37, 37, 33, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGPGLVAPSQSLSISCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"CGTCCAGGTCCAACTCCAGCAGCCTAGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAGTCCTAGCAACGGTCGTTCTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCGGCCTGACATCTGAGGACTCTGCGGTCTGTTACTGTACAAGATCGGAGTTACGACGAGGGGGCTATGCTTTGGACTACTGGGGTCTGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCCTTGGTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 36, 38, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPRAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVCYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISPSNGRS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSELRRGGYALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.20%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGFRAAYLDYWGKGTSVSVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "GG" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AY392864" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPRAELVKPGASVKLSCKASGYSFTSYWMHWVKQRPGQGLEWIGEISPSNGRSNYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVCYCTRSELRRGGYALDYWGLGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.799 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17352:2736 (reversed)", "sequence" : "CCGCGAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCGATCCATTGACAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 38, 37, 38, 38, 39, 38, 39, 18, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 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37, 37, 37, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.800 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15617:2736 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{ "sequence" : { "name" : "ERR346596.883 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13241:2820 (reversed)", "sequence" : "AAGTGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGGGGCTATAGGTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTCTATCCCTTGAAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 36, 38, 38, 37, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 37, 20, 39, 38, 32, 37, 38, 39, 38, 39, 38, 38, 38, 37, 37, 38, 38, 36, 37, 36, 35, 39, 38, 38, 38, 37, 37, 38, 38, 38, 37, 38, 37, 32, 33, 37, 37, 37, 37, 33, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGYRYDGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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"EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRGYRYDGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.885 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14260:2822 (reversed)", "sequence" : "CGCTCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTAGCGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTACCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTAATGACACAGCCATATATTACTGTGCTAGAAACCACAGGGGCTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGCCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCCTTGCGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 39, 39, 33, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 35, 39, 39, 37, 39, 39, 39, 33, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 37, 36, 37, 39, 39, 39, 33, 39, 39, 38, 34, 37, 37, 37, 33, 38, 35, 37, 37, 38, 37, 37, 16, 36, 36, 36, 33, 38, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 36, 36, 32, 38, 39, 38, 38, 38, 38, 38, 38, 37, 33, 37, 34, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLAQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTASS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGWDYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GG" }, { "name" : "allele", "value" : "IGHD-ST4*01" }, { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLAQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGMIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCARNHRGYYFDYWGQGTTLTASS" } ] } ] }, { "sequence" : { "name" : "ERR346596.886 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11808:2824 (reversed)", "sequence" : "AGTTGAAGTGAAGCTGGTGGAGTCTGGGGGAGACTTAGTGAGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTGGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTTCAAGACTGAGCTATGATTACGACGGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 33, 37, 35, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 37, 38, 38, 32, 36, 36, 37, 38, 39, 35, 38, 39, 39, 33, 37, 39, 38, 38, 39, 38, 38, 38, 39, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 37, 37, 38, 39, 33, 38, 39, 39, 39, 39, 19, 38, 39, 39, 39, 37, 37, 38, 38, 39, 37, 33, 39, 39, 39, 39, 39, 38, 37, 39, 38, 36, 37, 38, 37, 37, 38, 39, 37, 38, 39, 39, 33, 14, 37, 38, 38, 33, 37, 39, 38, 39, 39, 38, 39, 36, 39, 39, 38, 39, 38, 38, 38, 31, 37, 30, 35, 37, 38, 38, 39, 33, 38, 39, 39, 37, 37, 38, 37, 39, 36, 38, 38, 39, 37, 37, 37, 15, 15, 27, 15, 14, 27, 38, 39, 39, 39, 37, 15, 25, 34, 33, 34, 36, 33, 32, 36, 39, 37, 36, 38, 15, 38, 37, 35, 32, 33, 31, 38, 35, 37, 33, 37, 37, 37, 34, 26, 34, 38, 37, 38, 38, 37, 34, 32, 34, 33, 37, 37, 15, 33, 33, 37, 38, 37, 37, 34, 37, 27, 33, 34, 35, 35, 36, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 38, 35, 16, 38, 27, 16, 27, 16, 16, 33, 37, 39, 35, 30, 30, 30, 16, 16, 37, 39, 38, 16, 35, 37, 30, 30, 15, 39, 36, 37, 29, 27, 35, 38, 37, 17, 17, 16, 31, 16, 37, 39, 38, 33, 38, 37, 37, 33, 15, 16, 36, 37, 37, 37, 17, 35, 33, 38, 38, 38, 39, 38, 36, 37, 38, 34, 34, 36, 29, 37, 14, 14, 32, 38, 39, 39, 38, 39, 39, 39, 38, 37, 39, 36, 36, 36, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 38, 36, 38, 37, 36, 16, 38, 37, 36, 32, 38, 39, 38, 38, 37, 32, 36, 34, 38, 38, 38, 37, 32, 32, 35, 35, 35, 32, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVRPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRLSYDYDGAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVRPGGSLKLSCAASGFTFSSYDMSWVRQTPDKRLEWVATIGSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCSRLSYDYDGAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.887 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19546:2824 (reversed)", "sequence" : "CCCAGAGGTCCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGGGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTACAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGAGGGTGGGACGGGTTTTGCTTCCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGCCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 19, 38, 39, 39, 32, 35, 33, 36, 19, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 36, 35, 37, 38, 36, 34, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 37, 39, 38, 39, 39, 33, 37, 38, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 34, 37, 37, 39, 39, 39, 39, 37, 35, 38, 39, 37, 39, 36, 39, 39, 39, 39, 39, 39, 37, 37, 37, 38, 38, 39, 39, 39, 39, 36, 39, 38, 37, 38, 34, 36, 36, 36, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 35, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 36, 34, 38, 38, 38, 35, 35, 37, 38, 37, 37, 39, 39, 39, 37, 39, 38, 38, 37, 38, 38, 37, 37, 38, 37, 39, 37, 37, 34, 34, 34, 38, 37, 38, 36, 37, 38, 38, 38, 39, 39, 34, 36, 37, 37, 37, 38, 39, 38, 36, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 37, 38, 37, 33, 37, 37, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 37, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 37, 37, 38, 35, 38, 38, 38, 38, 39, 39, 39, 39, 36, 39, 38, 33, 39, 38, 39, 39, 38, 39, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 36, 39, 37, 37, 38, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 36, 37, 37, 39, 37, 39, 38, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 37, 39, 37, 38, 38, 38, 38, 38, 38, 38, 37, 37, 33, 33, 33, 33, 35, 32, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLQMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGGTGFAS" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "PGLLP" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WFASWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLQMNSLQTDDTAMYYCAREGGTGFASWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.760 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18993:2712 (reversed)", "sequence" : "CGCTCAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCCCTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 36, 39, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 35, 39, 39, 38, 36, 36, 38, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 38, 35, 18, 39, 39, 39, 39, 33, 37, 37, 37, 37, 37, 39, 37, 38, 36, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 36, 39, 37, 39, 37, 39, 39, 38, 36, 36, 14, 38, 38, 18, 38, 36, 38, 38, 38, 38, 39, 39, 39, 36, 38, 39, 39, 39, 38, 39, 38, 38, 38, 37, 38, 37, 38, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 39, 37, 36, 39, 38, 38, 38, 38, 37, 37, 34, 38, 38, 34, 38, 39, 39, 36, 37, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 37, 37, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : 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"name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RDG" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { 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33, 32, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MRWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTVYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INLYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRVTT*LDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "LDYWGQGTSVNVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M24786" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTVYYMRWVKQSHVKSLEWIGRINLYNGATTYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYCARRVTT*LDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.844 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11224:2783 (reversed)", "sequence" : "ACACGACGTGATGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATGAGGTATTACAAAGTACTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCACCCTTGCTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 30, 30, 35, 35, 32, 32, 37, 38, 38, 38, 34, 38, 37, 33, 37, 32, 38, 39, 39, 38, 39, 38, 33, 37, 34, 30, 36, 38, 34, 39, 38, 36, 36, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 34, 38, 37, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 39, 39, 39, 39, 39, 15, 37, 37, 37, 16, 38, 16, 37, 38, 36, 38, 37, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 37, 38, 39, 37, 37, 37, 38, 39, 39, 34, 39, 39, 39, 34, 34, 37, 38, 38, 38, 38, 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37, 37, 34, 37, 15, 16, 38, 38, 38, 37, 36, 38, 36, 36, 32, 38, 34, 36, 37, 38, 38, 34, 36, 33, 38, 32, 32, 32, 34, 33, 33, 37, 37, 37, 33, 32, 31, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDEVLQSTYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDEVLQSTYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.845 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18284:2783 (reversed)", "sequence" : "GATTGACGTGATGTTGGTGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAAAGTATGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGTTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 32, 32, 33, 33, 37, 37, 38, 38, 38, 38, 36, 37, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 34, 37, 38, 37, 39, 39, 39, 38, 38, 37, 38, 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"value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.40%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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39, 39, 39, 38, 38, 38, 39, 39, 37, 37, 38, 39, 39, 39, 39, 38, 39, 36, 39, 39, 39, 38, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 38, 34, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGESLKFSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLE*VAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GITVSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGYVDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGESLKFSCAASGITVSSYTMSWVRQTPEKRLE*VASITGGGTTYYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYCARHYGYVDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.850 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38, 36, 36, 33, 38, 37, 37, 38, 39, 39, 37, 38, 39, 39, 39, 37, 37, 38, 37, 36, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 38, 37, 36, 33, 32, 33, 33, 33, 35, 33, 33, 33, 33, 33, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPELVKPGASVKISCTGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSAYYGSSYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPELVKPGASVKISCTGSGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFCARSAYYGSSYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.851 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12814:2791 (reversed)", "sequence" : "GTGGCAGGTGCAGCTGAAGGAGTCTGGACCTTAACTGGTGAAGCCTGGGGGTTCAGGGAAGATTTTCTGCAAGACTTCTGGGTAAATATTTACTGACTACACCATGCACTGGGGGGAGCAGAGCCATGGGAAGAGCCTTGAGTGGATTGGAGGTGTTAATCCTAACAGTGGTGCTGGTACCTACGACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTAACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCAATTTATAACTACTATTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCTTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 29, 34, 16, 34, 32, 32, 33, 38, 16, 37, 16, 33, 15, 15, 15, 33, 35, 18, 37, 16, 15, 33, 15, 33, 16, 16, 33, 37, 16, 38, 16, 33, 16, 16, 16, 16, 33, 16, 33, 37, 37, 36, 14, 14, 32, 15, 33, 35, 16, 33, 14, 32, 14, 15, 16, 37, 35, 16, 35, 33, 17, 16, 17, 33, 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"value" : "0" }, { "name" : "translation", "value" : "GFAFSDTW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYAESVKGRFTISRDDSISSVYLQMNSLRAEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRTKADDHAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"LDWVRQSPEKGLERVAE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDTW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYAESVKGRFTISRDDPISSVYLQMNSLRAEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRTKADDYAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TPHPFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP GKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVY YCTT" }, { "name" : "IMGT_allele", "value" : "IGHV3-15*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-15" }, { "name" : "Videntity", "value" : "100,00% (302/302 nt)" }, { "name" : "Source-Sequence", "value" : "M24236" }, { "name" : "Source-Mismatches", "value" : "74" }, { "name" : "Source-Identity", "value" : "75.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGGLVQPGGSMKLSCAASGFTFSDTWLDWVRQSPEKGLERVAEIRTKADDYATYYAESVKGRFTISRDDPISSVYLQMNSLRAEDTGIYYCTPHPFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.857 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9645:2796 (reversed)", "sequence" : "NCGAGACGTGATGCTGGTGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGACCTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTAATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAACTGAAGACACTGGCATTTATTACTGTACGAGAGTACTACGGAACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCTTGAAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 16, 32, 32, 30, 32, 32, 32, 32, 33, 38, 38, 38, 38, 37, 32, 37, 15, 37, 38, 38, 39, 39, 39, 39, 39, 37, 32, 15, 36, 30, 32, 38, 38, 36, 37, 39, 38, 37, 38, 16, 37, 38, 39, 39, 39, 33, 38, 34, 14, 38, 39, 38, 36, 37, 38, 38, 39, 33, 38, 39, 36, 39, 39, 39, 39, 39, 16, 37, 35, 37, 38, 39, 16, 38, 39, 39, 39, 38, 33, 38, 37, 39, 33, 38, 38, 39, 39, 39, 38, 39, 39, 36, 33, 33, 38, 39, 38, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 32, 36, 14, 36, 36, 36, 16, 33, 37, 39, 39, 33, 38, 33, 38, 37, 39, 39, 38, 38, 34, 38, 38, 39, 38, 39, 39, 39, 39, 38, 37, 38, 38, 38, 32, 39, 38, 39, 37, 37, 38, 39, 37, 38, 35, 39, 38, 38, 37, 35, 39, 38, 39, 39, 38, 37, 37, 37, 37, 39, 39, 39, 39, 39, 39, 38, 16, 37, 38, 37, 39, 37, 36, 37, 31, 35, 38, 39, 37, 33, 34, 27, 25, 38, 35, 37, 35, 37, 38, 37, 38, 36, 37, 36, 30, 30, 38, 37, 37, 37, 33, 33, 39, 38, 39, 38, 39, 39, 38, 38, 39, 37, 39, 38, 39, 39, 38, 37, 38, 39, 37, 39, 38, 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"DVMLVESGGGLVQPGGSMKLSCVAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQSPEKGLEWVAE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"name" : "translation", "value" : "TRVLRNFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP GKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVY YCTT" }, { "name" : "IMGT_allele", "value" : "IGHV3-15*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-15" }, { "name" : "Videntity", "value" : "100,00% (302/302 nt)" }, { "name" : "Source-Sequence", "value" : "M24236" }, { "name" : "Source-Mismatches", "value" : "68" }, { "name" : "Source-Identity", "value" : "77.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : 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"Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSMKLSCVASGFTFSNYWMTWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRTEDTGIYYCTRVLRNFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.858 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16569:2797 (reversed)", "sequence" : "ATGGGAGGTCCAACTGCAGCAGTCTGGAGCTGAGCTGGCGAGGCCCGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAGATCAGGTGATGGTTACCCCAGGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGAAAC", "circular" : false, "sequenceType" : "Nucleotide", 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"EVQLQQSGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRTGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : 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"GAGTGAGGTACAGCTTCAGGAGTCTAGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAGTCCTAGCAACGGTCGTTCTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCGGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGATCGGAGTTACGACGAGGGGGCTATGCTTTGGACTACTGGGGTCTGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 36, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 32, 17, 33, 33, 33, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESRAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"CGGGGAGGTGCACCTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACCTATGGCATGTCTTGGGTTCGCCAGAATCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGATGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGACCAGTCTGAAGTCTGAGGACACAGCCATGTATTATTGTACAAGACGGGGGAGGTACGACGAGAGGACTGATATGGACTACTGGGGTCACGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGTCCATCCCCTGGAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 18, 32, 33, 33, 33, 33, 33, 32, 37, 37, 37, 38, 38, 38, 37, 37, 38, 36, 36, 38, 39, 39, 39, 35, 37, 37, 36, 36, 17, 17, 17, 37, 37, 39, 32, 38, 35, 35, 36, 36, 35, 38, 38, 39, 39, 39, 39, 37, 36, 15, 36, 34, 36, 38, 38, 39, 38, 39, 39, 37, 39, 39, 20, 37, 18, 36, 38, 38, 37, 33, 37, 18, 37, 38, 39, 39, 33, 37, 39, 33, 38, 37, 39, 39, 18, 37, 39, 37, 19, 37, 33, 37, 38, 39, 37, 37, 36, 38, 38, 38, 32, 38, 35, 39, 39, 37, 39, 39, 39, 39, 39, 30, 37, 15, 36, 36, 33, 35, 14, 37, 17, 33, 37, 37, 37, 39, 39, 38, 39, 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39, 38, 37, 38, 38, 38, 38, 37, 16, 32, 38, 32, 32, 35, 32, 37, 37, 35, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQNPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVMGRFTISRDNAKNTLYLQMTSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGHGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGRYDERTDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAASGFTFSTYGMSWVRQNPDKRLEWVATINSGGSYTYYPDSVMGRFTISRDNAKNTLYLQMTSLKSEDTAMYYCTRRGRYDERTDMDYWGHGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.866 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15576:2800 (reversed)", "sequence" : 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"EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : 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"ERR346596.878 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20476:2814 (reversed)", "sequence" : "GGTGCAGGTCCAGCTTCAGCAGTCTGGAGCTGGACTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCCGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAGTGAGAACTTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCGGAAGACTCTGCGGTCTATTTCTGGGCAAGACACGAGTCGTATGGTAACTATTTGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCAAAAACAACAGCCCCATCAGTCCATCCACTGTTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 36, 39, 37, 35, 38, 39, 38, 39, 39, 32, 38, 36, 38, 37, 39, 37, 39, 39, 32, 32, 37, 37, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 36, 37, 37, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 33, 33, 38, 37, 39, 37, 38, 38, 38, 37, 38, 39, 18, 38, 38, 33, 37, 38, 39, 39, 19, 37, 19, 37, 33, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYSENFKDKATLTADKSSSTVYMELSRLTSEDSAVYFW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHESYGNYLYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "54" }, { "name" : "Source-Identity", "value" : "81.63%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, 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"sequence" : "GCGGCAGGTGCAGCTGAAGGAGTCTGGACCTGTGCTGGGGAAACCTGGCGCTTCCGTGAAGATATCCTGCCAGGCTTCTGGTTACTCATTCACTGGCTACAACATGAACTGGGGGAAGCAGCACAATGGGAAGAGCCTTTGGTGGATTGGAAATATTGATCCTTTCTATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGAGGGCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTTCATCCCTTGAATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 30, 35, 16, 33, 16, 16, 16, 16, 16, 33, 16, 33, 33, 16, 37, 15, 15, 33, 37, 35, 18, 15, 16, 15, 38, 37, 15, 35, 33, 16, 35, 16, 33, 15, 32, 14, 32, 14, 15, 33, 32, 15, 15, 15, 36, 14, 14, 33, 14, 16, 32, 32, 32, 14, 14, 33, 32, 35, 16, 17, 16, 35, 37, 16, 16, 15, 33, 16, 30, 14, 32, 33, 29, 16, 16, 16, 16, 33, 16, 37, 17, 16, 16, 33, 38, 17, 17, 16, 33, 33, 33, 14, 33, 16, 33, 35, 37, 37, 14, 33, 37, 38, 39, 36, 36, 33, 38, 37, 14, 14, 14, 30, 36, 38, 16, 33, 15, 33, 33, 33, 38, 37, 37, 38, 15, 15, 16, 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33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPVLGKPGASVKISCQAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MNWGKQHNGKSLWWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPFYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", 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"GTTAGAGGTGAAGCTTCAGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAGGAGAAGGCTATGGTTACGACGAAAGGGGTCATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCTATCCATTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 33, 33, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 37, 38, 37, 36, 37, 37, 37, 39, 38, 39, 38, 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGEGYGYDERGHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { 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39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.828 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20752:2765 (reversed)", "sequence" : "TTACGAGGTACAGCTTCAGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTTATCCCTTGTTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 33, 39, 37, 38, 37, 37, 38, 37, 38, 39, 39, 39, 37, 39, 38, 37, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 37, 39, 39, 39, 39, 37, 39, 39, 37, 37, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 39, 38, 39, 39, 39, 39, 36, 37, 39, 39, 39, 39, 39, 39, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 32, 33, 33, 37, 33, 37, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPDLVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.829 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18440:2765 (reversed)", "sequence" : "TGCGGAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACTACTACATGAAGTGGGTGAAGCAGAACCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAGTGGTGATTCTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTGGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCCAGGTACGGGATTTACTGGGGCCAAGGCACCACCCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCCTGTAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 33, 36, 34, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 38, 35, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 36, 38, 37, 37, 37, 39, 39, 37, 18, 33, 38, 39, 39, 36, 38, 39, 38, 39, 39, 39, 38, 37, 18, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 34, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 37, 37, 30, 37, 37, 35, 35, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 35, 34, 39, 39, 39, 37, 39, 39, 37, 39, 37, 39, 39, 35, 37, 36, 36, 38, 38, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 38, 39, 39, 38, 39, 38, 37, 37, 39, 38, 39, 33, 38, 38, 38, 38, 37, 37, 39, 38, 37, 39, 39, 38, 38, 38, 38, 38, 37, 35, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 38, 35, 39, 38, 38, 35, 34, 37, 38, 39, 39, 39, 39, 37, 37, 37, 39, 39, 39, 38, 35, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 37, 38, 38, 39, 37, 37, 37, 33, 37, 37, 36, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 38, 38, 35, 39, 39, 39, 38, 37, 36, 36, 37, 38, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 37, 38, 37, 38, 39, 38, 37, 38, 37, 38, 37, 38, 34, 38, 38, 32, 32, 33, 33, 37, 37, 37, 33, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQNHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNSGDS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRYGIY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "94.59%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTDYYMKWVKQNHGKSLEWIGDINPNSGDSFYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVYYCARSRYGIYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.830 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15487:2767 (reversed)", "sequence" : "CGCTGAGGTGCACCTGGTGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCGCTTTTAGTGACACCTGGCTGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCCTGAGTGGGTTGCTGAAATTAGAACCAAAGCTGATGATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCATAAGTAGTGTCTGCCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGTACCCCCCATCCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCTATCCACTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 34, 32, 37, 37, 38, 38, 38, 38, 38, 38, 37, 37, 38, 38, 39, 39, 39, 37, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 38, 38, 38, 39, 37, 39, 37, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 34, 36, 38, 38, 39, 39, 39, 35, 38, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSDTW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYAESVKGRFTISRDDSISSVCLQMNSLRAEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRTKADDHAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGAELVKPGASVKLSCRASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCAIGLLGDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.833 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34, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 34, 34, 37, 37, 33, 37, 37, 37, 37, 37, 33, 32, 30, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQSPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTLSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPSYYGHTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" 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"sequence" : "GATGGAGGTCCAGCTGCAACAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGCTTGTAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGGCACATCCAAGAGCCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACGGCCACATATTACTGTGCAAGAAGGGGGGCTACCCACTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCCCCTCAGCCAAAACGACACCCCCATCAGCTTATCCATTGGGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 33, 29, 33, 18, 37, 38, 39, 37, 39, 39, 39, 39, 38, 38, 38, 37, 39, 39, 39, 36, 38, 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38, 36, 33, 33, 37, 33, 32, 33, 16, 18, 33, 16, 37, 37, 37, 37, 37, 32, 30, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSACS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRGTSKSQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGAGTTVTVPS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGATHYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGWDYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GG" }, { "name" : "allele", "value" : "IGHD-ST4*01" }, { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPSQSLSLTCTVTGYSITSACSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRGTSKSQFFLQLNSVTTEDTATYYCARRGATHYWYFDVWGAGTTVTVPS" } ] } ] }, { "sequence" : { "name" : "ERR346596.835 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13478:2771 (reversed)", "sequence" : "CGAGGAGGTGAAGCTGATGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAGACAACACCCCCATCAGTCTATCCCCTGTAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 34, 34, 34, 34, 34, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 37, 38, 34, 37, 38, 39, 39, 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36, 34, 38, 33, 32, 33, 33, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VSDGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVKPGGSLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATVSDGGNYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.836 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17062:2771 (reversed)", "sequence" : "TAGTGAGGTCCAACTGCAACAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGGTATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCCACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGTAGTACCTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 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37, 33, 33, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAHMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSTWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAHMELSSLTSEDSAVYYCARGSTWAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.837 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14624:2776 (reversed)", "sequence" : "GGGAGAGGTCCAGCTGCAACAGTCTGGACTTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACAACTACATGAAGTGGGTGAAACAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCACCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGAGAAATACGGCCCGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTTATCCATTGTACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 38, 39, 38, 39, 39, 37, 39, 39, 39, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 37, 38, 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"YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { 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"V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTASA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSYGFAY" } ] }, { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTASA" } ] } ] }, { "sequence" : { "name" : "ERR346596.962 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10216:2912 (reversed)", "sequence" : "CGTCGATGTGCAACTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACGAGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGATGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGACCAGTCTGAAGTCTGAGGACACAGCCATGTATTATTGTACAAGACGGGGGAGGTACGACGAGAGGACTGATATGGACTACTGGGGTCACGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCATTGAGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 32, 38, 38, 38, 38, 38, 38, 38, 19, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGPEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.974 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15268:2920 (reversed)", "sequence" : "AGGGGAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCATTGTGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 34, 34, 32, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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32, 39, 39, 39, 39, 39, 38, 36, 36, 36, 38, 37, 37, 38, 37, 36, 36, 36, 38, 36, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VSDGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATVSDGGNYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.975 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12593:2922 (reversed)", "sequence" : "GCTAGAGGTGCACCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACGACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGAGGGCGATTACTACGGTAGTAGCTACTACTTGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTAGCCCCTGGCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 33, 37, 32, 37, 33, 16, 33, 38, 37, 38, 16, 38, 36, 32, 32, 16, 37, 38, 38, 39, 39, 38, 39, 39, 38, 39, 37, 38, 38, 37, 39, 39, 39, 38, 37, 36, 32, 36, 36, 38, 36, 34, 37, 39, 37, 37, 37, 36, 38, 39, 36, 39, 37, 37, 39, 39, 37, 39, 39, 39, 39, 39, 38, 16, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 36, 37, 37, 37, 38, 38, 17, 16, 33, 36, 39, 39, 39, 39, 16, 38, 38, 39, 38, 37, 38, 37, 38, 31, 38, 38, 39, 38, 36, 39, 38, 38, 38, 30, 14, 14, 36, 37, 36, 39, 39, 38, 37, 16, 37, 14, 27, 37, 37, 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16, 16, 16, 32, 32, 37, 37, 32, 16, 29, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDDSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGDYYGSSYY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.30%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDDSKSQVFLKMNSLQTDDTAMYYCAREGDYYGSSYYLGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.976 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17880:2922 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGGGGAGGTTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAAGACACGGGGGTAGTAGAGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCTTGAAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 32, 35, 37, 37, 37, 16, 37, 38, 38, 38, 38, 38, 33, 38, 15, 38, 38, 39, 38, 39, 39, 39, 38, 38, 15, 32, 37, 36, 39, 39, 38, 38, 35, 38, 34, 38, 38, 38, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 37, 37, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 33, 37, 38, 39, 39, 38, 35, 38, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 37, 37, 39, 37, 39, 39, 37, 38, 37, 38, 34, 36, 36, 36, 38, 38, 39, 39, 39, 39, 39, 33, 37, 15, 37, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TREGPTGTGGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", 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361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTREGPTGTGGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.981 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10436:2924 (reversed)", "sequence" : "GTACCAGGTTCAGCTTCAGCAATCTGCAGCTGAATTGGCAAGACCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTACCTACACGATGCACTGGGTAAAACAGAGGCCTGGTCAGGGTCTGGAATGGATTGGATACATTAATCCTGGCAGTAGTTATATTGAATACAATCAGAATTTCAAGGACAAGACCACATTGACTGCAGACAAATCCTCCAGCTCAGCCTACATACAACTGAGCAGCCTGACATCTGAGGACTCTGCGGTCTATGACTGTGCAAGAAAGGTGGATGGTAACTACGGACCCCTTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGTCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 16, 32, 32, 37, 37, 32, 37, 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"CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPGSSYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARKVDGNYGPLFAY" } ] }, { "name" : 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35, 17, 38, 39, 38, 33, 37, 37, 37, 38, 36, 36, 14, 36, 27, 14, 38, 38, 39, 38, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 19, 37, 39, 38, 38, 39, 37, 35, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 37, 39, 38, 39, 37, 37, 39, 38, 38, 39, 38, 38, 38, 36, 32, 36, 18, 37, 34, 37, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 37, 37, 38, 37, 37, 32, 33, 33, 33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YFSDSVKGRFTISRDNAKNNLNLQMSSLRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISGGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSFGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19190:2928 (reversed)", "sequence" : "CGATCCAGGTCCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTATTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCACTGTCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 38, 39, 35, 39, 39, 39, 39, 39, 39, 38, 39, 39, 34, 36, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 39, 36, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 6, "max" : 80, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 105, "max" : 155, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 81, "max" : 104, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" 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SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 377, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, 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{ "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSVLVRPGASVKLSCKASGYTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTNYNEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCANYYGSSSYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.718 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19926:2662 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGGGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTTATATGGGGTGGTGGAAGCACATACTATAATTCATCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAATCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACATACCCTACGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCCTGTGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 19, 37, 37, 37, 35, 38, 38, 38, 33, 37, 37, 37, 32, 32, 33, 37, 32, 33, 37, 36, 37, 38, 39, 39, 38, 37, 39, 37, 38, 39, 18, 37, 36, 32, 32, 17, 36, 36, 38, 39, 39, 39, 39, 38, 34, 33, 18, 37, 38, 39, 38, 37, 39, 39, 39, 37, 37, 32, 38, 38, 39, 18, 35, 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38, 36, 37, 36, 16, 36, 37, 36, 33, 39, 37, 36, 38, 37, 37, 38, 38, 38, 39, 37, 39, 38, 37, 32, 37, 30, 32, 32, 37, 16, 36, 33, 38, 38, 32, 37, 39, 39, 34, 38, 39, 39, 38, 37, 38, 36, 36, 36, 36, 36, 34, 36, 34, 34, 36, 32, 36, 38, 37, 34, 34, 34, 33, 32, 33, 33, 33, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSSLKSRLSISKDNSKSQVFLKMNNLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKHTLRYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.17%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGSTYYNSSLKSRLSISKDNSKSQVFLKMNNLQTDDTAMYYCAKHTLRYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.719 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20729:2662 (reversed)", "sequence" : "TTGGCAGGTTCAGCTGCAGCAGTCGGGACCTGGCCTGGTGAAACCTTCTCGGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAGCTACAGTGGTGACGCTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGGAACCGCTATGATTACCGCTACTGGTACCTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGTCCATCCCTTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 18, 37, 32, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 17, 17, 36, 37, 38, 38, 39, 37, 39, 38, 39, 37, 38, 37, 36, 38, 37, 39, 20, 32, 33, 18, 37, 37, 38, 33, 38, 38, 36, 38, 38, 38, 39, 39, 20, 33, 38, 38, 37, 36, 38, 16, 37, 37, 39, 37, 39, 34, 35, 38, 39, 39, 39, 38, 36, 39, 39, 39, 33, 18, 30, 31, 33, 38, 34, 38, 38, 34, 37, 39, 39, 39, 38, 38, 39, 39, 39, 36, 33, 38, 38, 39, 19, 37, 38, 33, 38, 18, 18, 37, 38, 18, 38, 18, 33, 30, 36, 31, 31, 30, 33, 37, 38, 18, 18, 33, 35, 34, 38, 39, 39, 17, 37, 38, 39, 32, 39, 39, 39, 39, 39, 38, 27, 37, 37, 38, 38, 34, 39, 39, 38, 37, 39, 39, 39, 39, 36, 38, 38, 35, 16, 38, 39, 37, 37, 37, 37, 24, 27, 24, 37, 35, 24, 32, 35, 37, 38, 36, 38, 38, 37, 35, 37, 37, 37, 38, 39, 33, 37, 37, 39, 34, 38, 37, 39, 37, 33, 33, 34, 35, 36, 34, 34, 24, 26, 34, 37, 38, 34, 34, 33, 35, 38, 37, 39, 38, 34, 38, 38, 34, 39, 36, 36, 39, 39, 38, 38, 37, 38, 37, 37, 38, 38, 38, 37, 37, 39, 39, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 37, 37, 35, 38, 39, 37, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 34, 30, 37, 34, 36, 38, 38, 38, 38, 39, 39, 37, 38, 37, 37, 36, 36, 39, 38, 38, 38, 39, 38, 39, 38, 37, 36, 30, 37, 38, 37, 39, 38, 32, 36, 38, 36, 30, 31, 36, 34, 36, 37, 36, 33, 36, 31, 39, 38, 36, 37, 36, 36, 35, 37, 32, 38, 32, 38, 36, 37, 32, 36, 33, 36, 37, 37, 38, 39, 38, 38, 32, 38, 39, 39, 37, 37, 39, 39, 38, 38, 38, 36, 38, 36, 34, 38, 36, 38, 37, 37, 38, 38, 37, 37, 32, 33, 33, 33, 37, 37, 32, 32, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSRSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNRYDYRYWYLDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF PGNKLEWMGYMSYSGSTRYNPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-2" }, { "name" : "Videntity", "value" : "96,93% (284/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19894; J03832" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.86%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSRSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYISYSGDASYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARNRYDYRYWYLDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.720 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19107:2663 (reversed)", "sequence" : "TGCGCAGGTCCAACTGCAGCAGCCTATCCATTGTGATAGATCGGATGAGCACACGTCTGAACTCTAGTCACAGTTCTGTATCTAGAATGTTGCTTCCTGCTTGATAAAATAGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTGATCCTAGAACTGGTTACACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAATACAGCCTACATGCAGCTGAGCAGCCTGACATCTGAGGACTCTGTTGTTTTTTTAATTGTACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTGCGCAGGTCCAACTGCAGCAGCCCATCCATTGTGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 32, 16, 29, 35, 35, 37, 37, 37, 37, 33, 38, 38, 38, 38, 38, 34, 38, 38, 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36, 39, 37, 36, 32, 38, 38, 38, 37, 37, 38, 37, 38, 37, 37, 37, 37, 38, 33, 32, 33, 37, 37, 37, 37, 32, 30, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVTLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYKFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQNFKGKATLTADRSSTTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" 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"TTCACAGGTCCAGCTGCAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATAACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGAGGTGGAAGCACAGACTACAATGCAGCTTTCATGTCCAGACTGAGCATCATCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATTACACTGCCATATACTACTGTGCCAAAGGGACTGGGAACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTCCATCCCCTGCCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 33, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 37, 38, 38, 39, 39, 19, 37, 38, 38, 38, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 37, 39, 32, 39, 39, 39, 36, 39, 39, 38, 37, 37, 39, 39, 39, 39, 38, 37, 39, 39, 37, 18, 37, 38, 39, 39, 38, 37, 39, 39, 38, 36, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 38, 39, 37, 39, 39, 39, 38, 39, 38, 38, 36, 36, 36, 36, 36, 37, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 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30, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKGTGNGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : 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36, 37, 38, 38, 39, 38, 37, 38, 38, 38, 38, 37, 37, 38, 37, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.926 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20800:2870 (reversed)", "sequence" : 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"intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKASGYTFTNYWINWIRQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.929 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20429:2879 (reversed)", "sequence" : "CTTTGAGGTGCAGGGGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACACTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGATTGAGGAGGTACTACGGGTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGTTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 33, 33, 37, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 34, 32, 36, 38, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 37, 37, 38, 38, 38, 39, 39, 39, 38, 38, 34, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 37, 38, 30, 37, 38, 39, 39, 39, 38, 34, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 37, 37, 27, 34, 38, 38, 38, 39, 38, 39, 37, 39, 38, 38, 39, 39, 39, 39, 37, 37, 36, 37, 37, 37, 33, 34, 37, 34, 37, 33, 33, 33, 37, 37, 33, 37, 37, 38, 37, 38, 38, 38, 37, 37, 33, 15, 33, 38, 37, 38, 37, 37, 25, 38, 33, 39, 37, 38, 38, 25, 26, 37, 37, 37, 38, 37, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 34, 37, 38, 33, 38, 38, 33, 37, 36, 38, 34, 36, 38, 37, 2, 33, 38, 37, 33, 37, 38, 33, 38, 33, 39, 39, 39, 39, 37, 38, 37, 36, 39, 39, 38, 35, 33, 39, 36, 37, 38, 36, 38, 39, 39, 37, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 36, 39, 36, 39, 36, 39, 39, 37, 39, 39, 39, 38, 27, 14, 39, 37, 39, 38, 39, 38, 38, 38, 38, 36, 16, 16, 17, 33, 39, 38, 16, 36, 39, 38, 39, 39, 39, 39, 38, 36, 38, 39, 38, 39, 36, 39, 38, 39, 39, 38, 36, 39, 37, 33, 16, 34, 35, 39, 37, 38, 37, 39, 37, 38, 36, 36, 37, 38, 38, 39, 38, 39, 39, 38, 39, 38, 38, 38, 37, 38, 39, 38, 38, 38, 38, 38, 39, 36, 38, 38, 38, 36, 38, 37, 37, 38, 38, 37, 32, 32, 32, 37, 16, 37, 32, 32, 32, 32, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLRRYYGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARLRRYYGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.930 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13335:2879 (reversed)", "sequence" : "GACTCAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGATCTACTATGATTACGACGGAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTTCATCCATTGCCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 37, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 38, 37, 37, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 37, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 37, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 37, 38, 39, 39, 39, 38, 39, 37, 38, 38, 39, 39, 37, 38, 39, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 36, 39, 37, 37, 38, 36, 37, 38, 38, 37, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGSTMITTEAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TEAPDIMDAWGQGASVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TE" }, { "name" : "IMGT_allele", "value" : "IGHD1-6*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-6" }, { "name" : "Source-Sequence", "value" : "FJ041115" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAREGSTMITTEAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.932 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11410:2880 (reversed)", "sequence" : "GGAAGAGGTGCAGCTTCAGGAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGACAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACCTCTGAGGACTCGGCTGTCTATTTCTGTGCAAGAAAGGGGATATCTACTGTGATTGCGACGGCGTACTACTTTGACTACTGGGGCCAAGGCTCCACTCTCACTGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCACTGGCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 33, 33, 33, 33, 37, 37, 31, 37, 33, 37, 37, 37, 38, 38, 38, 37, 20, 38, 37, 37, 34, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 37, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 38, 39, 37, 39, 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"Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 335, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"translation", "value" : "MAWVRQAPGKGPEWVAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVTGRFTISRVNAKNTLYLEMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISNLAYSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVRPGFSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.938 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20787:2887 (reversed)", "sequence" : "TGATCAGGTCCAGCTTCAGCAATCTGGGGCTGAGCTGGCAAGACCTGGGGCTACAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTATTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGCCAGGGGGACTATGGCTCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCATTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 16, 32, 16, 37, 37, 37, 37, 33, 35, 37, 37, 38, 38, 37, 16, 16, 37, 32, 37, 37, 39, 39, 37, 37, 39, 38, 38, 34, 34, 36, 15, 15, 32, 37, 37, 39, 15, 15, 37, 15, 15, 33, 37, 38, 39, 37, 32, 32, 14, 32, 15, 37, 37, 16, 37, 39, 33, 37, 16, 32, 37, 16, 37, 38, 39, 39, 39, 33, 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39, 39, 38, 36, 39, 35, 38, 39, 37, 36, 38, 36, 36, 37, 37, 36, 36, 33, 38, 38, 36, 38, 39, 38, 36, 16, 39, 38, 39, 38, 39, 36, 38, 38, 36, 38, 38, 39, 36, 36, 36, 32, 36, 38, 34, 36, 37, 34, 33, 32, 33, 33, 33, 37, 37, 29, 18, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TKPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : 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34, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGASVKLSCTTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIAR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGASVKLSCTTSGYIFTSYWIHWVKQRSGQGLEWIARIYPGTGTTFYNEKFKGKATLTADQSSSTAYLQLKSLRT*DSAFQFWAREYGNYNYALDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.888 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21379:2825 (reversed)", "sequence" : "ATGGGAGGTGATGCTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAATGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAAAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCATTTACTACGAAGGCCAACTTCTTTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCACTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 32, 32, 16, 35, 38, 38, 38, 38, 37, 32, 38, 16, 37, 15, 33, 38, 39, 38, 38, 37, 32, 36, 15, 32, 36, 32, 35, 37, 35, 37, 38, 39, 37, 38, 37, 37, 39, 37, 37, 39, 37, 38, 34, 36, 38, 39, 39, 36, 38, 38, 15, 38, 16, 16, 37, 38, 39, 39, 38, 39, 39, 37, 37, 16, 17, 33, 37, 14, 33, 38, 39, 39, 39, 35, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 37, 39, 38, 38, 37, 39, 39, 37, 39, 33, 38, 37, 39, 39, 39, 37, 17, 37, 37, 39, 37, 38, 38, 39, 30, 36, 38, 38, 36, 38, 32, 37, 37, 38, 16, 37, 16, 27, 33, 33, 27, 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37, 35, 37, 37, 37, 33, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDNVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AFTTKANFFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDNVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAFTTKANFFAYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.890 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14860:2825 (reversed)", "sequence" : "GGACGAGGTGAAGCTGGTGGAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGGCTACGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTCATCCCCTGAATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 30, 32, 32, 32, 35, 35, 35, 32, 32, 37, 16, 37, 38, 38, 38, 38, 15, 32, 36, 32, 37, 39, 39, 38, 39, 39, 16, 38, 33, 38, 39, 38, 37, 16, 37, 37, 39, 39, 38, 39, 39, 34, 39, 38, 30, 37, 38, 38, 38, 34, 34, 37, 38, 38, 35, 38, 39, 35, 17, 33, 38, 38, 37, 39, 38, 39, 39, 39, 16, 15, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 16, 37, 16, 38, 15, 33, 38, 38, 38, 37, 38, 37, 33, 38, 39, 37, 38, 33, 38, 37, 37, 37, 37, 17, 33, 16, 33, 38, 39, 39, 39, 33, 27, 16, 36, 38, 34, 38, 39, 27, 27, 16, 33, 37, 39, 38, 33, 38, 38, 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37, 38, 18, 33, 16, 33, 16, 32, 32, 35, 37, 37, 33, 37, 32, 32, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRLRAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRLRAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.891 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12342:2827 (reversed)", "sequence" : "CTCCGAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGAAACCTGCAAGGCTTCTGGTTACTTCATTTACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGACCACATGGAGCTCCTGACCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGAATTTCCTACCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCTTATCCACTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 33, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 33, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 18, 37, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 37, 37, 37, 39, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 33, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 39, 38, 39, 39, 38, 33, 38, 39, 38, 39, 39, 30, 36, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPELVKPGASMKISCKASGFSFTGYTMNWVKQSHGKNLEWIGLINPYTGETSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARDVGNYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.894 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10964:2828 (reversed)", "sequence" : "AGCAGAGGTGCAGCTTCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACTTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGTGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCTTGGTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 32, 33, 32, 34, 32, 33, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 35, 37, 33, 38, 39, 39, 37, 20, 37, 39, 38, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INWIKQRPGQGLVWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKTSGYTFTNYWINWIKQRPGQGLVWLGRIAPGSGSTYYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.897 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17495:2831 (reversed)", "sequence" : "AGATGACGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGACTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCAACTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACATGGCCATGTATTATTGTGTAAGAGGGGAACTGGGACGTCGATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 33, 33, 33, 33, 33, 38, 38, 38, 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[ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRFTISRDNPKNTLFLQMTSLRSEDMAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISSGSSTN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRGELGRRYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17754:2837 (reversed)", "sequence" : "AATCGAGGTGCAGCTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGGCATCTGAGGACACTGCCGTCTATTACTGTAATGCCCGTGGGGATTACGACTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 31, 33, 33, 33, 37, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"translation", "value" : "ARDEVLQSTYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.907 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13050:2848 (reversed)", "sequence" : "GGAGGAGGTGCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGGAGTCCCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 32, 33, 33, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 34, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 39, 38, 39, 38, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVKLMESGGGLLQPGGSLKLSCAASGFDFSRYWMTWVRQAPGKGLEWIGEINPDSRTKNYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWMTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.911 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16018:2850 (reversed)", "sequence" : "GCGCCAGGTGCAGCTGAAGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCACCTACTATATGTACTGAGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAACAATGGTGGTACTAACTTCAAAGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGACGCACCTGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCTATCCCTTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 36, 38, 37, 38, 37, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 37, 39, 37, 39, 37, 39, 39, 36, 17, 33, 18, 37, 38, 18, 39, 39, 38, 37, 37, 39, 38, 39, 38, 39, 38, 39, 38, 38, 36, 35, 38, 38, 38, 38, 34, 38, 38, 38, 38, 38, 37, 37, 30, 33, 37, 37, 37, 33, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MY*VKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTTYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRTWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGTSVKLSCKASGYTFTTYYMY*VKQRPGQGLEWIGEINPNNGGTNFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRGRTWDFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.912 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20969:2851 (reversed)", "sequence" : "AGCCGAGGTTCAGCTGCAGCAGTCTGGACCTGAGTTGGTGAAGCCTGGGACTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCGGAGGGTCGATATTACTTTGTTATGACCTACTGGGGTCCAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTTATCCCTTGGTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 18, 32, 35, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 19, 37, 39, 39, 37, 33, 20, 38, 39, 37, 34, 33, 38, 37, 39, 37, 37, 36, 36, 39, 39, 32, 18, 37, 32, 37, 34, 36, 39, 39, 39, 39, 39, 37, 37, 37, 38, 35, 39, 39, 39, 39, 37, 37, 37, 39, 39, 39, 38, 39, 37, 38, 34, 37, 39, 37, 35, 38, 39, 37, 37, 38, 39, 37, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 36, 36, 38, 39, 39, 37, 37, 39, 38, 39, 37, 18, 37, 37, 37, 37, 37, 37, 30, 33, 38, 39, 36, 38, 39, 39, 39, 37, 30, 35, 37, 39, 39, 39, 38, 38, 39, 39, 38, 12, 33, 37, 38, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 30, 37, 37, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 36, 38, 39, 38, 34, 34, 37, 39, 39, 39, 39, 35, 34, 38, 38, 38, 39, 39, 38, 39, 37, 37, 39, 39, 34, 38, 38, 39, 38, 38, 37, 38, 39, 39, 39, 37, 39, 37, 38, 39, 39, 38, 37, 37, 39, 34, 34, 34, 14, 14, 38, 38, 39, 36, 39, 36, 39, 39, 38, 37, 16, 39, 38, 37, 38, 33, 38, 39, 39, 39, 37, 38, 38, 16, 15, 37, 39, 33, 36, 35, 29, 33, 38, 35, 35, 38, 37, 35, 36, 16, 38, 33, 15, 14, 30, 38, 36, 36, 37, 15, 29, 14, 14, 14, 30, 17, 17, 35, 31, 31, 17, 16, 38, 34, 35, 33, 16, 37, 31, 31, 16, 16, 35, 16, 33, 16, 33, 36, 36, 32, 32, 15, 15, 15, 32, 16, 32, 33, 16, 33, 15, 37, 37, 33, 36, 37, 16, 14, 36, 14, 36, 14, 33, 32, 14, 16, 37, 32, 15, 37, 38, 33, 30, 39, 37, 15, 39, 37, 32, 32, 32, 38, 36, 34, 38, 39, 38, 38, 38, 37, 37, 33, 38, 38, 32, 33, 37, 32, 32, 32, 37, 37, 37, 32, 32, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGPGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSEGRYYFVMTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFAMVYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFAMVYWGPGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "AJ291693" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.57%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSEGRYYFVMTYWGPGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.913 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21784:2853 (reversed)", "sequence" : "ATACCAGGTCCAGCTGCAGCAATCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAGTGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCTTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 39, 39, 37, 39, 39, 39, 37, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 33, 38, 36, 38, 38, 38, 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37, 35, 30, 18, 38, 30, 15, 37, 19, 39, 38, 39, 37, 34, 33, 38, 34, 39, 37, 39, 37, 32, 36, 32, 38, 38, 37, 37, 36, 36, 37, 37, 39, 39, 39, 39, 36, 34, 30, 34, 38, 39, 37, 39, 36, 37, 34, 38, 38, 36, 38, 38, 38, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 36, 36, 38, 38, 38, 37, 37, 33, 33, 33, 33, 35, 33, 33, 32, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKVNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.914 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19691:2853 (reversed)", "sequence" : "GGTGGAGGTGCAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGTTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGCCAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACACTGCAGTCTATTACTGTGCAAGAGTGTATTACTACGGTAGTAGCTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTTCAGCCAAAACAACAGCCCCATCAGTTTATCCCTTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 16, 29, 32, 32, 32, 16, 37, 37, 38, 38, 38, 37, 38, 38, 38, 35, 38, 38, 39, 39, 16, 37, 38, 37, 39, 39, 39, 33, 15, 32, 38, 38, 37, 39, 39, 39, 39, 38, 16, 33, 37, 38, 38, 36, 15, 32, 15, 37, 16, 38, 35, 37, 38, 39, 16, 37, 37, 37, 38, 33, 32, 39, 39, 39, 39, 38, 33, 37, 38, 38, 36, 38, 15, 32, 38, 39, 39, 32, 38, 38, 37, 38, 39, 33, 35, 38, 36, 39, 39, 38, 35, 38, 16, 37, 35, 16, 16, 33, 38, 14, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 30, 38, 37, 36, 16, 33, 37, 36, 32, 34, 38, 33, 35, 38, 38, 33, 37, 38, 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37, 18, 37, 16, 16, 33, 37, 32, 32, 32, 30, 34, 32, 32, 16, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRYGNYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : 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}, { "sequence" : { "name" : "ERR346596.918 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17874:2858 (reversed)", "sequence" : "AGTCCAGGTCCAACTGCAGCAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTTAGTAGCTACTGGATAGAGTGGGTAAATCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTACTACTCACTACAATGAGAAGTTCAAGGACAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTTTGCAAGAGGGGGATATGATACCTCCATTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGTCTATCCATTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 33, 37, 37, 37, 37, 37, 37, 37, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 37, 39, 39, 39, 38, 18, 37, 38, 37, 38, 39, 39, 39, 37, 39, 37, 37, 36, 37, 36, 36, 39, 37, 34, 39, 39, 39, 38, 37, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 18, 37, 39, 39, 39, 36, 39, 33, 38, 33, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 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38, 38, 37, 33, 32, 33, 18, 36, 38, 37, 35, 34, 38, 32, 34, 39, 39, 38, 39, 36, 32, 34, 36, 39, 38, 38, 38, 37, 38, 34, 38, 35, 38, 38, 37, 37, 37, 35, 19, 33, 33, 32, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVNQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "HYNEKFKDKATFTADTSSNTAYMQLSSLTSEDSAVYYF" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "MSWVRQTPDKRLGLVGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFIFSSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "*LPDNVKGRFTISRDNAKNTLYLQMSSLTSEDSAMYHC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ICSGDGYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 334, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 333, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQRGGGYYGFFAD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 323, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTTYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRTWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also 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"EVQLQQSGAEHVKPGTSVRLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGGKHKNEKFKTKATLTVDTSSSTAYMQLTSLASEDSALYYCARDGNWPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1009 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10711:2948 (reversed)", "sequence" : "CAGTGAGGTGCAGCGGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTTCAAGAGATAAAAACTATGGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCATTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 30, 32, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 36, 36, 36, 37, 38, 39, 39, 39, 38, 39, 38, 37, 36, 36, 36, 36, 38, 39, 39, 38, 38, 39, 38, 39, 39, 38, 39, 39, 37, 39, 39, 37, 36, 37, 36, 36, 37, 38, 39, 39, 39, 35, 37, 38, 38, 38, 39, 37, 39, 37, 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39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 38, 39, 39, 38, 38, 38, 38, 36, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 36, 37, 39, 38, 39, 38, 38, 38, 38, 39, 38, 37, 36, 38, 32, 38, 39, 39, 36, 32, 39, 39, 39, 39, 39, 38, 38, 36, 36, 38, 38, 39, 38, 37, 38, 36, 36, 38, 37, 32, 38, 33, 37, 37, 37, 37, 37, 33, 37, 32, 32, 29, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCSRDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1011 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21786:2949 (reversed)", "sequence" : "TAATGAGGTGATGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGACTCTCATGTCCAGACTGACCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGATATTACTACGGCTTCCTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAGACAACACCCCCATCGGTTCATCCCCTGTTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 37, 37, 38, 38, 38, 38, 38, 37, 34, 39, 39, 35, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 37, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 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38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 20, 39, 38, 39, 39, 39, 39, 38, 39, 32, 37, 38, 39, 38, 38, 39, 39, 34, 37, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 36, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSTLMSRLTISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGFLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSTLMSRLTISKDNSKSQVFLKMNSLQTDDTAMYYCARYYYGFLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1013 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14055:2950 (reversed)", "sequence" : "CTGTCAGGTTCAGCTGCAGCAATCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTAACTACTGGCTAGGTTGGTTAAAGCAGAGGCCTGGACATGGACTTGAGTGGATTGGAGATATTTACCCTGGAGGTGTTTATTCTAACTGCAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCTCTGCCTACATGCAGCTCAGTAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCAACTTGGGGTCCGTACTACTTTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAGCAGCCCCATCTGCCCATCCCTTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 32, 31, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 34, 38, 38, 34, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 33, 37, 39, 38, 39, 39, 39, 34, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 37, 39, 39, 33, 32, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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16, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 34, 39, 39, 39, 39, 39, 39, 39, 38, 36, 32, 32, 18, 37, 36, 32, 36, 38, 37, 36, 32, 39, 38, 38, 35, 38, 39, 34, 37, 38, 37, 38, 39, 34, 38, 38, 37, 38, 38, 38, 38, 37, 32, 34, 19, 30, 33, 33, 33, 33, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LGWLKQRPGHGLEWIGD" } ] 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38, 39, 38, 37, 38, 37, 38, 38, 38, 38, 38, 38, 37, 32, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQ*SGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWI*Q" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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38, 38, 37, 38, 38, 33, 33, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGALVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTTYNEKFKGKAALTSDKSSSTAYMELSSLTSEDSAVYYCARGNYYDYDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1032 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15212:2962 (reversed)", "sequence" : "GACACAGGTCCAACTGCAGCAGCCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCAGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGGTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 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"GNNNNNNNNNNANNNNNANNNNNNNNNNNNANACNTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGAAGGATTGATCCTGCGGGTGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATAAAGTCTCCCTGCAGCTCAGCGGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCATGATGCCCCTTTTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCTTATCCACTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 29, 2, 2, 2, 2, 2, 32, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 15, 2, 32, 32, 2, 33, 33, 37, 37, 38, 39, 39, 39, 39, 39, 36, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 38, 15, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 35, 38, 38, 39, 38, 39, 37, 37, 39, 39, 39, 38, 39, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 14, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 33, 36, 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"sequence" : { "name" : "ERR346596.1038 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18612:2966 (reversed)", "sequence" : "CTTGCAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCCCTGATAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 19, 35, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 32, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 18, 37, 38, 32, 38, 39, 18, 37, 38, 39, 39, 39, 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34, 38, 39, 38, 37, 37, 37, 37, 38, 36, 36, 36, 36, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 33, 33, 33, 37, 37, 37, 37, 32, 32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1039 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9406:2967 (reversed)", "sequence" : "GTGAGAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTAGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGTTACTACATGCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAGTTGTTACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTTACTGTAGACACATCCTCCAGCACAGCCTACATGCAGTTCAACAGCCTGACATCTGAAGACTCTGCGGTCTATTACTGTGCAAGATCTTGCGGGGCTTATGGTTACGACGGGGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCACTGCTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 33, 33, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISCYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSCGAYGYDGGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 377, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKTGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGYISCYNGATSYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYCARSCGAYGYDGGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1040 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12783:2967 (reversed)", "sequence" : "ATGGCAGGTGCAGCTGAAGGGGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCTCTTGCACTGTCTCTGGGGTTTTATTAACCAACTATGGTATACACTGGGTTCGCCAGCCTCCAGGGAAGGGTCTGGAGTGGCTGGGAGTAATTTGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCACCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACCGTGCCTCAACTGGGGCGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGTCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 29, 37, 16, 16, 32, 32, 37, 33, 16, 37, 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: "CAGTCAGGTTCAGCTTCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCTTGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 37, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 35, 39, 38, 38, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 36, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 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33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1169 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13690:3100 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGCAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCCCAGTCAACGTCTTCTCAGCCAAAACGACACCCCCATCAGCCTATCCCCTGCTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 36, 37, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 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39, 37, 36, 36, 36, 38, 37, 39, 38, 38, 38, 37, 37, 38, 38, 38, 36, 38, 34, 37, 37, 37, 37, 37, 37, 32, 32, 18, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGISYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYCARQLYGNYAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1086 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21900:3018 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAGGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAAGGGACTACTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 30, 32, 32, 35, 33, 33, 37, 33, 37, 37, 38, 38, 38, 34, 38, 38, 38, 34, 38, 36, 39, 39, 39, 39, 39, 34, 37, 37, 39, 39, 39, 39, 37, 38, 37, 39, 39, 33, 38, 39, 39, 39, 39, 37, 37, 39, 38, 36, 37, 17, 38, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 20, 37, 16, 36, 38, 37, 36, 18, 33, 37, 36, 33, 38, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 35, 37, 36, 38, 39, 38, 39, 38, 35, 39, 39, 36, 38, 38, 39, 39, 39, 38, 36, 37, 39, 38, 38, 33, 37, 38, 38, 38, 38, 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33, 32, 32, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGRATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDYSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGTNYNEKFKGRATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDYSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1087 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15459:3019 (reversed)", "sequence" : 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39, 38, 38, 36, 36, 38, 38, 39, 38, 37, 38, 37, 38, 37, 37, 37, 38, 38, 37, 33, 33, 33, 32, 32, 33, 33, 31, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSDTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFPFYYGSSFYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKASGYSFTSYWINWIKQRPGQGLEWIGRIAPGSDTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARFPFYYGSSFYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1089 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"CGGTCAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTGCTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCCTTGGTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 33, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 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37, 33, 38, 37, 32, 33, 33, 37, 33, 33, 32, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDC" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YAMDCW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YAMDCWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "AB048523" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDCWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1095 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11673:3028 (reversed)", "sequence" : "GTATCAGGTCCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCTATCCCTTGTAGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 38, 38, 38, 37, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 36, 37, 36, 36, 38, 38, 39, 39, 39, 33, 38, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 37, 39, 38, 38, 39, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 38, 39, 39, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 36, 39, 36, 38, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 36, 38, 36, 36, 36, 36, 36, 33, 38, 38, 37, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1096 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21038:3031 (reversed)", "sequence" : "ACATCAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCTATCCATTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 38, 37, 39, 38, 37, 39, 39, 39, 39, 38, 37, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADRSSSTAYMQLSSLTSENSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, 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"max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGALVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADRSSSTAYMQLSSLTSENSAVYFCARSDDGFPYSFDSWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1108 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17911:3039 (reversed)", "sequence" : "CCGAGACGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACATCTATTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACGATGCCAAGAACAACCTGTATCTGCAAATGAGCAGTCTGAAGTCTGAGGACGCAGCCATGTATTACTGTACAAGAGATCGTGGGGTACAGGGTCATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTCATCCACTGCTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 33, 34, 34, 33, 34, 32, 33, 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"min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDDAKNNLYLQMSSLKSEDAAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRDRGVQGHAMDY" } ] }, { "name" : "V-REGION", "type" : 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"IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VQPYRSIDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "VQ" }, { "name" : "IMGT_allele", "value" : "IGHD6-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-13" }, { "name" : "Source-Sequence", "value" : "AF062245" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGGMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATISDGGGYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGGMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1111 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9448:3043 (reversed)", "sequence" : "TAGGGAGGTCCAGCTGCAACAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCCTCACTAACTACTGGATAGGTTGGGTAGCGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTAATTGTGGAGGTGGTTATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCATCCACTGTTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 35, 39, 39, 39, 19, 38, 39, 38, 38, 37, 39, 38, 39, 38, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERFGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : 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"CGCGGAGGTGAAGCTGATGGAGTCAGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTCTATCCCTTGTATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 20, 37, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 38, 16, 37, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 36, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 39, 39, 38, 38, 18, 33, 38, 38, 37, 38, 39, 39, 39, 39, 39, 36, 37, 38, 39, 39, 38, 39, 38, 36, 39, 37, 38, 38, 38, 38, 34, 36, 38, 38, 38, 39, 38, 39, 37, 38, 39, 38, 38, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LG" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD5-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-1" }, { "name" : "Source-Sequence", "value" : "EU106346" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKTSGYTFTSYWIQWVKQRPGQGLGWIGEIFPGTGTTYYNEKFKGKATLTIDTSSSTAYMQLSSLTSEDSAVYFCARRRGNWEAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1155 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16910:3089 (reversed)", "sequence" : "AAGACAGGTGCAGCTGAAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCTGAGGCCTGAACAGGGCTTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCCGGGCATGGACACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCCTTATTACTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTCACCCCTTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 29, 32, 37, 37, 32, 35, 16, 37, 37, 34, 38, 38, 16, 33, 38, 38, 34, 38, 34, 39, 39, 39, 39, 37, 39, 38, 38, 15, 36, 34, 15, 38, 38, 38, 37, 39, 38, 39, 33, 37, 38, 39, 37, 39, 39, 38, 38, 38, 36, 37, 39, 38, 39, 39, 38, 36, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 33, 38, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 39, 33, 37, 37, 37, 36, 31, 37, 35, 38, 29, 38, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 37, 39, 16, 37, 38, 39, 38, 38, 38, 39, 38, 33, 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38, 38, 37, 32, 16, 16, 29, 16, 31, 32, 37, 37, 37, 31, 32, 32, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKLRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFPGMDTITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "APYYYGSSQFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTASGFNIKDTYMHWVKLRPEQGLEWIGRIDPANGNTKYDPKFPGMDTITADTSSNTAYLQLSSLTSEDTAVYYCAPYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1156 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10326:3090 (reversed)", "sequence" : "GCGCGAGGTGAAGCTGATGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCAGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAAAAACTATGGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCTTGCACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 37, 38, 38, 39, 39, 39, 39, 39, 37, 39, 37, 30, 36, 36, 36, 39, 37, 37, 38, 39, 37, 39, 34, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 17, 38, 38, 39, 35, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 34, 38, 38, 38, 38, 38, 39, 39, 39, 36, 39, 39, 39, 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39, 38, 38, 37, 36, 38, 38, 39, 38, 38, 38, 37, 36, 37, 38, 38, 37, 32, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGQFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGQFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1157 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14688:3090 (reversed)", "sequence" : "CTTAGAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTCCGCCAGACCCCGGAGAAGAGGCTGGAGTGGGTCGCAGCCATTAGTACTGATGGTAGTTTCATCTACTAACCAGACACTGTAAAAGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTTCTGCAAATGAGCACTCTAAGCCAAAACAACACCCCCATCGGCCCATCCCTTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 32, 32, 37, 18, 37, 37, 37, 37, 18, 37, 16, 33, 32, 16, 16, 33, 36, 38, 38, 39, 39, 39, 39, 39, 39, 38, 30, 36, 37, 30, 30, 14, 33, 16, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 33, 39, 30, 32, 37, 39, 39, 36, 37, 37, 37, 36, 26, 15, 37, 36, 37, 39, 39, 39, 39, 16, 26, 37, 38, 39, 39, 32, 37, 38, 39, 39, 39, 37, 38, 39, 39, 25, 39, 23, 39, 38, 16, 37, 17, 33, 17, 35, 38, 38, 39, 17, 32, 38, 24, 37, 38, 39, 29, 37, 17, 33, 38, 39, 39, 38, 33, 38, 31, 39, 39, 38, 34, 39, 30, 27, 38, 37, 34, 23, 34, 30, 37, 39, 37, 39, 38, 38, 37, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 38, 36, 38, 39, 38, 39, 37, 39, 38, 39, 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVDFG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC 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"name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"value" : "MHWVKQRPEQGPEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGPEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1282 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10588:3205 (reversed)", "sequence" : "CTCGGAGGTGCAGCTGGTGGAGTCTGGAGCTGAACTGGTAAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTATGATATAAACTGGGTGAGGCAGAGGCCTGAACAGGGACTTGAGTGGATTGGATGGATTTTTCCTGGAGATAATAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTACAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGGCTGACATCTGAAGACTCTGCTGTCTATTTCTGTGCACATGATGGTTTACTACCGGGGATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTTTATCCCTTGTACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 37, 38, 36, 32, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 37, 38, 39, 39, 39, 39, 35, 37, 37, 39, 39, 39, 39, 37, 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16, 16, 16, 37, 32, 32, 37, 35, 16, 32, 32, 29, 30, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ELKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWLKQRPGHDLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"AY014883" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : 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39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"EVQVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYC" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYN" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INSGGSYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRKKYSAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAASGFTFSTYCIYWVRQTPEKRLEWVATINSGGSYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYNARSRKKYSAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1201 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15422:3134 (reversed)", "sequence" : "ACTCGATGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGAGTCCCTGAAATTCTCCTGTGCAGCCTCTGGAATCACTGTCAGTAGTTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTACTGGTGGTGGTACCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAGTGAGCAGTCTGAGGTCTGAGGACACGGCCATATATTACTGTGCAAGACACTACGGCTACGTTGATGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCATTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 33, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 36, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GITVSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGYVDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.89%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVKPGESLKFSCAASGITVSSYTMSWVRQTPEKRLEWVASITGGGTTYYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYCARHYGYVDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1202 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12174:3135 (reversed)", "sequence" : "GCCGCAGGTGCAGCTGAAGGAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCCTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTTATCCTGGAAATGGTGATACTAGCTACAACCAGAAGTTCAAGGACAAGGCCAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTTCGGTCTATTACTGTACAAGAAGAAGCGATTATGGAAAAAATGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCCGCCAAAACAACACCCCCATCAGCCCATCCCCTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 30, 32, 32, 33, 33, 33, 33, 37, 37, 37, 37, 33, 38, 38, 38, 38, 38, 38, 33, 37, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 33, 37, 39, 38, 37, 38, 30, 34, 38, 17, 37, 39, 39, 39, 38, 39, 38, 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38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVPS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1205 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14638:3138 (reversed)", "sequence" : "TGGTCAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCCTCAGTGAGGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGATGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGAAAAATTACTCCTTACAATGATGGTACTAAGTACAATGAGAAGATCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCGGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACAGAATTACTACGGTAGTAGCTACCATTTAGATTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTCATCCATTGCGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 37, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 19, 38, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 18, 37, 39, 37, 37, 35, 16, 18, 37, 38, 39, 39, 39, 39, 39, 38, 37, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 39, 39, 39, 37, 38, 39, 37, 39, 37, 39, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 38, 39, 38, 33, 38, 39, 37, 37, 39, 39, 37, 39, 39, 36, 38, 39, 39, 39, 39, 38, 36, 14, 30, 36, 38, 38, 35, 36, 37, 39, 39, 37, 38, 39, 37, 38, 30, 37, 39, 39, 38, 37, 39, 39, 39, 39, 24, 39, 37, 37, 39, 37, 34, 38, 38, 38, 37, 37, 37, 34, 37, 33, 38, 38, 39, 38, 39, 39, 39, 38, 39, 37, 39, 37, 16, 34, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 34, 37, 39, 37, 39, 37, 36, 37, 38, 36, 38, 37, 38, 38, 39, 15, 38, 26, 26, 34, 37, 39, 39, 39, 39, 39, 34, 38, 39, 39, 37, 37, 27, 36, 37, 38, 38, 33, 37, 35, 37, 30, 37, 37, 38, 38, 38, 39, 37, 38, 38, 37, 27, 36, 39, 37, 34, 34, 39, 39, 38, 39, 39, 38, 37, 17, 39, 39, 37, 38, 35, 39, 38, 38, 34, 31, 33, 14, 35, 30, 39, 35, 33, 19, 33, 38, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 38, 38, 39, 39, 38, 30, 37, 19, 39, 37, 38, 36, 37, 38, 39, 39, 38, 38, 39, 37, 37, 39, 37, 37, 39, 38, 38, 33, 35, 38, 38, 38, 38, 37, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 36, 34, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 36, 33, 38, 37, 37, 37, 37, 32, 30, 33, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQKPGQGLEWIGK" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKIKGKATLTSDKSSGTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQNYYGSSYHLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRMSCKASGYTFTSYVMHWMKQKPGQGLEWIGKITPYNDGTKYNEKIKGKATLTSDKSSGTAYMELSSLTSEDSAVYYCARQNYYGSSYHLDYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1207 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17724:3143 (reversed)", "sequence" : "TAATGAAGTGAAGCTTGAGGAGTCTGAGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGAAAGACAGGGATACCATAGGTACGACGGGAGGGGGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGTCTATCCACTGGGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 37, 34, 38, 34, 38, 38, 39, 39, 39, 39, 37, 39, 38, 37, 34, 38, 38, 38, 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38, 17, 36, 38, 37, 38, 37, 29, 29, 17, 37, 39, 39, 38, 34, 33, 38, 37, 16, 17, 29, 33, 37, 33, 39, 39, 39, 38, 38, 39, 38, 38, 38, 36, 38, 38, 38, 38, 34, 36, 38, 38, 37, 37, 39, 39, 39, 39, 38, 37, 16, 38, 36, 34, 38, 39, 38, 38, 33, 39, 39, 39, 38, 39, 36, 39, 37, 37, 16, 16, 37, 37, 17, 35, 37, 37, 33, 37, 32, 32, 16, 34, 32, 16, 33, 17, 37, 38, 34, 38, 32, 38, 33, 39, 39, 39, 38, 38, 34, 37, 39, 36, 36, 37, 30, 38, 38, 37, 32, 33, 18, 33, 16, 33, 37, 34, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESEGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ERQGYHRYDGRGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESEGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCERQGYHRYDGRGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1208 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22177:3144 (reversed)", "sequence" : "CGTCCAGGTCCAGCTTCAGCAATCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTTATTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTATCACTGTCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAATAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATTCGCTGGGACCCCCTATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCTTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 32, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 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"D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VQPYRSIDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "VQ" }, { "name" : "IMGT_allele", "value" : "IGHD6-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-13" }, { "name" : "Source-Sequence", "value" : "AF062245" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDIAKNNLYLQMSSLKSEDTAMYYCARDRGVQGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1212 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14313:3148 (reversed)", "sequence" : "ACGCCAGGTGCAGCTGAAGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGCGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGCTAACTGGGAAGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCCCCATCCATTGCGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 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"MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASAKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGLTGKDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "94.08%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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18, 39, 38, 39, 37, 37, 32, 37, 30, 30, 37, 37, 38, 30, 30, 36, 36, 29, 36, 36, 36, 36, 34, 37, 38, 37, 36, 39, 37, 34, 39, 35, 38, 37, 38, 37, 32, 36, 36, 36, 32, 33, 36, 33, 36, 37, 33, 38, 39, 38, 38, 37, 39, 39, 39, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 36, 32, 17, 36, 32, 37, 38, 38, 37, 37, 32, 30, 32, 32, 35, 33, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYNEMFKVKAPLPVDTSSSTAYIQLSSLSSEDSAVYFG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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"Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1217 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19255:3153 (reversed)", "sequence" : "TCCCGAGGTGCAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAAAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTAACTGGGACTGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCTATCCCCTGGCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 36, 38, 38, 38, 37, 32, 37, 36, 37, 38, 39, 39, 20, 35, 33, 37, 38, 39, 39, 34, 39, 39, 39, 39, 38, 39, 39, 39, 35, 39, 17, 32, 36, 36, 36, 39, 38, 39, 39, 39, 37, 34, 18, 38, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 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36, 16, 38, 33, 38, 36, 38, 38, 38, 38, 38, 38, 38, 36, 39, 39, 38, 39, 39, 39, 36, 29, 30, 14, 38, 38, 37, 39, 37, 36, 14, 38, 38, 38, 38, 37, 15, 34, 38, 39, 39, 38, 37, 39, 39, 39, 38, 38, 37, 39, 38, 36, 15, 38, 39, 36, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 32, 35, 32, 32, 30, 32, 32, 32, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVTGTDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVTGTDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1219 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11642:3155 (reversed)", "sequence" : "CTAAGAGGTGAAGCTGATGGAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGACTTCTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTCCAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTTCGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAAACGACACCCCCATCGGTCCATCCCTTGTCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 32, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 33, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 38, 38, 38, 39, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 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37, 35, 31, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 17, 36, 37, 38, 38, 33, 36, 33, 37, 35, 38, 38, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 36, 36, 38, 38, 39, 36, 36, 36, 36, 36, 38, 37, 38, 34, 38, 37, 32, 33, 33, 37, 37, 37, 32, 31, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELMKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NSNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARELGLRLAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELMKPGASVKISCKTSGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNSNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARELGLRLAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1220 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11126:3155 (reversed)", "sequence" : "TTGTGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTCGTTACACCCACTATTTAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGACATAAGGCTAACTGGGAGGGGTTTGTTTACTGGGGCCAAGGGACTCTGGTCACCGTCTCTGCAGCCAAAACGACACCCCCATCGGCCCATCCATTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 33, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 37, 38, 38, 37, 38, 39, 39, 39, 38, 38, 33, 35, 35, 34, 38, 38, 38, 39, 38, 39, 38, 38, 37, 39, 38, 37, 38, 39, 38, 38, 38, 35, 38, 38, 38, 39, 38, 39, 39, 33, 38, 37, 38, 39, 39, 39, 39, 15, 36, 38, 35, 38, 38, 38, 38, 37, 35, 37, 37, 33, 35, 37, 23, 38, 38, 38, 38, 38, 34, 37, 26, 37, 37, 38, 38, 38, 38, 38, 37, 37, 37, 38, 38, 38, 37, 38, 38, 39, 39, 39, 34, 33, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 36, 37, 33, 37, 34, 37, 39, 37, 38, 33, 38, 36, 37, 36, 34, 27, 34, 37, 35, 37, 38, 37, 15, 34, 27, 37, 37, 37, 39, 38, 37, 16, 28, 27, 34, 33, 38, 37, 16, 37, 27, 16, 27, 32, 38, 39, 37, 37, 39, 35, 37, 39, 38, 33, 14, 34, 39, 39, 39, 36, 39, 37, 35, 39, 39, 38, 37, 37, 33, 18, 33, 17, 37, 36, 39, 39, 38, 33, 18, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 38, 39, 37, 38, 33, 38, 38, 36, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 37, 39, 38, 32, 38, 36, 38, 37, 37, 37, 39, 39, 38, 37, 36, 38, 38, 36, 32, 16, 38, 38, 37, 37, 36, 39, 38, 37, 37, 37, 35, 39, 36, 36, 37, 36, 36, 38, 38, 38, 32, 34, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYLDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGRYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHKANWEGFVY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LG" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD5-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-1" }, { "name" : "Source-Sequence", "value" : "EU106346" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGRYTHYLDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARHKANWEGFVYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1221 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14947:3157 (reversed)", "sequence" : "TGATCAGGTGCAGCTGAAGGAGTCAAGGCTGGAATGTCTCATTTTGACAAATGGCTTTTGTTTACCCACGACTGTCAAACAGTCCACGACATGTGGCTAATCACCTAAAAATAACAGCACATATGTTTCCTCTGAGGCGTGTTCCTTGTTAACAAGCACGGTGGCCATAGAGTGCTGGGGGATGGGCTGAGGACAGTCTGTACTCCTCTGAGACAAACACAAGGACCCCTCCTCTTGCATCTGCAACCCCATGAGAGCTTTCAAAGGCACTGGTATCCATCTTCCTGCTTCCTGCATTCATCTGGTACCCAGCCCCATCGGCCTATCCACTGTGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 37, 33, 37, 39, 39, 33, 38, 33, 38, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 37, 37, 37, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 38, 37, 37, 37, 37, 38, 38, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 18, 36, 39, 36, 34, 37, 37, 36, 38, 39, 39, 39, 39, 39, 39, 37, 39, 37, 24, 39, 39, 39, 39, 39, 39, 39, 36, 37, 37, 35, 37, 34, 37, 37, 39, 39, 39, 39, 37, 38, 38, 38, 39, 39, 37, 38, 39, 37, 39, 39, 38, 39, 38, 37, 39, 38, 38, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 38, 38, 39, 38, 38, 37, 38, 38, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 38, 38, 37, 34, 37, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 36, 38, 38, 36, 36, 36, 39, 38, 37, 37, 37, 39, 39, 37, 38, 33, 38, 38, 39, 38, 38, 37, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 35, 38, 34, 38, 39, 37, 39, 37, 37, 38, 38, 32, 16, 38, 37, 38, 39, 39, 36, 39, 37, 36, 38, 37, 38, 33, 37, 39, 37, 39, 38, 35, 39, 39, 35, 35, 33, 39, 39, 38, 38, 38, 38, 38, 38, 39, 34, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 31, 37, 32, 30, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 65, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 117, "max" : 131, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 263, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "KGTGIHLPASC" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 132, "max" : 262, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.1222 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9124:3158 (reversed)", "sequence" : "GCAAGAGGTGCAGGTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCACTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 33, 37, 32, 37, 37, 38, 34, 33, 38, 37, 32, 37, 36, 37, 38, 39, 38, 39, 39, 39, 37, 38, 32, 36, 37, 38, 38, 39, 39, 38, 38, 35, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 20, 37, 38, 37, 39, 39, 39, 39, 37, 39, 36, 39, 37, 37, 38, 38, 39, 37, 39, 39, 37, 39, 36, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 38, 38, 38, 34, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 39, 38, 37, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 37, 38, 37, 37, 37, 33, 38, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 33, 38, 38, 39, 38, 38, 37, 38, 37, 37, 39, 37, 37, 39, 39, 39, 39, 33, 34, 38, 26, 38, 38, 39, 37, 37, 37, 38, 37, 31, 31, 34, 13, 34, 34, 38, 34, 33, 37, 39, 38, 37, 37, 34, 33, 39, 37, 37, 38, 39, 39, 37, 39, 38, 37, 38, 38, 38, 38, 37, 36, 37, 34, 38, 38, 37, 39, 25, 37, 37, 33, 37, 33, 16, 16, 38, 39, 38, 38, 39, 38, 37, 37, 38, 37, 39, 37, 38, 35, 16, 39, 39, 37, 38, 34, 30, 16, 35, 38, 27, 33, 39, 38, 38, 38, 34, 36, 39, 38, 37, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 37, 36, 32, 36, 38, 35, 39, 39, 37, 35, 16, 39, 38, 38, 33, 37, 39, 39, 38, 37, 33, 37, 39, 38, 38, 39, 39, 38, 37, 38, 37, 14, 36, 38, 36, 36, 36, 34, 38, 38, 36, 39, 39, 39, 37, 39, 39, 36, 34, 36, 38, 39, 37, 36, 39, 36, 36, 30, 37, 14, 14, 16, 38, 38, 34, 38, 39, 39, 36, 32, 39, 38, 39, 39, 38, 38, 38, 36, 36, 38, 38, 39, 38, 37, 38, 36, 38, 32, 37, 16, 38, 35, 37, 16, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGSSFYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLAFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDGSSFYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1223 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13987:3158 (reversed)", "sequence" : "GCCCGAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCACGACTTCTGGATACATCTTCACCAGCTACTGGATTCACTGGGTAAAACAGAGGTCTGGACAGGGCCTTGAGTGGATTGCAAGGATTTATCCTGGAACTGGTACTACTTTCTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACCAATCCTCCCGCACTGCCTACCTGCAGCTCAGCAGCCTGAAATCTGAGGACTCTGCTGTCTATTTCTGTGCTAGGGAGTATGGTAACTACAACTATGCTTTGGACTACTGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLLESGPGLVAPSQTLSITCTVSGFSLPSYGVHWVRQSPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARYYYGFLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1179 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"qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLASEDSAVDYCARYRYD*YFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1182 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19663:3114 (reversed)", "sequence" : "TGGAGAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCACTGGTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 16, 32, 30, 37, 37, 37, 35, 38, 38, 38, 38, 38, 33, 38, 38, 32, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 37, 31, 37, 38, 38, 38, 39, 39, 38, 36, 39, 33, 38, 39, 39, 37, 39, 38, 39, 38, 38, 39, 39, 37, 38, 38, 39, 37, 36, 39, 38, 14, 38, 38, 39, 39, 39, 39, 36, 37, 38, 38, 38, 38, 33, 27, 38, 39, 39, 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37, 38, 38, 37, 37, 37, 37, 37, 32, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "99.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1183 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13710:3116 (reversed)", "sequence" : "CCTCGAGGTAAAGCTTCAGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATCCACCATCTCCAGAGACAATGCCAAGAATACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAAATTACTACGGCTCCTGGCACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCCTTGCACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 35, 37, 37, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 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38, 38, 34, 37, 33, 33, 33, 37, 37, 37, 33, 32, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRSTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNYYGSWHFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRSTISRDNAKNTLYLQMSSLKSEDTAMYYCARNYYGSWHFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1185 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11142:3119 (reversed)", "sequence" : "AGTGGAAGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTGTGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGACTGAGGGATGGTTACTCCCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTCCATCCATTGGGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 29, 29, 29, 35, 37, 37, 37, 35, 35, 37, 38, 35, 38, 38, 16, 16, 37, 32, 37, 37, 39, 39, 39, 38, 39, 39, 38, 36, 38, 38, 32, 32, 34, 37, 36, 33, 38, 39, 39, 38, 39, 39, 39, 37, 39, 39, 36, 39, 34, 38, 38, 39, 37, 32, 38, 37, 39, 39, 33, 36, 38, 37, 38, 39, 39, 39, 39, 36, 38, 39, 37, 39, 39, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 37, 17, 17, 33, 37, 39, 37, 37, 33, 36, 35, 38, 39, 38, 39, 29, 33, 17, 37, 39, 39, 39, 36, 14, 38, 36, 31, 37, 38, 38, 39, 34, 38, 39, 39, 38, 38, 38, 30, 27, 38, 38, 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16, 36, 16, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSCA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLRDGYSPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSCAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARLRDGYSPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1186 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18099:3120 (reversed)", "sequence" : 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33, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLRNLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVFYDSTSAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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"TTGTCAGGTCCAGCTCCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGTACGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTCATCCACTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 34, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 37, 38, 39, 39, 39, 38, 30, 37, 38, 38, 37, 38, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 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37, 38, 37, 37, 39, 39, 39, 37, 39, 38, 39, 39, 38, 37, 30, 38, 36, 37, 39, 38, 38, 39, 37, 30, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 34, 39, 37, 37, 39, 37, 39, 35, 33, 37, 37, 38, 33, 35, 18, 36, 37, 37, 39, 38, 38, 33, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 39, 34, 38, 38, 38, 38, 38, 38, 34, 36, 36, 32, 32, 35, 33, 37, 37, 33, 33, 32, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKSKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGTSYNQKSKGKATLTVDTSSSTAFMELHSLTSEDSLVYYCARQLYGNYAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1196 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12545:3128 (reversed)", "sequence" : "GAATGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGGCAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 36, 37, 34, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 36, 36, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 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38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 37, 36, 34, 38, 38, 38, 37, 38, 39, 39, 37, 37, 39, 39, 36, 37, 36, 36, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 39, 37, 38, 39, 38, 36, 30, 39, 39, 39, 38, 39, 38, 37, 38, 39, 39, 38, 34, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 34, 38, 33, 33, 33, 33, 32, 31, 37, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPGSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPGSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1198 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13810:3132 (reversed)", "sequence" : "CTGCGAGGTCCAGCTGCAACAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTACGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTTCCTATTACTACGGTAGTAGCTCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCTCATCCCCTGCACG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 19, 33, 33, 33, 35, 33, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : 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} ] } ] }, { "sequence" : { "name" : "ERR346596.1199 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18534:3133 (reversed)", "sequence" : "AGGACAGGTTCAGCTGCAGCAATCCATCCCCATCTGTCTATACCTTGGGGGTGATCGGAAGAGCACACGTCTGAACTCTGGTCACAGTTCCGTTTCTCGTATGCCGTCTTGTGTTTGGCAGAAACATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTAAAATGGTGGTACTATCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACACGTCATCCAACACAGCCTACATGGAGCTCCTCAGTCCGACATCTGATTCCTCTGTTTTTTTTAATGATACGGCGACCACCGAGATTTACACTCTTTCCCTACACGACGCACGTCCGATCTAGGACAGGTTCAGCTGCAGCAATCCACCCCCATCTGTCTATCCCTTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 16, 16, 34, 32, 32, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 16, 37, 39, 15, 33, 35, 16, 33, 38, 15, 15, 32, 15, 16, 35, 17, 17, 35, 32, 17, 17, 16, 35, 16, 35, 38, 39, 34, 14, 14, 14, 32, 14, 17, 17, 32, 36, 36, 38, 38, 39, 32, 36, 16, 37, 15, 15, 29, 29, 30, 15, 37, 16, 31, 16, 33, 38, 16, 16, 33, 37, 16, 37, 38, 16, 31, 33, 37, 17, 33, 32, 16, 16, 33, 31, 17, 17, 14, 14, 30, 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37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"V-REGION", "type" : "gene", "intervals" : [ { "min" : 4, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 360, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKNQFFLQLSSVTTEDTATYYC" } ] }, { 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"EVQLQESGDDLVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTIDTSSSTAYIQHSSLSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1260 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17395:3188 (reversed)", "sequence" : "TTGTCAGGTCCAGCTGCAGCAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTTTATGAACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGATAATACTGAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAACAGACACATCCTCCAACACAGCCTACCTGCAGCTCAACAGCCTGACATCTGAGGACACTGCCGTCTACTACTGTGCTAGATGCTTAGTACGTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELAKPGASVKLSCTASGFNIKDTYMHWVKQRPEKGLDWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVNYRYGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1117 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17273:3047 (reversed)", "sequence" : "TAAGGAAGTGAAGCTTGAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTTTATCCATTGTATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 30, 35, 34, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 37, 30, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 19, 37, 39, 39, 37, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 36, 39, 38, 39, 39, 38, 38, 39, 39, 38, 36, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 33, 38, 39, 39, 39, 39, 38, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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36, 36, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 36, 32, 20, 35, 34, 37, 35, 35, 37, 37, 32, 32, 30, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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38, 34, 36, 37, 38, 38, 37, 38, 37, 30, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQGPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGVPMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TTGCGAGGTGCAACTGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTTATCCCCTGACGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 19, 37, 37, 37, 38, 38, 38, 37, 37, 37, 36, 37, 38, 39, 39, 37, 37, 39, 38, 38, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 38, 37, 39, 37, 39, 38, 37, 39, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 37, 39, 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32, 38, 38, 38, 37, 38, 38, 33, 32, 33, 37, 37, 33, 33, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"GTTGGAGGTCCAGCTGCAACAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACAAATTCACTGACTATGAGATGCACTGGGTGAAACAGACACCTGTGCATGGCCTGGAATGGATTGGATCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAACTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCACCACAGCCTACAAGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGAGAAGGGATCTACTTTGGTTACGACGTACCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTCTATCCACTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 18, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 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37, 36, 38, 38, 39, 37, 38, 38, 37, 38, 38, 35, 34, 38, 38, 34, 33, 37, 37, 37, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVTLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYKFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQNFKGKATLTADRSSTTAYKELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "91.38%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVTLSCKASGYKFTDYEMHWVKQTPVHGLEWIGSIDPETGGTAYNQNFKGKATLTADRSSTTAYKELRSLTSEDSAVYYCTREGIYFGYDVPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1321 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"GGATGAGGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATGAGGTATTACAAAGTACTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGTCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 32, 37, 37, 38, 37, 38, 38, 38, 36, 37, 34, 37, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 38, 38, 37, 38, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 37, 38, 38, 39, 38, 39, 39, 37, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 14, 37, 37, 38, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDEVLQSTYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : 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"translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDEVLQSTYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1325 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17020:3243 (reversed)", "sequence" : "TTAACAGGTCCAGCTCCAGCAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAATTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATTCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGGCAACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATGGCTGTCTACTATGGTAATGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGTTCATCCCCTGCGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 30, 32, 32, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 36, 37, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 33, 38, 39, 38, 38, 34, 36, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 19, 18, 33, 31, 38, 38, 19, 37, 37, 38, 18, 30, 16, 33, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 33, 39, 39, 39, 39, 39, 36, 38, 38, 39, 38, 39, 37, 37, 39, 38, 38, 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16, 31, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTGNLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AMAVYYGNDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTGNLQLSSLTSEDTAVYYCAMAVYYGNDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1326 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10458:3244 (reversed)", "sequence" : 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39, 37, 38, 38, 36, 38, 38, 37, 33, 39, 39, 39, 37, 33, 39, 34, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 34, 34, 37, 32, 33, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TSQLGRFNYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTSQLGRFNYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1332 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8524:3249 (reversed)", "sequence" : "NGCGCAGGTGCAGCTGAAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGGATTTACTACGGCTACAAAGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCTTGGTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 32, 32, 33, 33, 35, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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37, 37, 34, 36, 39, 39, 38, 39, 39, 37, 38, 39, 39, 38, 38, 36, 36, 38, 37, 39, 32, 36, 36, 17, 36, 38, 37, 38, 37, 34, 37, 33, 33, 33, 37, 33, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGIYYGYKDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARGIYYGYKDFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1333 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19412:3249 (reversed)", "sequence" : "ATGTGAGGTGAAGCTGATGGAGTCTGTGGCAGAGATTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGTTTCTGGCTTCAACATTAGAGACTCCTATATGAATTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAATGGATTGGAAGGATTGATCCTGCGACTGGTTATCTTAAATGTGACCCGAAGTTGCAGGACAAGGCCACTATAACAGTAGGCACATCCTCCAACACAGCCTATCTGCACCTCAGTAGCCTGACGTCTGAGGTCACTGCCGTCTATTACTGTGCACTGGACGTGGGGGAAACTACTAACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCAATCTGTCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 37, 37, 38, 38, 38, 38, 39, 37, 37, 37, 38, 39, 39, 34, 36, 35, 36, 39, 39, 39, 39, 38, 37, 37, 39, 20, 33, 37, 38, 37, 37, 38, 38, 38, 38, 38, 39, 38, 39, 39, 35, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 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36, 36, 36, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 37, 39, 37, 38, 38, 38, 38, 36, 39, 37, 38, 37, 38, 39, 39, 37, 32, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARAITDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1337 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22655:3254 (reversed)", "sequence" : "NCCACAGGTCCAACTACAGCAACCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAATTATAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCGGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTACGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCTATTCCTTGGTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 16, 16, 29, 16, 32, 37, 37, 37, 37, 37, 38, 38, 37, 38, 16, 16, 32, 38, 36, 34, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 16, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 33, 36, 35, 39, 35, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 16, 37, 38, 39, 39, 39, 39, 16, 37, 33, 38, 39, 39, 39, 33, 38, 38, 38, 37, 37, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 38, 37, 35, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 36, 37, 39, 39, 37, 39, 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37, 32, 16, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARELGLRLAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1338 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8888:3254 (reversed)", "sequence" : "NGGTCAGGTTCAGCTTCAGCAATCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCCCCAGTTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTTGGGTGGATTGGCGAGATATTTCCTTGATCTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCACAGCAGCCTGACCTCGGAGGACTCTGCTGTCTATTTCTGTGCAAGGGAGGGTAGTAGGCTACGAAGGTACTGCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCAAAAACAACACCCCCAGCTGCCCATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 32, 32, 16, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 35, 38, 38, 16, 33, 37, 38, 37, 38, 16, 32, 37, 38, 37, 39, 16, 32, 38, 37, 37, 38, 39, 37, 35, 35, 38, 38, 39, 37, 38, 36, 37, 34, 14, 14, 33, 33, 32, 37, 39, 37, 16, 17, 32, 37, 37, 37, 38, 36, 37, 38, 39, 37, 15, 36, 33, 15, 15, 33, 17, 35, 38, 39, 37, 39, 38, 16, 37, 37, 38, 37, 37, 38, 33, 15, 33, 15, 15, 29, 16, 33, 33, 17, 33, 38, 16, 15, 33, 37, 36, 33, 35, 38, 37, 15, 37, 36, 16, 29, 16, 17, 33, 14, 33, 15, 15, 14, 30, 37, 37, 37, 14, 15, 37, 16, 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: "translation", "value" : "ARGRLYYGYDASSYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "21" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 331, "max" : 382, "direction" : 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"GGAGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGAATTGGACTTATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGATACCCAATCCTCTCTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCCTTGATTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 33, 37, 32, 37, 37, 37, 37, 38, 38, 37, 37, 38, 37, 33, 38, 34, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 38, 38, 37, 39, 38, 39, 39, 37, 39, 39, 39, 38, 39, 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39, 38, 33, 38, 37, 37, 38, 38, 38, 37, 34, 37, 32, 33, 37, 37, 37, 37, 33, 32, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLE*IGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARIPNPLYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWSAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : "AF174030" }, { "name" : "Source-Mismatches", "value" : "70" }, { "name" : "Source-Identity", "value" : "76.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSPKLSCAASGFDFSGYWMNWVRQAPGKGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWSAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1350 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18391:3264 (reversed)", "sequence" : "CCGCGATGTGCACCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTATGCATTCACTAATTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATTTTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGCATCTCAACAGCCTGACATCTGAAGACTCTGCAGTCTATTACTGTGCAAGATCCTTTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCATTGTGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 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33, 33, 33, 32, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : 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: false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARARHYDF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : 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"TGGGGATGTGCAGCTTCAGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCGGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCCTTGCCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 35, 36, 36, 37, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 35, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 35, 38, 38, 39, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 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"DVHLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCAGSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1308 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20258:3228 (reversed)", "sequence" : "GGTAGAGGTGCAGGTGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGTTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATACCTCTACGGCTATACGGCTACGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 32, 33, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 37, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 39, 37, 38, 39, 37, 39, 38, 39, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 38, 34, 36, 37, 38, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYLYGYTATFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYLYGYTATFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1309 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12942:3229 (reversed)", "sequence" : "CGTTGAGGTGCAGCTTGTTGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCACTGAATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 34, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 39, 38, 39, 36, 37, 30, 38, 36, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 37, 37, 36, 38, 36, 32, 33, 38, 39, 39, 38, 39, 39, 38, 38, 38, 37, 37, 37, 36, 38, 38, 38, 36, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, 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"EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1319 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15210:3237 (reversed)", "sequence" : "GGTTGATGTGAAGCTTCAGGAGTCTGGAGCTGAGCTGGTGAGGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGACTTCTGGATACATCTTCACCAGCTACTGGATTCACTGGGTAAAACAGAGGTCTGGGCGGGGCCTTGAGTGGATTGCAAGGATTTATCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGAAATCTGAGGACTCTGCTGTCTATTTCTGTACAAGAGCCGATAACCCTTCTATGGGCTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 29, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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32, 38, 38, 39, 38, 39, 37, 37, 39, 39, 39, 36, 38, 37, 37, 37, 16, 16, 38, 37, 32, 39, 36, 36, 32, 37, 34, 14, 33, 38, 38, 36, 32, 16, 36, 32, 15, 39, 39, 38, 36, 39, 38, 36, 32, 15, 38, 38, 38, 38, 38, 37, 32, 38, 38, 36, 34, 34, 32, 37, 31, 35, 35, 32, 35, 32, 31, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVRPGTSVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHWVKQRSGRGLEWIAR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYIFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLKSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGTGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRADNPSMGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.38%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVRPGTSVKLSCKTSGYIFTSYWIHWVKQRSGRGLEWIARIYPGTGTTYYNEKFKGKATLTADKSSSTAYMQLSSLKSEDSAVYFCTRADNPSMGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1320 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20403:3238 (reversed)", "sequence" : "TATAGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCAACGTCTTCTCAGCCAAAACGACACCCCCATCTGTCCATCCCCTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 36, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 37, 37, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 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38, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTSVNVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGGYTYYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVNVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1401 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21528:3309 (reversed)", "sequence" : "GCCGGACGTGATGTTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCCGGATTCGATTTTAGTAGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAGTGGATTGGAGAAATTAATCCAGATAGCAGTACGATAAACTATACGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAACGCCAAAAATACGCTGTATCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGTCTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTCATCCACTGCAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 38, 38, 38, 38, 38, 37, 38, 38, 19, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 30, 38, 39, 37, 39, 39, 39, 39, 32, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 16, 36, 37, 37, 38, 38, 39, 38, 37, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 34, 38, 38, 35, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"ATATGAGGTGCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCTTATCCCCTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 17, 38, 39, 39, 39, 38, 39, 39, 39, 39, 20, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 37, 39, 38, 39, 37, 39, 38, 33, 38, 38, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 18, 37, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 38, 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37, 37, 37, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRTGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGDGYPRDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKLSCKASGYTFTDYYINWVKQRTGQGLEWIGEIYPGSGNTYYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARSGDGYPRDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1404 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17072:3315 (reversed)", "sequence" : "AACGCAGGTCCACGTGAAGCAGTCTGGGGCTGACCTTGTGAGGCCAGGGGCCTTAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAGAGACTACTATATGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTTATATTATATATGACCCGAAGTTCCAGGGCAAGGCCAGTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGGAAGACGATCTACTATGGTAACTACGGGTTTGCTTACTGGGGCCAGGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGGCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 32, 35, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 34, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 37, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 33, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 37, 38, 37, 39, 39, 39, 38, 36, 38, 39, 38, 37, 38, 39, 39, 39, 39, 38, 35, 37, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 36, 38, 39, 39, 38, 39, 39, 38, 37, 38, 37, 39, 25, 39, 37, 38, 33, 39, 37, 39, 38, 37, 37, 37, 39, 39, 39, 39, 36, 38, 38, 36, 34, 38, 38, 34, 38, 39, 39, 39, 39, 38, 39, 37, 35, 36, 37, 37, 36, 39, 34, 33, 37, 33, 26, 34, 15, 39, 39, 34, 37, 38, 39, 37, 37, 34, 37, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 27, 34, 38, 38, 37, 36, 35, 33, 37, 38, 37, 38, 37, 38, 37, 39, 37, 37, 37, 39, 36, 34, 38, 15, 33, 38, 39, 38, 30, 16, 37, 39, 38, 35, 16, 33, 37, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIRDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPENGYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARKTIYYGNYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.20%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGADLVRPGALVKLSCTASGFNIRDYYMHWVKQRPEQGLEWIGWIDPENGYIIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKTIYYGNYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1405 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15530:3315 (reversed)", "sequence" : "CTGGGAGGTAAAGCTTCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGTAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGAGGGCGATATGATTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCTATCCCCTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 37, 32, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 38, 38, 36, 38, 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20, 37, 39, 39, 39, 39, 37, 39, 36, 39, 39, 38, 37, 33, 39, 39, 36, 34, 38, 39, 37, 39, 37, 39, 39, 39, 37, 38, 18, 39, 38, 32, 34, 34, 32, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 38, 34, 37, 39, 38, 38, 38, 35, 38, 32, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 38, 38, 33, 33, 33, 33, 31, 37, 37, 33, 33, 33, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIVV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGRYDFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : 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"TATTGAGGTGCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAGGACGGGACTACGTAATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGTCTATCCATTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 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"[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "4" 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SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : 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"EVQLQQSGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNDGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1236 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11903:3168 (reversed)", "sequence" : "TTTAGAGGTGCAGCTTCAGGAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTATTGGCTACACATTCAGTAACTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTTGAGAGATTTTACCTGGAAGTGGTAGTACTCACTACATAGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGGGGCTATGATTACGCCTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCCTATCCATTGTCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 34, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 39, 39, 38, 38, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 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"CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYIEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSLGKSLEWIGAINPNNGGSTYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYCCVRGFYFGNYVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1238 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16703:3170 (reversed)", "sequence" : "CTTACAGGTTCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCAACTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACATGATACTACGGTAGTACTCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 36, 36, 37, 37, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 37, 38, 39, 39, 37, 38, 37, 39, 37, 39, 38, 34, 37, 37, 38, 38, 38, 39, 39, 39, 38, 38, 39, 37, 39, 37, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 38, 38, 38, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 33, 38, 33, 39, 39, 37, 39, 39, 39, 37, 36, 38, 39, 39, 39, 38, 39, 39, 37, 39, 37, 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"max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKHDTTVVLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.49%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : 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: "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1240 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20898:3173 (reversed)", "sequence" : "GGGACAGGTCCAGCTGCAGCAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGCGGTAGCACTAACTACAACCCATCTCTCAAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATCTACTATGATTACGACGGTTGACTACTGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTAAAACAACAGCCCCATCGGCCTATCCCTTGGTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 32, 35, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 35, 36, 37, 38, 39, 39, 39, 39, 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"FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKISCKASGYSFTGYHMYWVKQSHGKSLEWIGRVNPNNGDISYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARSTATGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1367 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17290:3282 (reversed)", "sequence" : "GCGGGAGGTTCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGGCCAACATCTGAGGCCACTGCCGTTTATTACGGTGCTGAATACCTCTACAGCTATGCGGCTTCGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCCTTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 16, 16, 16, 29, 35, 35, 32, 33, 37, 37, 38, 38, 38, 16, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSRPTSEATAVYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AEYLYSYAASFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" 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"GTAGCAGGTGCAGCTGAAGGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCACCTTCAATACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGGTTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGATGACACAGCCATGTATTACTGTGTGAGAGAGGATTACTACGGCCCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGGACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 32, 38, 36, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 39, 37, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPKGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVRQAPGKGLEWVAR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TTTAGAGGTGAAGCTGATGGAATCTGGAGCTGACCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACAGATTCAATAGTTATTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAATTTCAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCGTATACATCCTCCAACACAGCCTACATGCAAATCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGGCTCGGAATACGGAGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 20, 38, 33, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 19, 37, 37, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 38, 36, 38, 38, 39, 37, 39, 39, 38, 38, 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33, 37, 33, 32, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGADLMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYRFNSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFNEKFKGKATFTAYTSSNTAYMQISSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGADLMKPGASVKISCKATGYRFNSYWIEWVKQRPGHGLEWIGEILPGSGSTNFNEKFKGKATFTAYTSSNTAYMQISSLTSEDSAVYYCARLGIRSFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1370 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19098:3285 (reversed)", "sequence" : "CGGAGAGGTCCAGCTGCAACAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCACTGTCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 16, 16, 32, 32, 32, 37, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GHSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : 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"QVQLQQPGAELAKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLE*IGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTKPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1275 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21306:3201 (reversed)", "sequence" : "CACCCAGGTCCAACTGCAGCAGCCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTCCTATTTACACTGGGTGAAGCAGAGGCCTGAGCAGGGCCTGGACTGGATTGGAAGGATTGATCCTGCGAAAGGTAATACTAACTATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACAAAGCCTACCTTCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTTCTGTGCTAGAAACTACCCTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTTTATCCCCTGAGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 30, 32, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 38, 38, 37, 38, 38, 38, 37, 39, 39, 39, 38, 39, 39, 20, 35, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAAYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1278 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22031:3202 (reversed)", "sequence" : "TTCAGACGTTGAAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTTATCCCCTGACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 34, 33, 33, 34, 34, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 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39, 39, 39, 38, 33, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 39, 39, 38, 33, 37, 37, 37, 39, 36, 36, 38, 37, 36, 18, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 37, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 36, 36, 39, 38, 38, 38, 38, 39, 36, 33, 38, 39, 38, 38, 37, 38, 17, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 32, 32, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 6, "max" : 80, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TLKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 105, "max" : 155, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 81, "max" : 104, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 177, "max" : 290, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 156, "max" : 176, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 321, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 291, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 6, "max" : 296, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"AAGGGAGGTTCAGCTTCAGCAATCTATCCATGGGCTTAGATCGGAACGGTCTGAACTCCAGTCACAGTCAACAACTTCGTATGCCGCCTTCTGCTTGTAAAAAAAAGGGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAAGTATAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCTGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCGGAGGACTCTGCAGGCTATTACTGTGCAAGAGAGCTCGGGCTACGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTATCTGCAGCCAAAACAACACCCCCAGCAGCCCATCCACGGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 29, 16, 29, 32, 35, 32, 16, 37, 37, 38, 38, 38, 16, 38, 38, 35, 38, 38, 15, 38, 39, 16, 18, 18, 18, 15, 35, 37, 18, 15, 38, 39, 39, 15, 37, 16, 16, 17, 16, 33, 15, 32, 14, 14, 14, 32, 14, 33, 14, 33, 16, 35, 16, 35, 16, 16, 33, 37, 17, 16, 33, 16, 32, 16, 33, 16, 37, 37, 16, 16, 14, 14, 16, 16, 35, 30, 15, 15, 15, 15, 17, 33, 14, 14, 14, 33, 36, 38, 16, 37, 16, 16, 16, 16, 15, 33, 17, 17, 17, 16, 29, 14, 29, 14, 27, 14, 15, 27, 27, 34, 30, 37, 27, 33, 38, 33, 16, 33, 37, 38, 38, 38, 38, 33, 37, 39, 37, 37, 38, 38, 16, 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"Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 35, 35, 29, 33, 33, 16, 16, 16, 33, 16, 16, 33, 16, 33, 15, 32, 32, 37, 38, 33, 38, 38, 38, 38, 14, 12, 24, 12, 12, 26, 14, 14, 14, 26, 24, 14, 14, 14, 26, 24, 32, 37, 30, 12, 29, 30, 12, 12, 32, 12, 14, 14, 12, 33, 14, 24, 25, 14, 24, 14, 33, 24, 33, 14, 24, 14, 14, 24, 14, 32, 24, 12, 14, 14, 33, 14, 33, 37, 14, 24, 24, 14, 26, 37, 14, 14, 26, 26, 12, 12, 12, 26, 14, 26, 26, 14, 25, 26, 25, 37, 33, 14, 14, 37, 14, 33, 37, 12, 12, 12, 12, 12, 24, 14, 24, 24, 31, 12, 25, 37, 12, 31, 12, 26, 24, 36, 12, 14, 24, 32, 24, 32, 33, 33, 25, 37, 32, 26, 33, 31, 12, 17, 24, 2, 33, 24, 19, 37, 37, 37, 37, 37, 36, 37, 38, 25, 36, 37, 38, 38, 38, 37, 37, 33, 38, 35, 37, 26, 31, 26, 15, 37, 38, 38, 38, 38, 37, 33, 37, 38, 37, 33, 37, 33, 38, 37, 31, 15, 37, 39, 35, 38, 34, 37, 36, 36, 37, 38, 32, 15, 34, 38, 39, 37, 36, 37, 37, 39, 39, 39, 38, 33, 15, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 36, 39, 35, 37, 38, 39, 36, 39, 36, 35, 37, 37, 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"FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWGWPNPGKRLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFRDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYYGADY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKISCAASGFTFRDYFMYWGWPNPGKRLEWVANISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARDYYGADYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1452 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14986:3356 (reversed)", "sequence" : "ATAACAGGTCCACGTGAAGCAGTCTGGGCCTCAGCTGGTTAGGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGTCTTGAGTGGATTGGCATGATTGATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAATCTTTATGGTTACCTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCACTGCTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 35, 35, 32, 37, 37, 37, 37, 38, 34, 38, 38, 38, 34, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 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39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 36, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 32, 39, 38, 39, 37, 39, 37, 37, 39, 39, 38, 39, 37, 38, 39, 36, 33, 36, 38, 38, 38, 39, 39, 38, 37, 38, 38, 38, 37, 38, 34, 38, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 35, 38, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPQLVRPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPSDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ANLYGYLFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPQLVRPGASVKISCKASGYSFTSYWMHWVKQRPGQGLEWIGMIDPSDSETRLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCANLYGYLFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1453 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19507:3356 (reversed)", "sequence" : "GCGTGAGGTCCAGCTGCAACAGTCTGCAGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGTAAGGCTTCTGGCTACACCTTTACTAGGTACACGATTTTTTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGATATATTGACTATAATCAGAAATTGAAGGACAAGACCACATTGACTGCAGACAAATCTTCCAGCACTGCCTACATGGAACTGATCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAGGGGATTACCTCGGCTACGGAGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCACTGCACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 37, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 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"ERR346596.1457 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22523:3361 (reversed)", "sequence" : "GGTACAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTAGTAGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGCCGATGCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAATGAGCAGGCGGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGAGAGGTGGATGGTTGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTTACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCCTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 30, 29, 29, 32, 37, 37, 37, 37, 37, 37, 37, 34, 38, 38, 34, 16, 16, 32, 37, 38, 37, 39, 39, 39, 39, 39, 37, 36, 38, 34, 38, 36, 38, 39, 39, 37, 38, 39, 39, 17, 37, 39, 39, 39, 39, 36, 38, 39, 36, 32, 36, 36, 33, 36, 38, 38, 39, 39, 33, 37, 39, 39, 39, 39, 38, 37, 39, 37, 39, 33, 35, 39, 37, 37, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 39, 37, 38, 37, 39, 39, 37, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 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32, 39, 39, 38, 37, 39, 38, 39, 38, 34, 37, 37, 37, 38, 32, 33, 32, 32, 33, 38, 34, 32, 36, 32, 16, 35, 32, 32, 37, 32, 32, 16, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRCTISRDNARNILYLQMSRRRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREVDGWYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVASISSGGSTYYPDSVKGRCTISRDNARNILYLQMSRRRSEDTAMYYCAREVDGWYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1458 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38, 38, 37, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSYGNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTDYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYCGSYGNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1460 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10621:3365 (reversed)", "sequence" : "GTAAGAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGGCCTCTGGCTACAACTTCACCAGCTACTGGATAAACTGGGTGAAGCTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTAGTAATCACAAAAACGAGAAATTCAAGCCCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACCCAGCAGCCTGGCATCTGAGGACTCTGCTCTCTATTACTGTGCAAGAGATGGGAACTGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGCCTCTGCAGCCAAAACAACAGCCCCATCAGCTTATCCATTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 18, 35, 32, 37, 34, 16, 33, 38, 38, 38, 37, 37, 38, 38, 34, 37, 32, 39, 36, 38, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 37, 37, 38, 38, 39, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 36, 39, 39, 36, 37, 39, 39, 37, 38, 38, 36, 39, 38, 39, 37, 39, 39, 38, 39, 38, 39, 39, 38, 39, 37, 37, 39, 38, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 37, 38, 38, 39, 39, 37, 39, 37, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 39, 36, 38, 39, 37, 38, 38, 35, 37, 39, 39, 38, 38, 38, 39, 38, 38, 37, 2, 27, 34, 39, 37, 38, 38, 36, 39, 37, 39, 39, 37, 38, 37, 34, 39, 39, 39, 39, 23, 16, 16, 27, 27, 33, 39, 35, 35, 36, 38, 39, 39, 39, 39, 39, 38, 32, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 36, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 36, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 37, 38, 38, 38, 38, 37, 38, 37, 38, 35, 38, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 32, 36, 37, 39, 38, 34, 39, 38, 38, 39, 39, 36, 17, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 34, 34, 34, 34, 33, 33, 34 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYNFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HKNEKFKPKATLTVDTSSSTAYMQPSSLASEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTASA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RDG" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { "name" : "Source-Sequence", "value" : "AF052381" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGSNHKNEKFKPKATLTVDTSSSTAYMQPSSLASEDSALYYCARDGNWPFAYWGQGTLVTASA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1461 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20724:3366 (reversed)", "sequence" : "GGTAGATGTAAAGCTTCAGGAGTCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAATGGATTGTATATATTTATCCTCACAATGGTGGTAATGGCTACAACCAGAAGTTCAAGAACAAGGCCACATTGACTGTAGACAGTTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGAGGGGTACTACGGCTACGACTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCTGCCTATCCCTTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 33, 37, 39, 39, 32, 32, 33, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 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38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 37, 37, 33, 33, 37, 37, 37, 37, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIVY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKNKATLTVDSSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPHNGGN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRGTTATTYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 371, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIVYIYPHNGGNGYNQKFKNKATLTVDSSSSTAYMELRSLTSEDSAVYYCARSRGTTATTYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1462 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16166:3366 (reversed)", "sequence" : "CTGTCAGGTCCAGCTGCAGCAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTTAGTGAAGATATCCTGCAAGGCTTCTGGTTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAGATGGTAGTACTAAGTACAATGAGAAATTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACTTCTGAGAACTCTGCAGTCTATTTCTGTGCAAGAAATGGTAACTACCGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCCCTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 36, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 38, 37, 38, 37, 39, 37, 38, 38, 39, 37, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 36, 36, 34, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 38, 38, 37, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 38, 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"ERR346596.1464 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18609:3366 (reversed)", "sequence" : "GTTAGATGTGCAGCTTCAGGAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAACAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGGCTCTGCCGTCTATTACTGTGCAAGAGGGTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCCCTGGGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 18, 33, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 38, 39, 39, 20, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 18, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 20, 35, 33, 38, 33, 33, 39, 39, 37, 39, 39, 37, 37, 37, 37, 38, 33, 36, 18, 37, 39, 38, 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"TTGGGAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCACCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTATCCAGATATAGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATGATATGGGGTGGTGGAAGCACAGACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGCTCTACTATGGTAACACATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCCTTGATGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 16, 32, 35, 32, 32, 33, 37, 37, 36, 38, 38, 38, 38, 38, 38, 34, 37, 38, 34, 38, 39, 39, 39, 39, 32, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 34, 38, 37, 39, 38, 38, 39, 38, 38, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 33, 39, 37, 39, 37, 39, 38, 38, 17, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 36, 38, 38, 36, 36, 37, 39, 38, 39, 39, 39, 39, 36, 39, 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38, 38, 37, 38, 37, 38, 37, 37, 37, 36, 33, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLSRYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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"GAGCCAGGTCCAGCTGCAGCAGTCTGGACCTGAACTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTTTGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTATTAAATACAATGAGAACTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGGAAGACCGGCGACCTACTCTGGTAACTTCTACTGGTACTTCGGTGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCACTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 31, 37, 37, 33, 37, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 37, 38, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 37, 39, 39, 38, 39, 37, 38, 39, 39, 37, 39, 39, 20, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 37, 38, 37, 37, 39, 37, 37, 38, 39, 39, 39, 37, 37, 39, 37, 39, 38, 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38, 38, 36, 38, 38, 38, 37, 39, 37, 38, 38, 37, 38, 38, 33, 20, 33, 34, 37, 37, 37, 37, 37, 31, 33, 32, 31, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNENFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GRPATYSGNFYWYFGV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVLHWVKQKPGQGLEWIGYINPYNDGIKYNENFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCGRPATYSGNFYWYFGVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1360 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9430:3277 (reversed)", "sequence" : "TGGGGATGTGCACCTGGTGGAGTCTGGGGGTGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGCTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGAGGGGGACGGGGCTTACTGGGGTCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTCATCCCCTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 32, 33, 37, 37, 37, 37, 37, 36, 37, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 30, 36, 17, 32, 36, 17, 36, 38, 36, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 17, 38, 16, 32, 37, 39, 36, 16, 37, 38, 39, 37, 18, 33, 37, 18, 37, 38, 39, 39, 39, 38, 37, 37, 33, 38, 39, 32, 38, 39, 39, 39, 39, 18, 37, 37, 37, 31, 37, 38, 38, 39, 19, 33, 37, 38, 39, 37, 39, 39, 39, 39, 38, 30, 19, 33, 37, 39, 36, 37, 36, 38, 39, 39, 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38, 39, 38, 38, 38, 38, 38, 18, 16, 16, 16, 16, 31, 32, 35, 32, 37, 37, 37, 32, 16, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TCTGGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATAGTGGTATTTACATCTACTATCCAGACAGTGTGAGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGATCGTGGGGTACAGGGCTATGCTATGGACTATTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCTTGGGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 36, 36, 37, 38, 38, 39, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 35, 35, 39, 38, 39, 39, 39, 38, 38, 35, 38, 38, 39, 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38, 38, 38, 38, 38, 38, 38, 37, 32, 33, 33, 33, 33, 37, 33, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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39, 38, 38, 38, 38, 36, 38, 39, 36, 37, 36, 32, 36, 19, 38, 34, 38, 36, 32, 32, 33, 33, 33, 33, 33, 33, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { 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"TTCGGAGGTGAAGCTGGTGGAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTCAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCCGACCTCTGAGGACTCTGCTGTCTAATTCTGTGCAAGAAGGAGGGGTAACTGGGAGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTCATCCATTGGAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 35, 35, 32, 30, 33, 37, 38, 38, 38, 38, 16, 15, 33, 32, 37, 38, 39, 39, 39, 39, 37, 39, 34, 37, 39, 39, 35, 37, 38, 39, 37, 39, 39, 39, 36, 38, 39, 39, 39, 37, 39, 36, 32, 32, 32, 36, 36, 37, 39, 37, 39, 39, 16, 32, 16, 37, 38, 16, 35, 38, 38, 39, 39, 39, 37, 16, 16, 33, 37, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 16, 37, 15, 38, 37, 39, 34, 16, 33, 33, 33, 37, 16, 38, 39, 33, 38, 39, 39, 39, 38, 15, 15, 16, 37, 39, 39, 39, 38, 34, 37, 38, 38, 38, 38, 39, 39, 15, 37, 37, 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38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 32, 16, 32, 29, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVKQRPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRRGNWEAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMEFRSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGVPHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 311, "direction" : "Right", "truncatedMin" 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32, 17, 37, 37, 39, 39, 39, 34, 39, 35, 37, 38, 39, 39, 37, 39, 39, 39, 18, 18, 37, 38, 37, 35, 35, 39, 39, 36, 38, 39, 34, 36, 35, 36, 38, 37, 39, 39, 39, 38, 39, 39, 38, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 37, 38, 38, 33, 33, 35, 38, 35, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 33, 38, 39, 37, 39, 37, 39, 39, 39, 36, 37, 38, 38, 39, 38, 38, 38, 38, 39, 36, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 37, 37, 39, 38, 39, 39, 24, 39, 38, 36, 24, 37, 39, 38, 37, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 33, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 38, 38, 39, 39, 39, 36, 39, 33, 38, 39, 38, 39, 37, 38, 37, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 37, 38, 37, 39, 39, 26, 37, 38, 39, 38, 39, 38, 38, 38, 39, 37, 39, 39, 38, 38, 14, 34, 38, 38, 38, 38, 38, 36, 39, 38, 38, 30, 32, 37, 39, 39, 37, 39, 38, 39, 38, 33, 37, 39, 39, 37, 37, 27, 27, 38, 34, 16, 38, 38, 16, 35, 37, 37, 30, 30, 16, 38, 38, 38, 37, 14, 37, 38, 38, 38, 37, 36, 16, 33, 39, 36, 39, 35, 37, 39, 33, 37, 33, 38, 35, 35, 35, 37, 33, 33, 38, 37, 39, 39, 38, 37, 36, 39, 36, 36, 36, 29, 14, 36, 36, 37, 33, 18, 38, 39, 38, 37, 36, 37, 38, 38, 38, 38, 36, 39, 38, 31, 30, 36, 30, 31, 38, 39, 37, 38, 30, 34, 36, 34, 32, 37, 39, 39, 39, 36, 33, 37, 16, 36, 18, 16, 32, 39, 36, 38, 37, 15, 33, 37, 37, 33, 17, 30, 38, 36, 32, 36, 36, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 32, 32, 18, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSTYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKLKGRATFTADTSSNTAYMQLSGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGHGTTPTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYKVRRVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", 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"ACCGGAGGTCCAGCTGCAACAATCCATCCCCATCAGCCCATCCCTTGACTGAGATCGGAAGAGCACACGTCTGGACTCCAGTCACAGTTCCGGATGTCGTATGCTGTCTTCTGCTTGTAAAGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCTAGAGACAATCCCAAGAACTCCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACTCTCTTTCCCTACACGACGCTCTTCCGATCTACCGGAGGTCCAGCGGCAACAAACCATCCCCATCAGCCCATCCCTTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 35, 35, 35, 32, 33, 37, 37, 38, 38, 33, 38, 16, 15, 32, 16, 33, 15, 37, 38, 15, 16, 36, 16, 32, 15, 32, 32, 32, 38, 16, 16, 16, 33, 32, 32, 15, 15, 15, 33, 32, 37, 39, 33, 16, 35, 33, 16, 33, 37, 16, 38, 39, 38, 36, 38, 14, 15, 33, 37, 16, 38, 15, 15, 36, 39, 14, 15, 14, 15, 16, 33, 38, 39, 16, 31, 37, 31, 16, 16, 33, 38, 16, 38, 39, 17, 33, 29, 14, 14, 14, 14, 16, 17, 29, 30, 15, 15, 15, 17, 17, 33, 16, 16, 17, 33, 17, 17, 33, 16, 33, 29, 38, 15, 16, 33, 17, 17, 33, 16, 16, 27, 33, 16, 16, 38, 38, 33, 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"TTAAGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACCGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCACTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 34, 39, 36, 36, 36, 38, 38, 39, 38, 39, 39, 39, 39, 18, 33, 38, 38, 39, 39, 38, 38, 37, 39, 39, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYR" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYRARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1506 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22311:3403 (reversed)", "sequence" : "ATGGGAGGTGCAGCTGCAGCAGTCCATCCCCATCAGTTTATCCACTGTCACAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAATCCAGGAAACAAATTGGAATGGATGGGCTACATAAGCTACGACGGTAACAATAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCGCGACACATATATGAACCAGTTTTTCCTGACGTTGAATTCTGTGTCTACTGAGGTCCCAGCTTCTTTTTTTTGTGTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTATGGGAGGTGCAGCTGCAGCAGTCCATCCCCATCAGTTTATCCACTGTCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 32, 33, 33, 33, 33, 37, 38, 38, 38, 38, 36, 33, 37, 38, 38, 38, 39, 39, 19, 35, 38, 37, 39, 39, 36, 34, 38, 39, 33, 38, 37, 38, 39, 38, 35, 38, 38, 37, 38, 39, 39, 38, 37, 20, 37, 20, 33, 18, 38, 39, 39, 36, 36, 16, 32, 16, 38, 39, 39, 39, 17, 32, 36, 38, 36, 17, 37, 20, 33, 37, 38, 39, 31, 18, 33, 37, 38, 38, 39, 31, 38, 38, 20, 37, 38, 16, 31, 16, 30, 16, 33, 37, 39, 38, 16, 33, 38, 19, 31, 29, 36, 30, 38, 32, 19, 33, 19, 19, 33, 33, 38, 15, 18, 18, 33, 15, 14, 14, 14, 14, 15, 33, 33, 33, 31, 37, 27, 34, 34, 27, 15, 34, 15, 16, 16, 31, 37, 16, 35, 16, 16, 16, 16, 16, 30, 34, 14, 27, 37, 25, 25, 14, 27, 37, 16, 16, 27, 27, 25, 16, 11, 27, 29, 12, 27, 27, 32, 11, 27, 26, 23, 34, 35, 37, 38, 26, 34, 14, 32, 15, 26, 26, 26, 26, 25, 32, 35, 34, 37, 37, 37, 37, 36, 15, 32, 24, 26, 26, 24, 33, 24, 13, 24, 32, 33, 31, 15, 15, 22, 24, 15, 15, 25, 10, 12, 22, 24, 26, 26, 33, 14, 14, 26, 14, 25, 24, 24, 33, 33, 13, 24, 32, 34, 27, 24, 27, 24, 11, 33, 37, 33, 13, 11, 27, 14, 16, 16, 16, 27, 37, 38, 37, 27, 27, 27, 28, 16, 30, 27, 16, 30, 16, 30, 15, 14, 30, 15, 30, 15, 16, 31, 16, 15, 15, 14, 30, 14, 27, 14, 30, 33, 27, 14, 14, 16, 33, 16, 16, 29, 33, 17, 17, 39, 39, 36, 36, 36, 29, 14, 29, 16, 14, 14, 36, 14, 36, 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39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 33, 38, 38, 36, 36, 38, 38, 38, 37, 39, 38, 36, 16, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 37, 38, 32, 32, 36, 32, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSGYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYLDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASLTGRDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP 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"Source-Identity", "value" : "92.68%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "80.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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15, 33, 32, 16, 39, 38, 38, 34, 37, 34, 32, 36, 14, 37, 32, 32, 16, 37, 32, 15, 37, 16, 37, 36, 15, 37, 37, 36, 32, 15, 33, 32, 32, 15, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 16, 37, 37, 37, 37, 37, 37, 31, 37, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMDPGDVWGQGTTVTVSS" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062276" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", 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"AATGCAGGTTCAGCTTCAGCAGTCTGGGACAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCGTGCGAATGGTAATATTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCACAGCAGCCTTCTATCGGATGACACTGCCGTCAATTACTGCGCTAGATACCTCCACGGCTATACGGCTACGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTTTATCCCCTGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 16, 33, 35, 37, 37, 37, 16, 37, 37, 38, 38, 38, 36, 35, 38, 16, 16, 37, 38, 39, 39, 39, 39, 39, 15, 32, 37, 37, 15, 32, 32, 37, 33, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 32, 36, 32, 14, 33, 38, 33, 32, 37, 16, 38, 39, 37, 32, 37, 16, 38, 38, 39, 39, 39, 16, 15, 37, 38, 39, 39, 37, 39, 39, 39, 39, 39, 16, 37, 39, 39, 35, 16, 16, 31, 33, 33, 38, 33, 16, 31, 16, 33, 15, 37, 14, 33, 31, 33, 38, 38, 39, 35, 17, 31, 33, 38, 39, 39, 39, 14, 14, 16, 33, 37, 38, 38, 39, 36, 36, 38, 38, 36, 38, 39, 33, 38, 39, 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37, 33, 18, 32, 16, 16, 16, 32, 32, 35, 29, 16, 33, 37, 32, 32, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGTELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQHSSLLSDDTAVNYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDRANGNI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGAATFTAATSSNTAYMQLSSLPSEDSADYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ILPGSGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGR*TAVTVPA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGDHCL*SMGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVKLSCKASGYTFTGYWMHWVKQRPGQGLEWIGEILPGSGSNYYNEKFKGAATFTAATSSNTAYMQLSSLPSEDSADYYCARSGDHCL*SMGYWGR*TAVTVPA" } ] } ] }, { "sequence" : { "name" : 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33, 32, 33, 33, 33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"name" : "translation", "value" : "GYIFTDYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VNPNSGAG" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPYLVKPGASVKISCKTSGYIFTDYTMHWVKQSHGKSLEWIGGVNPNSGAGTYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSIYNYYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1423 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12375:3331 (reversed)", "sequence" : "GGACCAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACAAATTCACTGACTATGAGATGCACTGGGTGAAACAGACACCTGTGCATGGCCTGGAATGGATTGGATCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAACTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCACCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGAGAAGGGATCTACTTTGGTTACGACGTACCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTTTATCCCTTGTTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 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"VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { 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38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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38, 37, 36, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNENFKGKATLTADKASSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGHGNYGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17605:3340 (reversed)", "sequence" : "GGCAGAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGGATTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGGGAAACTGGGAGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 19, 36, 38, 38, 38, 38, 38, 38, 38, 37, 32, 39, 39, 39, 39, 39, 38, 38, 38, 36, 38, 38, 39, 38, 39, 39, 37, 39, 33, 33, 37, 37, 37, 38, 39, 39, 39, 36, 38, 38, 38, 38, 39, 38, 39, 38, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 37, 38, 38, 35, 38, 39, 38, 39, 37, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 35, 38, 33, 39, 39, 39, 39, 38, 37, 38, 38, 38, 39, 37, 36, 37, 38, 18, 30, 37, 36, 39, 39, 38, 37, 39, 37, 37, 37, 38, 38, 38, 39, 38, 38, 39, 38, 38, 37, 38, 16, 37, 38, 37, 38, 24, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 37, 39, 39, 38, 39, 34, 38, 39, 39, 38, 39, 24, 39, 39, 38, 38, 37, 39, 39, 37, 39, 39, 39, 39, 25, 39, 39, 39, 38, 38, 35, 33, 34, 38, 38, 36, 34, 39, 38, 35, 38, 23, 39, 38, 39, 34, 38, 38, 38, 38, 35, 37, 37, 39, 39, 36, 21, 29, 24, 34, 39, 37, 35, 38, 38, 39, 37, 37, 38, 37, 39, 39, 39, 39, 37, 38, 39, 38, 38, 37, 34, 35, 39, 37, 37, 32, 38, 33, 15, 16, 37, 39, 39, 39, 39, 38, 37, 37, 39, 38, 39, 39, 39, 38, 33, 38, 35, 38, 39, 38, 36, 36, 33, 36, 39, 38, 37, 37, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 39, 37, 38, 37, 39, 37, 38, 38, 37, 39, 36, 39, 36, 38, 39, 38, 37, 37, 37, 38, 39, 39, 39, 39, 38, 36, 36, 37, 36, 36, 32, 33, 16, 36, 37, 37, 37, 35, 38, 38, 36, 17, 39, 38, 39, 38, 39, 37, 38, 36, 38, 38, 37, 37, 37, 36, 37, 33, 38, 38, 38, 38, 34, 38, 34, 33, 37, 37, 37, 33, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPRIGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGNWEAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LG" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD5-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-1" }, { "name" : "Source-Sequence", "value" : "EU106346" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGYINPRIGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARGNWEAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1437 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21764:3340 (reversed)", "sequence" : "CGTGGATGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTAGTAGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAAAAGGGGGGCGTATGGTAACTTCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCCATCCCTTGGGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 32, 33, 32, 37, 37, 37, 37, 37, 37, 35, 38, 38, 38, 38, 32, 37, 34, 37, 37, 39, 39, 39, 39, 39, 39, 38, 30, 30, 36, 36, 34, 17, 38, 33, 32, 20, 38, 33, 37, 39, 38, 39, 39, 39, 36, 32, 36, 16, 32, 36, 37, 37, 16, 38, 39, 39, 39, 37, 18, 37, 38, 39, 39, 39, 39, 37, 39, 38, 36, 37, 37, 39, 36, 38, 39, 39, 39, 39, 33, 38, 39, 39, 37, 37, 31, 38, 39, 38, 36, 33, 31, 37, 37, 37, 39, 39, 39, 38, 37, 37, 18, 38, 39, 37, 38, 36, 38, 39, 38, 36, 36, 37, 37, 36, 38, 38, 36, 36, 37, 34, 39, 39, 37, 34, 39, 16, 34, 15, 16, 37, 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"TTAGGAGGTGCAGCTTCAGCAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCGCTTTTAGTGACACCTGGCTGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCCTGAGTGGGTTGCTGAAATTAGAACCAAAGCTGATGATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCATAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGTACCCCCCATCCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCATTGCAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 16, 36, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 36, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 38, 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"QVQLKESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSIRKDNSKSQVFLKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1527 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8861:3421 (reversed)", "sequence" : "TCTAGATGTGAAGCTTCAGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATACCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCTTGCACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 35, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 38, 37, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 31, 37, 38, 39, 38, 39, 37, 18, 38, 38, 39, 39, 39, 39, 38, 38, 37, 37, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 33, 38, 38, 39, 39, 37, 39, 39, 39, 38, 35, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 25, 37, 37, 39, 38, 37, 38, 37, 38, 37, 17, 37, 38, 37, 39, 37, 38, 38, 34, 35, 39, 37, 39, 39, 39, 38, 39, 38, 38, 37, 39, 38, 37, 39, 37, 38, 38, 39, 39, 38, 37, 37, 38, 39, 38, 37, 38, 37, 38, 38, 39, 39, 39, 38, 34, 28, 23, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 39, 39, 39, 38, 37, 34, 34, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 36, 37, 37, 37, 39, 38, 37, 37, 39, 38, 31, 26, 38, 38, 36, 39, 39, 39, 39, 36, 39, 37, 39, 39, 37, 37, 39, 37, 38, 39, 39, 39, 39, 39, 37, 34, 38, 38, 37, 38, 37, 27, 39, 39, 39, 37, 39, 39, 37, 36, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 37, 37, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 37, 37, 18, 37, 38, 38, 38, 37, 32, 38, 36, 35, 36, 34, 37, 38, 38, 39, 38, 39, 39, 37, 37, 39, 38, 39, 38, 38, 39, 36, 38, 39, 38, 38, 35, 37, 34, 36, 18, 37, 32, 37, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 37, 37, 36, 37, 34, 36, 36, 36, 32, 37, 37, 37, 37, 34, 37, 34, 32, 33, 33, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "DVKLQESGPDLVKPGASVKIPCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPDLVKPGASVKIPCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1528 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22870:3422 (reversed)", "sequence" : "GGGCGAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTAGTAGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAAAAGGGGGGCGTATGGTAACTTCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCCATCCCCTGTCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 33, 32, 33, 33, 33, 33, 33, 37, 37, 35, 36, 38, 38, 37, 19, 37, 17, 37, 34, 39, 39, 39, 39, 39, 34, 30, 17, 17, 32, 17, 36, 16, 38, 37, 39, 39, 34, 38, 38, 39, 39, 39, 39, 39, 39, 33, 39, 38, 34, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 18, 36, 37, 19, 38, 38, 16, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 37, 19, 38, 39, 39, 39, 33, 18, 37, 38, 39, 19, 37, 36, 38, 39, 39, 39, 38, 36, 38, 34, 30, 37, 38, 38, 39, 38, 39, 39, 39, 33, 38, 36, 38, 38, 39, 39, 36, 39, 36, 38, 39, 37, 38, 39, 39, 37, 39, 38, 38, 38, 15, 34, 34, 38, 38, 38, 36, 39, 38, 39, 38, 37, 39, 39, 38, 39, 39, 37, 37, 37, 37, 37, 33, 38, 33, 24, 33, 25, 24, 34, 33, 34, 39, 38, 15, 38, 38, 37, 37, 37, 34, 25, 34, 33, 37, 26, 37, 30, 35, 35, 34, 36, 37, 33, 31, 37, 38, 38, 36, 38, 38, 38, 39, 39, 34, 37, 39, 37, 38, 34, 36, 37, 37, 38, 33, 37, 14, 38, 37, 33, 37, 37, 38, 27, 37, 38, 38, 39, 38, 37, 37, 37, 38, 38, 39, 39, 39, 38, 37, 38, 39, 39, 37, 39, 37, 38, 38, 39, 37, 37, 39, 39, 39, 36, 38, 38, 37, 39, 38, 38, 37, 39, 34, 31, 34, 37, 37, 39, 37, 35, 38, 37, 31, 35, 37, 37, 38, 37, 37, 39, 39, 39, 37, 27, 39, 38, 38, 37, 14, 35, 30, 38, 36, 36, 32, 36, 39, 38, 39, 39, 38, 36, 38, 37, 19, 38, 37, 16, 36, 38, 36, 39, 38, 39, 39, 39, 39, 37, 39, 38, 36, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 37, 37, 39, 39, 37, 37, 18, 32, 39, 37, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 38, 38, 38, 39, 38, 39, 38, 38, 36, 37, 36, 39, 38, 37, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 34, 38, 38, 33, 33, 33, 33, 33, 31, 37, 32, 29, 18, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKRGAYGNFWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVASISSGGSTYYPDSVKGRFTISRDNARNILYLQMSSLRSEDTAMYYCAKRGAYGNFWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1529 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16843:3425 (reversed)", "sequence" : "AAGTCAGGTTCAGCTCCAGCAATCTGGACCTGGCCTGGTGGCGCCCTCACAGTGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTCACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGTATCACAAACTATAATTCAGCGCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACATAACTGGAGCTAGGGGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCATTGGTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 16, 16, 33, 38, 38, 38, 33, 38, 39, 16, 37, 39, 16, 36, 38, 38, 34, 32, 15, 38, 39, 37, 39, 39, 37, 15, 33, 36, 36, 38, 14, 32, 14, 15, 14, 33, 16, 16, 16, 16, 16, 37, 39, 38, 37, 16, 32, 37, 37, 16, 37, 16, 37, 39, 39, 39, 16, 32, 38, 17, 16, 35, 38, 17, 37, 38, 15, 37, 14, 37, 37, 39, 33, 37, 38, 17, 33, 38, 39, 30, 14, 29, 36, 31, 16, 17, 16, 33, 35, 38, 39, 17, 17, 33, 38, 39, 39, 15, 37, 36, 33, 14, 14, 36, 36, 36, 37, 27, 15, 37, 39, 15, 37, 38, 38, 34, 38, 15, 38, 38, 38, 39, 39, 15, 38, 39, 39, 39, 39, 36, 14, 35, 34, 37, 36, 37, 38, 30, 33, 38, 38, 17, 16, 20, 37, 33, 24, 30, 20, 34, 31, 34, 26, 15, 26, 15, 12, 23, 27, 15, 13, 38, 32, 26, 15, 33, 38, 26, 25, 13, 12, 13, 12, 27, 13, 13, 35, 35, 38, 35, 27, 27, 14, 35, 28, 15, 13, 13, 27, 16, 16, 16, 27, 16, 16, 16, 29, 14, 14, 16, 27, 14, 39, 33, 35, 34, 37, 37, 16, 38, 37, 16, 27, 14, 38, 32, 30, 16, 39, 38, 37, 13, 13, 38, 31, 31, 16, 39, 35, 39, 37, 38, 17, 37, 17, 39, 35, 39, 38, 37, 16, 39, 37, 38, 29, 33, 38, 29, 37, 37, 36, 33, 17, 39, 36, 33, 15, 36, 15, 32, 37, 17, 17, 37, 33, 38, 37, 16, 37, 39, 39, 34, 37, 39, 37, 34, 15, 37, 33, 17, 16, 17, 33, 16, 38, 36, 33, 16, 16, 17, 16, 15, 14, 14, 14, 38, 37, 33, 39, 37, 36, 39, 39, 38, 38, 38, 39, 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"CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSFTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGIT" } ] 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"AGCTCAGGTCCAACTCCAGCAACCTGGAGCTGAGCTGGTGAGGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGACTTCTGGATACATCTTCACCAGCTACTGGATTCACTGGGTAAAACAGAGGTCTGGGCGGGGCCTTGAGTGGATTGCAAGGATTTATCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGAAATCTGAGGACTCTGCTGTCTATTTCTGTACAAGAGCCGATAACCCTTCTATGGGCTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGCGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 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"TGTGGATGTGCAACTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTACAACTTCTGGGTTCACCTTCACTGATTACTTCATGACCTGGGTCCGCCAGCCTCCAGGAAAGGCACCTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAATACAATCCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATACTTCCCAAGGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCATTTATTTTTGTGCAAGAGATTACTCCGGCTACTTTGACTTCTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDYDWVPDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1564 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17344:3451 (reversed)", "sequence" : "TGTGGAGGTCCAACTGCAACAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGGGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTATACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATCTGGGCTGGTGGAAACACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCACCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCTCAACTGGGGCGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCCTGAGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 32, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 35, 39, 39, 39, 39, 32, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 34, 32, 37, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 36, 36, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 36, 38, 38, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 36, 39, 38, 38, 39, 39, 38, 38, 37, 37, 37, 37, 39, 38, 38, 39, 38, 37, 39, 39, 37, 37, 39, 39, 35, 36, 38, 34, 36, 35, 39, 39, 39, 39, 39, 37, 34, 39, 38, 37, 39, 38, 39, 39, 37, 37, 38, 38, 37, 38, 39, 38, 37, 36, 39, 39, 38, 37, 37, 38, 39, 36, 39, 38, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 34, 37, 39, 37, 39, 38, 37, 39, 39, 39, 37, 39, 39, 38, 39, 37, 39, 39, 38, 33, 33, 39, 39, 36, 39, 38, 38, 33, 36, 39, 39, 39, 39, 39, 38, 38, 34, 37, 39, 37, 38, 37, 18, 39, 37, 37, 38, 36, 38, 37, 17, 34, 14, 38, 39, 39, 38, 39, 38, 39, 38, 36, 34, 38, 38, 38, 38, 37, 37, 39, 39, 39, 37, 39, 38, 38, 36, 38, 39, 39, 39, 39, 38, 38, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 33, 34, 39, 38, 37, 30, 38, 38, 32, 37, 34, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 37, 38, 36, 36, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 34, 36, 32, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQGLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASTGAGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.81%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGFRAAYLDYWGKGTSVSVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "GG" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AY392864" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQGLSITCTVSGFSLTNYGIHWVRQPPGKGLEWLGVIWAGGNTNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCASTGAGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1566 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19889:3451 (reversed)", "sequence" : "GTACGATGTGCAGCTTCAGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGAGTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTACAATGGATTGGAGAAATTAATCCAGATAGCAGAACGATAAACTATGCGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGGAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGACGGGCCTACTATGGTCACTCTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCCTTGACTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 35, 38, 39, 38, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 18, 37, 39, 38, 39, 39, 39, 39, 39, 38, 36, 39, 39, 38, 38, 36, 36, 38, 38, 38, 39, 38, 36, 39, 39, 39, 38, 38, 39, 39, 36, 39, 38, 38, 39, 38, 38, 36, 38, 39, 39, 39, 34, 38, 39, 39, 39, 39, 38, 39, 38, 37, 37, 38, 32, 38, 25, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 38, 39, 36, 39, 38, 34, 34, 37, 36, 39, 39, 39, 39, 39, 37, 36, 35, 38, 38, 38, 34, 38, 38, 34, 38, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 38, 34, 27, 11, 38, 38, 38, 37, 37, 37, 38, 38, 38, 38, 35, 38, 34, 38, 37, 38, 37, 38, 38, 39, 38, 39, 38, 36, 37, 37, 38, 37, 35, 37, 37, 39, 39, 39, 37, 37, 39, 38, 39, 37, 38, 16, 37, 39, 39, 39, 39, 38, 39, 38, 17, 39, 39, 39, 38, 38, 16, 35, 39, 37, 38, 37, 29, 15, 34, 34, 37, 32, 36, 16, 37, 38, 33, 38, 37, 38, 36, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 38, 36, 38, 39, 39, 39, 37, 39, 39, 38, 39, 39, 37, 39, 38, 16, 39, 38, 38, 16, 38, 37, 39, 38, 33, 31, 16, 14, 30, 34, 36, 39, 38, 39, 38, 39, 37, 37, 37, 37, 36, 38, 39, 39, 37, 39, 38, 37, 39, 38, 38, 38, 37, 36, 30, 33, 37, 32, 37, 38, 39, 38, 32, 15, 38, 38, 36, 37, 38, 39, 36, 36, 32, 38, 34, 39, 38, 38, 38, 33, 38, 37, 32, 16, 34, 37, 37, 16, 32, 37, 35, 18, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MSWVRQAPGKGLQWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYAPSLKDKFIISRDNAKNTLYLQMRKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRAYYGHSDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLKLSCAASGFTFGSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV3-7*03" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "99,31% (288/290 nt)" }, { "name" : "Source-Sequence", "value" : "AF062138" }, { "name" : "Source-Mismatches", "value" : "66" }, { "name" : "Source-Identity", "value" : "77.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGKGLQWIGEINPDSRTINYAPSLKDKFIISRDNAKNTLYLQMRKVRSEDTALYYCARRAYYGHSDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1567 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20652:3452 (reversed)", "sequence" : "GGGGGAGGTGCAGCGGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCCATATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAACAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCAGGGGTACGACTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAGAACAACACCCCCATCGGCCTATCCCCTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 30, 35, 35, 32, 32, 37, 37, 38, 37, 38, 34, 38, 15, 36, 15, 37, 36, 39, 39, 39, 37, 37, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 38, 37, 39, 39, 38, 38, 38, 38, 38, 37, 39, 37, 38, 39, 37, 37, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 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38, 39, 36, 36, 37, 36, 36, 19, 37, 37, 32, 38, 37, 33, 33, 37, 37, 37, 33, 33, 32, 31, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGPGLVSPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"ERR346596.1583 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16461:3465 (reversed)", "sequence" : "TACTGACGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATGAGGTATTACAAAGTACTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGTTCATCCCTTGCCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 35, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 35, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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: [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDEVLQSTYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 319, "direction" 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(reversed)", "sequence" : "TAAGCAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACGGGACTACGTAATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGCCTATCCCCTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 36, 39, 38, 37, 38, 39, 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31, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDYVMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"name" : "translation", "value" : "TVTTFPVDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "TVT" }, { "name" : "IMGT_allele", "value" : "IGHD4-17*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-17" }, { "name" : "Source-Sequence", "value" : "AF062181" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRDYVMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1586 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11487:3467 (reversed)", "sequence" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSQW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNHNFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSESYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGDGYYGGAPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, 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false } ], "qualifiers" : [ { "name" : "translation", "value" : "TEAPDIMDAWGQGASVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TE" }, { "name" : "IMGT_allele", "value" : "IGHD1-6*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-6" }, { "name" : "Source-Sequence", "value" : "FJ041115" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVRPGASVKLSCKASGYTFTSQWINWVKQRPGQGLEWIGNIYPSESYTNYNHNFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTRGDGYYGGAPYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1594 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9649:3475 (reversed)", "sequence" : "AGGGGAGGTCCAGCTGCAACAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAAAAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGAGAGACAACCCCTAGAGGGTGATATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCACTGTATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 30, 16, 32, 32, 35, 35, 32, 33, 37, 37, 38, 38, 38, 38, 16, 15, 16, 16, 37, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 32, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 37, 37, 36, 38, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 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37, 37, 16, 38, 37, 37, 34, 37, 37, 37, 37, 33, 33, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMKSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERQPLEGDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYGGSYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGVQGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, 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39, 37, 38, 36, 16, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 32, 36, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 35, 39, 34, 38, 18, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGADLMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYRFNSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFNEKFKGKATFTAYTSSNTAYMQISSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "53" }, { "name" : "Source-Identity", "value" : "81.97%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : 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"QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1602 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14374:3479 (reversed)", "sequence" : "CTGTGACGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGACATGGGGGGCGGAGAGGGCTCTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCATTGAGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 32, 37, 37, 33, 33, 33, 33, 37, 38, 36, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 35, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 37, 38, 39, 37, 38, 37, 37, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 36, 39, 38, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 36, 38, 37, 34, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 35, 38, 33, 38, 39, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 37, 38, 34, 38, 38, 38, 39, 38, 39, 39, 36, 37, 38, 39, 39, 39, 39, 39, 39, 36, 38, 24, 37, 39, 39, 38, 39, 37, 37, 39, 36, 39, 39, 39, 39, 39, 39, 37, 34, 38, 39, 39, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 36, 38, 37, 38, 38, 39, 38, 38, 14, 33, 38, 37, 38, 36, 39, 39, 38, 38, 39, 39, 37, 37, 38, 39, 39, 38, 37, 37, 37, 37, 39, 38, 39, 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"translation", "value" : "DVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHGGRRGLYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 368, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARHGGRRGLYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1603 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16577:3479 (reversed)", "sequence" : "CTGTGAGGTGCACCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCTATCCCTTGCCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 34, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 24, 38, 38, 38, 38, 37, 39, 39, 39, 37, 38, 39, 39, 37, 34, 38, 37, 38, 39, 39, 38, 38, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 37, 37, 39, 39, 39, 39, 39, 37, 38, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 37, 39, 37, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 37, 38, 34, 38, 39, 39, 36, 17, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 38, 38, 37, 38, 38, 37, 38, 37, 33, 33, 33, 33, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1604 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10694:3479 (reversed)", "sequence" : "GCGCGAGGTTCAGCTGCAGCAGTCTGGACCTGAACTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTCACTCATTCACTGGTTACAACATGAACTGGGTGAAACAGAGCCATGGAAAGAGCCTTTAGTGGATTGGAAATATTGATCCTTACTATGGTACTACTACCTTCAACCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTAACATCTGAGGACTCTGCAGTCTATTACTGTACAAGATCAAGGGCCTACTTTAGGGACTGGTTTGCTTACTGGGGCCAAGGGACCCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTTATCCCTTGGCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 33, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 19, 33, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 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37, 38, 38, 37, 38, 37, 19, 37, 31, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSL*WIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GHSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TFNQKFKDKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPYYGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSRAYFRDWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", 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"translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GITVSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGYVDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.23%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", 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"EVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLASEDSAVYFCARGVPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1622 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19391:3498 (reversed)", "sequence" : "ATCTCAGGTTCAGCTTCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTACTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCAAATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAATTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGACTATAGGTACGACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCCCTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 35, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 37, 38, 33, 39, 39, 20, 37, 38, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 39, 39, 38, 39, 39, 38, 38, 38, 39, 37, 39, 39, 39, 39, 37, 37, 38, 36, 38, 36, 38, 33, 36, 39, 37, 37, 39, 38, 38, 38, 38, 38, 38, 37, 35, 37, 33, 37, 39, 38, 36, 37, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 19, 32, 33, 33, 33, 33, 33, 37, 33, 33, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKAKFTADTSSNTAYMQFSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYRYDYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSYDGFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YSYD" }, { "name" : "IMGT_allele", "value" : "IGHD2-12*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-12" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGTTNYNEKFKGKAKFTADTSSNTAYMQFSSLTSEDSAVYYCARDYRYDYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1623 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16490:3498 (reversed)", "sequence" : "GCACCAGGTCCAGCTTCAGCAATCTGGGGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGGCAGTACTTACTACAATGAAATGTTCAAGGGCAAGACAACACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGATGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTATTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCCCTGCATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 30, 37, 39, 39, 39, 38, 39, 38, 39, 37, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 37, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 38, 39, 38, 38, 38, 37, 39, 39, 38, 38, 39, 38, 39, 38, 37, 37, 38, 38, 38, 39, 39, 38, 38, 38, 33, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 37, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LLVFRCL" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1624 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17952:3499 (reversed)", "sequence" : "ATGGCAGGTGCAGCTGAAGGAGTCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTTCACCTTTACCAGCTCCTGGTTGCACTGGGCGAAGCCGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACGCTGACTTTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAATTACTACGGTAGTAGTTCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCATTGGGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 34, 16, 16, 16, 16, 16, 37, 37, 37, 38, 16, 16, 15, 32, 15, 33, 37, 38, 39, 39, 15, 32, 15, 15, 16, 35, 35, 38, 16, 33, 37, 15, 16, 15, 33, 15, 37, 16, 32, 38, 15, 38, 36, 15, 33, 32, 16, 16, 32, 17, 16, 17, 16, 16, 32, 32, 37, 16, 38, 33, 16, 16, 33, 33, 16, 32, 14, 37, 38, 33, 38, 35, 38, 37, 38, 15, 29, 37, 16, 37, 16, 33, 16, 31, 31, 37, 16, 16, 30, 37, 38, 38, 38, 16, 15, 16, 33, 32, 37, 35, 37, 35, 34, 37, 39, 14, 29, 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36, 37, 38, 38, 37, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELARPGASVRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TCGCGAGGTGCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCACTGGGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 32, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 36, 35, 37, 38, 39, 36, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 37, 37, 39, 38, 39, 38, 38, 38, 38, 38, 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37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTAVNVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFGRYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.13%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : 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"EVMLVESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGAGITYYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCAKLTWDEGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1638 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21166:3510 (reversed)", "sequence" : "TCTGGATGTGAAGCTTCAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCGCTTTTAGTGACACCTGGCTGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCCTGAGTGGGTTGCTGAAATTAGAACCAAAGCTGATGATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCATAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGTACCCCCCATCCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCTGTCCATCCCCTGTATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 36, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 36, 36, 38, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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"FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNENFKGKVTLTADKAYSTAYMQLSSLTSEDSAVYFC" } ] }, { 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"QVQLQQSGADLVKPGASVKLSCTTSGFNIKDTFMHWVKQRPEQGLEWIGRIDPASGNTKYDPKFQGKATITADTSSNKVSLQLSGLTSEDTAVYYCAHDAPFTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1545 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11108:3436 (reversed)", "sequence" : "CCTTGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCCCACAGAGCCTGTCCATCAGTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGTGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCCGACCGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCATTGGGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 37, 33, 37, 38, 19, 33, 37, 39, 39, 20, 37, 37, 37, 37, 38, 39, 39, 38, 39, 39, 38, 37, 38, 39, 39, 36, 39, 36, 38, 38, 17, 36, 36, 36, 35, 37, 39, 33, 18, 33, 37, 38, 39, 38, 39, 33, 37, 38, 39, 35, 37, 33, 37, 39, 39, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFNTYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADSVKDRFTISRDDSQSMLYLQMNNLKTEVTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRSKSNNYAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 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"ERR346596.1554 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17764:3446 (reversed)", "sequence" : "TGGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGCGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCTATCCACTGTCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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: "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDAWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1559 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19749:3447 (reversed)", "sequence" : "GTGTGAGGTCCAACTGCAACAGTCTGGGGCAGAGCTTGCGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAAACCCTCTTTTTACTACGGTAGTAGTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGAGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 18, 32, 37, 37, 37, 37, 37, 37, 37, 32, 37, 38, 38, 37, 37, 37, 38, 38, 38, 39, 39, 38, 36, 34, 34, 30, 36, 30, 36, 32, 37, 37, 38, 39, 37, 35, 32, 34, 17, 32, 36, 37, 38, 38, 36, 38, 30, 32, 36, 32, 38, 38, 39, 39, 37, 37, 39, 39, 37, 37, 37, 35, 36, 38, 39, 37, 36, 37, 39, 33, 30, 38, 37, 18, 33, 38, 38, 37, 39, 39, 39, 37, 18, 33, 38, 33, 38, 39, 36, 37, 38, 39, 39, 39, 33, 39, 30, 38, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 36, 37, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 36, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 38, 39, 37, 37, 37, 39, 39, 39, 39, 37, 38, 38, 38, 34, 38, 39, 28, 38, 37, 37, 37, 38, 39, 35, 39, 33, 35, 37, 39, 37, 36, 38, 39, 39, 38, 37, 38, 38, 36, 39, 39, 39, 38, 37, 39, 38, 38, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 38, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 36, 37, 36, 39, 38, 34, 37, 39, 39, 39, 39, 39, 37, 38, 33, 39, 38, 32, 39, 39, 36, 39, 38, 39, 37, 38, 38, 15, 27, 34, 15, 39, 39, 39, 39, 39, 39, 39, 34, 34, 38, 36, 36, 39, 39, 38, 39, 39, 39, 39, 39, 36, 37, 39, 39, 39, 39, 37, 38, 37, 38, 38, 38, 39, 38, 38, 39, 38, 39, 37, 38, 14, 34, 38, 34, 38, 37, 37, 38, 37, 36, 39, 39, 39, 38, 33, 38, 38, 33, 38, 29, 17, 37, 30, 15, 15, 27, 16, 33, 15, 37, 14, 14, 14, 14, 29, 14, 14, 36, 30, 16, 31, 29, 16, 16, 37, 38, 39, 36, 31, 33, 16, 14, 14, 14, 14, 36, 14, 37, 33, 16, 14, 15, 38, 33, 16, 32, 14, 38, 38, 36, 33, 32, 32, 14, 14, 38, 36, 15, 36, 15, 34, 37, 36, 32, 37, 32, 38, 32, 38, 37, 32, 32, 35, 37, 37, 37, 32, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TKPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTKPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1560 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22476:3450 (reversed)", "sequence" : "GCAGCAGGTTCAGCTGCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCTGTCAAGTTGTCCTGCCCAGTTTCTGGCTTCTACATTCAAGACACCTATTTGCACTGGGTGAAGCAGCGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGTTTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTACCTATTACTACGGTAGTAGCTGGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTTCATCCCTTGAAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 16, 29, 33, 37, 32, 37, 16, 35, 35, 38, 38, 38, 16, 16, 16, 33, 16, 32, 37, 37, 39, 37, 37, 39, 33, 15, 36, 15, 36, 36, 15, 36, 38, 33, 38, 38, 39, 39, 32, 16, 33, 38, 15, 32, 14, 14, 14, 32, 36, 36, 39, 16, 16, 35, 32, 17, 17, 32, 35, 38, 16, 16, 33, 38, 38, 16, 16, 15, 14, 16, 30, 16, 35, 17, 17, 35, 17, 31, 33, 36, 32, 39, 16, 17, 33, 31, 38, 37, 16, 31, 33, 17, 31, 37, 38, 37, 37, 33, 33, 16, 16, 33, 35, 17, 33, 16, 33, 15, 37, 36, 38, 14, 34, 16, 16, 37, 16, 15, 15, 14, 27, 14, 36, 27, 14, 27, 16, 16, 16, 15, 27, 14, 30, 14, 27, 34, 27, 31, 15, 27, 15, 14, 16, 27, 31, 15, 15, 27, 37, 39, 12, 14, 14, 16, 27, 16, 25, 37, 16, 29, 27, 27, 10, 12, 27, 29, 38, 37, 35, 37, 18, 35, 24, 28, 15, 33, 27, 34, 37, 24, 35, 24, 32, 32, 13, 13, 15, 15, 31, 26, 14, 14, 36, 32, 31, 25, 14, 14, 33, 33, 31, 32, 32, 13, 33, 24, 15, 13, 32, 15, 37, 38, 33, 38, 15, 33, 27, 15, 32, 15, 36, 37, 33, 30, 35, 38, 33, 32, 36, 35, 38, 34, 25, 27, 13, 15, 13, 15, 39, 37, 39, 39, 39, 38, 38, 36, 37, 34, 35, 38, 39, 37, 37, 38, 15, 38, 33, 39, 39, 39, 39, 37, 30, 16, 27, 37, 16, 27, 16, 38, 33, 38, 14, 27, 14, 14, 30, 39, 38, 38, 35, 38, 35, 33, 16, 34, 15, 38, 37, 37, 16, 33, 33, 18, 33, 19, 30, 19, 19, 37, 14, 14, 37, 14, 36, 19, 37, 37, 18, 36, 18, 37, 36, 14, 38, 38, 37, 36, 34, 33, 18, 33, 35, 19, 38, 18, 37, 36, 36, 36, 34, 33, 38, 33, 37, 39, 37, 38, 33, 33, 38, 37, 33, 16, 18, 20, 20, 32, 38, 37, 17, 17, 39, 37, 16, 38, 33, 18, 16, 16, 18, 34, 15, 32, 38, 38, 37, 37, 30, 36, 38, 38, 38, 38, 38, 39, 36, 36, 36, 36, 36, 38, 37, 20, 19, 34, 37, 32, 33, 37, 37, 37, 37, 32, 18, 18, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQESGAELVKPGASVKLSCPVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFYIQDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATYYYGSSWGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQESGAELVKPGASVKLSCPVSGFYIQDTYLHWVKQRPEQGLEWIGRFDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATYYYGSSWGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1684 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15340:3552 (reversed)", "sequence" : "CAACGAGGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCATGGTGGTGGTACCACCTACTATTCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATTTATTACTGTACAAGACATGGTGGTTACTACCCTTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGGTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 37, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 38, 34, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 36, 32, 38, 38, 36, 18, 36, 36, 34, 38, 39, 39, 38, 38, 39, 39, 39, 38, 37, 38, 37, 37, 36, 38, 38, 38, 37, 37, 38, 37, 36, 33, 38, 38, 37, 36, 33, 33, 35, 33, 33, 37, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISHGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRHGGYYPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1685 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14352:3554 (reversed)", "sequence" : "ACGAGATGTGCACCTGGTGGAGTCTGGGGGAGACTTAGTGTACCCTGGAGGGTCCCTAAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTTCCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACACGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGTACTAACACCTATTATCCAGACAGTATGAAGGGGCGATTCACCATCTCCCGAGACAATGCCAAGAACACCCTATACCTGCAAATGAGCAGTCGGAGGTCTGAGGACACAGCCATGTATTACTGTACAAGACGGGGAATTTACGACGAGAGGACTGCTATGGACTACTGGGGTCGAGGAACCTCAGTCACCGTCTCCTCGGCTACAACAACAGCCCCATCGGCTCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 31, 32, 32, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 36, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 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39, 39, 38, 37, 39, 38, 37, 17, 37, 39, 37, 37, 39, 39, 39, 38, 30, 14, 36, 36, 29, 31, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 38, 32, 39, 37, 36, 14, 36, 36, 36, 32, 38, 36, 36, 38, 37, 37, 37, 32, 38, 32, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 36, 32, 38, 38, 38, 38, 38, 38, 37, 38, 32, 32, 35, 32, 16, 32, 35, 32, 16, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGDLVYPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDTRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSMKGRFTISRDNAKNTLYLQMSSRRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGRGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGIYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.84%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGDLVYPGGSLKLSCAASGFTFSSYGMSWVRQTPDTRLEWVATINSGGTNTYYPDSMKGRFTISRDNAKNTLYLQMSSRRSEDTAMYYCTRRGIYDERTAMDYWGRGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1687 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20515:3557 (reversed)", "sequence" : "GGCAGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCGGCCTCTGGATTCACTTTCAGTACCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATTTCCAGAGACAATGCCAAGAACACCCTGTATTTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATATGTTACTGTGCAAGAACCCCCTACTATAGGTACGACGATTACTATGCTATGGACTACTGGGGTCGAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCCTTGGGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 37, 32, 37, 37, 37, 20, 37, 38, 38, 36, 37, 38, 37, 37, 38, 39, 37, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 37, 39, 37, 38, 33, 37, 38, 37, 38, 36, 37, 38, 38, 38, 39, 38, 38, 39, 39, 36, 37, 37, 37, 38, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAICYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYRYVLDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "FJ755846" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSTYAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAICYCARTPYYRYDDYYAMDYWGRGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1688 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8768:3559 (reversed)", "sequence" : "TCTGGAAGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTACAACTTCTGGGTTCACCTTCACTGATTACTTCATGACCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAACCAAACCTAATGGTTACACAACAGAATACAATCCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAGGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCATTTATTATTGTGCAAGAGATTACTCCGGCTACTTTGACTTCTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTTCCCTTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 37, 37, 37, 37, 35, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 37, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 34, 36, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 34, 39, 38, 38, 39, 38, 38, 36, 36, 17, 33, 33, 17, 36, 18, 38, 37, 38, 38, 39, 39, 38, 20, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDEVLQSIYWYFGV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "96.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : 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"EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTDYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDEVLQSIYWYFGVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1690 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16437:3560 (reversed)", "sequence" : "TGGAGAGGTTCAGCTCCAGCAGTCTGACGCTGAGTTGGTGAAACCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGAAGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTAAAAGATCTGATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCATTGAAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 34, 38, 38, 38, 38, 38, 36, 38, 38, 39, 38, 39, 37, 37, 39, 39, 37, 37, 39, 39, 39, 39, 38, 38, 37, 38, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"TTGTCAGGTGCAGCTGAAGCAGTCCGGACCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTATTTTTTGAACTGGGTGAGGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCGACAACCAGAGGTTCAAGGGCAAGGCCACATTGACTGTTGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAAGACTCTGTAGTCTATTATTGTGGCTTCTACTATGGTAACTACGTGGGAGCTCTTGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCCTTGCCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 38, 36, 37, 18, 38, 38, 38, 39, 39, 39, 35, 36, 39, 39, 38, 37, 36, 37, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 37, 39, 37, 39, 39, 39, 39, 34, 33, 37, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 34, 33, 39, 36, 39, 37, 39, 39, 38, 37, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 28, 37, 38, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 33, 33, 38, 34, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 36, 24, 38, 36, 39, 39, 39, 38, 39, 39, 38, 38, 37, 37, 38, 39, 37, 39, 39, 38, 39, 37, 38, 38, 38, 39, 24, 35, 37, 36, 35, 32, 36, 38, 36, 39, 38, 38, 39, 39, 36, 36, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 37, 37, 38, 36, 39, 39, 39, 39, 38, 35, 37, 30, 19, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 33, 36, 38, 39, 38, 38, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 36, 39, 38, 38, 39, 37, 36, 32, 37, 39, 38, 37, 32, 33, 17, 37, 39, 37, 32, 17, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 38, 34, 34, 37, 32, 33, 33, 32, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNWVRQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FDNQRFKGKATLTVDKSSSTAHMELLSLTSEDSVVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFYYGNYVGALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASVKISCKASGYSFTGYFLNWVRQSHGKSLEWIGRINPYNGDTFDNQRFKGKATLTVDKSSSTAHMELLSLTSEDSVVYYCGFYYGNYVGALDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1696 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13735:3566 (reversed)", "sequence" : "GTCCGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCGGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGACTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCCACTATCCAGACACTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGGCAAGAACACCCTGTATGTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACAACATTACTACGGCTCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCTATCCACTGAGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 33, 34, 34, 29, 32, 37, 37, 37, 38, 38, 38, 38, 36, 37, 38, 34, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 38, 38, 38, 34, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 38, 38, 38, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 34, 35, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 35, 36, 37, 37, 37, 37, 24, 37, 35, 38, 38, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 37, 38, 39, 38, 38, 38, 38, 38, 38, 37, 38, 38, 37, 39, 37, 37, 38, 38, 38, 37, 37, 37, 39, 37, 37, 38, 38, 37, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 37, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 37, 30, 36, 38, 37, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 36, 39, 38, 37, 37, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 37, 38, 39, 36, 36, 30, 38, 39, 37, 37, 38, 38, 37, 38, 39, 39, 34, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 36, 39, 37, 34, 38, 37, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 32, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYPDTVKGRFTVSRDNGKNTLYVQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQHYYGSYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "21" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISSGGGSTHYPDTVKGRFTVSRDNGKNTLYVQMSSLKSEDTAMYYCARQHYYGSYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1697 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9257:3566 (reversed)", "sequence" : 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37, 38, 38, 37, 37, 38, 37, 33, 32, 33, 33, 33, 37, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TAACGAGGTCCAACTGCAACAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCAGGCTATACCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTGATCCTTCCAATAGTGAAAGTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGAATGTAGACAAATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTTCAGTCTATTACTGTGCAAGGAACCACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGCCCATCCCCTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 32, 32, 32, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 34, 34, 39, 38, 37, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 39, 38, 17, 38, 39, 38, 39, 38, 39, 39, 20, 38, 39, 37, 38, 37, 38, 38, 37, 19, 38, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 37, 38, 39, 37, 37, 38, 38, 38, 39, 38, 38, 39, 39, 38, 39, 37, 14, 18, 33, 38, 37, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 37, 39, 39, 38, 39, 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"ATAGGAGGTCCAGCTGCAACAATCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATAACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGAGGTGGAAGCACAGACTACAATGCAGCTTTCATGTCCAGACTGAGCATCACCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACTGCCATATACTACTGTGCCAAAGGGACTGGGAACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCCCTGCAGCCAAAACGACACCCCCATCGGTTTATCCCTTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 37, 37, 32, 33, 37, 37, 37, 38, 38, 38, 33, 19, 37, 35, 38, 38, 32, 33, 37, 34, 38, 37, 39, 39, 38, 39, 37, 34, 37, 39, 39, 39, 39, 32, 38, 39, 37, 37, 37, 34, 17, 33, 38, 38, 39, 39, 39, 37, 37, 33, 38, 39, 37, 37, 37, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 20, 38, 38, 38, 37, 39, 39, 39, 38, 20, 37, 38, 39, 37, 39, 37, 39, 39, 38, 39, 39, 33, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 36, 38, 38, 39, 38, 39, 39, 39, 37, 39, 39, 38, 37, 38, 38, 37, 38, 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33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFMSRLSITKDNSKSQVFFKMNSLQADDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWRGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVPA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKGTGNGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : 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29, 32, 18, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLGSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLFTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDYSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLGSLTSDDSAVYFCARRDYSFAYWGQGTLFTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1652 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12423:3527 (reversed)", "sequence" : 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"AGACCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCTCTGGCTACAACTTGAACTGGGTGAAGCAGAGCAATGGACAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGATACTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAGATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAAGACTCTGCAGTCTATTACTGTGCAAGAAAGGCCTACTATACTAACTGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCACTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 36, 36, 38, 38, 38, 37, 39, 39, 39, 32, 38, 39, 33, 38, 38, 38, 38, 39, 39, 39, 39, 33, 37, 39, 38, 36, 33, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 37, 38, 39, 39, 37, 35, 38, 37, 37, 39, 39, 39, 39, 37, 39, 39, 38, 39, 33, 38, 39, 39, 39, 39, 37, 36, 34, 16, 14, 33, 36, 18, 34, 37, 37, 38, 33, 38, 36, 37, 38, 37, 39, 37, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 37, 37, 37, 37, 37, 37, 37, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNWVKQSNGQSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFSGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDRSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARKAYYTNWWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGPELAKPGASVKMSCKASGYRFTDYVMHWVKQSN GKSLEWIGSTNPYIDYTNYKENFKGRATVTVDKSSSTVYMQLNSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1S45*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S45" }, { "name" : "Videntity", "value" 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"ATGGGAGGTGCACCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 30, 32, 32, 37, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 37, 38, 37, 17, 36, 39, 39, 39, 37, 39, 18, 38, 39, 39, 39, 38, 38, 38, 36, 36, 38, 38, 37, 39, 35, 38, 39, 37, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 38, 39, 39, 39, 17, 37, 37, 37, 37, 39, 39, 39, 39, 33, 37, 37, 38, 39, 33, 38, 38, 38, 39, 38, 39, 37, 38, 38, 38, 37, 38, 38, 37, 36, 38, 38, 38, 39, 39, 38, 38, 38, 38, 34, 36, 37, 34, 38, 36, 30, 37, 38, 39, 39, 39, 39, 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34, 38, 38, 33, 32, 33, 32, 30, 37, 37, 33, 32, 30, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDISWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1659 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15524:3531 (reversed)", "sequence" : "ATCAGAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGTTCATCCCCTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELLKPGTSVKLSCKASGYTFTRYWMHWVKQRPGQGLEWIGELNPSNGHTNYNGKFKNKATVTVDKSSSTAYMQLSSLTSEDSAVYYCARMITTRGFDYWGQGTTLTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1662 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22450:3536 (reversed)", "sequence" : "GCGGCAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCCGTGAAGATTTCCTGCCAAGCTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAATGGATTGGACGGATTTATCCTGGAGATGGAAATACTAACTACAATGGGAAGGTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCCCTCTATGATTACGACGGACTCTCCTGGGTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCAAAAACGACACCCCCATCAGCCCATCCCTTGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 31, 32, 16, 35, 31, 34, 35, 16, 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"min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKVKGKATLTADKSSTTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ALYDYDGLSWVAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"ATAAGACGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAAGGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGCTAACTGGGAAGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCAAAAACAACAGCCCCATCAGCCTATCCCTTGTCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 32, 37, 37, 33, 33, 33, 31, 37, 38, 38, 38, 38, 38, 38, 38, 38, 36, 38, 39, 39, 39, 39, 34, 20, 37, 36, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 38, 39, 39, 39, 39, 33, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 35, 38, 38, 39, 39, 39, 39, 39, 34, 38, 37, 39, 35, 38, 39, 39, 39, 39, 37, 39, 39, 39, 35, 38, 39, 38, 39, 39, 37, 39, 34, 38, 37, 18, 37, 39, 39, 38, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 37, 34, 33, 27, 38, 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37, 16, 16, 37, 32, 31, 32, 37, 37, 37, 32, 16, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQRNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGLTGKDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQRNTLRAEDSATYYCAREGLTGKDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1664 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22785:3536 (reversed)", "sequence" : 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16, 32, 32, 32, 32, 16, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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38, 38, 37, 33, 33, 33, 37, 34, 37, 32, 29, 18, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVQGRFTISRDNAKNSLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : 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"AGATCAGGTGCAGCTGAAGGAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTGTTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTTATCCCTTGATAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 30, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 34, 37, 39, 39, 39, 39, 38, 39, 32, 37, 30, 36, 36, 38, 38, 39, 36, 39, 39, 33, 37, 39, 39, 39, 39, 38, 39, 34, 39, 39, 39, 39, 39, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 37, 17, 18, 17, 38, 38, 38, 37, 39, 39, 39, 39, 36, 37, 38, 37, 39, 38, 37, 37, 33, 38, 39, 39, 39, 39, 39, 38, 39, 36, 39, 38, 37, 39, 36, 39, 39, 37, 39, 39, 36, 14, 37, 38, 36, 38, 17, 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", 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"ACGACAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 37, 38, 38, 38, 38, 34, 39, 39, 39, 39, 37, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 34, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 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33, 35, 35, 32, 30, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1674 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10254:3541 (reversed)", "sequence" : "CGATGAGGTGCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTTAGTGAAGATATCCTGCAAGGCTTCTGGTTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAGATGGTAGTACTAAGTACAATGAGAAATTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACTTCTGAGAACTCTGCAGTCTATTTCTGTGCAAGAGAGGGGGGCTATTACTACGGTAGTAGCCCTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGTCTATCCCCTGTGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 36, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 37, 39, 38, 39, 38, 39, 39, 37, 37, 37, 30, 37, 39, 39, 39, 39, 39, 38, 39, 38, 33, 37, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 38, 37, 39, 39, 37, 37, 37, 34, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 33, 38, 38, 37, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 37, 37, 38, 38, 38, 32, 36, 38, 38, 36, 39, 38, 39, 39, 39, 34, 38, 39, 39, 38, 38, 15, 37, 38, 38, 38, 34, 35, 37, 38, 37, 37, 37, 38, 37, 37, 38, 39, 39, 36, 37, 38, 38, 39, 39, 37, 37, 37, 37, 39, 38, 38, 39, 39, 37, 39, 37, 39, 39, 37, 39, 38, 38, 37, 37, 39, 33, 39, 35, 39, 36, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 37, 39, 36, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 38, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 32, 37, 39, 39, 39, 39, 38, 38, 32, 32, 38, 37, 39, 38, 38, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGALVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSENSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGGYYYGSSPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 326, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "PGLLP" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WFASWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGALVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADKSSSTAYMQLSSLTSENSAVYFCAREGGYYYGSSPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1675 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14103:3542 (reversed)", "sequence" : "AGAAGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCACCTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAGTGGTTACACAACAGCATACAGTGCGTCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAAGTCCCAACGCATCCTCTATCTTCAAATTAACACCCTGAGAGCTGAGGACAGTGCCACTTATGACTGTGCAAGAGAATAGGGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGCTTATCCCCTGCAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 32, 16, 29, 34, 37, 32, 37, 32, 37, 37, 38, 16, 37, 38, 38, 38, 36, 37, 32, 38, 39, 39, 39, 39, 38, 16, 37, 36, 38, 38, 38, 38, 39, 39, 15, 36, 38, 16, 17, 37, 38, 39, 39, 39, 39, 38, 32, 38, 38, 36, 36, 39, 33, 38, 39, 39, 39, 36, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 16, 33, 37, 39, 39, 39, 38, 39, 33, 38, 37, 38, 39, 39, 33, 37, 39, 39, 37, 38, 38, 33, 33, 38, 38, 38, 33, 38, 17, 33, 37, 38, 38, 16, 16, 16, 37, 34, 34, 36, 39, 39, 39, 38, 34, 37, 38, 38, 36, 36, 38, 39, 39, 15, 38, 33, 27, 37, 38, 39, 32, 30, 15, 31, 37, 38, 39, 38, 39, 39, 39, 38, 14, 30, 14, 32, 34, 30, 25, 30, 11, 33, 37, 39, 37, 37, 10, 28, 16, 27, 24, 14, 27, 34, 2, 38, 38, 38, 38, 2, 15, 35, 36, 35, 38, 12, 2, 2, 26, 27, 25, 15, 15, 2, 26, 38, 38, 39, 38, 39, 39, 27, 2, 25, 26, 9, 34, 24, 34, 26, 11, 13, 13, 31, 32, 27, 24, 27, 24, 38, 36, 13, 38, 38, 27, 14, 34, 33, 24, 38, 37, 33, 16, 37, 16, 24, 37, 29, 2, 24, 33, 38, 31, 27, 28, 14, 15, 16, 30, 15, 38, 35, 30, 16, 31, 31, 16, 16, 31, 17, 17, 17, 37, 31, 17, 17, 30, 27, 14, 33, 15, 15, 17, 27, 33, 29, 27, 16, 34, 16, 16, 33, 37, 37, 39, 39, 39, 37, 33, 15, 27, 16, 17, 29, 33, 17, 37, 38, 37, 16, 33, 15, 33, 37, 33, 37, 35, 37, 31, 31, 17, 17, 16, 16, 16, 33, 16, 36, 38, 37, 33, 14, 32, 37, 36, 14, 38, 33, 15, 29, 14, 36, 14, 38, 38, 34, 38, 36, 32, 16, 39, 38, 36, 16, 39, 36, 37, 33, 32, 16, 16, 38, 39, 36, 30, 14, 38, 36, 38, 37, 34, 38, 35, 39, 39, 38, 35, 16, 38, 15, 39, 39, 39, 39, 39, 36, 36, 36, 38, 39, 38, 38, 38, 37, 38, 16, 38, 33, 16, 16, 32, 32, 35, 35, 37, 37, 37, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAPS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYSASVKGRFTISRDKSQRILYLQINTLRAEDSATYDC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKASGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARE*GYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAPSGFTFTDYYMSWVRQPPGKALEWLGFIRNKASGYTTAYSASVKGRFTISRDKSQRILYLQINTLRAEDSATYDCARE*GYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1676 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17845:3542 (reversed)", "sequence" : "CCGGGAGGTGCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTGTTACTGTACAAGAAGATCTACTATGACCACGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGTCCATCCACTGTATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 35, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 36, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 35, 38, 39, 39, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 24, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 37, 19, 38, 39, 39, 39, 37, 39, 39, 36, 38, 36, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 33, 37, 38, 19, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 16, 39, 38, 37, 37, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 37, 39, 34, 39, 39, 39, 39, 39, 38, 38, 34, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVCYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRSTMTTFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTDYYMKWVKQSHGKSLEWIGDINPNNGDTFYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVCYCTRRSTMTTFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1679 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16192:3546 (reversed)", "sequence" : "TCCTGAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACGGGACTACGTAATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGTCTATCCCCTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 37, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 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18, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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32, 38, 37, 38, 38, 37, 37, 37, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1802 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17389:3640 (reversed)", "sequence" : 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{ "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGWDYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GG" }, { "name" : "allele", "value" : "IGHD-ST4*01" }, { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCARNHRGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1804 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21194:3641 (reversed)", "sequence" : "ACAGGAGGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGTACAGTGCCACTTATTACTGTGCAATAGATAATGGTAACTACGATTACCATCCTATCAACCACAACAGTCCACGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCCTTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 32, 32, 37, 37, 36, 33, 38, 37, 37, 32, 37, 37, 38, 36, 39, 39, 37, 37, 39, 39, 39, 38, 38, 36, 38, 38, 35, 39, 38, 38, 38, 38, 37, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 36, 34, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 39, 39, 39, 39, 39, 39, 38, 37, 39, 37, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 32, 38, 38, 39, 34, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 37, 37, 36, 38, 38, 36, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 37, 37, 39, 37, 38, 37, 37, 39, 39, 39, 37, 38, 37, 39, 39, 38, 38, 39, 39, 38, 39, 39, 37, 37, 37, 37, 39, 39, 39, 38, 39, 39, 39, 37, 39, 37, 35, 39, 39, 37, 33, 37, 37, 38, 38, 32, 37, 36, 37, 37, 38, 38, 38, 38, 37, 33, 26, 34, 37, 37, 36, 37, 37, 33, 37, 37, 37, 37, 37, 37, 21, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 35, 39, 38, 31, 30, 33, 33, 37, 38, 34, 32, 37, 30, 15, 31, 17, 31, 16, 37, 16, 38, 33, 27, 16, 16, 31, 17, 17, 37, 15, 37, 38, 33, 27, 16, 29, 29, 33, 17, 17, 29, 17, 33, 38, 38, 33, 27, 33, 16, 16, 37, 17, 17, 17, 38, 17, 38, 33, 17, 16, 16, 37, 17, 36, 37, 37, 15, 29, 38, 38, 38, 33, 17, 33, 14, 16, 16, 33, 15, 31, 17, 17, 33, 14, 14, 15, 14, 14, 33, 16, 17, 16, 14, 16, 16, 14, 14, 14, 14, 14, 16, 36, 34, 29, 37, 32, 33, 17, 33, 34, 14, 14, 36, 32, 14, 33, 33, 16, 14, 15, 15, 37, 16, 32, 14, 33, 34, 37, 38, 37, 14, 32, 15, 15, 15, 32, 36, 37, 32, 35, 37, 16, 32, 16, 37, 33, 33, 34, 33, 16, 16, 32, 34, 16, 33, 16, 29, 16, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEYSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NSPRTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIDNGNYDYHPINH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEYSATYYCAIDNGNYDYHPINHNSPRTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1806 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17135:3644 (reversed)", "sequence" : 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39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGGVYYAYDGAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 327, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRGGVYYAYDGAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1807 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18389:3644 (reversed)", "sequence" : "GCCACAGGTCCAACTGCAGCAACCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCAAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTCCATCCCTTGCTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 38, 39, 38, 37, 37, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 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37, 38, 33, 37, 33, 37, 37, 39, 39, 36, 37, 38, 38, 38, 37, 36, 38, 32, 17, 32, 36, 30, 39, 37, 37, 38, 37, 38, 38, 38, 36, 37, 32, 37, 30, 33, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1808 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21066:3644 (reversed)", "sequence" : "CGAGGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACCCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGTCAGGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGGCCCCCATGATGATGATATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGGGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 33, 38, 38, 38, 38, 38, 37, 38, 38, 38, 37, 39, 35, 37, 37, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 36, 38, 39, 37, 39, 38, 39, 38, 37, 38, 36, 37, 36, 38, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 38, 39, 38, 37, 37, 37, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 38, 37, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 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37, 36, 38, 30, 36, 36, 37, 35, 36, 33, 34, 38, 37, 38, 37, 38, 38, 38, 34, 33, 32, 31, 33, 33, 32, 33, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKPSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNVRNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGPHDDDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKPSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNVRNNLYLQMSSLKSEDTAMYYCARGPHDDDMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1809 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11393:3645 (reversed)", "sequence" : "ATATCAGGTGCAGCTGAAGCAGTCTGGACCTGAGCTAGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGTTACTACATGCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAGTTGTTACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTTACTGTAGACACATCCTCCAGCACAGCCTACATGCAGTTCAACAGCCTGACATCTGAAGACTCTGCGGTCTATTACTGTGCAAGATCTTGCGGGGCTTATGGTTACGACGGGGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCCTTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 37, 39, 39, 33, 38, 39, 39, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISCYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSCGAYGYDGGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 377, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" 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37, 37, 39, 39, 39, 39, 39, 39, 39, 35, 37, 37, 17, 38, 39, 39, 39, 39, 39, 37, 17, 38, 34, 17, 39, 39, 37, 38, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 37, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 38, 36, 36, 39, 36, 14, 38, 38, 34, 39, 39, 39, 39, 39, 39, 39, 37, 34, 37, 18, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 36, 39, 39, 39, 39, 39, 39, 38, 35, 38, 39, 36, 36, 36, 38, 38, 37, 39, 38, 39, 39, 37, 32, 39, 39, 39, 39, 39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 37, 37, 33, 38, 38, 38, 34, 33, 32, 33, 33, 37, 37, 37, 32, 32, 33, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCTTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNPSVKGRFTISRDNSQGILYLQMNTLRAEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKPNGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYSGYFGF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCTTSGFTFTDYFMTWVRQPPGKALEWLGFIRNKPNGYTTEYNPSVKGRFTISRDNSQGILYLQMNTLRAEDSAIYYCARDYSGYFGFWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1721 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12019:3587 (reversed)", "sequence" : "TTGTGAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGACTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGGCTTTATTACTACGGTAGTAGCTCAAACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCCTGCTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 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"CCTGGACGTGAAGTTGGTGGAGTCTGGACCTGAGGTGGTAAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGCCTACTACATTCACTGGGTGAAGCAAAGTCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTAGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAAAGTCCTCCAGCAGAGCCTACATGGAGGTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGATCACCCCCTGGGGTTTTCTTATTGGGGCCTAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCTGCTTATCCCCTGGGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33, 38, 38, 38, 38, 38, 36, 34, 32, 36, 32, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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36, 39, 36, 36, 36, 36, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 34, 33, 33, 33, 32, 32, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGPEVVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"value" : "KYNETFKGKATLTSDKSSSTAYMDLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTVTS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"DVKLQESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWMGYISYDGSNNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCASYFYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1738 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21378:3602 (reversed)", "sequence" : "GCTAGAGGTGCAGCTTCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTAAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACCAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACCCAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCAAAAACGACACCCCCATCGGTTCATCCCCTGCTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 33, 33, 37, 37, 37, 33, 37, 33, 38, 38, 38, 38, 38, 38, 37, 37, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 36, 38, 34, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 39, 36, 39, 39, 38, 38, 38, 38, 38, 39, 18, 37, 39, 37, 18, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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37, 39, 37, 37, 33, 39, 38, 32, 36, 36, 39, 36, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 38, 38, 34, 15, 38, 33, 37, 37, 37, 15, 37, 38, 38, 38, 32, 14, 38, 37, 37, 32, 36, 34, 38, 34, 36, 34, 37, 39, 36, 36, 36, 36, 36, 37, 38, 37, 34, 32, 32, 32, 35, 35, 32, 37, 37, 32, 29, 16, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPKQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNPAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPKQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNPAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1739 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22406:3603 (reversed)", "sequence" : "AATGGAGGTGAAGCTTCAGGAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGGTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 33, 37, 37, 31, 33, 33, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGDDLVKPGASVKLSCKASGYTFTSYWINWIKQRPGQGLEWIGRIPPGSGTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARGSYYYGSSSPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1741 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20287:3606 (reversed)", "sequence" : "TTCACAGGTCCAACTGCAGCAGCCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTATATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGGAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATACAGCCTACCTGCACCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTCCTGTGCTCATGATGCCCCTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCTCATCCCTTGCGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 35, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"TGGTGAGGTGCAGCTTCAGCAGTCTGGGTCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCGCAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAGACCCTCTTTTTACTACGGTAGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 37, 37, 33, 37, 37, 37, 38, 38, 38, 38, 35, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 38, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 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39, 38, 38, 38, 37, 38, 38, 39, 37, 38, 38, 33, 38, 38, 38, 38, 38, 36, 33, 32, 33, 33, 33, 37, 37, 33, 32, 32, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVKPGASVKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYHLSVKGRFTIYRDNSQSILYLQMNTLRAEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRTKANGYTK" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", 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"CGTGCAGGTCCACGTGAAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGTCAGGGTCTAGAATGGATTGGTGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAATGGTTACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCTTATCCACTGGCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 33, 37, 37, 37, 37, 37, 37, 38, 34, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 33, 37, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 39, 39, 39, 30, 33, 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37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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38, 38, 35, 38, 36, 34, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRLRAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRLRAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1841 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22584:3666 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLRNLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DSTFDYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DS" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062147" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKLSCKASGYTFTGYWMQWVKQRPGQGLEWIGIIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLRNLASEDSAVYYCARVFYDSTSAYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1640 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39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 33, 38, 37, 37, 38, 38, 37, 37, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 36, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 38, 39, 38, 38, 38, 37, 36, 38, 39, 38, 39, 39, 38, 39, 39, 37, 32, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 36, 36, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMDPGDVWGQGTTVTVSS" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062276" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARDTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1761 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22568:3618 (reversed)", "sequence" : "GGACGAAGTGATGTTGGTGGAGTCTGCGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCACTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAGGAGGCTGGAGTGGGTCGCAATCATTAATAGTGATGGTCGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTATTGTGCAAGACAGGGGGTTATTACTACGATAGTATCCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTTCATCCCTTGCAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 35, 37, 38, 38, 38, 36, 37, 38, 34, 38, 39, 39, 39, 39, 34, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 35, 35, 39, 38, 38, 38, 39, 39, 38, 32, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 37, 39, 38, 39, 39, 38, 37, 39, 37, 37, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 37, 39, 38, 39, 37, 39, 39, 37, 39, 39, 38, 38, 39, 38, 38, 38, 37, 38, 37, 38, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 33, 34, 33, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 38, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 38, 39, 38, 37, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 37, 39, 39, 39, 38, 38, 37, 38, 36, 33, 35, 34, 37, 38, 39, 39, 36, 32, 38, 38, 38, 37, 38, 39, 38, 37, 38, 37, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 34, 36, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESAGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPERRLEWVAI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSHYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSDGRYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQGVITTIVSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 371, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYDSTYSYWYFDVWGAGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYDSTY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESAGDLVKPGGSLKLSCAASGFTFSHYAMSWVRQTPERRLEWVAIINSDGRYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARQGVITTIVSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1762 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11859:3619 (reversed)", "sequence" : "TACGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCAGTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCCGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGGATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 31, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVKLSCTASGFNIKDYYMHWVKQRPEQGLEWIGWIDPENGDTEYAPKFQGKATMTADTSSNTAYLQLSSLTSEDTAVYYCNARGDYDFDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1765 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14534:3621 (reversed)", "sequence" : "ACTGGAGGTGAAGCTGGTGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTGTTACTGTGCAAGAGATAGAACTACGGCTACTCTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCAAAAACAACACCCCCATCTGCCTATCCACTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATCYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRTTATLYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATCYCARDRTTATLYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1766 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18617:3622 (reversed)", "sequence" : "AAATGAGGTGAAGCTGGTGGAATCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCCCATCCCTTGAGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 34, 32, 37, 30, 38, 37, 39, 39, 39, 39, 39, 34, 39, 38, 39, 38, 38, 37, 39, 38, 39, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARETVRGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"M19894; J03832" }, { "name" : "Source-Mismatches", "value" : "21" }, { "name" : "Source-Identity", "value" : "92.83%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", 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"GTACGAGGTCCAGCTGCAACAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTCATCCACTGTCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 34, 37, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 37, 37, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 39, 37, 37, 37, 39, 39, 38, 38, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 37, 38, 37, 37, 38, 37, 39, 39, 39, 37, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 37, 39, 38, 37, 38, 38, 37, 37, 39, 38, 38, 39, 38, 37, 37, 37, 38, 36, 37, 39, 39, 39, 39, 33, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 34, 39, 39, 38, 39, 39, 39, 36, 39, 39, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 38, 38, 38, 38, 36, 38, 17, 37, 38, 38, 36, 17, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTAVNVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFGRYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTAVNVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGANYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARFGRYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1785 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17908:3632 (reversed)", "sequence" : "CTGTGAGGTCCAACTGCAACAGTCTGGCTCAGGGCACGATGCTTCTTGGCTCGGGTCTCAGCTTTCCTGATGTTTATCAGGACTTTGTGGTATTCCGCGGGTAGCAGACCCTTCACCAACTCGAATCCAAACTTGCGGGTGAACTTGATGAACAGGTTCCGAAGCTTCATCCGGAAGTGCCGTCGCATGTCATCTGACAACTTCCCAATGGCTTCCATCACTAGCTGCACATGCTTAGCAAGGTGCACCACGTCCATGACCACCACAGCAACCTTGATGAAGCCTAGCGCGGACTTGACCACATCACGGGTTCGAGAGGCCAGCAGCAGGCACACGTTCTCCAGGAGCTGCTCCACTGTGCTGGTCCCCATCGGCCCATCCCTTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 38, 36, 36, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 35, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 37, 39, 39, 37, 37, 35, 38, 38, 38, 35, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 37, 38, 38, 37, 38, 37, 37, 38, 33, 33, 37, 38, 38, 38, 38, 38, 36, 38, 37, 37, 39, 38, 37, 36, 39, 38, 33, 39, 39, 39, 38, 38, 37, 38, 37, 37, 38, 38, 37, 38, 37, 37, 39, 39, 37, 34, 34, 38, 37, 37, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 37, 27, 14, 35, 37, 30, 16, 16, 16, 33, 35, 36, 35, 38, 38, 36, 39, 38, 38, 39, 39, 38, 37, 37, 39, 39, 38, 35, 35, 33, 37, 39, 39, 37, 38, 39, 38, 37, 36, 38, 34, 38, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 37, 16, 30, 38, 38, 34, 37, 39, 39, 36, 37, 38, 32, 36, 36, 36, 37, 37, 37, 39, 37, 39, 37, 39, 39, 38, 39, 36, 39, 39, 39, 38, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 33, 39, 39, 37, 37, 39, 37, 37, 36, 34, 38, 38, 38, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 250, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WCTLLSMCS**WKPLGSCQMTCDGT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 101, "max" : 115, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 1, "max" : 79, "direction" : "Left", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 100, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "PRNTTKS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1786 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13614:3632 (reversed)", "sequence" : "GGCTGAGGTGCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTACCTACTGGATACACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTAATACTGAGTACAATCAGAAGTTCAGGGACAGGGCCACATTGACTGCAGACAAATCCTCCAGCACACCCTACATGCAACTGAGCAGCCTGACCTCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATTACGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCCTTGTCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 37, 37, 32, 37, 32, 37, 37, 38, 38, 38, 33, 38, 38, 38, 38, 38, 38, 39, 39, 39, 35, 38, 34, 32, 36, 38, 38, 32, 35, 38, 39, 39, 39, 38, 37, 39, 39, 38, 39, 38, 39, 39, 32, 14, 30, 36, 36, 37, 39, 16, 32, 35, 37, 32, 39, 37, 39, 39, 33, 35, 38, 39, 39, 39, 38, 34, 38, 38, 37, 36, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 36, 37, 35, 31, 38, 37, 39, 37, 15, 37, 37, 15, 33, 33, 31, 33, 37, 35, 34, 37, 37, 39, 39, 39, 39, 34, 38, 39, 36, 38, 39, 36, 37, 37, 15, 37, 36, 14, 33, 36, 34, 38, 37, 16, 37, 36, 37, 39, 39, 39, 39, 39, 33, 16, 38, 39, 39, 33, 38, 35, 38, 36, 37, 37, 39, 39, 37, 39, 39, 39, 37, 37, 39, 38, 37, 35, 38, 39, 39, 37, 37, 38, 39, 39, 39, 36, 39, 33, 37, 33, 35, 37, 38, 38, 39, 39, 39, 39, 36, 39, 39, 39, 36, 37, 22, 37, 38, 38, 39, 37, 38, 38, 38, 37, 36, 36, 36, 36, 37, 37, 37, 38, 37, 39, 38, 34, 38, 37, 38, 37, 39, 39, 38, 37, 38, 39, 38, 39, 38, 37, 37, 34, 34, 37, 38, 36, 37, 31, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 37, 38, 39, 38, 37, 38, 37, 39, 38, 34, 36, 39, 39, 37, 37, 37, 37, 16, 39, 39, 36, 38, 33, 37, 38, 33, 37, 37, 38, 33, 37, 17, 38, 17, 37, 15, 16, 37, 39, 33, 37, 35, 16, 36, 38, 38, 37, 14, 14, 34, 38, 30, 39, 39, 39, 38, 39, 37, 29, 29, 29, 14, 14, 36, 38, 36, 33, 33, 15, 29, 14, 29, 14, 36, 31, 38, 36, 36, 34, 38, 33, 15, 16, 16, 36, 36, 38, 36, 29, 37, 16, 14, 38, 36, 14, 38, 37, 39, 38, 39, 38, 38, 32, 34, 38, 38, 14, 38, 39, 37, 39, 39, 37, 30, 36, 32, 36, 34, 38, 39, 38, 37, 38, 38, 36, 38, 37, 16, 35, 33, 37, 32, 32, 32, 37, 37, 37, 32, 16, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTTYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFRDRATLTADKSSSTPYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGLRDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : 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"GCGTCAGGTCCAACTGCAGCAGCCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATCTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTCATCCACTGATTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 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37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVRPGTAVNVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTRVTGAA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDYSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "55" }, { "name" : "Source-Identity", "value" : "81.23%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" 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"CTTGGAGGTGCAGCTTCAGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACGTTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGACCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGATTACTACGGTAGTCCCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCACTGAATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 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38, 39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 37, 38, 39, 39, 38, 39, 39, 38, 34, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 37, 38, 38, 38, 38, 38, 38, 33, 36, 32, 31, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : 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"TCATCAGGTGCAGCTGAAGGAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTGGCTACTGGATGCAGTGGGTTAAACAGAGGCCTGGCCAGGGTCTGGAATGGATTGGGATTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCGTCCAGCACAGCCTACATGCAACTCAGGAACTTGGCAGCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGTTGTCTACGAGAGTACCTCTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCCCAGCCAAAACAACACCCCCATCAGCTAATCCACTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 16, 37, 37, 33, 37, 16, 16, 38, 38, 33, 16, 33, 37, 33, 33, 37, 39, 39, 38, 39, 39, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 15, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 37, 38, 39, 38, 39, 33, 35, 39, 39, 39, 39, 38, 39, 39, 39, 39, 15, 16, 33, 37, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 37, 38, 39, 39, 16, 37, 39, 39, 38, 38, 39, 37, 39, 39, 33, 37, 38, 38, 33, 38, 36, 37, 39, 37, 37, 39, 38, 38, 39, 39, 17, 38, 37, 38, 34, 38, 37, 38, 38, 39, 36, 38, 38, 39, 36, 37, 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"QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } 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"0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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38, 37, 38, 34, 32, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMDPGDVWGQGTTVTVSS" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062276" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARDTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1717 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21716:3581 (reversed)", "sequence" : "ATGACAGGTCCAACTGCAGCAGCCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCACTGGTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 33, 37, 16, 35, 31, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 36, 37, 39, 38, 38, 39, 39, 38, 39, 35, 35, 38, 39, 38, 38, 37, 37, 36, 37, 36, 37, 39, 38, 37, 39, 39, 16, 32, 35, 37, 37, 32, 37, 39, 39, 39, 38, 39, 15, 33, 37, 37, 39, 39, 39, 39, 39, 39, 36, 33, 38, 38, 39, 37, 39, 39, 37, 39, 39, 17, 38, 38, 38, 16, 38, 39, 38, 37, 36, 35, 38, 36, 39, 39, 39, 33, 38, 38, 39, 39, 38, 39, 38, 14, 35, 35, 38, 16, 37, 37, 38, 39, 39, 39, 38, 39, 39, 27, 33, 33, 37, 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37, 37, 37, 37, 37, 32, 19, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1718 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14285:3583 (reversed)", "sequence" : "TCAACAGGTTCAGCTGCAGCAGTCTGGGGCAGCGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTTTGCTAATTATTACTACGGTAGTCACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCATTGGAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 37, 34, 38, 38, 37, 38, 39, 37, 35, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 37, 39, 39, 37, 36, 37, 38, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 34, 38, 37, 37, 38, 37, 37, 36, 38, 37, 36, 36, 37, 38, 39, 39, 39, 36, 36, 39, 38, 39, 34, 37, 34, 38, 39, 38, 38, 38, 38, 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38, 38, 38, 38, 34, 38, 37, 34, 37, 37, 37, 20, 37, 32, 18, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAALVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYF" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ANYYYGSHFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAALVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYFANYYYGSHFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1719 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10823:3586 (reversed)", "sequence" : "CTGGCAGGTGCAGCTGAAGGAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCGACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCCTTAACTAACCGGGACATTGGGGGCCCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTCATCCATTGAATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 37, 39, 37, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 30, 37, 38, 39, 39, 38, 38, 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"TAACGAGGTGCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCTTCACTAACTACTGGATAGGTTGGGTAGCGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTAATTGTGGAGGTGGTTATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGGCACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCACTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 32, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 37, 33, 38, 37, 38, 39, 37, 37, 39, 38, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 33, 36, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 34, 37, 39, 39, 39, 37, 38, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 37, 39, 37, 39, 39, 37, 39, 39, 39, 37, 39, 39, 19, 33, 37, 36, 38, 37, 37, 36, 37, 38, 38, 38, 38, 30, 38, 34, 36, 38, 39, 38, 39, 38, 37, 39, 38, 35, 37, 37, 38, 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKMSCKAAGYTFTNYWIGWVKQRPGHGLEWIGDIYPGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYCARSYGSSSYDTDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1924 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19855:3743 (reversed)", "sequence" : "GACACAGGTTCAGCTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGGAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTGACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCACTGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPDNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" 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"name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVEMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPDNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1925 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13344:3744 (reversed)", "sequence" : "CGGGCAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCTGGTAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARAITDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1926 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21856:3745 (reversed)", "sequence" : "GCCCGAGGTCCAGCTGCAACAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTACAGTGAAGATGTCTTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGAGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 37, 36, 37, 38, 37, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 35, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 39, 37, 16, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 37, 39, 39, 39, 33, 39, 37, 39, 39, 39, 39, 39, 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: "ERR346596.1932 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12187:3750 (reversed)", "sequence" : "AGGGCAGGTCCAGCTGCAGCAGTCTGACGCTGAGTTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGAAGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTATGCAGTGTATTTCTGTAAAAGATCTAATGGTAACTACTATGCTATGGACGACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCACTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 32, 32, 16, 32, 32, 35, 37, 16, 35, 37, 38, 38, 38, 37, 37, 38, 38, 38, 38, 38, 39, 39, 38, 39, 33, 35, 15, 36, 36, 37, 34, 37, 16, 37, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 36, 36, 38, 38, 39, 39, 16, 37, 38, 39, 33, 32, 38, 39, 38, 38, 38, 39, 39, 39, 39, 16, 38, 39, 16, 37, 14, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 33, 38, 39, 39, 39, 39, 39, 39, 38, 37, 15, 37, 37, 16, 16, 33, 17, 38, 33, 17, 17, 16, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDHA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLNSLTSEDYAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISPGNGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KRSNGNYYAMDD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQKPEQGLEWIGYISPGNGDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDYAVYFCKRSNGNYYAMDDWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1933 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14324:3750 (reversed)", "sequence" : "TACGGAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGGGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 29, 29, 32, 32, 35, 32, 37, 37, 37, 37, 38, 38, 33, 38, 38, 34, 38, 38, 38, 38, 39, 39, 33, 37, 34, 36, 36, 38, 38, 34, 38, 38, 38, 39, 39, 38, 38, 35, 39, 39, 38, 39, 37, 39, 38, 38, 15, 37, 15, 35, 38, 38, 39, 17, 32, 35, 39, 38, 39, 39, 37, 37, 39, 36, 38, 37, 38, 39, 39, 39, 32, 14, 38, 37, 36, 39, 37, 37, 39, 39, 39, 37, 37, 38, 15, 15, 31, 38, 37, 31, 38, 33, 32, 38, 39, 39, 39, 39, 16, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 33, 38, 32, 32, 35, 32, 29, 16, 32, 29, 16, 16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGSSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQGPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPRFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" 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364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPRFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1941 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11078:3756 (reversed)", "sequence" : "AGAACAGGTTCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCTTCACAGACCCTGTCCATCACTTGCACTGTCTCTGGTTTTTCATTCACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAAACTGAGCATCAGCAAAGAAAACACCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTATTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTTATCCATTGTTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 29, 16, 16, 33, 37, 30, 37, 37, 37, 37, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.47%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGVYYGNPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1947 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"gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATITSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARRRVYDYDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1950 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11300:3767 (reversed)", "sequence" : "ATGGCAGGTCCAACTACAGCAGCCTGGAGCTGAGCTGGCGAGGCCCGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGACTGGAAAGGGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAGATCAGGTGATGGTTACCCCAGGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCACTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 37, 33, 37, 37, 38, 38, 38, 16, 37, 37, 38, 38, 38, 32, 15, 37, 38, 39, 39, 37, 38, 38, 34, 38, 16, 32, 38, 39, 39, 39, 38, 36, 14, 36, 36, 36, 38, 38, 14, 36, 36, 36, 34, 36, 38, 37, 16, 16, 35, 38, 16, 37, 37, 33, 37, 16, 37, 33, 39, 35, 37, 36, 34, 38, 37, 37, 36, 16, 37, 15, 16, 16, 37, 16, 15, 33, 34, 35, 38, 39, 36, 39, 36, 16, 36, 37, 38, 16, 37, 35, 16, 27, 37, 35, 37, 37, 38, 35, 38, 37, 35, 37, 37, 39, 39, 27, 32, 30, 37, 16, 33, 37, 38, 33, 38, 38, 15, 38, 36, 39, 39, 15, 16, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRTGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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32, 38, 38, 37, 37, 38, 33, 37, 32, 32, 37, 37, 33, 37, 32, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNFITHW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQRSDLAAEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { 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"TGTGGAGGTGCAGCTGGTGGAGTCTGGAGCTGACCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACAGATTCAATAGTTATTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAATTTCAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCGTATACATCCTCCAACACAGCCTACATGCAAATCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGGCTCGGAATACGGAGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCCCATCCCTTGGGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 37, 38, 36, 38, 38, 38, 39, 39, 39, 39, 34, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 18, 37, 39, 39, 36, 37, 37, 19, 31, 37, 33, 38, 39, 39, 37, 38, 39, 38, 39, 37, 34, 35, 38, 33, 37, 37, 39, 29, 36, 37, 37, 39, 37, 37, 37, 37, 38, 37, 36, 37, 38, 37, 36, 37, 38, 37, 36, 39, 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"CAAGCAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGGCTACGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 35, 38, 38, 38, 38, 25, 38, 38, 38, 39, 39, 39, 39, 37, 37, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 33, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 36, 39, 15, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 33, 39, 38, 39, 39, 38, 38, 37, 37, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 38, 39, 37, 33, 37, 37, 39, 38, 38, 37, 27, 36, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 35, 37, 37, 38, 37, 17, 35, 37, 38, 37, 16, 38, 14, 34, 31, 34, 35, 37, 18, 38, 18, 37, 38, 33, 39, 38, 39, 37, 18, 18, 33, 37, 38, 39, 39, 36, 38, 39, 38, 37, 39, 39, 39, 39, 39, 37, 38, 38, 38, 36, 36, 34, 38, 38, 39, 38, 38, 36, 38, 39, 38, 33, 37, 36, 37, 35, 33, 38, 37, 30, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 16, 39, 38, 38, 35, 38, 39, 39, 39, 36, 38, 39, 39, 38, 39, 36, 38, 38, 39, 38, 36, 34, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 37, 34, 37, 32, 32, 33, 33, 37, 37, 37, 32, 32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRLRAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRLRAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2004 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10314:3803 (reversed)", "sequence" : "TACCGATGTGCACCTGGTGGAGTCTGGGGGAGACTTAGTGGAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGGTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTAACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACACCAGAGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 34, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 36, 37, 38, 38, 38, 38, 37, 38, 38, 37, 37, 38, 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38, 38, 37, 37, 38, 37, 32, 32, 33, 33, 33, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGDLVEPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWGRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHQRYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGDLVEPGGSLKLSCAASGFTFSSYGMSWGRQTPDKRLEWVATISSGGSNTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHQRYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2005 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18831:3803 (reversed)", "sequence" : "ATAACAGGTTCAGCTCCAGCAATCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTCACTACTGGATAGAGTGGGTAAAACAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAACTGGTAGTACTAAATACAATGAGAAGTTCAAGGGCAAGGCCACAATCACTGCAGACACATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAAGACTCTGCCGTCTATTACTGTACAAGATCCCTACGGCGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCTTGTAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 18, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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{ "sequence" : { "name" : "ERR346596.1813 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14147:3647 (reversed)", "sequence" : "GAGAGAGGTGCAGCTTCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAGGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGGTTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGTGAGGAACTGGGCCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGAGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 34, 34, 34, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 39, 38, 39, 38, 38, 36, 36, 38, 38, 39, 37, 38, 38, 37, 38, 38, 38, 38, 37, 34, 33, 32, 31, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGSSVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVRNWADY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGSSVRISCKASGYAFSSYWMNWVKQRPGQGLEWIGQVYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARVRNWADYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1814 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14243:3648 (reversed)", "sequence" : "GATCGAGGTCCAGCTGCAACAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCTTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCCCTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 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38, 38, 38, 37, 38, 38, 38, 38, 37, 34, 32, 30, 33, 37, 37, 37, 37, 32, 32, 33, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDLANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1815 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17029:3650 (reversed)", "sequence" : "GTAAGAGGTGAAGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGATATTACTACGGCTTCCTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCATTGGGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 37, 37, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 36, 38, 39, 39, 36, 37, 38, 39, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", 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"type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYC" } ] 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"name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKTGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGYISCYNGATSYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYCARSCGAYGYDGGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1820 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12972:3654 (reversed)", "sequence" : "GCGGGAAGTGAAGCTGGTGGAGTCTGGAGGCGGCTTGGTACAGACTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACCTGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGCGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCATTGATCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 16, 32, 16, 32, 37, 37, 37, 37, 16, 33, 38, 16, 33, 15, 37, 15, 37, 38, 37, 38, 37, 18, 15, 33, 15, 15, 15, 32, 14, 36, 36, 34, 14, 14, 32, 33, 17, 16, 17, 16, 33, 37, 39, 39, 39, 14, 36, 29, 29, 29, 33, 38, 37, 39, 39, 37, 38, 16, 37, 38, 35, 38, 15, 16, 37, 38, 39, 16, 17, 33, 16, 15, 33, 38, 37, 16, 37, 37, 37, 37, 39, 39, 16, 16, 33, 37, 16, 33, 16, 33, 16, 16, 33, 37, 37, 16, 33, 36, 38, 15, 37, 35, 15, 15, 16, 33, 16, 15, 27, 33, 15, 14, 29, 33, 14, 27, 14, 27, 34, 15, 37, 37, 38, 34, 15, 14, 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38, 36, 32, 38, 39, 38, 37, 38, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 31, 37, 29, 16, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQTGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "LSWVRQPPGKALAWLAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQTGGSLRLSCATSGFTFTDYYLSWVRQPPGKALAWLAFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDGSSFYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1821 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22630:3654 (reversed)", "sequence" : "ACAGCAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTACGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 33, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 177, "max" : 290, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQFFFKMNRLQTDEAAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 176, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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"name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKASGYSFTSYWINWIKQRPGQGLEWIGRIAPGSDTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARFPLYYGSSFYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1962 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16294:3776 (reversed)", "sequence" : "ACGAGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCATTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 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34, 39, 39, 39, 38, 39, 37, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDISWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1966 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8503:3778 (reversed)", "sequence" : "TGCTCAGGTCCAACTGCAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATGTGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCGAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCACCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAATGCATGGGGGGACGACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCTATCCCTTGGGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 37, 38, 37, 33, 38, 38, 38, 38, 38, 36, 37, 38, 37, 38, 39, 38, 38, 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37, 17, 37, 39, 39, 39, 39, 38, 33, 36, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 37, 37, 38, 38, 38, 37, 36, 38, 32, 37, 37, 39, 39, 39, 37, 33, 38, 37, 37, 36, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 34, 38, 39, 39, 39, 37, 38, 36, 38, 36, 36, 16, 38, 37, 38, 39, 36, 37, 16, 35, 39, 38, 36, 16, 38, 38, 38, 38, 38, 34, 38, 38, 38, 36, 36, 36, 36, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 32, 32, 31, 33, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYAPKFQGEATMTADTSSNTAYLHLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPENGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NAWGDDDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.18%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : 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"name" : "translation", "value" : "QVQLQQSGAELVRSGASVRLSCTASGFNIKDYYVHWVKQRPEQGLEWIGWIDPENGDTEYAPKFQGEATMTADTSSNTAYLHLSSLTSEDTAVYYCNAWGDDDYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1967 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10659:3780 (reversed)", "sequence" : "TAGGGAGGTCCAGCTGCAACAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGCGGTTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCCATCCCTTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 31, 33, 33, 37, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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36, 37, 34, 32, 30, 30, 33, 33, 35, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"GGTTCAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCGAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATCTACTATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCCCTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 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38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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(292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : 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37, 33, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTVYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAFYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INLYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRVTT*LDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "LDYWGQGTSVNVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M24786" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTVYYMHWVKQSHVKSLEWIGRINLYNGATTYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAFYYCARRVTT*LDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1846 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18943:3676 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"DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : 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"sequence" : { "name" : "ERR346596.1851 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16532:3684 (reversed)", "sequence" : "GGGGGAGGTCCAGCTGCAACAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTTATCCTGGAAATGGTGATACTAGCTACAACCAGAAGTTCAAGGACAAGGCCAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAGAAGAAGCGATTATGGAAAAAAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCCGCCAAAACAACACCCCCATCTGTCTATCCCTTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 38, 33, 37, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 38, 39, 38, 37, 38, 39, 37, 39, 39, 39, 37, 39, 39, 37, 38, 38, 39, 16, 37, 37, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 38, 39, 39, 25, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 25, 39, 37, 37, 38, 39, 37, 38, 38, 37, 38, 37, 38, 37, 38, 37, 38, 38, 37, 38, 39, 37, 36, 38, 38, 38, 39, 38, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 37, 35, 38, 37, 37, 39, 38, 39, 39, 37, 39, 39, 37, 39, 38, 39, 36, 38, 39, 36, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 36, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 38, 39, 37, 38, 36, 34, 34, 37, 34, 36, 37, 34, 38, 38, 38, 38, 39, 38, 32, 39, 39, 39, 38, 39, 37, 38, 36, 36, 38, 36, 38, 36, 38, 38, 38, 38, 38, 37, 37, 34, 19, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKDKAKLTAVTPAITAYMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYPGNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRSDYGKKAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.17%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 284, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKASGYSFTSYWMHWVKQRPGQGLEWIGAFYPGNGDTSYNQKFKDKAKLTAVTPAITAYMELSSLTNEDSAVYYCTRRSDYGKKAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1852 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13269:3686 (reversed)", "sequence" : "TTTGGATGTGCAACTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCACTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTTCACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGAGCAGTCTGAAGACTGAGGACACAGCCATGTATTACTGTGTAAGTCCTCATTACCACGGTAGTAGTCCCTGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCATTGATCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 34, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 39, 34, 36, 38, 14, 36, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 37, 34, 38, 38, 38, 39, 38, 38, 38, 34, 37, 37, 38, 39, 38, 39, 39, 37, 39, 27, 37, 37, 37, 37, 38, 39, 38, 38, 37, 37, 37, 38, 39, 39, 37, 39, 37, 37, 39, 38, 37, 39, 39, 39, 39, 37, 37, 34, 37, 37, 38, 37, 38, 38, 38, 38, 38, 33, 37, 38, 37, 34, 30, 37, 33, 38, 37, 38, 38, 37, 38, 37, 38, 38, 37, 37, 37, 38, 39, 39, 39, 39, 37, 39, 39, 37, 38, 37, 37, 38, 39, 39, 37, 37, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 37, 37, 37, 37, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 37, 39, 36, 36, 30, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 36, 38, 38, 38, 39, 37, 36, 36, 38, 35, 38, 38, 39, 36, 33, 38, 38, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 36, 38, 36, 36, 38, 38, 39, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLFLQMSSLKTEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSFT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSPHYHGSSPWWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSFTYYPDSVKGRFTISRDNAKNTLFLQMSSLKTEDTAMYYCVSPHYHGSSPWWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1854 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19351:3690 (reversed)", "sequence" : "TGGGGAGGTGATGTTGGTGGAGTCTGGAGCTGGGCTGGTGGAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAGTCGTATGGTAACTATTTGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCTATCCCCTGCCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 37, 37, 38, 21, 33, 38, 38, 32, 37, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 39, 18, 32, 37, 36, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 17, 38, 39, 39, 39, 39, 39, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 31, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAGLVEPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHESYGNYLYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "55" }, { "name" : "Source-Identity", "value" : "81.23%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAGLVEPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHESYGNYLYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1855 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22469:3690 (reversed)", "sequence" : "GGGCGAGGTCCAACTGCAACAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATATAGGTACGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTTATCCATTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 31, 33, 37, 37, 37, 37, 38, 38, 34, 38, 38, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 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39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 34, 37, 33, 34, 34, 34, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYRYDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARYRYDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1856 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23275:3691 (reversed)", "sequence" : "CCCCGAAGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAATGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTACAAGATCGGGGACATTAGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCACTGTAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 37, 37, 37, 37, 38, 38, 38, 38, 36, 37, 36, 38, 37, 39, 39, 39, 37, 39, 39, 38, 37, 34, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 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"TCGTGAGGTCCAGCTTCAGCAGTCTGGAGCTGAACTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAATGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTACTTTGACGACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCTTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 32, 37, 37, 37, 37, 37, 19, 37, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 38, 37, 39, 38, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 36, 37, 36, 38, 39, 39, 39, 37, 39, 39, 37, 39, 35, 37, 39, 38, 39, 39, 39, 39, 39, 38, 37, 36, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 38, 39, 33, 38, 38, 39, 38, 39, 39, 38, 36, 38, 38, 39, 36, 38, 33, 38, 33, 37, 39, 39, 38, 39, 38, 39, 33, 31, 38, 39, 37, 38, 39, 39, 36, 38, 38, 39, 38, 38, 38, 39, 39, 37, 14, 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16, 30, 32, 32, 29, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDDWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1861 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10228:3696 (reversed)", "sequence" : "AACGGAGGTGCAGGTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACATTGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTATTGTGCAAGAGATCGTGGGGTACAGGGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCCTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 32, 32, 32, 32, 32, 32, 35, 32, 16, 34, 16, 37, 38, 37, 32, 37, 37, 38, 38, 34, 15, 33, 38, 38, 39, 38, 39, 38, 36, 36, 36, 36, 37, 39, 39, 39, 35, 36, 37, 39, 39, 38, 37, 37, 39, 39, 38, 37, 37, 30, 34, 36, 15, 37, 33, 35, 39, 37, 39, 39, 37, 39, 37, 39, 38, 38, 38, 39, 39, 36, 37, 31, 16, 34, 32, 38, 38, 39, 39, 39, 37, 39, 37, 38, 36, 38, 37, 39, 39, 39, 17, 31, 38, 37, 33, 16, 36, 37, 37, 38, 38, 39, 37, 37, 37, 39, 33, 37, 39, 38, 37, 39, 38, 38, 39, 30, 36, 30, 27, 27, 37, 37, 38, 37, 39, 34, 34, 30, 33, 31, 37, 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37, 38, 38, 37, 38, 37, 34, 33, 32, 33, 33, 35, 32, 32, 32, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDIAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VQPYRSIDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "VQ" }, { "name" : "IMGT_allele", "value" : "IGHD6-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-13" }, { "name" : "Source-Sequence", "value" : "AF062245" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDIAKNNLYLQMSSLKSEDTAMYYCARDRGVQGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1863 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12478:3698 (reversed)", "sequence" : 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}, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVSGLSLTDYVISWIRQPPGKGLE*LGIIWGGGSTYYNPALKSRLTISKDNSRSQVFLKMNSLQTDDTAMYYCAKQYGNSDWYFDVWGAGTTVAVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1867 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8843:3703 (reversed)", "sequence" : "AGAGGAAGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGGGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGAACTACGGCTACCCTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGACCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 37, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 32, 37, 36, 38, 38, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 32, 37, 38, 39, 33, 36, 38, 38, 39, 38, 38, 38, 36, 36, 39, 39, 37, 39, 39, 35, 38, 39, 39, 39, 39, 39, 38, 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"name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MSWVRQPPGKALGWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRTTATLYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" 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39, 39, 37, 37, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 37, 39, 38, 39, 39, 37, 36, 38, 37, 38, 39, 38, 38, 39, 39, 38, 37, 38, 38, 37, 33, 36, 39, 38, 36, 32, 38, 38, 39, 37, 36, 38, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVTLKESGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSNGKNLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDSN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYSQKFKGKATLTVDKSSSTAYMQLRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKKDYGSSSFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : 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"codon_start", "value" : "3" }, { "name" : "translation", "value" : "Y" }, { "name" : "IMGT_allele", "value" : "IGHD4-17*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-17" }, { "name" : "Source-Sequence", "value" : "AF062249" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMNWVRQSPEQGLEWIGKIDPANGTNNYDPKFKGKATITAETYSNTAYLQLSSMTSDDAAVYYCAG*YDDTSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1874 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19996:3710 (reversed)", "sequence" : "TATAGAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGGTACACATTCACTAGCTATGTTATTCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATCAATCCTTACAATGATGCCACTAAGTTCAATGAGAGGTTCAAAGGCAAGGCCACACTGACTTCAGACGAATCCTCCAGCACAGCCTACATGGTGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGGGTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTTATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 35, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 37, 39, 39, 39, 39, 36, 36, 39, 39, 38, 38, 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33, 35, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KFNERFKGKATLTSDESSSTAYMVLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPYNDAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVIHWVKQKPGQGLEWIGYINPYNDATKFNERFKGKATLTSDESSSTAYMVLSSLTSEDSAVYYCAREGVDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1875 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19085:3710 (reversed)", "sequence" : "TAAAGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGATAACTATGGCGTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCCTATCCCTTGTCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 31, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 32, 35, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 34, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 39, 31, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 290, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 318, "max" : 350, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 291, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDNYGVAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 296, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 350, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 350, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] } ] }, { "sequence" : { "name" : "ERR346596.1876 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8437:3711 (reversed)", 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"IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 312, "direction" : "Right", 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"sequence" : "TGGGGAGGTGCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAACTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCTTAGCACTGGTTATACTGAGTACAATCAGAAGTTCACGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACGGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCCAGAGATGATTACGACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCCCTGTCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 18, 32, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 32, 17, 37, 38, 17, 37, 37, 39, 39, 39, 38, 38, 38, 32, 37, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 35, 39, 35, 39, 39, 39, 39, 39, 33, 34, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 35, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 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29, 32, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFTDKATLTADKSSSTAYMQRSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INLSTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 77, "max" : 100, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 152, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNSDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TNGYDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.52%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : 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"QVLQQSGTVLARPGASVKMSCKASGYSFTSYWMHWVKQRPGQGLEWIGAIYPGNSDTSYNQKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYCTNGYDYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2083 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13002:3865 (reversed)", "sequence" : "ACGTGAGGTAAAGCTTCAGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACGTTCACCAGCTACTGGATGAACTGGGTTAAGCAGAGGCCTGAGCAAGGCCTTGAGTGGATTGGAGGGATTGATCCTTACGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCATATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGACGCACGAATTATGATGGTTACTACGTCCCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCCCCGTCTCCTCAGCCAAAACGACACCCCCATCACCCCATCCCCTGAACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 33, 34, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 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"name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSDLKSRLSISKANSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.15%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 295, "max" : 301, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGSTYYNSDLKSRLSISKANSKSQVFLKMNSLQTDDTAMYYCAKRGGLGPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2086 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11430:3869 (reversed)", "sequence" : "ACTGGATGTGCAGCTTCAGGAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTTAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGATTGGTAATACTTTATATGACCCGAAGTTCCAGGGCAAGGCCAGTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATTGTTTGGGACGAGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGTCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 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"DVQLQESGAELVRPGALVKLSCKASGFNIKDYFMHWVKQRPEQGLEWIGWIDPEIGNTLYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARLFGTRDFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2087 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23327:3870 (reversed)", "sequence" : "CGGCGAGGTACAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGTAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTTATCCATTGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 33, 34, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 17, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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"name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WEPLNWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WEP" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "X80305" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVRPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIDPSNSESRLNQKFKDKATLNVDKSSNTAYMQLSSLTSEDSAVYYCARNHYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2094 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18960:3878 (reversed)", "sequence" : "TCTAGAGGTCCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTACCTATTACTACGGTAGTAGCTGGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATYYYGSSWGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATYYYGSSWGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1890 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21738:3720 (reversed)", "sequence" : "CATCGAGGTGCAGGGGGTGGAGTCTGGAGGAGGCTTGGTACATCCTGGGGGTTCTCTGAGACTCTCCTGTTCAACTTCTGGGTTCACCTTCACTGATCACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGTATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATGTGGGGTCTGGTATGGGACTCTGGTTCTACGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCGGCCAAAACGACACCCCCATCAGTCTATCCATTGATAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 34, 32, 33, 33, 33, 37, 37, 38, 38, 36, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 30, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 38, 39, 39, 39, 39, 39, 39, 34, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 37, 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38, 38, 38, 37, 38, 34, 38, 38, 36, 36, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 34, 37, 37, 37, 37, 35, 33, 37, 33, 32, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVHPGGSLRLSCSTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDHY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDVGSGMGLWFYDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVHPGGSLRLSCSTSGFTFTDHYMSWVRQPPGKALEWLAFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDVGSGMGLWFYDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1891 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10239:3720 (reversed)", "sequence" : "GGCCGAGGTGCACCTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGGTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTAACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACACCAGAGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCCTTGCGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 14, 33, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 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37, 33, 33, 33, 33, 35, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWGRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHQRYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWGRQTPDKRLEWVATISSGGSNTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHQRYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1892 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17857:3721 (reversed)", "sequence" : "CATCCAGGTTCAGCTTCAGCAATCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACGATGAGAAGTTCAAGAGCAAAGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCGGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGAGGGGTCTACTATGATTACGACGGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCCCTGCCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 34, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 32, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 33, 38, 39, 38, 39, 39, 39, 39, 37, 35, 38, 39, 39, 39, 38, 37, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 30, 38, 38, 39, 39, 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39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 34, 17, 33, 33, 33, 35, 31, 33, 33, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKSKATLTVDTSSSTAYMRLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGGVYYDYDGAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 327, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMRLSSLTSEDSAVYYCTRGGVYYDYDGAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1893 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15978:3723 (reversed)", "sequence" : "TGGGGAGGTAAAGCTTCAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCGCTTTTAGTGACACCTGGCTGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCCTGAGTGGGTTGCTGAAATTAGAACCAAAGCTGATGATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCATAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGTACCCCCCATCCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCATTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 33, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 37, 37, 39, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 37, 39, 39, 39, 39, 38, 34, 38, 38, 38, 39, 38, 39, 39, 39, 38, 37, 37, 38, 37, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 37, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 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"CCTCCAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAAATGGTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTTCATCCACTGCACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 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32, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSNGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELEKPGASVKISCKASGYSFTGYNMNWVKQSNGKSLEWIGNIDPYYGGTSYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARNGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1905 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10529:3734 (reversed)", "sequence" : "TAATGAAGTGATGCTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCGGACTCCAGACAAGAGGCTGGCGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACAGTATGGTAACTACTGGGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCTAAACAACACCCCCATCGGTCTATCCCTTGATGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 29, 29, 32, 32, 35, 20, 33, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 32, 19, 33, 38, 39, 35, 37, 39, 34, 34, 32, 37, 34, 37, 37, 39, 38, 32, 38, 37, 33, 38, 39, 39, 39, 39, 37, 34, 37, 39, 32, 38, 38, 39, 39, 39, 39, 39, 32, 38, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 37, 37, 39, 37, 39, 36, 39, 38, 39, 39, 36, 39, 38, 39, 38, 37, 38, 38, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 38, 38, 39, 36, 39, 37, 37, 37, 39, 37, 39, 39, 37, 18, 37, 38, 38, 37, 31, 31, 32, 36, 38, 14, 33, 27, 33, 37, 38, 39, 16, 37, 37, 15, 38, 15, 37, 36, 38, 37, 37, 30, 14, 29, 35, 14, 29, 30, 36, 39, 38, 38, 38, 38, 35, 39, 27, 27, 38, 37, 35, 38, 38, 39, 39, 38, 34, 39, 37, 38, 38, 39, 38, 38, 38, 38, 37, 33, 38, 38, 38, 38, 37, 33, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 37, 36, 34, 33, 38, 31, 39, 37, 38, 37, 37, 37, 26, 33, 37, 36, 39, 39, 39, 39, 37, 39, 37, 39, 39, 38, 39, 37, 27, 37, 38, 36, 38, 38, 37, 38, 37, 39, 38, 39, 39, 39, 37, 39, 38, 39, 39, 37, 39, 39, 38, 38, 37, 38, 15, 34, 38, 37, 37, 39, 38, 29, 39, 39, 38, 16, 38, 39, 39, 39, 39, 39, 39, 37, 38, 36, 39, 36, 39, 39, 39, 39, 38, 36, 38, 39, 38, 39, 38, 39, 37, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 16, 39, 38, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 39, 37, 39, 37, 38, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 38, 39, 37, 38, 37, 37, 36, 14, 33, 32, 34, 15, 37, 39, 37, 33, 16, 35, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 34, 38, 36, 36, 36, 36, 34, 35, 33, 16, 16, 34, 30, 32, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MSWVRRTPDKRLAWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQYGNYWDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRRTPDKRLAWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARQYGNYWDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1906 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"name" : "translation", "value" : "GFNIKDTF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNKVSLQLSGLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPASGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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37, 38, 34, 37, 37, 37, 37, 37, 35, 35, 32, 29, 29, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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(294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", 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"CTGCCAGGTTCAGCTTCAGCAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACAACATGAACTGGGTGAAGCGGAGCAATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGAGGGCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCCTATCCATTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 38, 39, 38, 38, 38, 37, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKRSNGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : 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154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYSDTVKGRFTIARDNAKNTLYLQMSSLKSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ 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"KCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VDPANGNS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"GCTCGATGTGAAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACCACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 30, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 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32, 32, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYHC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLSSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSHYGYYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "55" }, { "name" : "Source-Identity", "value" : "81.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LLVFRCL" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"sequence" : { "name" : "ERR346596.2011 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19561:3808 (reversed)", "sequence" : "CCAGCAGGTCCAACTGCAGCAGCCTGAGTCCACACACCACTCCTGGTCCCAGAAGTCACGGCAAGCACTGAGAATTCTCCCTCAGAAAATGTGACAGGGGGAAGGGAAGGACACTTTCCTTTGTGTTGCTCCCCCCTGACTGGTTAGATGAGGTGTCCTCCTCACAATGTGGTCCCCCTTGCCCTCTATGGGGTACTCACTTGGCCTGTAGAAAGAGCTCCTTGTTGAAAGGCTTGTGTCCCCACTTGTTTCTCTTCCCCCATCAGCCTATCCCCTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 36, 38, 38, 39, 39, 39, 39, 39, 38, 33, 37, 37, 38, 39, 39, 39, 39, 38, 33, 38, 39, 39, 39, 39, 38, 38, 38, 37, 37, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 25, 39, 39, 39, 39, 37, 39, 37, 38, 34, 37, 38, 36, 36, 36, 36, 37, 39, 33, 38, 38, 36, 39, 37, 26, 9, 39, 39, 39, 38, 39, 39, 38, 39, 26, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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232, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 254, "max" : 281, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 233, "max" : 253, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "LVSPLVS" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 1, "max" : 22, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQ PPGKGLEWIGNIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTATDTAIYY CAR" }, { "name" : "IMGT_allele", "value" : "IGHV4-39*01" }, { "name" : "IMGT_gene", "value" : "IGHV4-39" }, { "name" : "Videntity", "value" : "96,66% (289/299 nt)" }, { "name" : "Source-Sequence", "value" : "AF417843" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "68.18%" } ] } ] }, { "sequence" : { "name" : "ERR346596.2012 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8884:3809 (reversed)", "sequence" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFASYDINWVRQRPEQGLEWIGWIFPGDNSTKYNEKFKGKATLTTDKSSSTAYMQLSRLTSEDSAVYFCAHDGLLPGMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2022 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"name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : 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"EVKLMESRAELVKPGASVKLSCKASGYSFTSYWMHWVKQRPGQGLEWIGEISPSNGRSNYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVYYCTRSELRRGGYALDYWGLGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2032 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15898:3828 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGCAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTTGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 33, 33, 33, 37, 37, 37, 37, 20, 37, 32, 38, 19, 37, 19, 33, 34, 37, 37, 38, 35, 20, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 33, 38, 38, 37, 38, 36, 38, 36, 36, 39, 39, 39, 39, 39, 39, 37, 33, 38, 38, 39, 37, 37, 39, 39, 38, 39, 33, 37, 39, 39, 37, 37, 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"VHWVRQPPAKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNLALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFPSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKFKDKATLTADKSSSTAYMEMSSLTSEDSAFYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHGGSRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { 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"value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHGGSRGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2039 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20653:3832 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGAGGGCGATTACTACGGTAGTAGCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCTTGTCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 32, 35, 33, 38, 38, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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"QVQLKQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCAREGDYYGSSDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2161 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15479:3919 (reversed)", "sequence" : "TTGTGAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCACTGTATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 40, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"CGCGGAGGTGCAGCTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCGGCCAAAACAACAGCCCCATCTGCCCATCCACTGACTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 35, 33, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 39, 38, 39, 37, 39, 39, 38, 38, 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"EVQLQQSGADLVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVRLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWLRKFPGNKLEYMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GDSITSGY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YHNPVLKSRVSFTRDTSKNQYYLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASSYDLLWMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" 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"QVQLQQSGPELVKPGALVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADRSSSTAYMQLSSLTSENSAVYFCARSDDGFPYSFDSWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1985 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11645:3789 (reversed)", "sequence" : "CCTTGACGTGATGTTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAATAATAGCACTAATTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTCCCTGCACTTGAATCCTGTGACTACTGAGGACACAGCCACATATTACTGTGTAAGACCTTACGGCCCCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAAAAACACCCCCATCTGCCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 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39, 37, 39, 39, 37, 37, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 34, 36, 18, 38, 39, 38, 38, 39, 39, 36, 37, 38, 38, 38, 39, 39, 38, 38, 37, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 33, 33, 33, 33, 33, 33, 32, 33, 32, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { 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"IHYNNST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRPYGPFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.54%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYNNSTNYNPSLKSRISITRDTSKNQFSLHLNPVTTEDTATYYCVRPYGPFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1986 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13006:3789 (reversed)", "sequence" : "CATGGAGGTCCAGCTGCAACAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATACTACCGATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGCCTATCCCCTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : 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}, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYRYYYAMDY" } ] }, { 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"YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSNGKNLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDSN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYSQKFKGKATLTVDKSSSTAYMQLRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKKDYGSSSFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : 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"M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELEKPGASVKISCKASGYSFTGYNMNWVKQSNGKSLEWIGNIDPYYGGTSYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARGGPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.1992 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15456:3791 (reversed)", "sequence" : "AGCCGAGGTCCAACTGCAACAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTACAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCTATCCCTTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 32, 33, 33, 33, 35, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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37, 33, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTTDPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IDPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", 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"ATTGCAGGTTCAGCTCCAGCAGTCTGGAGCTGAACTGGTAAGGCCTGGGACTCCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAATGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCTTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 18, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 37, 38, 37, 37, 37, 38, 38, 39, 37, 38, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 35, 38, 33, 38, 37, 39, 39, 39, 38, 39, 38, 39, 39, 37, 38, 39, 36, 38, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 37, 37, 38, 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35, 16, 35, 32, 32, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTPVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTPVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.1994 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10607:3793 (reversed)", "sequence" : "ATCGGAGGTGAAGCTTCAGGAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCCGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTTCATCCCCTGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 35, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 34, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 35, 35, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 36, 38, 34, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 33, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 34, 38, 39, 37, 37, 36, 36, 38, 37, 39, 39, 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39, 38, 38, 37, 32, 38, 38, 39, 38, 38, 38, 36, 37, 37, 37, 38, 38, 36, 33, 33, 33, 37, 37, 32, 33, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IPPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", 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"CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, 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"Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLDWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVNYRYGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2135 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19922:3905 (reversed)", "sequence" : "GCCTGAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTAAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGGTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCATTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 35, 38, 38, 39, 39, 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38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 31, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGGMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVKPGGSLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATISDGGGYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGGMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2137 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8052:3906 (reversed)", "sequence" : "GTGTGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTCAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATCCACTTTCAGTAGTTATCCCATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAAGCATTAGTGCTGGTGGTAGTGACACCTACTATCTAGACAGTGTGAAGGGGCGATGCACCATCTCCAGAGACAATGTCAAGAACACCCTGTTCCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAATGGTTACTACGGCTACGGTCTGGGGCCAAGGGACTCTGGTCACTGTCCCTGCAGCTACAACAACAGCCCCATCGGCTCATCCCTTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 33, 37, 37, 37, 37, 33, 37, 37, 38, 37, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 35, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 32, 35, 38, 39, 39, 39, 39, 39, 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], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGSVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSTFSSYP" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYLDSVKGRCTISRDNVKNTLFLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISAGGSDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVPA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AMVTTATV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.88%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGSVKPGGSLKLSCAASGSTFSSYPMSWVRQTPEKRLEWVASISAGGSDTYYLDSVKGRCTISRDNVKNTLFLQMSSLRSEDTAMYYCAMVTTATVWGQGTLVTVPA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2138 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13199:3906 (reversed)", "sequence" : 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"ERR346596.2147 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9065:3912 (reversed)", "sequence" : "TTTAGAGGTGAAGCTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGACTAGAATGGATTGGAGAAATTAATCCAGATAGCAGGACGATAAACTACAAGCCATCTCTAAAGGAGAAATTCATCATGTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGGTCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCCATCCCTTGGGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 34, 33, 34, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 36, 39, 39, 38, 39, 39, 39, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 36, 38, 39, 38, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 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"GCCGGAGGTGCAGCGGGTGTAGTCTTCCTTTCCTCTGTATCCCTCCATCTGGCTTCCTAGGCAGTTTACCTGGCCCGACTTCTCTGTGGGTGACCAAACACACTTGAAATGAAAACAAAGGCTGGTGGCTGTGAGCAACAGAGCAGGAGATAAGGACTTGGTTGTCAGATGCCCCAGTAGCCAGGACAAATGCTGGAAAGAGCAGCACTTCCTGGCTGTAGTTCTCTTTAAAAGTGTAGAGTTTTTTTTGTTTTGTTTTGTTGTTGTTGTTGTTCTTCTTCTAATCCAAAATCTTTCTTGCTCATTTGCTCACCCCATCTGTTTATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 36, 36, 36, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 35, 38, 37, 39, 39, 38, 39, 39, 38, 37, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 38, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQSPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.20%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : 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38, 39, 38, 36, 36, 38, 38, 37, 34, 38, 38, 37, 38, 38, 38, 38, 38, 38, 33, 31, 33, 33, 37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGPEVVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQGHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTAYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIRTRAYYDHPLGFSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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"value" : "EVQLQQSGAGLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVS*" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHESYGNYLYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "83.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAGLVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHESYGNYLYFDVWGAGTTVTVS*" } ] } ] }, { "sequence" : { "name" : "ERR346596.2117 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21961:3895 (reversed)", "sequence" : "TTGAGACGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCATGGTGGTGGTACCACCTACTATTCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCTATTTATTACTGTACAAGACATGGTGGTTACTACCCTTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCATTGACGG", 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305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKISCTGSGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFCARSAYYGSSYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2254 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21335:3977 (reversed)", "sequence" : "TGCCGAGGTCCAGCTGCAACAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCCGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATGAGGTATTACAAAGTACTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 33, 32, 35, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 38, 38, 37, 39, 39, 39, 37, 34, 39, 37, 17, 17, 36, 32, 37, 39, 38, 36, 36, 37, 38, 36, 39, 37, 38, 39, 39, 39, 37, 36, 30, 36, 32, 32, 38, 38, 38, 35, 37, 38, 30, 29, 36, 39, 39, 35, 38, 39, 37, 37, 39, 18, 18, 19, 38, 38, 39, 39, 39, 19, 37, 38, 33, 37, 37, 39, 18, 33, 35, 39, 38, 18, 38, 18, 37, 38, 18, 37, 38, 39, 18, 37, 30, 38, 36, 39, 33, 18, 18, 37, 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38, 39, 37, 16, 32, 37, 38, 36, 16, 39, 36, 39, 38, 38, 16, 34, 39, 39, 36, 34, 37, 35, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSPRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDEVLQSTYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSPRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDEVLQSTYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2255 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18712:3979 (reversed)", "sequence" : "TCAGGAGGTCCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTTTATGAACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGATAATACTGAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAACAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATGGTTAGTACGTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCATTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 33, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 38, 37, 38, 39, 36, 38, 38, 38, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYDPKFQGKATITTDTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANDNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWLVRMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : 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32, 32, 33, 33, 33, 33, 33, 33, 33, 33, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVKPGESLKFSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GITVSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGYVDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVKPGESLKFSCAASGITVSSYTMSWVRQTPEKRLEWVASITGGGTTYYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYCARHYGYVDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2069 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10869:3853 (reversed)", "sequence" : "CCGCGAGGTGCAGCGGGTTGAGTCGCGGGCTCAGCAGTCCCGGCAGCTGGAGGAACGGCAAGCGGAGAACGCAGCACAGAGAGAAGCCTATGAGACGCTGCTCCAGCAAGCTGTGCACCAGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCACGCGACTTGCTGGAGCAGCTTGTGCAGCGTAAGGCGCGCGCCGCCGCTGAGCGCAATCTACGTAATGAGCGTAGAGAGAGGTGAAAACTCTGGGCCACGCCCCTGGGGAGGCAATCTGGACTCGCGTGGTTAAAAGGTGTAGGGAGGAGGGCGAGTGTGGGGGAGGTAAGGGTCTCTCACTGATCAGAAGGATCGGCATAGGCTGTGGTGCCCCATCTGCTCATCCCTTGACTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 37, 38, 38, 38, 39, 38, 38, 38, 38, 34, 39, 38, 35, 35, 38, 38, 38, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 34, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 36, 36, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 34, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 35, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 35, 32, 32, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 35, 35, 37, 33, 37, 33, 32, 37, 37, 37, 34, 32, 35, 35, 38, 38, 38, 38, 37, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 38, 38, 37, 37, 36, 38, 37, 38, 38, 38, 37, 37, 39, 39, 38, 37, 39, 37, 39, 39, 39, 38, 38, 37, 38, 33, 38, 36, 33, 38, 39, 39, 38, 34, 34, 27, 38, 38, 34, 30, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 37, 34, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 38, 38, 38, 37, 38, 37, 38, 38, 38, 38, 37, 38, 38, 39, 39, 37, 38, 39, 39, 39, 38, 39, 38, 37, 37, 34, 38, 37, 39, 37, 35, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 36, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 37, 37, 37, 36, 30, 38, 36, 38, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 102, "max" : 173, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SSKLCTRRRHCAGSRKRHATCWSS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 219, "max" : 269, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MSVERGENSGPRPWGGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 174, "max" : 218, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "LCSVRRAPPLSAIYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 340, "max" : 388, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 270, "max" : 339, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.2072 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22524:3854 (reversed)", "sequence" : "TTCTGAGGTGCAGCGGGTGGAGTCAGGACTTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGTATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAATGGATTGTATATATTTATCCTCACAATGGTGGTAATGGCTACAACCAGAAGTTCAAGAACAAGGCCACATTGACTGTAGACAGTTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGATCGAGGGGTACTACGGCTACGACTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGGCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 37, 38, 38, 17, 36, 32, 38, 38, 39, 39, 33, 38, 39, 37, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 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38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 33, 32, 33, 33, 33, 32, 37, 33, 33, 32, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVQRVESGLELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIVY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKNKATLTVDSSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPHNGGN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRGTTATTYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 371, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGLELVKPGASVKISCKASVYTFTDYNMHWVKQSHGKSLEWIVYIYPHNGGNGYNQKFKNKATLTVDSSSSTAYMELRSLTSEDSAVYYCARSRGTTATTYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2074 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10094:3857 (reversed)", "sequence" : "TGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGCAGCCTGGGCAGGGCCTTGAGTGGTTTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCGAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGAGGGGGTTGCCTACTTTGACTACTGGTGCCAAGGCACCCCTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCTTGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 18, 32, 37, 33, 35, 37, 37, 37, 37, 35, 38, 37, 38, 37, 37, 37, 38, 37, 38, 38, 39, 37, 37, 39, 39, 32, 39, 39, 39, 34, 17, 32, 38, 39, 39, 18, 37, 37, 33, 38, 37, 39, 39, 39, 39, 36, 37, 38, 36, 39, 39, 38, 38, 39, 38, 33, 37, 37, 38, 39, 39, 39, 37, 39, 39, 39, 37, 37, 37, 37, 37, 39, 37, 39, 34, 38, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 33, 35, 37, 38, 37, 38, 34, 38, 39, 39, 38, 19, 19, 35, 36, 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"translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2077 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22662:3860 (reversed)", "sequence" : "GATACAGGTGCAGCTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCCCTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGTCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACAGCTGAGGACACTTCCTTCTATTACTGTGCTTCCTATTACTACGGTAGTAGCTCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCCATCCACTGGTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 32, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 32, 36, 38, 15, 32, 32, 37, 16, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 14, 36, 14, 32, 37, 39, 38, 34, 38, 37, 39, 39, 16, 35, 38, 37, 39, 39, 39, 39, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFNGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSTAYMQFNSLTSEVSSVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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"TGGAGAGGGCAGCTTCAGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTTATTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTGCCACTGTCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAATAACCAGTTCTTCCTGCAGTTGAATTTCGTGACGACTGAGGACACAGCCACATTTTACTGTTCAAGATGCGCTGGGGCCCTCTATGCTAGGGACTACTGGGGTCAAGGGACCTCAGTCCCCGTCTCCTCAGCCAAAACAACACCCCCAACAGCTTACCCATTGGAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 32, 33, 32, 32, 37, 32, 33, 32, 32, 32, 32, 36, 38, 38, 37, 37, 37, 38, 38, 34, 38, 19, 32, 38, 39, 37, 35, 35, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 39, 33, 38, 34, 38, 32, 38, 37, 37, 39, 39, 38, 39, 37, 37, 38, 37, 38, 34, 33, 38, 18, 37, 38, 18, 38, 31, 18, 38, 37, 37, 37, 38, 38, 37, 39, 39, 36, 38, 39, 37, 19, 38, 39, 39, 37, 33, 37, 39, 39, 39, 36, 37, 37, 39, 37, 34, 34, 36, 38, 39, 39, 38, 35, 37, 38, 37, 39, 38, 34, 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16, 37, 33, 16, 16, 34, 18, 18, 18, 29, 16, 16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 4, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RGQLQESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 106, "max" : 156, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 105, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSYYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYNPSLKSRISITRDTSNNQFFLQLNFVTTEDTATFYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 157, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 328, "max" : 360, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTSVPVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 327, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRCAGALYARDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 4, "max" : 296, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : 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"EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : 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"EVQVVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDIYGRDSWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2209 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18306:3950 (reversed)", "sequence" : "AATTCAGGTTCAGCTCCAGCAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTCCTATTTACACTGGGTGAAGCAGAGGCCTGAGCAGGGCCTGGACTGGATTGGAAGGATTGATCCTGCGAAAGGTAATACTAACTATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTTCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTTCTGCGCTAGAAACTACCCTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTCTATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 35, 35, 37, 37, 38, 38, 38, 38, 38, 38, 33, 36, 38, 38, 38, 39, 39, 39, 39, 33, 17, 36, 36, 36, 37, 38, 37, 39, 37, 39, 38, 37, 37, 38, 37, 39, 39, 39, 37, 39, 35, 36, 34, 36, 38, 37, 37, 37, 38, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 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"CCGGGAGGTTCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCCTTGGCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 33, 37, 38, 38, 19, 33, 33, 38, 38, 38, 39, 39, 39, 38, 39, 37, 17, 36, 32, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 36, 36, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 36, 38, 33, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 35, 38, 39, 37, 38, 37, 39, 39, 37, 38, 38, 39, 37, 39, 38, 18, 31, 36, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 36, 38, 38, 39, 38, 36, 39, 34, 38, 39, 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38, 38, 38, 37, 33, 33, 33, 33, 37, 37, 32, 32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"CGGGGAGGTGAAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCACTGTAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 35, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 36, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 33, 37, 38, 39, 39, 39, 33, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 32, 36, 36, 39, 37, 39, 39, 35, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 36, 39, 39, 39, 39, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : 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"value" : "0" } ] } ] }, { "sequence" : { "name" : "ERR346596.2218 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17926:3955 (reversed)", "sequence" : "CGGGGAGGTGAACGTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAACAACAACCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGACTACTACGGTAGTAGTTACATTGGTTACTGGGGCCAGGGGACTCTGGTCACTGTCTCTACAGCCAAAACAACAGCCCCATCTGTCCATCCATTGATGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 37, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 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38, 38, 39, 38, 33, 39, 38, 39, 37, 37, 38, 39, 39, 35, 38, 39, 37, 34, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 37, 34, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" 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: 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYYGSSYIGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVKPGGSLKLSCAASGFTFSNYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNANNNLYLQMSSLKSEDTAMYYCARDYYGSSYIGYWGQGTLVTVST" } ] } ] }, { "sequence" : { "name" : "ERR346596.2219 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18458:3956 (reversed)", "sequence" : "CTAGGAGGTACAGCTTCAGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATATTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACCGGCGACCTACTATGGTAACTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCACTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 33, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPATYYGNFYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKMSCKASGYTFTSYIMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARPATYYGNFYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2221 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19808:3957 (reversed)", "sequence" : "TAGGCAGGTGCAGCTGAAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAACAACGGTCGTACTAACTACAATGAGAAGTTCAGGAACAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGATCTATTACTGTGCAAGATATTACAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCATTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 33, 37, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 34, 38, 39, 39, 36, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 38, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 37, 36, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 38, 37, 38, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 36, 39, 39, 37, 39, 39, 39, 31, 30, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 37, 38, 37, 39, 39, 39, 37, 38, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 34, 36, 37, 39, 39, 36, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 39, 38, 39, 38, 37, 38, 37, 34, 36, 36, 38, 36, 38, 39, 38, 34, 38, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFRNKATLTVDKSSSTAYMQLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPNNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCKTSGYTFTSYWMHWVKQRPGQGLEWIGEINPNNGRTNYNEKFRNKATLTVDKSSSTAYMQLSSLTSEDSAIYYCARYYNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2222 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19089:3957 (reversed)", "sequence" : "TGTAGAGGTACAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAATTGATGACACAGCCATGTACTACTGTGCCAGAAGCGGATTACGACGTCCCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 20, 35, 33, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 37, 36, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 35, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 33, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 36, 38, 38, 39, 38, 38, 39, 39, 39, 33, 37, 38, 37, 21, 37, 39, 38, 38, 38, 39, 37, 37, 35, 34, 37, 38, 38, 39, 38, 39, 38, 39, 38, 39, 38, 38, 38, 35, 35, 36, 39, 34, 37, 37, 33, 15, 37, 38, 37, 38, 38, 37, 34, 34, 37, 34, 38, 38, 34, 34, 34, 38, 34, 39, 39, 38, 39, 37, 39, 37, 38, 39, 38, 33, 38, 34, 37, 37, 39, 39, 39, 38, 34, 39, 37, 38, 37, 39, 39, 38, 34, 38, 33, 39, 39, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 37, 39, 37, 37, 37, 39, 39, 38, 35, 39, 38, 33, 39, 33, 39, 38, 39, 37, 37, 36, 39, 39, 39, 39, 37, 39, 37, 35, 39, 39, 39, 39, 39, 39, 38, 33, 36, 39, 39, 38, 37, 35, 14, 38, 39, 39, 38, 38, 37, 36, 38, 35, 38, 38, 38, 34, 37, 36, 38, 37, 37, 38, 39, 37, 39, 39, 39, 39, 35, 34, 36, 30, 38, 39, 37, 37, 37, 38, 19, 33, 38, 38, 38, 38, 36, 39, 36, 38, 37, 18, 37, 38, 36, 38, 32, 32, 37, 36, 34, 35, 38, 33, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 36, 36, 37, 38, 36, 38, 39, 37, 38, 38, 38, 38, 38, 38, 37, 36, 34, 32, 32, 33, 33, 33, 37, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQIDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGLRRPAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQIDDTAMYYCARSGLRRPAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2224 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13537:3957 (reversed)", "sequence" : "CATCGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTCCTGGTTATGCATTCACTAATTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATTTTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGCATCTCAACAGCCTGACATCTGAAGACTCTGCAGTCTATTACTGTGCAAGATCCTTTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCAACTGCCTATCCCTTGATGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 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], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKAP" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSFAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAEVVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2226 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13815:3958 (reversed)", "sequence" : "CGCACAGGTCCAGCTCCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAAAGCCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGCAACTACCTACAACCAGAATTTCAAGGACAAGGCCAGCTTGACTGTAGATAAGTCCTCCAGCACAGCCTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCTTGGGATTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCTTGACGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 33, 38, 38, 38, 38, 38, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 37, 37, 35, 37, 36, 39, 39, 37, 37, 39, 38, 33, 39, 39, 38, 37, 38, 39, 38, 39, 38, 38, 37, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 36, 37, 38, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 38, 30, 38, 36, 36, 38, 38, 39, 38, 38, 38, 37, 37, 19, 38, 33, 37, 34, 37, 33, 33, 37, 33, 33, 33, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 311, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSWDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" 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"AAAGCAGGTCCAACTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTATACGTACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAATGGTGGTACTAACTTCAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATGCATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACCTTATGGTGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCATTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 30, 32, 33, 37, 37, 30, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 36, 33, 38, 39, 39, 39, 39, 38, 39, 34, 38, 36, 36, 17, 33, 38, 38, 38, 37, 39, 37, 36, 38, 39, 39, 39, 39, 37, 36, 17, 36, 36, 36, 39, 39, 39, 39, 39, 39, 39, 20, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 17, 18, 18, 37, 38, 37, 39, 39, 39, 38, 37, 39, 39, 33, 39, 31, 38, 33, 38, 39, 39, 18, 37, 39, 37, 37, 38, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 37, 38, 37, 39, 39, 32, 38, 30, 14, 33, 38, 38, 39, 37, 18, 14, 37, 38, 37, 39, 37, 34, 38, 39, 34, 15, 37, 39, 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"name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", 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"CACTGAGGTCCAGCTGCAACAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAAATGTCCTGCAAGGCTTCTGGCTACAGGTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTTATCCTGGAAATGGTGATACTAGCTACAACCAGAAGTTCAAGGACAAGGCCAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAGAGGAAGCGATTATGGAAAAAAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCCGCCAAAACAACACCCCCATCAGCTCATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 32, 33, 33, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 36, 39, 38, 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39, 38, 38, 38, 38, 38, 37, 38, 38, 34, 38, 33, 32, 33, 33, 33, 33, 33, 33, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKASGYRFTSYWMHWVKQRPGQGLEWIGAFYPGNGDTSYNQKFKDKAKLTAVTPAITAYMELSSLTNEDSAVYYCTRGSDYGKKAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2324 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11459:4025 (reversed)", "sequence" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTASS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAREGVDYFDYWGQGTTLTASS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2325 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12570:4025 (reversed)", "sequence" : "GCGGGAGGTGAAGCTGGTGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGTGAGGAACTGGGCCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGCGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 33, 34, 32, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 38, 32, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 34, 38, 39, 39, 39, 38, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 37, 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33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"AATTGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCCGTGCAAGAGTGGATTTTATTACTACGGCCCCTGATGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTTATCCCCTGAGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 35, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 36, 38, 39, 39, 39, 38, 37, 38, 39, 38, 39, 38, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 32, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "PGLLP" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WFASWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.49%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFRARVDFITTAPDAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2327 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IPPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", 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} ] } ] }, { "sequence" : { "name" : "ERR346596.2333 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21044:4030 (reversed)", "sequence" : "TTTACAGGTTCAGCTTCAGCAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCGTCTGGTTACTCATTCACTGTCTACTACATGCACTGGGTGAAGCAAAGCCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCTTTATAATGGTGCTACTACCTACAACCAGAATTTCAAGGACAAGGCCAGCTTGACTGTAGATAAGTCCTCCAGCACAGCCTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGAGGGTTACTACGTGATTGGACTATTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCACTGGTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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38, 34, 38, 39, 39, 36, 17, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 37, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTVYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INLYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRVTT*LDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "LDYWGQGTSVNVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M24786" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTVYYMHWVKQSHVKSLEWIGRINLYNGATTYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYCARRVTT*LDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2334 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8042:4031 (reversed)", "sequence" : "GCGGGAAGTGAAGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGATTCTCATTAAGTAGCTATGGTGTCAGCTGGGTTCGCCAGCCTCCAGGAAAAGGTCTGGAGTGGCTGGGAGTAATCTGGGGTGACGGGAGCACAAATTATCATTCAGCTCTCATATCCAGACTGAGCATCAGCAAGGATAACTCCAAGAGCCAAGTTTTTTTAAAACTGAACAGTCTGCAAACTGATGACACAGCCACGTTCTACTGTGCCAAAGCCAACCGCTACGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCACTGACTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 35, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 36, 39, 39, 38, 39, 37, 39, 39, 37, 37, 39, 32, 36, 36, 37, 32, 38, 37, 38, 38, 37, 35, 39, 38, 38, 37, 38, 38, 37, 32, 36, 37, 36, 38, 36, 38, 34, 39, 38, 38, 38, 37, 36, 34, 38, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYHSALISRLSISKDNSKSQVFLKLNSLQTDDTATFYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKANRYGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVSGFSLSSYGVSWVRQPPGKGLEWLGVIWGDGSTNYHSALISRLSISKDNSKSQVFLKLNSLQTDDTATFYCAKANRYGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2335 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16334:4031 (reversed)", "sequence" : "AAGCCAGGTTCAGCTGCAGCAATCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAAGTGGTAGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTTTATCCCCTGTGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 32, 33, 32, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 34, 39, 39, 39, 37, 37, 37, 38, 37, 37, 36, 33, 19, 17, 38, 32, 36, 38, 37, 39, 33, 37, 34, 39, 38, 38, 39, 36, 39, 32, 17, 38, 38, 39, 33, 38, 39, 39, 39, 38, 36, 38, 34, 37, 39, 37, 39, 39, 18, 38, 37, 37, 37, 38, 36, 38, 39, 39, 33, 39, 39, 39, 37, 39, 32, 36, 15, 33, 36, 18, 18, 33, 33, 31, 38, 37, 39, 35, 19, 33, 37, 37, 38, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRYYRYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", 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"GAAGCAGGTTACTCTGAAAGAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTTAGTAGCTACTGGATAGAGTGGGTAAATCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTACTACTCACTACAATGAGAAGTTCAAGGACAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGGGGGATATGATACCTCCATTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTTATCCATTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 31, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 37, 37, 39, 39, 39, 38, 38, 38, 33, 39, 39, 39, 35, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 39, 39, 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35, 38, 38, 33, 37, 37, 37, 37, 33, 33, 33, 33, 32, 18, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVTLKESGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVNQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPSNSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHFAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WEPLNWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WEP" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "X80305" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIDPSNSETRLNQKFMDKATLNVDKSSNTAYIQLSSLTSEDSAVYYCARNHFAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2160 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17180:3919 (reversed)", "sequence" : "GTCCCAGGTTCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATACCCTGCAAGGCTTCTGGATACACATTCACTGACTACCACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGCGTGGATTGGAGATATTGATCCTAACAATGGTACTACTATCTACAACCGGAACTTCAAGGGCAAGGCCACATTGACTGTAGATAAGTCCTCCAGCACAGCCTACATGGAACTCCGCAGCCTGACATCTGAAGACACTGCAGTCTATTACTGTGCAAGACCGAATACGACGCCGTTTGATTACTGGGGCCAAGGGACTCTGGTCACTGTCTTTTCAGCCAAAACGACACCCCCATCGGTCTATCCCCTGTAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 36, 38, 39, 39, 39, 39, 34, 35, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 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"Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPQLVRPGTSVKISCKASGYSFTSYWMHWVKQRPGQGLEWIGMIDPSDSETRLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAGYYCANLYGYLFDDWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2283 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13027:4001 (reversed)", "sequence" : "GCGAGAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCCCTGCTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 35, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 38, 38, 39, 37, 36, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 35, 37, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 37, 39, 39, 38, 37, 39, 39, 39, 37, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 36, 38, 33, 37, 38, 38, 38, 39, 39, 39, 37, 38, 39, 38, 38, 38, 38, 37, 38, 39, 39, 38, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 35, 37, 33, 37, 32, 32, 32, 33, 33, 33, 37, 37, 32, 32, 29, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 16, 33, 38, 38, 39, 36, 33, 38, 39, 38, 37, 37, 39, 38, 37, 39, 39, 38, 38, 38, 39, 38, 39, 39, 38, 39, 37, 36, 37, 36, 38, 38, 38, 39, 39, 39, 39, 39, 38, 16, 16, 37, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 38, 39, 36, 37, 33, 32, 38, 12, 29, 36, 39, 16, 29, 29, 37, 16, 29, 28, 35, 16, 27, 35, 27, 38, 37, 31, 35, 34, 35, 31, 34, 34, 34, 36, 39, 36, 38, 38, 33, 34, 32, 34, 36, 36, 36, 38, 39, 36, 39, 38, 38, 38, 37, 36, 37, 37, 33, 37, 13, 36, 37, 37, 37, 31, 37, 38, 38, 22, 38, 38, 38, 38, 38, 37, 37, 38, 38, 37, 39, 38, 39, 37, 38, 37, 37, 39, 37, 37, 33, 36, 38, 33, 37, 36, 37, 32, 37, 38, 33, 33, 37, 39, 39, 35, 37, 35, 39, 39, 39, 39, 39, 39, 39, 38, 17, 38, 38, 38, 35, 35, 38, 30, 18, 36, 39, 38, 35, 37, 33, 38, 38, 33, 33, 37, 38, 18, 37, 37, 30, 33, 19, 36, 39, 35, 39, 38, 36, 39, 34, 38, 39, 38, 14, 29, 14, 34, 38, 38, 37, 18, 37, 37, 39, 38, 20, 37, 38, 35, 20, 18, 36, 16, 32, 37, 37, 18, 18, 20, 33, 37, 38, 35, 34, 38, 32, 36, 38, 37, 37, 38, 32, 32, 32, 35, 37, 17, 32, 35, 37, 38, 39, 37, 38, 39, 39, 37, 36, 39, 39, 38, 38, 39, 39, 39, 38, 38, 36, 35, 38, 34, 34, 38, 37, 38, 37, 37, 36, 37, 38, 37, 34, 37, 37, 37, 37, 37, 33, 33, 30, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQRPEQGLEWNGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFNIKDTF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITTDTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPATGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASSGNYEGGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : 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] }, { "sequence" : { "name" : "ERR346596.2285 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9032:4002 (reversed)", "sequence" : "AATTCAGGTTCAGCTTCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCCAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCACCTCAGCCAAAACAACACCCCCATCGTCTATCCCTTGCCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 19, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 19, 20, 38, 39, 37, 39, 37, 39, 38, 38, 36, 38, 38, 39, 20, 37, 37, 39, 39, 39, 39, 32, 37, 38, 38, 38, 38, 39, 37, 20, 37, 37, 37, 38, 33, 36, 38, 37, 39, 39, 39, 37, 39, 38, 16, 33, 18, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 37, 39, 39, 39, 37, 39, 39, 38, 37, 39, 39, 33, 38, 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"max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVTS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" 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"QVQLQQSGPDLVKPGASVKMSCQASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVTS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2288 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9654:4004 (reversed)", "sequence" : "GATTCAGGTTCAGCTCCAGCAATCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGGTGCACTGGATGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACCGTAGACAAATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCATCTGTCCATCCCTTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 33, 37, 38, 37, 39, 39, 38, 38, 37, 38, 36, 37, 39, 39, 36, 39, 39, 38, 37, 36, 36, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 38, 36, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWMKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGNPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP 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"QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"TGCAGACGTGAAGCTGGTGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTAGTTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATACGCTACGGCTACGTACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCCCATCCCTTGAAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 33, 34, 34, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 37, 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38, 38, 38, 37, 32, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYATATYWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARYATATYWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2406 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38, 38, 38, 38, 39, 38, 38, 38, 37, 36, 36, 38, 37, 37, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPGNNDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWDWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASLRMSCKASGYTFTNYWINWIKQRPGQGLEWIGAIYPGNNDAKYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYCARNWDWVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2407 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20240:4090 (reversed)", "sequence" : "GATCGACGTGATGTTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACCGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTTATCCATTGGTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 36, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 38, 37, 37, 36, 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"TGAAGAGGTGCACCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCCTATCTTCATATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCATTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 36, 36, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 38, 37, 38, 39, 39, 39, 39, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPRGYRAYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : 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"name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGALVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWITY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : "AF174030" }, { "name" : "Source-Mismatches", "value" : "75" }, { "name" : "Source-Identity", "value" : "74.66%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGGLVQPGGSLKLSCAASGFDFSGYWMTWVRQAPGKGLEWIGEINPDSRTINYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWITYWGQGALVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2418 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12593:4097 (reversed)", "sequence" : "TAGCGAGGTGCACCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCATTGGCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 33, 33, 33, 31, 35, 32, 33, 37, 37, 35, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 34, 39, 38, 38, 38, 38, 38, 39, 39, 36, 37, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 36, 37, 38, 32, 37, 39, 33, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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"value" : "EVQLQQSGPELVRPGASVKMSCEASGYTFTSYWMHWVKQRPGQGLEWIGMIDPSNSETRLNQKFMDKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAKNHYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2422 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10580:4101 (reversed)", "sequence" : "CGAGCAGGTGCAGCTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAAGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCCCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATACCTCTACGGCTATACGGCTACGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 19, 32, 17, 36, 32, 36, 37, 38, 39, 39, 18, 38, 39, 39, 39, 39, 38, 39, 39, 33, 17, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 37, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYLYGYTATFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : 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"Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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: [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNESFKGKATFTADTSSNTAYMQLSGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSSSI" } ] }, { "name" : "FR4", "type" : "FR", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VAAFYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "VAA" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { "name" : "Source-Sequence", "value" : "AF062239" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSSSINYNESFKGKATFTADTSSNTAYMQLSGLTSEDSAVYYCARWLYGSCAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2424 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11763:4104 (reversed)", "sequence" : "AGCAGAGGTGCAGGGGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTTCATTAACCAGCTATGGTGTATATTGGGCTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGGTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTCTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTATACGGTAGTAGCTACGACCCCTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 18, 32, 33, 33, 37, 33, 33, 37, 33, 37, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 38, 37, 39, 39, 38, 37, 36, 36, 39, 36, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 32, 39, 39, 39, 39, 39, 39, 37, 39, 37, 38, 39, 36, 19, 37, 37, 18, 38, 38, 39, 39, 38, 39, 39, 38, 39, 37, 31, 38, 39, 38, 39, 39, 38, 39, 38, 36, 37, 37, 39, 39, 39, 39, 39, 38, 38, 37, 39, 36, 39, 37, 39, 39, 39, 36, 38, 38, 36, 38, 38, 39, 39, 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38, 39, 36, 36, 16, 38, 39, 36, 33, 35, 37, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 38, 36, 37, 36, 36, 38, 38, 39, 37, 38, 38, 37, 38, 37, 38, 38, 37, 17, 33, 33, 33, 33, 33, 35, 33, 33, 32, 32, 32, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 105, "max" : 155, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYWARQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 104, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 177, "max" : 290, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSGLMSRLSISKDNSKSQVLLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 156, "max" : 176, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 342, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 291, "max" : 341, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYGSSYDPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 296, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.20%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 323, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] } ] }, { "sequence" : { "name" : "ERR346596.2425 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12838:4105 (reversed)", "sequence" : "TGTTCAGGTTCAGCTCCAGCAGTCACCTTACGCCCAGCAACCACCATCCCAGACCCCTCATGCCCAGCCTTCGTATCAGCAGCAGCCGCAGACTCAGCAACCACAGCTTCAGTCCTCTCAGCCTCCATATTCCCAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCAACTCCATATCCCTCCCAGCAGTCCACCACACAACAGCATCCCCAGAGCCAGCCCCCCTACTCACAACCACAGGCACAGTCTCCCTACCAGCAGCAGCAACCCCATCTGTTCATCCCCTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 37, 37, 38, 39, 33, 38, 37, 35, 38, 17, 17, 37, 36, 17, 37, 39, 39, 33, 38, 38, 34, 39, 37, 39, 37, 35, 39, 32, 37, 32, 38, 32, 37, 38, 37, 35, 32, 20, 37, 37, 38, 36, 34, 37, 38, 39, 39, 38, 37, 38, 37, 37, 38, 38, 34, 37, 39, 37, 30, 16, 38, 37, 31, 14, 14, 29, 34, 37, 39, 37, 39, 38, 36, 39, 39, 37, 38, 32, 37, 14, 38, 39, 39, 39, 30, 18, 38, 39, 18, 38, 34, 37, 35, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 23, 35, 38, 37, 39, 37, 39, 24, 37, 34, 38, 27, 37, 35, 27, 37, 17, 37, 37, 37, 38, 39, 37, 37, 39, 37, 38, 38, 37, 38, 39, 39, 34, 28, 38, 37, 38, 39, 37, 38, 14, 37, 38, 37, 37, 35, 37, 35, 37, 39, 39, 36, 39, 39, 38, 39, 39, 39, 38, 34, 27, 34, 36, 38, 39, 38, 27, 34, 32, 37, 39, 38, 37, 37, 38, 34, 34, 37, 37, 37, 38, 39, 38, 27, 26, 30, 37, 38, 37, 38, 38, 37, 36, 36, 37, 38, 38, 32, 24, 20, 36, 32, 32, 16, 39, 39, 37, 37, 39, 37, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 38, 35, 37, 37, 38, 18, 38, 37, 18, 37, 39, 38, 39, 38, 17, 38, 36, 36, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 37, 34, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 216, "max" : 290, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "DRG*TDGVAAAGRETVPVVVSRGAG" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 125, "max" : 175, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "WSWGLLMWRLGWLLGIW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 176, "max" : 215, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 19, "max" : 33, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.2426 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21488:4107 (reversed)", "sequence" : "TTGACAGGTTCAGCTCCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGAACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAATGGATTGGTATAATTGATCCTTCAGACAGTGAGACTCACTACAATCAAATGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAACACAGCCTACATACAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAACTGGGCCTTTGACTACTGGGGCCAAGGCACCACTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCCTATCCATTGCGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 37, 36, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 37, 38, 34, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 34, 37, 34, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 33, 38, 38, 39, 39, 39, 39, 39, 34, 38, 38, 39, 35, 37, 39, 38, 37, 38, 38, 39, 38, 38, 38, 39, 37, 39, 39, 39, 38, 39, 38, 38, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 37, 38, 37, 37, 38, 37, 38, 38, 39, 37, 39, 38, 33, 39, 37, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 34, 37, 39, 27, 37, 30, 34, 39, 37, 38, 34, 37, 38, 39, 39, 38, 38, 39, 39, 38, 36, 37, 39, 38, 39, 37, 39, 39, 39, 39, 38, 33, 37, 39, 38, 36, 37, 37, 38, 37, 33, 39, 37, 33, 38, 33, 37, 18, 36, 37, 33, 38, 39, 38, 29, 29, 14, 36, 14, 38, 37, 36, 37, 37, 39, 37, 39, 39, 38, 39, 38, 39, 38, 36, 39, 39, 37, 38, 38, 38, 38, 30, 37, 36, 39, 39, 38, 20, 35, 20, 36, 39, 38, 37, 37, 16, 36, 38, 37, 39, 38, 39, 37, 39, 39, 39, 37, 38, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 34, 30, 37, 36, 38, 33, 39, 38, 38, 20, 20, 38, 17, 39, 39, 39, 39, 39, 38, 37, 36, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 32, 32, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNQMFKDKATLTVDKSSNTAYIQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPSDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTHSLLS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWAFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 347, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.57%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLEWIGIIDPSDSETHYNQMFKDKATLTVDKSSNTAYIQLSSLTSEDSAVYYCARNWAFDYWGQGTTHSLLS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2343 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20806:4038 (reversed)", "sequence" : 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37, 37, 33, 37, 37, 33, 33, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 39, 37, 37, 37, 38, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 33, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 38, 36, 36, 37, 37, 37, 38, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 38, 36, 38, 34, 38, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 37, 38, 39, 38, 38, 38, 38, 38, 39, 37, 38, 38, 37, 37, 38, 38, 38, 38, 37, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVTLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYKFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQNFKGKATLTADRSSTTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TREGIYFGYDVPMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "91.38%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVTLSCKASGYKFTDYEMHWVKQTPVHGLEWIGSIDPETGGTAYNQNFKGKATLTADRSSTTAYMELRSLTSEDSAVYYCTREGIYFGYDVPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2443 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19774:4119 (reversed)", "sequence" : "GGACGAGGTCCAGCTGCAACAGTCTGGACCTGAGTTGGTGAAGCCTGGGACTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCGGAGGGTCGATATTACTTTGCTATGAACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTTATCCCCTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 38, 39, 39, 39, 38, 37, 38, 35, 39, 39, 39, 39, 39, 39, 39, 38, 25, 39, 39, 39, 39, 36, 39, 39, 37, 37, 38, 35, 15, 34, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 37, 37, 39, 39, 39, 38, 36, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 39, 39, 38, 38, 37, 39, 39, 37, 37, 32, 38, 38, 38, 38, 38, 38, 38, 39, 38, 36, 34, 14, 14, 34, 37, 37, 36, 39, 39, 39, 39, 38, 39, 39, 37, 36, 37, 39, 37, 37, 16, 35, 38, 37, 36, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 37, 36, 38, 38, 38, 36, 38, 32, 39, 37, 39, 39, 38, 38, 33, 18, 37, 39, 37, 39, 37, 20, 37, 31, 37, 38, 37, 37, 38, 39, 38, 37, 36, 37, 37, 36, 39, 39, 37, 38, 37, 38, 39, 39, 38, 38, 39, 37, 37, 37, 32, 37, 16, 37, 36, 37, 36, 37, 33, 38, 39, 34, 38, 37, 37, 17, 32, 39, 37, 39, 36, 37, 38, 39, 34, 38, 38, 34, 38, 32, 37, 38, 37, 38, 37, 38, 37, 34, 38, 33, 32, 33, 37, 37, 37, 37, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSEGRYYFAMNY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFALDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFALDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSEGRYYFAMNYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2444 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20171:4120 (reversed)", "sequence" : "AATACAGGTCCAGCTTCAGCAGTCTGGGGCTGAACTGGCAGAACCTGGGGCCTCAGTGAAGATGTCCTGTAAGGCTTCTGGCTACACCTTTACTAGTTTCTGGCTGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTCCCACTGATTATACTGAGTACGATCAGAAGTTCAGGGACAAGGCCACATTGACTGCGGACAAGTCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTACAATATGGCCTTACTATGTTATGAACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAGCAACAGCCCCATCGGCCCATCCACTGATGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 37, 37, 37, 37, 37, 34, 38, 38, 38, 38, 36, 38, 38, 38, 38, 37, 39, 39, 35, 34, 37, 36, 34, 30, 36, 34, 38, 37, 39, 32, 18, 34, 38, 36, 38, 33, 34, 32, 32, 33, 38, 36, 38, 38, 38, 38, 39, 38, 39, 36, 39, 39, 39, 37, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 38, 37, 18, 18, 18, 38, 39, 37, 31, 31, 18, 38, 37, 38, 37, 38, 37, 37, 39, 39, 37, 37, 37, 37, 37, 39, 39, 38, 39, 39, 39, 39, 36, 37, 38, 36, 37, 39, 39, 39, 39, 38, 38, 38, 39, 37, 39, 18, 37, 38, 39, 33, 37, 37, 32, 37, 38, 37, 33, 38, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 37, 38, 39, 39, 39, 38, 37, 39, 33, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 26, 37, 39, 39, 38, 38, 39, 39, 39, 39, 37, 38, 37, 38, 38, 38, 39, 38, 37, 37, 38, 36, 39, 33, 38, 39, 39, 38, 39, 39, 38, 38, 39, 38, 35, 35, 34, 36, 37, 37, 38, 38, 37, 34, 35, 38, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 38, 30, 35, 37, 37, 37, 38, 37, 38, 37, 37, 38, 37, 39, 39, 37, 37, 38, 39, 38, 39, 38, 38, 37, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 37, 35, 38, 39, 39, 39, 39, 38, 30, 38, 38, 39, 39, 39, 37, 39, 39, 38, 37, 19, 38, 38, 19, 37, 33, 39, 38, 31, 39, 37, 33, 39, 39, 38, 39, 39, 38, 37, 36, 38, 39, 36, 37, 37, 37, 39, 39, 39, 37, 35, 33, 38, 37, 35, 20, 20, 33, 20, 38, 35, 18, 36, 36, 16, 17, 18, 32, 18, 32, 20, 35, 18, 32, 33, 18, 16, 38, 33, 20, 20, 37, 37, 32, 16, 36, 16, 17, 34, 30, 38, 17, 17, 18, 35, 32, 35, 37, 20, 39, 38, 33, 20, 39, 38, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"CAGGGAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTGCAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTCATCCCCTGCTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 30, 32, 33, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 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33, 37, 37, 33, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQLSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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}, { "name" : "translation", "value" : "EVKLMESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQLSSLKSEDTAMYYCARGPHDDDMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2453 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7658:4127 (reversed)", "sequence" : "CGATGAGGTGCAGGGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGAATTACTACGGTAGTAGCTACGGGCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCATTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 38, 32, 38, 39, 39, 39, 39, 38, 38, 30, 15, 36, 38, 38, 37, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 37, 36, 38, 36, 34, 38, 39, 38, 39, 36, 38, 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37, 38, 19, 37, 30, 31, 29, 30, 38, 36, 34, 37, 37, 39, 38, 39, 39, 36, 38, 38, 37, 37, 38, 39, 38, 39, 39, 39, 38, 32, 39, 38, 37, 39, 37, 38, 39, 38, 39, 39, 39, 39, 38, 38, 36, 18, 37, 37, 32, 38, 39, 39, 36, 32, 39, 39, 39, 39, 39, 38, 38, 36, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 37, 38, 37, 37, 37, 37, 34, 33, 37, 33, 31, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTVVATGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "S76835" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSTYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARITTVVATGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2454 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13856:4127 (reversed)", "sequence" : "TATAGAGGTGAAGCTGATGGAGTCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 37, 38, 39, 39, 37, 38, 36, 36, 32, 37, 34, 36, 34, 38, 38, 37, 38, 39, 38, 36, 17, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 37, 37, 38, 38, 38, 38, 38, 38, 38, 34, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2455 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8985:4129 (reversed)", "sequence" : "ATACCAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGTAAGGCTTCTGGCTACACCTTCACCAGCTACTATATGTACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAACAATGATGGTACTAATTTCAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGCGGCATATGACCCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCCTTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 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37, 37, 37, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYDPKFQGKATITTDTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANDNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWLVRMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : 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37, 33, 33, 33, 33, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPCNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.84%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPCNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2461 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11495:4133 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38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 34, 33, 34, 33, 34 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELLKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCKASSYTFTSYWMNWVKQRPEQGLEWIGRIDPYDSETHYNQKFKDKAILTVDKSSSTAYMQLSSLTSEDSAVYYCARSYDGYYVDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2464 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23101:4134 (reversed)", "sequence" : "GAAGCAGGTCCAGCTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 34, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 33, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 37, 38, 39, 38, 39, 37, 39, 39, 37, 39, 39, 36, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 37, 37, 38, 39, 37, 38, 39, 39, 38, 39, 38, 37, 37, 39, 35, 39, 39, 37, 38, 39, 38, 36, 39, 39, 39, 38, 38, 39, 39, 39, 38, 37, 37, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 36, 37, 38, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 38, 38, 37, 34, 38, 37, 37, 37, 38, 38, 38, 38, 39, 39, 37, 39, 38, 38, 38, 38, 39, 39, 38, 34, 34, 35, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 35, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 37, 35, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 35, 37, 37, 37, 38, 38, 37, 39, 37, 38, 37, 35, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 38, 39, 38, 36, 35, 38, 38, 37, 36, 38, 37, 39, 38, 39, 39, 36, 16, 39, 39, 39, 38, 39, 38, 36, 36, 36, 38, 38, 38, 38, 37, 37, 36, 38, 38, 38, 38, 37, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "25" }, { "name" : "Source-Identity", "value" : "91.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2466 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9881:4135 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGAGTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACCCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTATCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGGCCTTCCTACTATGGTCATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTCATCCATTGAACG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 32, 32, 32, 35, 30, 35, 37, 37, 34, 37, 37, 16, 33, 37, 16, 16, 33, 37, 37, 37, 37, 38, 39, 39, 39, 37, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 37, 37, 17, 35, 38, 39, 39, 39, 37, 39, 15, 37, 30, 36, 38, 39, 14, 33, 37, 39, 33, 33, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 36, 37, 16, 37, 29, 38, 37, 39, 38, 39, 33, 39, 38, 36, 38, 39, 17, 37, 39, 39, 39, 33, 35, 17, 16, 16, 33, 37, 38, 33, 39, 39, 35, 38, 39, 38, 17, 33, 37, 37, 37, 39, 38, 36, 37, 38, 34, 36, 36, 38, 15, 27, 37, 37, 37, 30, 38, 14, 14, 31, 38, 38, 16, 15, 34, 32, 37, 27, 36, 15, 37, 30, 15, 37, 14, 36, 15, 29, 10, 10, 33, 14, 37, 33, 34, 39, 37, 38, 24, 28, 36, 15, 27, 26, 28, 13, 34, 38, 37, 37, 25, 36, 34, 15, 11, 26, 34, 26, 37, 39, 37, 37, 37, 33, 38, 34, 34, 37, 36, 38, 38, 38, 38, 24, 38, 32, 38, 32, 34, 36, 30, 32, 38, 34, 33, 34, 38, 33, 39, 39, 39, 37, 37, 37, 37, 37, 39, 37, 25, 39, 39, 38, 31, 39, 38, 37, 37, 39, 39, 38, 37, 13, 26, 37, 37, 37, 37, 39, 39, 39, 39, 36, 30, 16, 39, 39, 37, 39, 39, 37, 39, 37, 36, 37, 36, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 36, 39, 39, 39, 39, 39, 38, 37, 38, 39, 37, 37, 37, 30, 37, 39, 38, 39, 39, 38, 37, 38, 33, 39, 37, 39, 37, 37, 30, 30, 14, 30, 32, 37, 38, 33, 39, 38, 35, 38, 37, 18, 37, 37, 37, 37, 33, 37, 35, 36, 33, 39, 38, 38, 33, 39, 38, 38, 37, 31, 38, 38, 38, 37, 37, 38, 33, 37, 35, 39, 38, 39, 39, 39, 38, 39, 36, 38, 39, 39, 38, 36, 38, 38, 38, 37, 34, 36, 32, 35, 37, 38, 38, 39, 38, 34, 32, 39, 39, 39, 39, 39, 37, 38, 38, 37, 38, 38, 39, 38, 38, 38, 37, 37, 37, 38, 38, 37, 34, 37, 37, 37, 37, 37, 37, 37, 32, 18, 29, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQSPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISSGGSYP" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPSYYGHTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVATISSGGSYPYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARPSYYGHTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2467 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22189:4135 (reversed)", "sequence" : "TTTCCAGGTTCAACTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCATTGGACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 36, 38, 36, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 36, 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38, 38, 38, 38, 38, 36, 36, 35, 19, 37, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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38, 38, 38, 37, 33, 33, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 32, 38, 38, 37, 34, 37, 37, 37, 33, 33, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVRSGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYAPKFQGKATLTADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPENGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NENYGRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.52%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"CGGCGAGGTGCAGCTTCAGCAGTCTGGAGATGATCCGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGGCAGTACTTACTACAATGAAATGTTCAAGGGCAAGACAACGCTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGATGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTATTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 33, 33, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 20, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 35, 37, 39, 38, 39, 39, 34, 38, 39, 38, 39, 39, 39, 36, 38, 39, 39, 39, 39, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 38, 39, 38, 38, 39, 39, 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39, 38, 38, 36, 38, 36, 38, 38, 38, 37, 34, 33, 32, 33, 35, 31, 32, 35, 30, 30, 32, 18, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDPVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LLVFRCL" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDPVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2237 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11522:3965 (reversed)", "sequence" : "GACGCAGGTGCAGCTGAAGGAGTCTGGGCCTGAACTGGCGAGGCCTGGGGAATCAGTGAAGATTTCCTGCAGGGGTTCCGGCTACACATTCACTGATTATGCTATTCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATCACTACTTATTCTACTAATGCAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGACATCTATTACTGTGCAAGAGGTGGGACAGGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 34, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 37, 38, 39, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 39, 38, 37, 38, 36, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 37, 39, 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32, 33, 33, 33, 35, 32, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELARPGESVKISCRGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSDIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ITTYSTNA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGTGPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "56" }, { "name" : "Source-Identity", "value" : "80.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELARPGESVKISCRGSGYTFTDYAIHWVKQSHAKSLEWIGVITTYSTNANYNQKFKGKATMTVDKSSSTAYMELARLTSEDSDIYYCARGGTGPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2238 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15581:3965 (reversed)", "sequence" : "AATGGAGGTCCAACTGCAACAGTCTGGGCCTGAACTGGCAACACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTACCTACTGGATGCACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATCCATTAATCCTAACACTGATTATACTGACTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCATCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATTACGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCCCTGCTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 31, 37, 33, 33, 37, 37, 37, 38, 38, 38, 38, 34, 38, 33, 33, 33, 33, 37, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 36, 39, 38, 38, 37, 38, 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"GTCCCAGGTCCAACTACAGCAGCCTGGAGCCGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGATTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGTTACTACTAACTACAATGGGAGGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGAGATCATTTTGACCACTGGGGCCCAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCTATCCCCTGAAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 38, 36, 37, 33, 37, 37, 37, 39, 38, 39, 37, 39, 38, 37, 39, 39, 36, 37, 38, 38, 39, 37, 38, 37, 33, 37, 38, 37, 38, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWTGGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VREGAYYGDYDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.66%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : 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"DVHLVESGPGLVAPSQSLSITCTVSGFSLTSYDINWIRQPPGKGLEWLGVIWTGGGTNYNSAFMSRLSISKDNSKSQVLLKMSSLQTDDTPIYYCVREGAYYGDYDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2370 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20803:4059 (reversed)", "sequence" : "GGGGGAGGTTCAGCTCCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTACACTAACTATTTGATAGAGTGGGTAAGGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAATTCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGGCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 30, 35, 33, 33, 37, 37, 37, 38, 38, 38, 38, 37, 34, 38, 37, 37, 37, 38, 39, 39, 34, 38, 39, 39, 39, 39, 37, 33, 37, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 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37, 36, 36, 31, 36, 37, 38, 39, 39, 34, 37, 37, 33, 32, 20, 38, 37, 37, 39, 39, 38, 32, 35, 37, 38, 35, 37, 36, 38, 37, 37, 37, 32, 37, 38, 38, 38, 38, 39, 39, 39, 38, 38, 38, 37, 35, 38, 38, 38, 39, 36, 34, 37, 34, 36, 38, 38, 38, 38, 36, 33, 31, 33, 33, 33, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTAVNVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVRQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAYTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADNSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFGRYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { 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"GCGCCAGGTGCAGCTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATCAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGTCCAGACCTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGTTCTGGTAATTACGAAGGGGGGGCTATGGACTACTGGGGTCAAGGAATCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGCTCATCCCCTGGCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 30, 32, 32, 32, 33, 32, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 34, 39, 34, 36, 37, 36, 37, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 36, 39, 37, 39, 35, 39, 37, 38, 39, 39, 39, 39, 38, 38, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 16, 37, 36, 38, 33, 38, 39, 39, 38, 39, 37, 31, 36, 38, 37, 33, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 36, 30, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 39, 39, 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38, 38, 38, 33, 16, 16, 38, 32, 32, 35, 32, 32, 32, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGISVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASSGNYEGGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : 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{ "name" : "translation", "value" : "GG" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AY392864" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYVQTFQGKATITADTSSNTAYMQLSSLTSEDTAVYYCASSGNYEGGAMDYWGQGISVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2373 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18806:4063 (reversed)", "sequence" : 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"CGGGAGGTGAAGCTGGTGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTATATATACTGGGTGAAGCAGAGGCCTGGACAAGGCCCTGAGTGGATTGGAGAGATTAATCCTACCAATGGTGATAATAACTTCATTGAGAAGTTCAAGAACAGGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCAAACATTCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGCCTATTACTGTACAAGAGGACGCAAGTGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTTCATCCCTTGCAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 32, 32, 37, 37, 37, 38, 37, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 37, 37, 39, 39, 38, 39, 39, 39, 39, 36, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 4, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWVKQRPGQGPEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFIEKFKNRATLTVDKSSSTANIQLSSLTSEDSAAYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPTNGDN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 322, "max" : 354, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRKWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 4, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "47" }, { 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"value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 4, "max" : 354, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVKPGASVKLSCKASGYTFTSYYIYWVKQRPGQGPEWIGEINPTNGDNNFIEKFKNRATLTVDKSSSTANIQLSSLTSEDSAAYYCTRGRKWDFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2376 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17299:4065 (reversed)", "sequence" : "ATGCGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCGAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGCCTAACTGGGCGAGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCGCAGCCAAAACGACACCCCCATCTGCCTATCCCTTGCGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 32, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 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], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSGYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAENTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASLTGRDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.68%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "80.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFTFSGYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAENTLYLQMSSLRSEDTAMYYCASLTGRDYWGQGTTLTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2377 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9578:4065 (reversed)", "sequence" : "CTCTGAGGTGCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCGAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACGGGACTACGTAATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCCTTGATAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 37, 38, 39, 37, 39, 37, 37, 39, 39, 39, 38, 39, 39, 38, 38, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDYVMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.16%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TVTTFPVDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "TVT" }, { "name" : "IMGT_allele", "value" : "IGHD4-17*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-17" }, { "name" : "Source-Sequence", "value" : "AF062181" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRDYVMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2378 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21455:4066 (reversed)", "sequence" : "TGAGGAGGTGATGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGATCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 32, 35, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19951:4084 (reversed)", "sequence" : "ATGTGAAGTGAAGCTGGTGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGATACTATAGGTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 36, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 37, 37, 39, 39, 39, 39, 38, 39, 37, 38, 38, 37, 38, 38, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 25, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 38, 38, 39, 39, 39, 38, 39, 38, 37, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 37, 33, 38, 38, 38, 34, 32, 36, 37, 38, 37, 17, 39, 37, 33, 37, 35, 17, 39, 39, 39, 37, 36, 38, 36, 36, 34, 14, 38, 38, 38, 39, 39, 37, 38, 38, 19, 38, 33, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 19, 37, 39, 35, 37, 37, 39, 39, 39, 39, 39, 38, 33, 39, 39, 37, 37, 37, 18, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 36, 39, 39, 38, 37, 37, 39, 38, 39, 36, 36, 35, 34, 38, 38, 32, 38, 38, 38, 39, 36, 38, 38, 38, 37, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 33, 33, 33, 37, 37, 33, 32, 30, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGASVTLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRYYRYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYRYPYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YYRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGASVTLSCKASGYTFTDYEMHWVKQTPVHGLEWIGAIDPETGGTAYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYCTRYYRYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2396 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20043:4084 (reversed)", "sequence" : "AGCACAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCAATATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCCTTATTACTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCTATCCCTTGTAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 18, 32, 37, 37, 33, 37, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 19, 19, 36, 36, 36, 35, 32, 38, 38, 37, 39, 33, 37, 37, 20, 20, 20, 37, 37, 37, 33, 32, 36, 36, 36, 38, 37, 39, 39, 18, 37, 32, 18, 38, 38, 32, 33, 38, 37, 35, 38, 37, 35, 32, 17, 18, 20, 17, 30, 37, 37, 38, 31, 37, 18, 37, 36, 37, 37, 31, 38, 19, 37, 38, 38, 36, 39, 37, 37, 37, 17, 37, 38, 32, 34, 38, 39, 39, 39, 39, 38, 19, 37, 37, 37, 37, 16, 38, 38, 34, 37, 38, 39, 39, 39, 18, 34, 32, 36, 38, 39, 36, 39, 39, 39, 19, 36, 14, 30, 33, 33, 37, 38, 39, 33, 34, 38, 38, 38, 33, 38, 35, 38, 39, 39, 37, 37, 33, 38, 38, 26, 24, 26, 37, 38, 38, 26, 39, 39, 31, 33, 32, 32, 16, 37, 33, 37, 37, 38, 24, 37, 29, 34, 27, 34, 38, 28, 37, 26, 23, 38, 39, 36, 15, 24, 27, 34, 36, 38, 33, 34, 26, 15, 24, 32, 14, 24, 39, 23, 36, 38, 34, 2, 2, 25, 11, 11, 24, 37, 34, 26, 15, 34, 25, 2, 25, 24, 26, 34, 36, 37, 30, 34, 24, 37, 38, 14, 33, 37, 2, 15, 16, 16, 25, 35, 27, 15, 34, 32, 33, 33, 37, 27, 16, 15, 33, 39, 37, 32, 39, 38, 34, 31, 16, 17, 37, 37, 38, 33, 37, 38, 16, 29, 33, 37, 39, 38, 39, 39, 33, 14, 35, 14, 32, 33, 37, 38, 19, 38, 37, 30, 33, 30, 15, 36, 32, 37, 38, 37, 18, 33, 37, 36, 38, 37, 37, 37, 32, 14, 37, 36, 37, 35, 33, 39, 39, 39, 38, 32, 37, 39, 37, 33, 18, 18, 18, 18, 37, 19, 39, 38, 36, 16, 31, 38, 33, 37, 39, 37, 37, 38, 38, 37, 32, 37, 38, 37, 34, 38, 37, 20, 33, 37, 33, 17, 39, 39, 37, 38, 34, 39, 38, 34, 37, 38, 34, 36, 17, 37, 38, 36, 32, 36, 18, 36, 36, 36, 38, 38, 39, 38, 37, 37, 32, 38, 20, 36, 32, 38, 37, 37, 32, 33, 33, 37, 37, 37, 32, 29, 18, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKANITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "APYYYGSSQFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKANITADTSSNTAYLQLSSLTSEDTAVYYCAPYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2397 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10165:4084 (reversed)", "sequence" : "TTGGGATGTGCAGCTTCAGGAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAAATGTCCTGCAAGGCTTCTGGCTACAGGTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTTATCCTGGAAATGGTGATACTAGCTACAACCAGAAGTCCAAGGACAAGGCCAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAGAAGAAGCGATTATGGAAAAAAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCCGCCAAAACAACACCCCCATCGGTCTATCCCCTGCGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 37, 39, 39, 38, 39, 39, 39, 36, 38, 38, 39, 38, 39, 38, 39, 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"AACAGAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGATCTACTATGATTACGACGGAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTCCATCCCTTGACAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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38, 38, 37, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 38, 37, 39, 38, 38, 37, 38, 38, 38, 39, 38, 38, 38, 36, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESAAELARPGASVKMSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GNTFTHYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKFKDKTTLTTDKSSSTAYLQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRENYDYDGDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 329, "direction" : "Right", "truncatedMin" : false, 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"value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVKPGASVKLSCAASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTRPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2435 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23219:4114 (reversed)", "sequence" : "ATCCGAGGTTCAGCTTCAGCAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGAGGGGCTGCATACACTACAGTGGTATCACTGTCTACAACCCATCTCTCAGAAGTCGAATCTCTATCGCTCGAGACACATCCAAGAGCCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATTCGCTGGGACCCCCTATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCCTGTATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 34, 33, 34, 32, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 38, 36, 38, 33, 36, 38, 37, 37, 39, 39, 38, 38, 38, 38, 36, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 39, 37, 14, 37, 37, 37, 37, 38, 38, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 39, 37, 39, 38, 39, 39, 37, 34, 34, 38, 37, 39, 37, 39, 37, 37, 37, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 37, 38, 39, 38, 39, 37, 37, 37, 37, 38, 38, 38, 36, 39, 34, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 37, 39, 38, 35, 33, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 39, 37, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 38, 37, 39, 39, 37, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 39, 38, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 37, 39, 37, 39, 36, 38, 36, 37, 38, 18, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 37, 39, 36, 38, 35, 37, 32, 36, 38, 38, 39, 38, 38, 39, 39, 38, 37, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 36, 38, 38, 38, 38, 36, 36, 37, 38, 38, 38, 38, 33, 32, 33, 33, 37, 37, 37, 32, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWRGC" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYNPSLRSRISIARDTSKSQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFAGTPYTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWRGCIHYSGITVYNPSLRSRISIARDTSKSQFFLQLNSVTTEDTATYYCARFAGTPYTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2436 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9107:4114 (reversed)", "sequence" : "TGGTGAGGTGAAGCTGATGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGGTCTACTATGGTAACCCCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCTTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 33, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 19, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 36, 36, 38, 38, 39, 39, 39, 38, 39, 39, 38, 16, 37, 38, 36, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 23, 39, 39, 38, 38, 38, 39, 37, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 38, 38, 39, 39, 32, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 38, 38, 39, 37, 38, 38, 39, 37, 38, 39, 38, 38, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 38, 35, 36, 15, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 38, 39, 38, 39, 38, 39, 39, 38, 38, 39, 38, 39, 39, 37, 37, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 39, 39, 37, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 38, 39, 36, 37, 37, 39, 37, 37, 37, 36, 35, 36, 38, 37, 38, 38, 39, 39, 39, 37, 38, 38, 39, 38, 38, 36, 36, 35, 36, 37, 39, 36, 35, 37, 38, 36, 36, 33, 38, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 38, 36, 37, 38, 39, 37, 38, 38, 37, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVYYGNPYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "82.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREGVYYGNPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2437 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17815:4115 (reversed)", "sequence" : "AGATGAGGTCCAGCTGCAACAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCTTGTGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 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36, 38, 38, 39, 38, 37, 38, 38, 38, 38, 37, 37, 38, 37, 37, 32, 33, 33, 37, 37, 37, 33, 33, 32, 30, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"ERR346596.2438 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12525:4115 (reversed)", "sequence" : "TGGGGAGGTCCAGCTTCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAAAGCCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGCAACTACCTACAACCAGAATTTCAAGGACAAGGCCAGCTTGACTGTAGATAAGTCCTCCAGCACAGCCTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCTTGGGATTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGGCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSWDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.68%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHVKSLEWIGRINPYNGATTYNQNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYCARSWDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2439 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9582:4116 (reversed)", "sequence" : "CTCCCAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGAAAGATTTATCCTGGAGATGGTGATACTAACTACAATGGCAATTTCAAGGATAAAGCCACATTGACTACAGACAAGTCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTATCATCTGAGGACTCTGCGCTCTATTTCGGGGCAAGAGGGGGGAATCTAACTGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCATTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : 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"translation", "value" : "ARGGNLTGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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"translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSFSGYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAASGFSFSGYGMSWVRQTPDKRLEWVATIGVGGTYTYYSDSVKGRFTISRDNAKNTLYLRMSSLKSEDTAMYYCARPFTTVVATVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2521 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17436:4178 (reversed)", "sequence" : "CTCGCAGGTTCAGCTTCAGCAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGGCTTTATTACTACGGTAGTAGCTCAAACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 30, 37, 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"type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGLYYYGSSSNFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" 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370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARGLYYYGSSSNFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2522 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23112:4180 (reversed)", "sequence" : "CAAAGAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGAGTCCCTGAAATTTTCCTGTGAATCCAATGAATACGAATTCCCTTCCCATGACATGTCTTGGGTCCGCAAGACTCCGGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTGATGGTGGTAGCACCTACTATCCAGACACCATGGAGAGACGATTCATCATCTCCAGAGACAATACCAAGAAGACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCTTGTATTACTGTGCAAGACTCACTATGGTTACGTGGAAAATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCCTTGGCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 16, 29, 32, 34, 37, 32, 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"sequence" : "GTAGGAGGTGCAACTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCACCTCAGCCAAAACAACACCCCCATCTGCTCATCCACTGTCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 16, 32, 32, 37, 37, 32, 32, 30, 37, 37, 34, 38, 38, 38, 33, 16, 33, 16, 37, 38, 39, 39, 39, 39, 39, 39, 34, 15, 15, 14, 14, 32, 32, 37, 16, 38, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 33, 39, 14, 14, 36, 39, 37, 34, 38, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 33, 36, 38, 37, 39, 39, 14, 37, 39, 39, 39, 39, 16, 38, 39, 39, 36, 39, 36, 38, 39, 39, 39, 33, 33, 37, 37, 39, 39, 38, 16, 37, 38, 33, 39, 39, 39, 29, 37, 17, 38, 39, 36, 30, 38, 39, 39, 36, 30, 38, 38, 38, 39, 32, 37, 39, 39, 38, 38, 30, 34, 38, 39, 38, 32, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 38, 39, 38, 15, 32, 12, 12, 34, 12, 27, 37, 38, 39, 15, 33, 38, 33, 38, 39, 24, 38, 38, 38, 37, 38, 39, 15, 28, 35, 15, 15, 37, 38, 34, 26, 34, 34, 38, 26, 15, 25, 34, 34, 15, 34, 36, 38, 37, 38, 39, 39, 37, 38, 38, 38, 38, 38, 31, 32, 15, 26, 31, 26, 37, 37, 37, 37, 39, 38, 33, 15, 38, 33, 35, 33, 33, 32, 37, 37, 37, 37, 15, 37, 36, 39, 38, 37, 37, 37, 37, 37, 37, 37, 27, 24, 24, 29, 33, 37, 37, 38, 37, 38, 38, 37, 16, 38, 37, 37, 33, 33, 39, 38, 34, 37, 35, 37, 37, 38, 37, 38, 38, 38, 37, 16, 29, 16, 29, 37, 39, 38, 38, 38, 37, 38, 35, 38, 35, 37, 38, 37, 39, 38, 38, 37, 37, 35, 37, 37, 38, 35, 30, 38, 38, 34, 34, 39, 37, 37, 37, 37, 37, 37, 37, 37, 17, 33, 37, 36, 36, 36, 14, 16, 37, 31, 17, 39, 39, 39, 39, 37, 37, 37, 37, 38, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 37, 39, 37, 37, 16, 37, 17, 16, 38, 39, 38, 38, 38, 39, 37, 37, 15, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 38, 38, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 16, 37, 37, 37, 37, 37, 37, 37, 31, 37, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVTS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFTFSDFYMFWFRQTPEKRLEWVATISNGGTYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVTS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2529 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11850:4185 (reversed)", "sequence" : "CATTCAGGTTCAGCTCCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCAACTCTCAAATCCAGACTGAGCATCAGCAAGGACAGCTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACATGATACTACGGTTGTAGTCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGTCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 34, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 37, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 36, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 38, 38, 38, 37, 37, 37, 38, 37, 37, 37, 38, 33, 35, 38, 32, 27, 32, 35, 30, 37, 38, 36, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 38, 38, 39, 38, 38, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 39, 39, 39, 36, 38, 39, 37, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 37, 38, 37, 37, 39, 38, 39, 39, 38, 37, 37, 33, 38, 38, 39, 39, 39, 39, 37, 38, 38, 38, 37, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 37, 36, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 34, 38, 38, 36, 38, 39, 39, 39, 37, 34, 36, 36, 36, 36, 37, 39, 39, 39, 38, 39, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 37, 37, 35, 39, 39, 32, 36, 36, 34, 37, 36, 32, 35, 39, 39, 36, 32, 39, 39, 38, 37, 39, 36, 37, 36, 37, 38, 38, 39, 38, 38, 38, 36, 36, 38, 38, 38, 38, 34, 32, 31, 33, 33, 33, 32, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSTLKSRLSISKDSSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKHDTTVVVDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.81%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGITYYNSTLKSRLSISKDSSKSQVFLKMNSLQTDDTAMYYCAKHDTTVVVDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2530 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13562:4187 (reversed)", "sequence" : "TTAAGAGGTGCAGCTTCAGGAGTCTGGACCTGAACTGGTGAAGCCTGGGGCCTCAGTGAAGATCTCCTGCACAGGTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTCCAATGGGAGGTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAGATCTGCATACTACGGTAGTAGTTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGAATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 30, 32, 37, 37, 32, 37, 32, 37, 37, 38, 38, 16, 37, 33, 16, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 14, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 36, 39, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 36, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 16, 34, 38, 39, 38, 37, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 37, 37, 39, 39, 37, 38, 38, 34, 38, 37, 39, 33, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGNYAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2537 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38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 37, 34, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGPVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGPVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSTLMSRLTISKDNSKSQVFLKMNSLQTDDTAMYYCARYYYGFLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2538 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10164:4190 (reversed)", "sequence" : "GTACGAGGTGCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGAAGGCTATGGTTACGACGAAAGGGGTCATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCACTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 18, 32, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 39, 38, 31, 34, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 38, 39, 39, 39, 38, 38, 14, 33, 37, 36, 37, 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38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 37, 37, 37, 37, 35, 33, 37, 33, 32, 29, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGYGYDERGHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", 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14, 33, 37, 14, 14, 14, 30, 36, 37, 37, 16, 16, 16, 29, 16, 27, 16, 37, 38, 15, 37, 16, 16, 17, 31, 29, 17, 17, 17, 17, 31, 31, 15, 31, 14, 17, 15, 31, 16, 16, 16, 16, 14, 14, 28, 32, 37, 39, 38, 16, 14, 16, 30, 35, 34, 16, 29, 14, 14, 27, 16, 16, 29, 38, 28, 26, 16, 27, 29, 27, 27, 34, 32, 36, 36, 36, 37, 32, 13, 27, 32, 34, 11, 26, 32, 25, 34, 37, 15, 15, 23, 15, 13, 34, 37, 14, 34, 38, 38, 39, 37, 34, 38, 13, 34, 14, 22, 26, 15, 39, 34, 26, 37, 34, 34, 34, 37, 15, 37, 34, 37, 32, 15, 27, 27, 13, 34, 27, 14, 14, 15, 15, 35, 28, 15, 28, 15, 28, 27, 16, 29, 16, 27, 27, 27, 12, 12, 12, 12, 14, 34, 37, 30, 16, 16, 16, 16, 37, 30, 30, 16, 16, 38, 31, 17, 16, 17, 27, 16, 15, 29, 14, 27, 27, 14, 27, 27, 16, 27, 16, 16, 38, 16, 37, 33, 14, 15, 15, 14, 14, 36, 30, 14, 14, 14, 14, 33, 16, 17, 33, 17, 17, 31, 16, 39, 39, 38, 37, 33, 17, 37, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 37, 36, 38, 32, 14, 14, 14, 16, 38, 39, 39, 38, 38, 16, 38, 36, 36, 37, 37, 15, 33, 39, 39, 38, 37, 17, 37, 15, 39, 38, 38, 38, 38, 36, 15, 38, 36, 37, 37, 38, 38, 38, 38, 35, 37, 16, 38, 38, 37, 32, 32, 32, 30, 32, 35, 32, 32, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGKGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATLTVDTSSSTAYMQFSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ICC*NGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSCGAYGYDGGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 377, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGASVKVSCKASGYSFTSYFIHWVKQRPGKGLEWIGYICC*NGGTNYNQKFKGKATLTVDTSSSTAYMQFSSLTSEDSAVYYCARSCGAYGYDGGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2547 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13897:4194 (reversed)", "sequence" : "GCCCGAGGTGCACCTGGTGGAGTCTGGGGGAGACTTAGTGTACCCTGGAGGGTCCCTAAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTTCCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACACGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGCACTAACACCTATTATCCAGACAGTATGAAGGGGCGATTCACCATCTCCCGAGACAATGCCAAGAACACCCTATACCTGCAAAAGAGCAGTCTGAGGTCTGAGGACACAGCCATGTATTACTGTACAAGACGGGGAATTTACGACGAGAGGACTGCTATGGACTACTGGGGTCGAGGAACCTCAGTCACCGTCTCCTCGGCTACAACAACAGCCCCATCGGCTTATCCCTTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 35, 35, 32, 30, 37, 34, 37, 38, 38, 38, 15, 32, 32, 32, 38, 37, 39, 39, 39, 38, 39, 37, 36, 30, 14, 36, 34, 34, 33, 38, 39, 38, 39, 39, 35, 37, 38, 39, 39, 39, 39, 37, 37, 37, 38, 38, 36, 38, 38, 39, 39, 36, 37, 39, 39, 39, 39, 39, 38, 39, 39, 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34, 33, 31, 18, 19, 18, 18, 33, 19, 37, 19, 38, 37, 31, 38, 39, 37, 35, 36, 36, 36, 36, 32, 36, 20, 39, 39, 39, 37, 38, 37, 18, 37, 38, 32, 38, 38, 37, 38, 36, 30, 38, 39, 36, 32, 36, 32, 17, 36, 33, 37, 38, 37, 38, 34, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 33, 34, 37, 32, 33, 33, 32, 32, 37, 33, 33, 32, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVYPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDTRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSMKGRFTISRDNAKNTLYLQKSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGRGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGIYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "25" }, { "name" : "Source-Identity", "value" : "91.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVYPGGSLKLSCAASGFTFSSYGMSWVRQTPDTRLEWVATINSGGTNTYYPDSMKGRFTISRDNAKNTLYLQKSSLRSEDTAMYYCTRRGIYDERTAMDYWGRGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2548 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9510:4195 (reversed)", "sequence" : "CTTGGAGGTGCAGCTGCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAAATGTCCTGCAAGGCTTCTGGCTACAGGTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTTATCCTGGAAATGGTGATACTAGCTACAACCAGAAGTTCAAGGACAAGGCCAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAGAAGAAGCGATTATGGAAAAAAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCCGCCAAAACAACACCCCCATCGGCCTATCCCCTGAGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 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"sequence" : "TGTTGAGGTGAACTGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGCAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 37, 37, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 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37, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 4, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "*GELVESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 328, "max" : 360, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : 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"TTATCAGGTCCAGCTTCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCACTGATAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 37, 39, 38, 39, 39, 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39, 38, 38, 36, 38, 38, 38, 39, 36, 36, 37, 36, 38, 38, 38, 38, 37, 37, 34, 33, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IPPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKASGYTFTSYWINWIKQRPGQGLEWIGRIPPGSGTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARGSYYYGSSSPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2554 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15259:4197 (reversed)", "sequence" : 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"AATTGAGGTGATGTTGGTGGAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCCGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAGCTACAGTGGTAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAAAGGGACTCCGTATGGTAACTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCCTATCCATTGTTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 37, 37, 32, 37, 37, 35, 38, 38, 37, 38, 36, 37, 38, 38, 34, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 37, 38, 39, 39, 39, 39, 39, 36, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 34, 39, 39, 39, 38, 33, 37, 37, 36, 38, 14, 27, 36, 37, 39, 36, 38, 38, 38, 39, 39, 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38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRPFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKGTPYGNSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF PGNKLEWMGYMSYSGSTRYNPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-2" }, { "name" : "Videntity", "value" : "96,93% (284/293 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"codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRPFPGNKLEWMGYISYSGSTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAKGTPYGNSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2486 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9879:4152 (reversed)", "sequence" : "GTCTGAAGTGAAGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAAAAACTATGGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCCCTGGTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 36, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 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36, 36, 37, 36, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 34, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2487 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7402:4154 (reversed)", "sequence" : 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"GCAGGAGGTCCAACTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCGTCTGGATACACATTCACTGACTATATTATAAGCTGGGTGAAGCAGAGAGTTGGACAGGGCCTTGAGTGGATTGGAGAGATTCATCCTGGAACTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCATAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAAGGAAGAATGGCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCGGCCCATCCACTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 37, 39, 36, 38, 38, 38, 38, 39, 37, 38, 39, 39, 36, 20, 35, 38, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 38, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 37, 18, 37, 34, 36, 38, 39, 39, 39, 39, 39, 39, 38, 38, 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37, 37, 37, 33, 31, 33, 31, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISWVKQRVGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { 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"QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTPDKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2500 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16317:4169 (reversed)", "sequence" : "TACCCAGGTCCAGCTGCAGCAATCTGGGACTGTGCTGGCAAGGCCAGGGGCTTCATTGAGGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAATGATGCCAAATACACCCAGAAGTTCAAGGCCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCGACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTGCAAGAAACTGGGACTGGGTGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTCATCCCTTGCGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 36, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 37, 37, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 39, 36, 38, 38, 38, 39, 38, 39, 36, 38, 39, 39, 38, 39, 39, 36, 37, 39, 38, 39, 39, 38, 39, 39, 39, 37, 37, 37, 38, 33, 39, 39, 34, 39, 37, 39, 39, 36, 39, 36, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 37, 38, 37, 34, 34, 37, 33, 33, 33, 35, 31, 33, 33, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPGNNDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWDWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGTVLARPGASLRMSCKASGYTFTNYWINWIKQRPGQGLEWIGAIYPGNNDAKYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYCARNWDWVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2501 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23819:4169 (reversed)", "sequence" : "AGGGGAAGTGATGTTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTACAAGACGGGGGAGGTACGACGAAAGGAGTGATATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTCCATCCCTTGCGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 32, 34, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 36, 38, 38, 37, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 20, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 39, 38, 37, 36, 37, 32, 36, 33, 37, 34, 33, 38, 37, 39, 38, 33, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 33, 35, 38, 38, 38, 37, 37, 37, 37, 36, 37, 32, 33, 33, 33, 33, 33, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGRYDERSDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAASGFTFSTYGMSWVRQTPDKRLEWVATINSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRRGRYDERSDMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2503 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13230:4170 (reversed)", "sequence" : "CATGGAGGTGCAGCTGGTGGAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACAAATTCACTGACTATGAGATGCACTGGGTGGAACAGACACCTGTGCATGGCCTGGAATGGATTGGATCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAACTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCACCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGAGAAGGGATCTACTTTGGTTACGACGTACCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCATCGGTCCATCCCCTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 32, 32, 30, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 36, 37, 38, 39, 39, 38, 39, 39, 38, 39, 37, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 38, 39, 37, 38, 37, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 37, 37, 37, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"EVQLVESGGGLVQPGGSLRLSCTTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"name" : "translation", "value" : "ARDYSGYFDF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" 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"intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCTTSGFTFTDYFMTWVRQPPGKALEWLGFIRNKPNGYTTEYNPSVKGRFTIARDNSQGILYLQMNTLRAEDSAIYYCARDYSGYFDFWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2515 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14399:4176 (reversed)", "sequence" : "CAGGGATGTGCAGCTTCAGGAGTCTGGACCTGAGCTAGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGTTACTACATGCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAGTTGTTACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTTACTGTAGACACATCCTCCAGCACAGCCTACATGCAGTTCAACAGCCTGACATCTGAAGACTCTGCGGTCTATTACTGTGCAAGATCTTGCGGGGCTTATGGTTACGACGGGGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCCCTGATTC", "circular" : false, "sequenceType" : "Nucleotide", 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"translation", "value" : "DVQLQESGPELVKTGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISCYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"AGGTGAGGTGCAGCTGCAGCAGTCTGGGACTGTGCTGCCAAGGCCTGGGACTTCCGTGAGGATGTCCTGCAAGGCTTCTGGCTACAGTTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTATTTATCCTGGAAATAGTGAAATTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAATTTATAGATACGACGAGGATGCTATGGACTATTCGGGTCAAGGCACCTCAGTCCCCGTCCCCTCAGCCAAAACAACACCCCCATCGGTCTATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 16, 37, 37, 37, 37, 16, 37, 37, 32, 38, 38, 16, 38, 38, 38, 38, 38, 38, 39, 39, 37, 33, 34, 15, 15, 37, 37, 38, 16, 16, 16, 35, 16, 32, 15, 33, 16, 32, 37, 34, 14, 16, 37, 34, 37, 15, 32, 32, 32, 38, 33, 36, 37, 14, 32, 36, 15, 16, 33, 16, 33, 37, 17, 38, 36, 33, 15, 38, 38, 14, 38, 38, 39, 33, 39, 35, 33, 38, 39, 35, 15, 35, 37, 38, 37, 39, 35, 31, 36, 37, 31, 33, 37, 39, 37, 39, 39, 33, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 36, 38, 38, 39, 39, 33, 38, 39, 34, 38, 37, 38, 32, 38, 38, 39, 39, 39, 39, 38, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKVSGYTFTTYYLHWVKQRPGQGLEWIGWIYPGDLNTKYNEQFKATATLTADKSSSTAYMQLSSLTSEDSAVYFCVREDYGSVSFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2647 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"ERR346596.2477 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17092:4147 (reversed)", "sequence" : "ATATGAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCCCTGTACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 30, 38, 37, 37, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 37, 39, 39, 39, 39, 38, 37, 38, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 15, 38, 37, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 38, 38, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 36, 36, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDISWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2478 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19709:4147 (reversed)", "sequence" : "CATGGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCCTATGATTACGACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTCATCCCCTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 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39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 38, 37, 39, 38, 38, 35, 38, 39, 36, 37, 32, 34, 32, 38, 39, 39, 38, 37, 39, 39, 38, 33, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 31, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYDYDYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSYDYDYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2479 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16079:4148 (reversed)", "sequence" : "AGAACAGGTTCAGCTGCAACAGTCAAGAACTGAGCTGGCAAACCCAGGGTCGTCAGAGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTAACTACTGGATACACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTTATCCTGGCACTGGTTATACTGACTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCGACTGAGGAGCCGTACACCTGAGTACGCGGAAGTCTATGACTATGCAAGTGGGCTTAGCGGGGACTGGGTTGCTTACTGGGGCCAAGGGACCCTGGTCACAGTCTCTGCAGCCAAAACGACACCCCCATCAGCTCATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 16, 34, 37, 32, 37, 33, 37, 37, 38, 38, 38, 38, 34, 38, 16, 33, 38, 38, 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"GCCAGAGGTTCAGCTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGCAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGATATTAGTTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGTACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATCAACGGCTACGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGGCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 37, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 37, 36, 39, 20, 32, 37, 38, 38, 39, 39, 37, 39, 39, 39, 34, 36, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 20, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 37, 38, 39, 33, 38, 38, 39, 38, 39, 39, 37, 39, 37, 37, 39, 39, 36, 39, 39, 39, 39, 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33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVQISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSTATGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVQISCKASGYSFTGYYMYWVKQSHGKSLEWIGRVNPNNGDISYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARSTATGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2617 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15339:4252 (reversed)", "sequence" : "GTGGGAGGTCCAGCTGCAACAGTCAGGACCTGGCCTGGTGGTGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTCCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTTATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCACTAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGATCGGTACTATGATTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCATTGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 33, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 32, 33, 33, 33, 35, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVVPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFPLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRYYDYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVVPSQSLSITCTVSGFPLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCARDRYYDYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2618 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21313:4252 (reversed)", "sequence" : 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"sequence" : "GAGTGAGGTTCAGCTTCAGCAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTGCCTGGAAGTGGTAGTACTCACTACCATGAGAAGTTCAAGGACACGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGGGGGGTATGATACCTCCATTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCCATCCCCTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 33, 35, 37, 37, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 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38, 38, 37, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYHEKFKDTATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGYDTSIFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "STG" }, { "name" : "IMGT_allele", "value" : "IGHD4-23*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-23" }, { "name" : "Source-Sequence", "value" : "AF062114" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "75.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTHYHEKFKDTATFTADTSSNTAYMQLSSLTSEDSAVYYCARGGYDTSIFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2624 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20682:4256 (reversed)", "sequence" : "TGGAGATGTGCACCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCAGTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCCGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGGACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCACTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 19, 33, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 35, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 37, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 36, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 14, 17, 38, 39, 30, 38, 33, 33, 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37, 33, 37, 37, 37, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGPGLVAPSQSLSISCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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"Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : 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"GGGTGAGGTGAAGCTTCAGGAATCTGGGGCAGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAGGGCTTCTGGCTACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAGTACAAACTATGATGCTACTACCTACAACCAGAAGTTCAAGGGAAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGTCTACATGGAGCCACGCAGCCTTTCTGCTGAGGACACTTCAGTCAATTACTGTGCAAGAGGCCACTATGTTAGCTATTACTTGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTTCATCCATTGGTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 16, 16, 16, 29, 37, 37, 37, 16, 16, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 16, 33, 38, 37, 39, 39, 15, 32, 36, 32, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 16, 35, 38, 39, 39, 39, 39, 38, 38, 38, 32, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 16, 37, 38, 39, 39, 39, 39, 37, 16, 38, 38, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 34, 38, 39, 33, 16, 16, 31, 37, 38, 39, 15, 33, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 15, 33, 33, 38, 39, 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36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 33, 32, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELMKPGASVEISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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33, 35, 33, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISWVKQRVGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVKPGASVKMSCKASGYTFTDYIISWVKQRVGQGLEWIGEIYPGTGSTYYNEKFKGKATLTADKSSNIAYMQLSSLTSEDSAVYFCARRKNVWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2630 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19300:4259 (reversed)", "sequence" : "ATTTGAGGTGAAGCTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCATGGTGGTGGTACCACCTACTATTCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATTTATTACTGTACAAGACATGGTGGTTACTACCCTTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCTTGGTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 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: 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISHGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRHGGYYPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.54%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2631 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22110:4260 (reversed)", "sequence" : "ATGACAGGTGCAGCTGAAGGAGTCTGGACTTGAGCTGGTGAAGTCTGGGGTTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACTTTCACTGACAATTACATGAAGTGGGTGAAACAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCACCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGAGAAATACAGCCAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAACCGACACCCCCATCAGTTCATCCACTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 29, 32, 37, 37, 32, 37, 37, 37, 37, 38, 38, 38, 16, 33, 38, 38, 16, 33, 37, 38, 39, 39, 33, 38, 16, 15, 16, 16, 33, 16, 37, 16, 32, 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDNY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKYSQAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSHPDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YSH" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AY392875" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGLELVKSGVSVKMSCKASGYTFTDNYMKWVKQSHGKSLEWIGDINPNNGDTFYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYCAREKYSQAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2632 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20137:4261 (reversed)", "sequence" : "CACCCAGGTCCAGCTTCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAACGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGATGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 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"IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLDWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVNYRYGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2568 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10185:4212 (reversed)", "sequence" : "TGCTCAGGTTCAGCTGCAGCAATCTGGGGCTGAGCTGGTAAGACCTGGGCATTCAGTGACGGTGTCCTGCAAGGGTTCTGGCTACGCCTTCACTAGTTACTTGATCGGGTGGGTAAAGCAGAGGCTTGGACGGAGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACAATGACAGCAGACAAATCCTCCTGCACTGCCTACATGCAGTTTAGCAGCCTGACATATGATGACTCTGCTGTTTATTTCTGGGCAAGTGCGATTACGGATGCTATTGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTAAAACGACACCCCCATCTGCTCATCCATTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 16, 29, 16, 35, 37, 37, 37, 37, 37, 37, 18, 38, 38, 38, 34, 16, 37, 16, 38, 16, 33, 38, 35, 38, 39, 15, 15, 33, 36, 37, 38, 15, 38, 39, 39, 39, 39, 16, 37, 16, 16, 33, 37, 39, 32, 15, 14, 14, 15, 15, 33, 38, 39, 32, 38, 35, 16, 16, 14, 32, 33, 14, 32, 37, 38, 39, 39, 39, 39, 16, 16, 37, 30, 15, 15, 33, 37, 39, 39, 16, 33, 38, 37, 14, 36, 38, 36, 37, 39, 39, 39, 37, 39, 16, 33, 37, 17, 17, 33, 17, 33, 16, 33, 16, 29, 14, 29, 30, 29, 14, 14, 30, 16, 33, 29, 17, 37, 16, 33, 15, 14, 30, 27, 14, 33, 14, 14, 38, 16, 14, 14, 14, 14, 29, 14, 15, 27, 31, 16, 30, 27, 16, 14, 16, 30, 30, 13, 15, 30, 30, 16, 15, 16, 27, 28, 29, 28, 16, 28, 27, 33, 37, 26, 16, 27, 12, 38, 39, 38, 37, 26, 15, 27, 28, 35, 38, 34, 28, 15, 13, 38, 39, 39, 39, 15, 15, 2, 15, 34, 15, 15, 25, 20, 38, 39, 39, 15, 14, 26, 38, 13, 14, 15, 15, 15, 13, 21, 27, 2, 2, 11, 24, 33, 37, 35, 24, 37, 29, 16, 37, 39, 38, 33, 37, 37, 37, 37, 33, 2, 2, 2, 2, 30, 3, 14, 16, 24, 24, 37, 33, 37, 26, 16, 39, 38, 33, 37, 37, 24, 17, 16, 16, 14, 15, 31, 15, 15, 16, 17, 17, 17, 17, 33, 17, 17, 17, 33, 33, 16, 37, 16, 30, 15, 33, 15, 15, 15, 16, 16, 16, 16, 33, 16, 33, 15, 14, 14, 16, 33, 16, 37, 29, 38, 36, 29, 14, 32, 38, 39, 36, 30, 33, 29, 14, 33, 33, 17, 38, 33, 16, 17, 31, 37, 17, 39, 39, 39, 39, 39, 38, 37, 38, 39, 37, 37, 16, 39, 39, 39, 39, 38, 37, 37, 37, 37, 33, 37, 17, 16, 37, 38, 32, 37, 14, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 33, 17, 37, 32, 37, 37, 37, 33, 38, 38, 37, 15, 38, 39, 38, 38, 38, 38, 33, 16, 37, 33, 16, 16, 37, 34, 37, 35, 31, 16, 37, 32, 32, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGHSVTVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWVKQRLGRSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTSYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKGKATMTADKSSCTAYMQFSSLTYDDSAVYFW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASAITDAIDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "55" }, { "name" : "Source-Identity", "value" : "81.23%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGHSVTVSCKGSGYAFTSYLIGWVKQRLGRSLEWIGVINSGSGGTKYNEKFKGKATMTADKSSCTAYMQFSSLTYDDSAVYFWASAITDAIDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2570 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7595:4218 (reversed)", "sequence" : "GGTGGAGGTGCAGCTGCAGCAGTCTGGGACTGTGCTGGCAAGGCCAGGGGCTTCATTGAGGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAATGATGCCAAATACACCCAGAAGTTCAAGGCCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCGACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTGCAAGAAACTGGGACTGGGTGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGTTCATCCCTTGTCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 32, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 19, 35, 38, 39, 39, 39, 39, 34, 37, 38, 39, 38, 38, 39, 39, 39, 39, 38, 38, 39, 37, 38, 37, 39, 36, 39, 38, 38, 38, 37, 36, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 36, 38, 39, 38, 39, 38, 18, 37, 38, 16, 37, 34, 18, 37, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 30, 38, 39, 37, 37, 38, 37, 39, 39, 38, 36, 36, 37, 39, 38, 38, 30, 38, 37, 37, 37, 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37, 37, 37, 32, 30, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPGNNDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWDWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASLRMSCKASGYTFTNYWINWIKQRPGQGLEWIGAIYPGNNDAKYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYCARNWDWVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2573 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7965:4219 (reversed)", "sequence" : 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"IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKDSGAGLVKPGASVKLSCKASGYTFTEFIIHWVKQRSGQGLEWIGWFYPGSDSIKYNEKFKDKATLTADISSSTVYMELSRLTSEDSAVYFCARHLYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2577 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20795:4222 (reversed)", "sequence" : "GCGTGAGGTGCAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCACCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTATCCAGATATAGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATGATATGGGGTGGTGGAAGCACAGACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGGCAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCTCGAAACTCCCTCACGATGGTTACTACGAGAGGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGTGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 32, 35, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 36, 36, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 38, 39, 39, 39, 31, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 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39, 38, 38, 36, 36, 38, 38, 39, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLSRYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNSALKSRLSISKGNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASKLPHDGYYERDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.15%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 335, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" 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"AAGTGACGTGATGCTGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGTTTTTGGCTTCAACATTAAATCCACCTACATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATGGGTTGATCCTGCGAATGGTAATAGTAAATGTGACCCGAGGTTCCAGGGCAAGGCCACTATAACAGCAGACTCATCTTCCAACACAGCCTACCTGCAGCTCAGCAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCTCCATTACGCCTACCAGTTTGACTACTGGGGCCAAGGCACCACTGTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCCCTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 33, 37, 37, 34, 34, 34, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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37, 37, 37, 33, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGAELVKPGASVKLSCTVF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKSTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VDPANGNS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ALHYAYQFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGAELVKPGASVKLSCTVFGFNIKSTYIHWVKQRPEQGLEWIGWVDPANGNSKCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYCALHYAYQFDYWGQGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2580 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8053:4223 (reversed)", "sequence" : "CGTGCAGGTTCAGCTCCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCTATCCCCTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 32, 33, 34, 34, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 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"EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"ERR346596.2588 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7452:4230 (reversed)", "sequence" : "CCGTGAAGTGAAGCTGGTGGAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGTGGATTCTGCCATCTATTACTGTGCAAGATACGGCTACGGTAGTAGCTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCATTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "53" }, { "name" : "Source-Identity", "value" : "81.97%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : 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"EVKLVESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSVDSAIYYCARYGYGSSYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2589 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23902:4230 (reversed)", "sequence" : "TTTTGAGGTCCAGCTTCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAAGGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCACTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 36, 38, 37, 38, 38, 39, 39, 39, 39, 39, 37, 36, 39, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 17, 17, 36, 37, 38, 32, 37, 38, 37, 37, 39, 38, 33, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 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"Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKRNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2590 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21472:4231 (reversed)", "sequence" : "TGCGGAGGTGCAGCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTTAGTGAAGATATCCTGCAAGGCTTCTGGTTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAGATGGTAGTACTAAGTACAATGAGAAATTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACTTCTGAGAACTCTGCAGTCTATTTCTGTGCAAGAAATGGTAACTACCGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGTTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : 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"ATCAGAGGTGAAGCTGATGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCATTGGTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 34, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 35, 38, 38, 39, 39, 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38, 38, 38, 37, 37, 37, 37, 37, 32, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VSDGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% 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"value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGGLVKPGGSLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATVSDGGNYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2730 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20784:4334 (reversed)", "sequence" : "AATGGAAGTGATGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGATTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCAGTGATTTCTACATGGAGTGGGTCCGCCAGCCTCCAGGGAAGAGACTGGAGTGGATTGCTGCAAGTAGAAGCAAAGCTTATGATTATACAACAGAGTACAGTGAATCTGTTAAGGGTCGGTTCATCGTCTCCAGAGACACTTCCCAAAGCATCCTCTACCTTCAGATGAATGCCCTGAGAGCTGAAGACACTGCCATTTATTACTGTGCAAGAGGGGTTCTACGGGGAGGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTCCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 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38, 33, 37, 38, 37, 38, 37, 37, 38, 36, 36, 33, 32, 33, 33, 33, 37, 37, 33, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGDSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MEWVRQPPGKRLEWIAA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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: [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGVLRGGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFSDFYMEWVRQPP GKRLEWIAASRNKANDYTTEYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-1" }, { "name" : "Videntity", "value" : "100,00% (303/303 nt)" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 368, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FGE" }, { "name" : "IMGT_allele", "value" : "IGHD3-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-10" }, { "name" : "Source-Sequence", "value" : "AF062256" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "82.35%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGDSLRLSCATSGFTFSDFYMEWVRQPPGKRLEWIAASRSKAYDYTTEYSESVKGRFIVSRDTSQSILYLQMNALRAEDTAIYYCARGVLRGGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2557 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24204:4201 (reversed)", "sequence" : 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299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRLRARFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2560 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9597:4202 (reversed)", "sequence" : "ACGGCAGGTCCAGCTCCAGCAATCTGGACCTGAGCTGGTGAAGCCGGGGGCCTCAGTGGAGATTTCCTGCAAAGGATCTGGCCACGCATTCAGTAGCTCTTGGATGAACTGGGGGAAGTGGAGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGAAACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAACTACGGTAGTAGCCCCCATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGATTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 35, 35, 37, 37, 37, 37, 33, 38, 38, 37, 38, 37, 37, 34, 32, 37, 35, 37, 38, 39, 39, 16, 15, 33, 32, 38, 37, 37, 36, 38, 34, 37, 33, 38, 38, 39, 34, 37, 39, 30, 34, 38, 38, 38, 36, 38, 38, 37, 37, 38, 33, 38, 38, 31, 14, 16, 37, 38, 39, 17, 37, 38, 37, 33, 34, 39, 39, 38, 37, 33, 16, 29, 37, 37, 39, 39, 38, 38, 38, 34, 29, 36, 36, 38, 33, 17, 29, 33, 17, 38, 37, 17, 36, 37, 38, 16, 38, 16, 33, 38, 37, 38, 16, 33, 35, 38, 39, 14, 31, 14, 34, 27, 27, 35, 38, 35, 38, 34, 14, 30, 34, 34, 38, 15, 30, 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32, 33, 37, 37, 37, 37, 33, 33, 32, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVEISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWGKWRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "GHAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATTVVAPMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "89.09%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 295, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVEISCKGSGHAFSSSWMNWGKWRPGQGLEWIGRIYPGDGETNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCATTVVAPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2681 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9574:4301 (reversed)", "sequence" : "TTTGCAGGTTCAGCTGCAGCAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAATTTACTACGGTAGTAGCTACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCCCTGGAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 35, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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32, 32, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARIYYGSSYDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARIYYGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2682 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10653:4301 (reversed)", "sequence" : "TGTAGAGGTGATGCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 31, 33, 33, 33, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 38, 39, 39, 38, 38, 37, 37, 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38, 38, 38, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2683 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18086:4302 (reversed)", "sequence" : "ACCTGAGGTGCAACTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGAGAGCAGTACGATAAACTATACGCCATCTCTAGAGGATAAATTCATCATCTCTAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAGGAAATGGTTACTACGGCTGGATTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCTATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 36, 37, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 38, 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33, 33, 33, 33, 37, 37, 37, 32, 32, 32, 18, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYTPSLEDKFIISRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPESSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"Source-Sequence", "value" : "AF062138" }, { "name" : "Source-Mismatches", "value" : "64" }, { "name" : "Source-Identity", "value" : "77.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", 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"TGATCAGGTCCAGCTTCAGCAATCTGGGGCAGACCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGAAGGATTGATCCTGCGAGTGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATAAAGTCTCCCTGCAGCTCAGCGGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCATGATGCCCCTTTTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTCTATCCATTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWGRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, 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"EVQLQQSGAELVKPGASVKLSCTTSGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTKYDPEFQGKATITADTSSNTAYLHLSSLTSEDTAVYSCAHDAPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2698 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19600:4313 (reversed)", "sequence" : "GACTGAGGTGCAGGTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGACTAGAATGGATTGGAGAAATTAATCCAGATAGCAGGACGATAAACTATAAGCCATCTCTAAAGGAGAAATTCATCATGTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATGACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGTCTATCCATTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 19, 33, 32, 37, 33, 37, 37, 38, 38, 36, 37, 37, 38, 38, 38, 36, 34, 38, 39, 39, 39, 37, 33, 38, 38, 38, 34, 35, 37, 38, 38, 37, 36, 38, 34, 38, 39, 38, 37, 36, 39, 37, 36, 39, 37, 36, 38, 39, 37, 37, 38, 38, 39, 17, 32, 37, 18, 38, 39, 39, 37, 38, 39, 39, 39, 37, 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37, 32, 34, 37, 38, 34, 38, 39, 37, 38, 35, 20, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, 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"IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, 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"CGTGCAGGTGCAGCTGAAGGAGTCTGGAGCTGAACTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAATGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCGGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCATTGGCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 33, 34, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 37, 39, 38, 39, 39, 39, 39, 38, 38, 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37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSGLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSGLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2701 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15859:4317 (reversed)", "sequence" : "CTACGAGGTGCACCTGGTGGAGTCTGCAGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGATATAATGAGTACAATCAGAAGTTCAAGGACAAGACCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCAGCGGTCTATTACTGTGCAAGACCGTATGGTAATTACGTCTACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCCTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 32, 32, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 39, 38, 38, 38, 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31, 31, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESAAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFKDKTTLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPSSGYN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPYGNYVYY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESAAELARPGASVKMSCKASGYSFTSYTMHWVKQRPGQGLEWIGYINPSSGYNEYNQKFKDKTTLTADKSSSTAYMQLSSLTSEDSAVYYCARPYGNYVYYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2703 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21290:4320 (reversed)", "sequence" : "TTAACAGGTCCAGCTTCAGCAATCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACGATGAAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAAGAAGGGGTAACTACTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCTCATCCACTGAGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 40, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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"ERR346596.2706 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8188:4322 (reversed)", "sequence" : "GGTGGAGGTGAAGCTGATGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGATACTATAGGTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCACTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 38, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRYYRYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQNFTDKASLTVDESSSTAYMEFHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGITTDFTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKDSGPELVKPGASVKISCKASGYSFTGYYVHWVKQSHVKSLEWIGRINPYNGATNYNQNFTDKASLTVDESSSTAYMEFHSLTSEDSAVYYCARSGITTDFTYWGQGTLVTVST" } ] } ] }, { "sequence" : { "name" : "ERR346596.2708 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20069:4323 (reversed)", "sequence" : "GTTTGATGTGCAGCTTCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCAGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTTTGCAGCCAAAACGACACCCCCATCTGCTCATCCCTTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYQQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { 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] } ] }, { "sequence" : { "name" : "ERR346596.2709 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10516:4324 (reversed)", "sequence" : "ATGCGAGGTGCAGCTTCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGATACTATAGGTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCCTTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 35, 33, 33, 33, 37, 37, 38, 38, 38, 38, 33, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 34, 38, 38, 36, 36, 37, 39, 37, 39, 39, 37, 38, 38, 37, 38, 37, 37, 37, 39, 38, 39, 36, 38, 36, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 36, 39, 38, 37, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 33, 37, 39, 37, 39, 37, 39, 37, 39, 39, 39, 39, 39, 35, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRYYRYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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}, { "sequence" : { "name" : "ERR346596.2710 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8053:4324 (reversed)", "sequence" : "GGCGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTATTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTCCATCCCTTGACAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 35, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 39, 38, 39, 39, 34, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 37, 38, 38, 39, 38, 39, 39, 20, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 37, 37, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 31, 38, 39, 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"AAGGCAGGTCCAACTGCAGCAGCCTGGGCCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCCTCAGGCTATACCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTGGTCCTTCCAATAGTGAAAGTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGAATGTAGACAAATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGAACCACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGTTCATCCATTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 38, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 38, 39, 38, 38, 38, 38, 35, 34, 38, 37, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 33, 38, 39, 37, 38, 36, 38, 37, 39, 39, 38, 39, 33, 38, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 38, 36, 38, 39, 39, 39, 38, 37, 18, 34, 37, 38, 39, 38, 39, 38, 37, 38, 15, 15, 38, 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32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVRPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFKDKATLNVDKSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGPSNSES" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : 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"0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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(292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, 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"name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTTYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EYNRKFKDKATLTADKSSSTAYMQLSSLTSEDSTVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPFTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGAGTTVPVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGLRDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : 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"ACTGGAGGTCCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCCTTGTCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2671 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12113:4294 (reversed)", "sequence" : "CGCACAGGTGCAGCTGAAGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAATCTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGAGTTGGGCTCGGCAGGCTCCAGGGAAAGGGCAGGAATGGATTGGAGAAATTAATCCAGGGAGCAGTACGATAAACTATACGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGATCAGCTTTTTATGCTCTGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGCTTATCCATTGCTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 33, 37, 33, 37, 37, 34, 37, 38, 38, 38, 38, 38, 36, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 37, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 38, 38, 38, 38, 18, 37, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 39, 39, 38, 38, 39, 38, 39, 38, 39, 38, 36, 39, 39, 38, 39, 38, 38, 36, 19, 38, 39, 37, 19, 37, 39, 39, 38, 39, 39, 39, 18, 18, 33, 38, 37, 38, 38, 39, 39, 39, 38, 38, 38, 36, 36, 38, 38, 39, 39, 38, 39, 39, 37, 38, 38, 38, 38, 38, 39, 38, 37, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 38, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 34, 34, 36, 38, 35, 36, 35, 34, 37, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 38, 37, 39, 39, 37, 37, 37, 38, 39, 39, 38, 34, 37, 38, 37, 38, 38, 38, 39, 39, 39, 39, 37, 37, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 39, 39, 39, 37, 39, 39, 38, 39, 38, 39, 38, 36, 39, 37, 38, 19, 39, 39, 39, 39, 39, 37, 38, 39, 37, 38, 39, 39, 39, 38, 39, 39, 37, 39, 37, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 20, 39, 37, 37, 37, 38, 38, 38, 39, 37, 37, 36, 39, 39, 39, 38, 38, 38, 38, 36, 39, 37, 37, 38, 33, 37, 38, 32, 17, 36, 36, 39, 36, 33, 38, 38, 33, 38, 38, 38, 37, 20, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSLNLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWARQAPGKGQEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFDFSRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSAFYALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLKLSCAASGFTFGSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV3-7*03" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "99,31% (288/290 nt)" }, { "name" : "Source-Sequence", "value" : "AF062138" }, { "name" : "Source-Mismatches", "value" : "67" }, { "name" : "Source-Identity", "value" : "76.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 284, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSLNLSCAASGFDFSRYWMSWARQAPGKGQEWIGEINPGSSTINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARSAFYALDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2672 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8067:4294 (reversed)", "sequence" : "GAGCCAGGTTCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCGAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCCCATCCACTGCTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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"TGGAGAGGTCCAGCTGCAACAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTCATTGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGCTTAATCCTGGAAGTGGTGGTACTAACTACAATAAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGATGGTAACTGGTTTCCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAGAACAACACCCCCATCGGCTCATCCCCTGCTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 35, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 39, 39, 38, 34, 39, 37, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNKKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWFPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKASGYAFTNYFIEWVKQRPGQGLEWIGVLNPGSGGTNYNKKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARDGNWFPYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2676 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13582:4299 (reversed)", "sequence" : "GAATGAGGTGCAGCTTCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGGCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCATTGTTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 31, 32, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 37, 38, 37, 37, 38, 38, 38, 38, 38, 39, 39, 35, 38, 38, 39, 38, 35, 37, 35, 38, 39, 39, 39, 34, 14, 37, 37, 39, 36, 39, 39, 39, 38, 39, 39, 39, 37, 36, 39, 39, 39, 38, 38, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 37, 39, 37, 39, 39, 39, 39, 39, 38, 33, 37, 38, 37, 38, 37, 39, 37, 35, 39, 39, 38, 39, 36, 32, 15, 38, 37, 34, 39, 34, 37, 38, 39, 37, 36, 38, 38, 39, 38, 39, 38, 34, 38, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 30, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 35, 33, 38, 28, 39, 39, 37, 38, 38, 27, 13, 39, 33, 38, 33, 16, 35, 37, 33, 39, 37, 37, 38, 16, 39, 37, 37, 39, 38, 39, 39, 39, 35, 31, 16, 39, 38, 37, 38, 37, 37, 39, 39, 39, 36, 38, 39, 37, 39, 37, 38, 39, 38, 39, 39, 37, 36, 38, 39, 39, 38, 39, 39, 36, 38, 37, 36, 36, 38, 38, 39, 39, 39, 39, 37, 34, 34, 38, 38, 38, 38, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 34, 39, 38, 38, 39, 38, 36, 38, 36, 16, 32, 36, 39, 36, 33, 37, 39, 32, 38, 39, 39, 30, 32, 39, 39, 39, 38, 39, 38, 38, 36, 38, 38, 38, 39, 37, 38, 38, 38, 38, 37, 37, 33, 37, 33, 37, 37, 37, 37, 37, 33, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSRLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKTSGYTFTNYWINWIKQRPGQGLEWLGRIAPGSGSTYYNEMFKVKAPLTVDTSSSTAYIQLSRLSSEDSAVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2678 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14874:4299 (reversed)", "sequence" : "TCAGCAGGTACAGCTCCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGCACAAATCATACAGCACAGTCTATATGGAGCTTAATAGATTGACAACTGAAGACTCTGTGGTCTATTTCTTTGCAAGACACGAAGATAGAGATTACGGCGGGTTTACTTACTGGGGCCAAGGGACTCTGATCACTGTCTCTGCAGCCAAAACAACGCCCCCAGCGGCCCATCCCTTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 16, 33, 29, 16, 37, 16, 33, 35, 38, 38, 37, 16, 16, 16, 16, 16, 33, 37, 37, 39, 16, 38, 34, 35, 32, 15, 37, 34, 33, 15, 38, 36, 16, 38, 33, 33, 37, 38, 38, 38, 39, 38, 32, 36, 36, 36, 38, 36, 34, 39, 39, 39, 39, 17, 16, 37, 38, 34, 39, 32, 38, 39, 34, 38, 39, 37, 37, 37, 38, 36, 38, 36, 37, 39, 16, 38, 37, 34, 36, 33, 15, 33, 29, 37, 37, 39, 33, 37, 39, 39, 35, 38, 38, 33, 36, 37, 37, 38, 38, 35, 38, 39, 35, 31, 37, 38, 39, 34, 38, 36, 37, 36, 36, 38, 39, 37, 34, 38, 39, 32, 27, 15, 37, 33, 37, 39, 36, 34, 34, 37, 32, 27, 33, 37, 38, 38, 33, 37, 33, 37, 30, 31, 37, 35, 34, 38, 32, 34, 34, 14, 34, 34, 15, 37, 38, 37, 16, 27, 16, 30, 37, 36, 33, 34, 27, 25, 37, 28, 37, 36, 33, 37, 37, 38, 38, 35, 38, 24, 29, 38, 39, 33, 15, 27, 35, 37, 35, 39, 15, 35, 38, 37, 39, 39, 37, 33, 27, 14, 25, 25, 38, 37, 36, 25, 26, 25, 34, 33, 38, 37, 39, 26, 25, 15, 19, 32, 2, 37, 33, 39, 39, 38, 37, 15, 2, 26, 2, 26, 26, 15, 15, 38, 34, 27, 26, 33, 15, 33, 2, 15, 35, 14, 27, 15, 15, 13, 36, 35, 35, 28, 15, 15, 15, 28, 15, 15, 35, 27, 16, 16, 16, 16, 29, 16, 16, 29, 16, 16, 29, 15, 16, 15, 27, 13, 15, 16, 16, 16, 16, 16, 37, 15, 15, 30, 15, 16, 16, 27, 16, 16, 30, 17, 37, 37, 14, 38, 38, 35, 35, 37, 29, 17, 17, 17, 16, 17, 33, 14, 14, 30, 14, 14, 14, 14, 14, 14, 38, 29, 33, 33, 33, 17, 16, 17, 16, 33, 14, 14, 36, 14, 16, 15, 16, 15, 37, 33, 16, 16, 33, 16, 16, 16, 33, 17, 33, 17, 33, 38, 33, 15, 15, 15, 15, 33, 16, 16, 33, 14, 14, 16, 38, 36, 33, 33, 32, 32, 14, 14, 14, 36, 32, 14, 14, 15, 15, 15, 15, 32, 15, 32, 15, 38, 16, 37, 37, 37, 32, 16, 16, 16, 31, 16, 32, 32, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "KYNEKFKDKATLTAHKSYSTVYMELNRLTTEDSVVYFF" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLITVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRDYGGFTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "56" }, { "name" : "Source-Identity", "value" : "80.89%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTAHKSYSTVYMELNRLTTEDSVVYFFARHEDRDYGGFTYWGQGTLITVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2679 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15360:4300 (reversed)", "sequence" : "CGTCCAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGCCAGGGGGACTATGGCTCTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 37, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 38, 24, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 38, 39, 36, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 35, 37, 37, 37, 38, 38, 38, 37, 38, 39, 38, 38, 38, 39, 38, 38, 38, 15, 16, 33, 38, 39, 39, 39, 37, 34, 39, 39, 39, 39, 33, 37, 39, 38, 39, 39, 37, 37, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 37, 37, 37, 38, 37, 36, 18, 39, 39, 38, 39, 39, 39, 39, 32, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 37, 39, 39, 37, 38, 39, 38, 38, 38, 37, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 33, 38, 32, 37, 36, 37, 34, 38, 39, 37, 35, 39, 39, 38, 34, 39, 39, 38, 17, 39, 37, 38, 36, 36, 38, 38, 39, 38, 37, 38, 38, 37, 37, 38, 37, 37, 37, 32, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASQGDYGSFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCASQGDYGSFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2680 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12635:4301 (reversed)", "sequence" : "GCGGGAGGTGAAGCTGATGGAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTACGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCCTATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 36, 38, 38, 39, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 37, 39, 38, 39, 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: "GACTGAGGTGCAGCGGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGCGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTAAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCATTGGGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 32, 32, 37, 37, 32, 37, 30, 37, 37, 37, 38, 36, 34, 15, 32, 32, 15, 37, 38, 16, 37, 38, 39, 39, 16, 15, 30, 14, 36, 34, 14, 14, 33, 37, 38, 32, 35, 17, 16, 38, 39, 39, 39, 39, 39, 38, 38, 30, 37, 38, 39, 16, 17, 37, 38, 39, 16, 16, 33, 38, 16, 38, 39, 39, 39, 39, 16, 16, 16, 17, 16, 33, 38, 39, 39, 39, 39, 39, 33, 38, 14, 38, 39, 16, 33, 38, 39, 16, 37, 38, 17, 36, 16, 33, 37, 39, 39, 38, 33, 29, 38, 39, 39, 33, 27, 29, 33, 37, 39, 38, 36, 15, 37, 14, 29, 36, 38, 38, 14, 27, 27, 37, 39, 15, 38, 39, 39, 39, 39, 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38, 38, 33, 33, 37, 37, 37, 37, 34, 32, 32, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLKMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDISWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLKMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2805 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18409:4386 (reversed)", "sequence" : "GTATGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGTCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 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37, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 38, 19, 36, 38, 39, 38, 39, 39, 38, 38, 38, 39, 37, 37, 37, 39, 39, 39, 39, 39, 37, 39, 38, 39, 36, 39, 38, 36, 38, 39, 38, 38, 37, 39, 37, 39, 36, 32, 38, 38, 38, 39, 39, 38, 37, 38, 38, 38, 37, 36, 34, 38, 38, 36, 38, 38, 39, 38, 37, 38, 37, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2806 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17906:4387 (reversed)", "sequence" : "TGCTGAGGTACAGCTTCAGGAGTCTGGACCTTACCTGGTGAAGCCTGGGGCTTCAGTGAAGATTTCCTGCAAGACTTCTGGATACATATTCACTGACTACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTGTTAATCCTAACAGTGGTGCTGGTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTAACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCAATTTATAACTACTATTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCACTGGTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"QVQLKESGAELAKPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSASTAYMQLSSLTSEDYAVYYCARPRGYRAYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2813 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20718:4391 (reversed)", "sequence" : "AAAACAGGTCCAACTGCAGCAGTCCATCCCCATCTGCCTATCCATTGATCCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTATGCCGTCTTCTGCTTGAAAAAACAAAGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGGTATTACTTGCTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCAAGCACAGCCTACATTCAGCTACCCATTCTGTCATCTGAGGACTCTGCTGTTTATTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTAAAACAGGTCCAACTGCAGCAGTCCATCCCCATCTGCCTATCCATTGATCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 33, 37, 33, 37, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 37, 37, 37, 34, 32, 32, 32, 36, 18, 20, 38, 36, 37, 39, 39, 33, 18, 37, 37, 37, 38, 39, 36, 37, 37, 39, 37, 39, 35, 32, 33, 38, 37, 38, 38, 38, 16, 34, 37, 34, 38, 37, 16, 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37, 19, 38, 30, 34, 38, 37, 37, 38, 39, 38, 33, 16, 37, 38, 38, 36, 36, 38, 38, 38, 37, 36, 36, 38, 38, 39, 37, 38, 34, 32, 35, 39, 39, 39, 39, 39, 38, 37, 34, 39, 39, 39, 38, 38, 38, 33, 38, 39, 38, 37, 36, 37, 19, 33, 38, 38, 37, 32, 38, 39, 38, 37, 38, 38, 38, 38, 38, 32, 34, 37, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QVQLQQSIPICLSIDPDRKSTRLNS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 139, "max" : 153, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "CYNEMFKGKATLTVDTSSSTAYIQLPILSSEDSAVYFF" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 373, "max" : 387, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "1" } ] } ] }, { "sequence" : { "name" : "ERR346596.2814 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37, 39, 39, 38, 37, 39, 37, 38, 36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 37, 38, 38, 34, 36, 37, 33, 33, 33, 37, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSCW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSASYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGDDYYGGAPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGASVKLSCKASGYTFTSCWINWVKQRPGQGLEWIGNIYPSASYTNYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTRGDDYYGGAPYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2815 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22081:4392 (reversed)", "sequence" : "CACAGAGGTCCAGCTGCAACAGTCTGAGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGTAAGGCTTCTGGCTACACCTTCACCAGCTACTATATGTACTGGGTGAAAAAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAAGATTAATCCTAACAATGATGGTACTAATTTAAATGAGAAGTTCAAGAGCAGGGCCACACTGACTGTAGACAAATCCTCCAGCACAGTATACATGCAACGCATCAGCTTGACAGCTGATGACTCTGCGGTCTATTACAGTGCAAGAGCGGCATATGACCCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCTCCTGCGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 16, 16, 34, 37, 32, 37, 33, 37, 37, 38, 38, 38, 33, 16, 33, 16, 16, 32, 32, 35, 32, 37, 37, 16, 16, 15, 15, 32, 15, 15, 32, 16, 16, 37, 37, 16, 15, 35, 16, 16, 33, 36, 38, 39, 39, 38, 30, 32, 36, 36, 15, 16, 37, 37, 17, 37, 17, 16, 35, 16, 16, 35, 38, 37, 38, 37, 37, 38, 17, 38, 16, 15, 38, 34, 32, 32, 38, 37, 16, 15, 16, 33, 31, 29, 15, 33, 37, 36, 16, 16, 16, 16, 33, 14, 16, 16, 33, 33, 16, 31, 17, 33, 33, 31, 17, 17, 33, 38, 39, 36, 33, 14, 30, 16, 16, 16, 15, 14, 30, 29, 14, 14, 14, 29, 37, 14, 37, 15, 33, 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33, 18, 37, 37, 32, 32, 16, 35, 35, 35, 32, 32, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSEAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKKRPGQGLEWIGK" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NLNEKFKSRATLTVDKSSSTVYMQRISLTADDSAVYYS" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPNNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAAYDPYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSEAELVKPGASVKLSCKASGYTFTSYYMYWVKKRPGQGLEWIGKINPNNDGTNLNEKFKSRATLTVDKSSSTVYMQRISLTADDSAVYYSARAAYDPYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2816 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23497:4392 (reversed)", "sequence" : "ATTAGAGGTAAAGCTTCAGGAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGAGATTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCTTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 20, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 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}, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAREGVDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2635 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14937:4264 (reversed)", "sequence" : "GTGGCAGGTGCAACTGAAACAGGCCCATCAGGCCCTCCACTGGGCCAGGGCGGAAGAGCACACGTCTGGAAACCAGTCACAGTTTCGTTTATCGGATGACGTCTTCTGCTTGGGAAAAAAAAATCAAGCAAAAGATCTGAGGGGGGTTTGAGTTAATTATAATTACTATGGGAGTGCTACCTCCAAACAGAACATTAAAGGCAAGGCCACAACGACTGTAGACAAATCCTCCAGAACAGCCTATATGGAACTTGCCATACTGACATCTGAGGATTCTGCCATCTATTACTGTGCAATTCTTATTTAAAGTATCCGCCGACTACCGAGAGCTACACTCTTCCCCTACACAACGCTCTTCCGATCTGTGGCAGCTCCAACTGCAGCAGCCCCATCAGCCCATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 16, 16, 33, 31, 37, 16, 34, 38, 16, 33, 16, 16, 16, 15, 15, 32, 37, 36, 15, 15, 15, 16, 16, 16, 15, 32, 15, 32, 15, 15, 15, 32, 35, 33, 15, 14, 14, 14, 32, 32, 14, 14, 14, 14, 32, 14, 29, 14, 15, 33, 15, 16, 15, 33, 15, 14, 33, 14, 15, 14, 15, 16, 16, 31, 15, 15, 30, 30, 33, 31, 16, 16, 16, 31, 33, 38, 17, 33, 14, 15, 15, 30, 14, 16, 17, 14, 14, 14, 27, 14, 16, 16, 30, 14, 14, 33, 37, 17, 17, 33, 37, 37, 16, 33, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 34, 28, 13, 32, 24, 13, 28, 13, 13, 11, 15, 37, 31, 33, 37, 37, 24, 13, 15, 27, 15, 15, 14, 23, 13, 36, 34, 15, 25, 34, 25, 15, 38, 34, 34, 14, 13, 15, 26, 15, 28, 15, 27, 13, 35, 28, 15, 32, 15, 14, 27, 14, 28, 15, 27, 15, 16, 37, 28, 27, 35, 16, 37, 37, 16, 16, 16, 16, 16, 16, 33, 13, 34, 27, 27, 37, 31, 16, 37, 30, 27, 16, 27, 16, 16, 34, 35, 16, 16, 16, 31, 16, 16, 16, 16, 16, 16, 17, 17, 16, 17, 31, 17, 17, 16, 27, 14, 33, 14, 14, 27, 14, 14, 36, 29, 33, 29, 14, 14, 14, 14, 16, 16, 16, 17, 17, 38, 37, 31, 31, 16, 15, 15, 36, 29, 14, 14, 29, 33, 35, 17, 15, 29, 14, 29, 14, 32, 32, 15, 33, 15, 36, 32, 14, 14, 14, 33, 16, 16, 37, 32, 37, 33, 15, 33, 38, 33, 32, 15, 16, 16, 37, 33, 37, 16, 15, 16, 33, 16, 32, 37, 36, 15, 38, 39, 38, 38, 38, 37, 37, 15, 37, 15, 38, 36, 32, 32, 35, 29, 16, 16, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "QVQLKQAHQALHWARAEEHTSGNQS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TSKQNIKGKATTTVDKSSRTAYMELAILTSEDSAIYYC" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 394, "max" : 408, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "1" } ] } ] }, { "sequence" : { "name" : "ERR346596.2636 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8027:4264 (reversed)", "sequence" : "ATATGAGGTGCAGCTCCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACGTCAATTCATTACTACGGCTGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTCCATCCCCTGGGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 32, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 34, 39, 39, 39, 39, 38, 38, 38, 34, 38, 39, 38, 39, 39, 37, 38, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 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"CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRQFITTAAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRQFITTAAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2637 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13920:4266 (reversed)", "sequence" : "GGAGCAGGTGCAGCTGAAGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAATCGGCCTACTGGGGGACTACTGGGGTCAAGGAACCTCAGTCGCCGTCTCCTCAGCCAAAACGACACCCCCGTCTGCCTATCCCTTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 18, 32, 32, 32, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 35, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 32, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 15, 37, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 38, 39, 39, 39, 39, 39, 36, 39, 37, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 38, 18, 33, 37, 37, 37, 37, 38, 39, 36, 38, 39, 37, 33, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 34, 37, 37, 38, 38, 39, 38, 36, 39, 39, 39, 34, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 38, 35, 38, 39, 39, 39, 39, 38, 33, 32, 37, 38, 39, 29, 38, 38, 38, 39, 39, 33, 35, 37, 39, 39, 15, 32, 38, 38, 37, 38, 38, 39, 37, 39, 39, 37, 34, 38, 39, 33, 24, 27, 35, 15, 35, 38, 39, 39, 39, 39, 39, 39, 37, 34, 39, 24, 38, 39, 34, 38, 39, 38, 39, 38, 39, 38, 34, 38, 39, 33, 37, 38, 33, 37, 34, 37, 38, 37, 38, 38, 38, 37, 37, 37, 38, 38, 38, 38, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 33, 37, 37, 37, 38, 37, 38, 33, 39, 39, 34, 34, 34, 34, 13, 33, 27, 15, 28, 28, 15, 37, 39, 37, 38, 35, 37, 35, 35, 37, 28, 13, 30, 34, 38, 34, 30, 38, 39, 39, 38, 38, 35, 37, 27, 16, 33, 37, 16, 38, 16, 27, 14, 31, 14, 27, 16, 37, 33, 33, 16, 33, 35, 30, 32, 36, 38, 39, 37, 39, 39, 37, 38, 38, 38, 36, 37, 30, 37, 33, 39, 39, 39, 39, 37, 37, 39, 37, 37, 36, 38, 38, 36, 34, 36, 36, 38, 38, 36, 37, 36, 33, 38, 38, 37, 38, 39, 39, 38, 37, 38, 38, 38, 37, 38, 39, 38, 38, 38, 34, 38, 36, 36, 36, 19, 38, 38, 38, 38, 37, 38, 34, 37, 33, 33, 32, 30, 31, 33, 33, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVAVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIGLLGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.28%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCAIGLLGDYWGQGTSVAVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2638 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16245:4266 (reversed)", "sequence" : "ATGGGACGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGAGGGTTACTACGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 34, 37, 37, 34, 34, 34, 32, 32, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 36, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 32, 30, 33, 33, 37, 37, 37, 32, 32, 29, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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: [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGLLRFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" 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"ATGAGAGGTGAAGGTGGTGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAATGGTAACTACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 34, 37, 37, 38, 38, 33, 37, 37, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 38, 36, 32, 38, 38, 39, 34, 37, 37, 36, 37, 38, 38, 38, 34, 36, 32, 32, 33, 35, 31, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDNGNYDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGRYDERSDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : 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38, 39, 38, 36, 37, 38, 38, 39, 38, 38, 38, 36, 37, 38, 37, 38, 38, 34, 33, 32, 35, 33, 33, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGYGYDERGHAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCAREGYGYDERGHAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2784 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9755:4368 (reversed)", "sequence" : "CGCGGATGTGCAACTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGAGTCCCTGAAATTCTCCTGTGCAGCCTCTGGAATCACTGTCAGTAGTTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTACTGGTGGTGGTACCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAGTGAGCAGTCTGAGGTCTGAGGACACGGCCATATATTACTGTGCAAGACACTACGGCTACGTTGATGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCTAAAACAACAGCCCCATCAGTTCATCCACTGGGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 35, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 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37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGGLVKPGESLKFSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GITVSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ITGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGYVDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.23%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGGLVKPGESLKFSCAASGITVSSYTMSWVRQTPEKRLEWVASITGGGTTYYPDSVKGRFTISRDNARNILYLQVSSLRSEDTAIYYCARHYGYVDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2785 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21677:4368 (reversed)", "sequence" : "GGGGGAGGTCCAGCTGCAACAATCTGGACCTGAGGTGGTAAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCCTCTGGTTACTCATTCACTGCCTACTACATTCACTGGGTGAAGCAAAGTCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTAGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAAAGTCCTCCAGCAGAGCCTACATGGAGGTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGATCACCCCCTGGGGTTTTCTTATTGGGGCCTAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCGGTTTATCCATTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 34, 37, 39, 37, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 33, 38, 39, 39, 33, 38, 37, 39, 39, 39, 39, 39, 39, 39, 35, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 36, 38, 39, 39, 39, 33, 37, 38, 35, 39, 35, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 37, 39, 39, 38, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKASGYSFTGYNMNWVKQSNGKSLEWIGNIDPYYGGTSYNQKFKGKATLTVDKSSSAAYMQLKSLTSEDSAVYYCARRGFITTVVEGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2792 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19893:4370 (reversed)", "sequence" : "TCATCAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGACTTCTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTCCAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTTCGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTTATCCCTTGGCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 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"sequence" : "TCGGGAGGTGAACCTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGCTGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCCTTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 19, 36, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 17, 36, 37, 37, 37, 39, 34, 38, 38, 20, 37, 20, 32, 38, 39, 39, 39, 39, 33, 37, 36, 30, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 38, 39, 39, 39, 37, 38, 37, 37, 31, 38, 37, 39, 39, 38, 33, 31, 38, 38, 39, 39, 38, 39, 39, 37, 30, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 37, 39, 38, 14, 36, 38, 38, 39, 38, 37, 39, 39, 38, 38, 27, 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36, 36, 16, 38, 32, 38, 34, 37, 32, 32, 32, 37, 37, 32, 32, 32, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VSAGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"CCGGCAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCACCTCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGCCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 38, 39, 38, 37, 37, 39, 39, 36, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 37, 35, 38, 38, 34, 34, 39, 39, 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38, 38, 38, 33, 33, 33, 33, 33, 32, 33, 33, 33, 33, 33, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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(294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", 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38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 34, 34, 34, 34, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TCATGAGGTACAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCGACAGCCTGACATCTGAGGACTCTGCACTCTATTACTGTGCACGATCCGACTATGGTTACTACTATTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 18, 33, 38, 37, 33, 36, 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39, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 33, 33, 33, 35, 35, 32, 33, 33, 33, 33, 31, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"EVQLVESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2741 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18653:4342 (reversed)", "sequence" : "TAAGCAGGTCCAACTACAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAATTACTACGGTAGTAGTTCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 32, 37, 33, 37, 34, 37, 38, 38, 34, 34, 34, 36, 38, 38, 38, 15, 38, 37, 38, 39, 34, 36, 37, 34, 37, 37, 35, 38, 39, 39, 39, 39, 39, 39, 37, 37, 37, 38, 39, 37, 36, 34, 32, 38, 39, 39, 39, 39, 36, 39, 39, 33, 39, 32, 36, 38, 36, 37, 38, 39, 39, 39, 39, 39, 39, 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37, 38, 39, 37, 38, 39, 39, 34, 37, 38, 37, 37, 14, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 33, 37, 37, 34, 34, 37, 37, 35, 33, 29, 32, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLGAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "VNWGRQPPGKGLGGLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GVLLNNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" 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"GCCGGATGTGCAGCTTCAGGAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTACTGCTCCTGGAAGTGGCAGTACTTACTACAATGAAATGTTCAAGGGCAAGACAACACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGATGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTATTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGCTCATCCCTTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 37, 39, 38, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 35, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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: false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGDDLVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRTAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2746 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23117:4344 (reversed)", "sequence" : "CTTTCAGGTCCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATTCTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTTTCATTACTACGGTAGTAGAGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCACTGCTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 38, 39, 37, 39, 38, 38, 38, 39, 38, 39, 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38, 38, 37, 19, 38, 38, 36, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AFITTVVEYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : 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"translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAFITTVVEYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2747 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17368:4344 (reversed)", "sequence" : "CCATGAGGTGAAGTTGGTGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCACTGCCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 34, 38, 34, 38, 39, 37, 37, 39, 37, 39, 37, 39, 38, 38, 39, 39, 39, 39, 38, 38, 37, 39, 39, 37, 39, 39, 37, 39, 39, 38, 37, 35, 36, 38, 38, 37, 39, 39, 39, 38, 37, 36, 38, 38, 36, 38, 39, 37, 39, 37, 37, 39, 39, 37, 38, 36, 34, 37, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 33, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPEKRLEWVATISGGGSYTYFSDSVKGRFTISRDNAKNNLNLQMSSLRSEDTALYYCARSFGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2751 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15068:4346 (reversed)", "sequence" : "AAAGCAGGTGCAGCTGAAGCAGTCTGGACCTGAGCTAGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGTTACTACATGCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAGGTGTCACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTTACTGTAGACACATCCTCCAGCATAGCCTACATGCAGTTCAACAGCCTTACATCTGAAGACTCTGCGGTCTATTACTGTGCAAGAGTCTCCTATGATTACGACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCACTGTAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 19, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGNPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"GGGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGTAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 37, 34, 39, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 34, 37, 37, 36, 37, 38, 37, 36, 39, 39, 39, 39, 39, 18, 33, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 33, 30, 37, 36, 37, 31, 38, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 31, 37, 38, 39, 39, 39, 33, 38, 39, 39, 39, 36, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 37, 39, 38, 37, 39, 37, 39, 38, 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"EVQLQESVAEIVKPGASVKLSCTVSGFNIRDSYMNWVKQRPEQGLEWFGRIDPATGYLKYDPKLLDKATITVDTSSNTA*LPLSSLTTENTAVYYCALDVGETTNFDYWGQGTTLTVPS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2881 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23601:4438 (reversed)", "sequence" : "GCCGCAGGTCCAGCTTCAGCAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACATTTAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCGACCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAAAGTTGTAGGGTGGCTGTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCAAAAACGACAGCCCCATCAGCTCATCCATTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 16, 16, 29, 35, 35, 37, 37, 35, 37, 16, 33, 38, 16, 37, 38, 38, 33, 38, 38, 37, 39, 39, 39, 39, 34, 39, 39, 34, 38, 39, 16, 33, 38, 16, 16, 35, 38, 37, 39, 39, 39, 39, 36, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 17, 38, 37, 38, 16, 37, 16, 38, 38, 39, 39, 39, 39, 39, 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"QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 102, "max" : 152, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 78, "max" : 101, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLNDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 174, "max" : 287, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : 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[ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2886 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7708:4439 (reversed)", "sequence" : "ATCCGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGCTCATCCCCTGCGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 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"FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLGSEDTAMYYCAGSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2895 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14279:4442 (reversed)", "sequence" : "GTAGGAGGTGAAGTTGGTGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGTACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATAAGCTACGACGGTAGCAATAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTAGTGACACATCTAAGAACCAGTTTTGCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCTACATATTACTGTGCAAGTTACTTTTACTATGCTATGGACTACTGGGGTCAAGGAACCACAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCACTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 29, 32, 32, 16, 35, 37, 32, 32, 32, 35, 37, 38, 18, 37, 38, 16, 32, 16, 32, 37, 32, 38, 39, 33, 36, 38, 39, 34, 37, 38, 39, 38, 37, 39, 39, 38, 36, 39, 15, 37, 36, 16, 38, 38, 39, 39, 16, 37, 33, 36, 37, 39, 39, 36, 37, 38, 39, 38, 38, 36, 39, 39, 39, 16, 37, 39, 39, 39, 39, 37, 33, 37, 39, 38, 38, 17, 38, 39, 39, 37, 39, 39, 39, 39, 34, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 31, 33, 33, 33, 33, 35, 36, 36, 17, 16, 16, 16, 17, 33, 31, 16, 29, 16, 16, 33, 15, 36, 29, 29, 29, 33, 29, 37, 37, 17, 37, 16, 15, 34, 36, 27, 38, 38, 34, 15, 30, 16, 38, 33, 15, 16, 16, 27, 16, 16, 16, 16, 25, 14, 15, 37, 15, 15, 16, 16, 17, 16, 37, 16, 16, 31, 30, 14, 14, 30, 14, 34, 32, 34, 30, 16, 37, 35, 38, 33, 38, 38, 16, 38, 37, 27, 38, 27, 27, 15, 34, 14, 32, 35, 33, 19, 38, 38, 37, 39, 37, 36, 33, 25, 33, 37, 34, 38, 38, 26, 38, 37, 35, 31, 37, 25, 37, 33, 2, 35, 24, 37, 33, 37, 37, 38, 38, 37, 38, 31, 37, 27, 16, 33, 34, 37, 35, 16, 33, 33, 15, 15, 33, 2, 37, 39, 38, 33, 16, 26, 33, 33, 16, 16, 16, 33, 27, 16, 16, 16, 35, 33, 17, 33, 33, 33, 16, 16, 33, 16, 38, 29, 17, 35, 39, 37, 38, 33, 37, 38, 33, 33, 17, 37, 17, 17, 35, 33, 16, 38, 39, 38, 39, 35, 37, 33, 17, 17, 37, 33, 16, 16, 17, 31, 17, 17, 37, 16, 35, 35, 16, 37, 31, 17, 31, 37, 17, 35, 35, 16, 16, 34, 38, 38, 38, 39, 38, 38, 16, 32, 37, 38, 34, 39, 36, 38, 33, 35, 16, 37, 17, 39, 36, 37, 38, 37, 32, 38, 37, 38, 37, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 37, 39, 39, 39, 38, 36, 34, 36, 37, 37, 38, 38, 38, 38, 35, 37, 16, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVKPSQSLSLTCSVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WYWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKNRISITSDTSKNQFCLKLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISYDGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYFYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVKPSQSLSLTCSVTGYSITSGYYWYWIRQFPGNKLEWMGYISYDGSNNYNPSLKNRISITSDTSKNQFCLKLNSVTTEDTATYYCASYFYYAMDYWGQGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2896 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24068:4443 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCAATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGATCTCATTACTACGGCTACGTCATTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCCATCCACTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 32, 35, 37, 37, 37, 37, 35, 38, 38, 33, 38, 38, 16, 16, 37, 38, 39, 39, 39, 39, 39, 39, 38, 34, 15, 36, 34, 14, 32, 38, 34, 37, 38, 38, 38, 35, 35, 37, 39, 39, 39, 38, 15, 36, 34, 32, 36, 37, 39, 37, 39, 39, 39, 39, 37, 38, 38, 16, 16, 34, 38, 39, 39, 16, 37, 33, 37, 16, 16, 30, 38, 38, 39, 39, 39, 33, 38, 39, 39, 36, 37, 37, 38, 39, 33, 39, 33, 38, 38, 39, 35, 39, 39, 39, 39, 37, 17, 36, 37, 39, 33, 37, 36, 38, 39, 39, 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38, 38, 39, 38, 38, 39, 39, 39, 37, 39, 37, 36, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 37, 34, 33, 38, 37, 37, 37, 37, 37, 35, 37, 37, 32, 32, 29, 18, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGQFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDLITTATSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: "TCCAGAGGTGCAGGTGGTGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATAAGCTACGACGGTAGCAATAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCGTGACACATCTAAGAACCAGTTTTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCTACATATTACTGTGCAAGTTACTTTTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCCCTGTACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 32, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 36, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 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37, 37, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPGLVKPSQSLSLTCSVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISYDGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYFYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWMGYISYDGSNNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCASYFYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2898 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9394:4445 (reversed)", "sequence" : "GTGTCAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAACAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGGGTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCATTGGTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 38, 39, 39, 39, 37, 38, 39, 36, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 38, 39, 38, 39, 39, 38, 39, 38, 37, 39, 39, 39, 38, 39, 37, 38, 38, 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37, 33, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAREGVDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2845 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24059:4417 (reversed)", "sequence" : "TTCCGAGGTGAAGCTGATGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATGTATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAGGGGGTTACGACGAAGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCACTGCGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 37, 37, 38, 38, 38, 38, 38, 19, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 30, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 20, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 36, 38, 38, 39, 39, 39, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVKPGTSVKMSCKASGYTFTSYWMH*VKQRPGQGLEWIGDIYPGSDSTNYNEKFKGKATLTVDTSSSTAYMQLSSLTPEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2864 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10841:4431 (reversed)", "sequence" : "GTTGGATGTGAAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCCATCCATTGAAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 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}, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.38%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKLSCKTSGYIFTSYWIHWVKQRSGRGLEWIARIYPGTGTTYYNEKFKGKATLTADKSSSTAYMQLSSLKSEDSAVYFCTRADNPSMGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2869 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14458:4433 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGAACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 19, 33, 33, 19, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 18, 38, 38, 37, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 20, 37, 36, 38, 39, 38, 32, 37, 38, 37, 37, 39, 39, 37, 39, 37, 39, 37, 39, 37, 37, 37, 39, 39, 39, 38, 39, 39, 34, 33, 37, 37, 39, 39, 38, 39, 39, 39, 39, 38, 39, 36, 39, 39, 38, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 36, 37, 39, 39, 37, 39, 37, 39, 39, 38, 30, 38, 39, 39, 39, 39, 37, 39, 38, 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38, 36, 38, 33, 31, 33, 33, 33, 33, 33, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2870 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8020:4433 (reversed)", "sequence" : "GCAGCAGGTTCAGCTGCAGCAATCTGGGTCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCGCAGCTTCTGGCTTCAACATTAAAGACACCCATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCATCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAGACCCTCTTTTTACTACGGTAGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGCGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 29, 32, 37, 37, 33, 37, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 37, 38, 36, 38, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 36, 36, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 38, 38, 37, 37, 37, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 37, 33, 19, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 34, 39, 39, 38, 38, 36, 37, 38, 39, 38, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 37, 39, 38, 36, 36, 39, 39, 39, 38, 37, 38, 38, 39, 38, 37, 35, 39, 36, 30, 35, 37, 37, 39, 39, 39, 38, 38, 38, 14, 38, 37, 16, 33, 37, 33, 16, 37, 33, 38, 39, 39, 15, 28, 35, 38, 37, 39, 38, 37, 37, 34, 14, 14, 26, 38, 37, 32, 37, 38, 38, 38, 38, 26, 34, 37, 36, 36, 36, 15, 37, 38, 37, 37, 37, 38, 38, 38, 37, 38, 38, 37, 37, 38, 37, 34, 34, 37, 37, 33, 37, 37, 38, 38, 38, 37, 38, 39, 39, 37, 34, 38, 37, 33, 37, 38, 38, 39, 38, 25, 13, 37, 37, 39, 39, 36, 38, 32, 38, 37, 33, 38, 38, 15, 38, 35, 38, 34, 15, 37, 38, 33, 39, 38, 27, 34, 34, 38, 37, 32, 35, 37, 37, 39, 38, 35, 37, 39, 39, 39, 39, 35, 39, 37, 39, 39, 17, 33, 14, 35, 34, 37, 36, 38, 38, 39, 38, 39, 38, 37, 38, 38, 37, 38, 39, 38, 39, 39, 39, 37, 33, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 37, 33, 14, 39, 39, 39, 36, 38, 30, 37, 36, 37, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 38, 39, 38, 36, 38, 34, 34, 39, 36, 36, 36, 37, 37, 16, 18, 36, 37, 32, 36, 38, 39, 38, 37, 39, 39, 38, 37, 39, 38, 38, 37, 36, 37, 38, 39, 38, 37, 38, 37, 36, 37, 37, 38, 34, 34, 33, 32, 33, 35, 33, 33, 33, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVKPGASVKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTH" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLHLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVKPGASVKLSCAASGFNIKDTHMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSEDTAVYYCTRPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2873 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8575:4433 (reversed)", "sequence" : "GTACGAGGTGATGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGACCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGGGTGCTTACGGTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTCTATCCCCTGCATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 29, 32, 32, 32, 32, 31, 32, 32, 16, 18, 33, 38, 38, 35, 34, 32, 37, 15, 32, 32, 38, 39, 39, 37, 38, 33, 38, 30, 36, 36, 36, 34, 37, 39, 15, 32, 37, 33, 38, 39, 37, 33, 36, 37, 38, 39, 38, 38, 38, 32, 32, 38, 39, 37, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 36, 39, 37, 38, 38, 16, 38, 37, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 36, 39, 39, 39, 38, 39, 39, 39, 36, 34, 38, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 37, 37, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGPYLVKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYIFTDYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VNPNSGAG" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTALTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSIYNYY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", 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"GAGGGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTATTTACATCTACTATCCAGACAGTGTGAGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGATCGTGGGGTACAGGGCTATGCTATGGACTATTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCACTGAACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 17, 36, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 30, 36, 38, 38, 39, 39, 38, 39, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 33, 38, 39, 39, 39, 39, 39, 34, 37, 36, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 37, 39, 38, 39, 39, 39, 35, 32, 37, 33, 30, 37, 38, 37, 39, 38, 38, 38, 39, 38, 38, 34, 35, 38, 39, 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37, 38, 37, 38, 38, 37, 34, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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37, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNERFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSSWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"ACGCGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCCTGAATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVQLQQSGPELVKTGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGYISCYNGATSYNQKFKGKATFTVDTSSSTAYMQFNSLTSEDSAVYYCARSCGAYGYDGGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2826 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19583:4399 (reversed)", "sequence" : "TTAGGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTATTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACGATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCGGCTTATCCACTGCTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 30, 32, 32, 37, 37, 32, 32, 32, 37, 37, 33, 38, 38, 38, 34, 37, 34, 32, 38, 38, 32, 38, 39, 37, 39, 39, 38, 38, 38, 38, 34, 36, 36, 39, 37, 39, 39, 39, 39, 39, 37, 37, 39, 33, 39, 39, 37, 39, 38, 34, 38, 39, 39, 37, 39, 33, 37, 39, 37, 33, 38, 37, 37, 39, 39, 39, 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"EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"ERR346596.2827 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21454:4400 (reversed)", "sequence" : "GCTACAGGTTACTCTGAAAGAGTGTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATACCTCTACGGCTATACGGCTACGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 37, 38, 38, 38, 39, 37, 20, 37, 36, 35, 36, 38, 34, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 35, 34, 38, 38, 38, 38, 39, 38, 39, 38, 18, 38, 38, 38, 38, 37, 20, 38, 39, 39, 39, 39, 39, 39, 38, 39, 36, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 33, 38, 39, 33, 38, 37, 39, 39, 39, 39, 38, 39, 37, 39, 34, 38, 38, 39, 38, 39, 39, 39, 39, 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38, 38, 37, 37, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 35, 39, 34, 38, 38, 38, 38, 38, 38, 34, 37, 34, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVTLKECGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYLYGYTATFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVTLKECGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYLYGYTATFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2829 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23323:4402 (reversed)", "sequence" : "TGCGCAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCTATCCCCTGCTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 17, 37, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 37, 38, 38, 38, 38, 38, 39, 19, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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37, 38, 39, 37, 36, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 34, 38, 37, 33, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : 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"CAATCAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGACGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTACGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGAACTACTATGATTACGACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 15, 29, 36, 37, 39, 39, 39, 38, 39, 39, 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38, 36, 33, 38, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQTPGQGLEWIGYINPYNDGTTYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGNYYDYDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2831 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8213:4402 (reversed)", "sequence" : "GGCAGGTGCAGCTGACGGAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGAGATTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTCATCCCCTGGACA", "circular" : false, "sequenceType" : "Nucleotide", 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNESFKGKATFTADTSSNTAYMQLSGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, 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298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDEVLQSTYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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37, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 37, 38, 39, 39, 36, 39, 36, 36, 30, 38, 39, 36, 36, 38, 39, 38, 39, 39, 37, 34, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 37, 37, 34, 38, 36, 33, 32, 33, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFMDKATLNVDKSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPSNSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKNHYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDHY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTSVNVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"ERR346596.2963 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24027:4494 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCCTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGGGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCCGCTTATTACTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCTCATCCACTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 30, 32, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 37, 38, 37, 37, 38, 39, 39, 38, 34, 36, 34, 34, 36, 38, 37, 37, 37, 39, 38, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 37, 39, 37, 36, 36, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 38, 37, 37, 37, 39, 36, 38, 39, 39, 39, 39, 37, 37, 39, 39, 37, 37, 37, 39, 33, 33, 38, 38, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 31, 38, 39, 37, 31, 37, 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38, 39, 39, 36, 32, 39, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 36, 38, 38, 38, 38, 34, 37, 37, 37, 37, 37, 37, 32, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GLNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPGNGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AAYYYGSSQFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTASGLNIKDTYMHWVKQRPEQGLEWIGRIDPGNGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAAYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2964 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22063:4494 (reversed)", "sequence" : "CTATCAGGTTCAGCTCCAGCAGTCAGGACCTAGCCTCGTGAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCGACTCCATCACCAGTGGTTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTTACTACAATCCATCTCTCAAAAGTCGAATCTCCATCACTCGAGACACATCCAAGAACCAGTACTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATGGCGTCAACTGGGACGGCCCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTTTATCCCTTGATAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 20, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 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38, 37, 38, 37, 33, 33, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPSLVKPSQTLSLTCSVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRKFPGNKLEYMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GDSITSGY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNPSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWRQLGRPGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGRLG" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GRLG" }, { "name" : "IMGT_allele", "value" : "IGHD3-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-1" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPSLVKPSQTLSLTCSVTGDSITSGYWNWIRKFPGNKLEYMGYISYSGSTYYNPSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCARWRQLGRPGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2965 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15767:4495 (reversed)", "sequence" : "CGGACAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAGCCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCTTGACCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 36, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 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37, 37, 37, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWITY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : 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"ATTTCAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGATGAAGCCTGGGGCTTCGGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTAGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTTCAATGGTGGTACTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCTTCCAGCACAGCCTACATGCATCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCCCCACTCTCTAGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTCATCCCTTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELMKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPFNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "APLSRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : 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"translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" 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"DVHLVESGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGSNHKNEKFKTKATLTVDTSSSTAYMQLSSLAS*DSALYYCARDGNWPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2979 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10199:4502 (reversed)", "sequence" : "GAACAGGTGAAGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGACCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGGCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGATATTACTACGGTTTCCTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTAAAACAACACCCCCATCGGCCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 32, 37, 33, 37, 37, 37, 37, 37, 38, 33, 37, 38, 36, 37, 38, 34, 37, 38, 37, 35, 37, 38, 34, 37, 36, 38, 39, 39, 37, 39, 38, 37, 39, 38, 38, 38, 39, 34, 36, 38, 38, 38, 36, 36, 38, 37, 37, 39, 32, 39, 39, 39, 39, 39, 39, 39, 38, 38, 35, 39, 35, 38, 36, 37, 33, 38, 39, 38, 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"value" : "MHWEKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWEKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2981 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7702:4503 (reversed)", "sequence" : "ACAGCAGGTCCAACTCCAGCAGCCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCACTGTTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 32, 32, 33, 33, 37, 37, 33, 37, 37, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 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37, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 34, 38, 38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMDPGDVWGQGTTVTVSS" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062276" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARDTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2982 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17913:4504 (reversed)", "sequence" : "TCCAGAGGTGCAGCTGGTGGAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATATAGGTACGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCACTGTGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 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38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYRYDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARYRYDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2984 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21144:4505 (reversed)", "sequence" : "AGTGGAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCATTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCGTACATTAGTAGTGGCAGTAGTAACATCCACTTTGCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAATTCCCTGATCCTGCAAATGACCAGTCTCAGGTCTGAGGACACGGCCATGTATTACTGTGTAAGAGGGGAACTGGGACGTCGATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCCCTGCCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 32, 37, 33, 33, 33, 33, 37, 37, 38, 33, 38, 38, 37, 37, 38, 32, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 32, 32, 36, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 37, 38, 39, 36, 39, 39, 37, 37, 37, 36, 38, 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37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTVF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.08%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWLGYISYDGSNHYNPSLTNRVSITRDTSKNQFFLKLNSVTTEDTATYYCASVEVHAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2923 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13049:4465 (reversed)", "sequence" : "GGGGGAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTATGAAGTCTGATGACACAGCCATGTATTACTGTGCAAGGTCTGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACAACACCCCCATCGGTTCATCCATTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 30, 32, 33, 30, 29, 35, 35, 32, 33, 37, 37, 37, 38, 38, 38, 37, 36, 38, 32, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 34, 16, 34, 38, 38, 39, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 37, 39, 38, 30, 37, 39, 36, 37, 39, 37, 37, 34, 18, 35, 38, 37, 39, 39, 39, 39, 39, 38, 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39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 38, 39, 39, 39, 39, 38, 37, 38, 37, 38, 39, 39, 39, 38, 34, 39, 36, 36, 38, 39, 37, 38, 35, 32, 38, 39, 38, 39, 39, 36, 34, 39, 39, 39, 39, 39, 36, 36, 38, 36, 36, 37, 39, 34, 34, 38, 36, 36, 16, 38, 37, 38, 16, 37, 37, 37, 37, 37, 37, 37, 32, 32, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVWGRFTISRDNAKNNLYLQMSSMKSDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGGYTYYPDSVWGRFTISRDNAKNNLYLQMSSMKSDDTAMYYCARSGERYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2924 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17809:4466 (reversed)", "sequence" : "GACTCAGGTCCAGCTGCAGCAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTGGCTACTGGATGCAGTGGGTTAAACAGAGGCCTGGCCAGGGTCTGGAATGGATTGGGATTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCGTCCAGCACAGCCTACATGCAACTCAGGAACTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGTTTTCTACGATAGTACCTCTGCCTACTGGGGCCGAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCACTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 35, 38, 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37, 39, 39, 39, 39, 39, 38, 38, 34, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 38, 36, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSSSTAYMQLRNLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGRGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVFYDSTSAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DSTFDYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DS" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062147" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKASGYTFTGYWMQWVKQRPGQGLEWIGIIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLRNLASEDSAVYYCARVFYDSTSAYWGRGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2925 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9931:4467 (reversed)", "sequence" : "CGGCGAGGTCCAGCTGCAACAATCTGACGCTGAGTTGGTGAAACCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGAAGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTAAAAGATCTGATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 33, 32, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 33, 37, 38, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 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"sequence" : "TCGTGATGTGCAACTGGTGGAGTCTGGGGGAGGCTTAGTGAGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCGGCCTATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 37, 36, 38, 39, 38, 39, 39, 39, 38, 38, 38, 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37, 38, 38, 38, 38, 38, 38, 33, 32, 33, 35, 35, 32, 35, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGGLVRPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASPHCYNSSPWWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : 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"EVMLVESGGDLVKPGGSLKLSCAASGFTFSNYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSLKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCASPHCYNSSPWWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2929 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9005:4474 (reversed)", "sequence" : "TGGGCAGGTTCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGACCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGTACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGGAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTTTATCCCCTGTCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 30, 32, 37, 32, 35, 37, 37, 37, 37, 18, 38, 38, 37, 38, 38, 38, 38, 38, 38, 32, 33, 16, 33, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 36, 33, 33, 15, 37, 36, 36, 32, 14, 14, 14, 33, 32, 38, 35, 37, 15, 32, 14, 33, 38, 37, 16, 33, 38, 39, 39, 37, 37, 38, 38, 38, 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"VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSIRKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADSVKGRFTISRDTAKNTLYLQMSSLRSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYADSVKGRFTISRDTAKNTLYLQMSSLRSEDTAIYYCARQDYYGSSPHWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2936 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13677:4476 (reversed)", "sequence" : "TTTGGAGGTGCAACTGGTGGAGTCTGGGGGAGCCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGATGGTTACACCTACTATCCTGACAGTGTGAAGGGGCGATTCACCATCTCCCGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGACGTCTGAGGACTCAGCCATGTATTACTGTGCAAGACAAAGAGGAGGTGGTTACTACGGTTTCTTTGCTTACTGGGGCCAGGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 34, 34, 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"intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLTSEDSAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGDGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQRGGGYYGFFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGALVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGDGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLTSEDSAMYYCARQRGGGYYGFFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2937 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7168:4477 (reversed)", "sequence" : "NATGGAGGTGATGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTTCATCCATTGACAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 32, 32, 32, 37, 32, 32, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 39, 39, 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35, 35, 16, 37, 37, 29, 29, 16, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVRPWTSVQVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IEWVKPRSGPGLGWI*M" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : 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] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" 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"value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVRPWTSVQVSCKASGFAFTNYLIEWVKPRSGPGLGWI*MVYPGSGGTNYKEKFKGKATLTADKSASAAYMQLSSLTSDDSAVYFCARRDGSYFDYRGQGTPLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2943 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16031:4481 (reversed)", "sequence" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARLYGNYAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2953 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13475:4486 (reversed)", "sequence" : "GAGTCAGGTCCAACTGCAGCAGCCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATAACCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTTGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGAATGGTAACAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCATTGTAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 35, 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38, 34, 33, 31, 33, 33, 33, 33, 33, 33, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLYGNYAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGTSYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYCARQLYGNYAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.2960 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10560:4490 (reversed)", "sequence" : "GGTCGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAGGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGTAGTAGCTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAGCACCCCCATCTGCTTATCCCTTGCGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 38, 39, 39, 39, 38, 39, 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33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNERFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSSWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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"GATACAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGGCGGATTTATCCTGGAGATGGAGATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACATATCCTCCGCCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAAATCTAGCGGTTTCTACAAGATGGGATACTATTCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCCTGTCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 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39, 37, 38, 36, 36, 38, 38, 39, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADISSATAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKSSGFYKMGYYSMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 323, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNYNGKFKGKATLTADISSATAYMQLSSLTSVDSAVYFCAKSSGFYKMGYYSMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3082 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8875:4572 (reversed)", "sequence" : "AGGAGAGGTTAAGCTGCAGCAGTCCATCGCTGGATAAAGATCGGAAGAGGACACGTTGGAACTGTAGTCACAGGCTTGTAGCTCGAATGTCGCCTGCTGCTGGAAGAAATAAATGAAGCAGAGGCCTGGACAAGGCCTTGCGTGGATTGGGGGGCTTACTACTAGCGATGGTGGTACTAACATAAATGAGACATTCAAGAGCGAAGCGACACTGACTGTAGAAAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATGACTATACAAGTACACACTATTTTGTTTTAATGATACAGCGACCACCGGAATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGGGACAGGTTCAGCTGCAGCAGTCCATCCCCTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 16, 16, 16, 29, 29, 32, 37, 16, 31, 31, 33, 37, 35, 16, 33, 36, 36, 16, 32, 37, 33, 33, 16, 18, 18, 16, 15, 33, 15, 15, 15, 15, 16, 17, 16, 32, 16, 16, 16, 16, 32, 14, 14, 14, 33, 15, 33, 14, 15, 14, 15, 33, 14, 15, 15, 14, 15, 33, 16, 16, 33, 16, 17, 35, 17, 35, 17, 17, 16, 33, 37, 14, 14, 15, 15, 14, 33, 16, 17, 35, 35, 35, 14, 29, 15, 16, 16, 16, 33, 14, 14, 33, 14, 14, 15, 33, 16, 33, 36, 16, 16, 33, 16, 15, 15, 29, 15, 16, 16, 16, 16, 17, 17, 16, 16, 16, 29, 16, 33, 27, 27, 37, 36, 37, 16, 14, 14, 27, 15, 16, 27, 15, 14, 37, 14, 33, 34, 34, 16, 27, 14, 14, 29, 30, 27, 16, 15, 15, 38, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 34, 15, 13, 15, 34, 13, 34, 16, 37, 37, 27, 16, 16, 16, 16, 27, 16, 35, 27, 16, 15, 27, 16, 29, 14, 15, 15, 15, 34, 30, 16, 37, 38, 27, 30, 16, 16, 16, 16, 17, 27, 16, 16, 14, 14, 14, 14, 14, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NINETFKSEATLTVEKSSSTAYMQLSSLTSEDSAVYDY" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "LTTSDGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 365, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "1" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "TSTHYFVLMIQRPPESTLFPYTTL" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "88" }, { "name" : "Source-Identity", "value" : "70.07%" } ] } ] }, { "sequence" : { "name" : "ERR346596.3083 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18681:4572 (reversed)", "sequence" : 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36, 39, 36, 36, 36, 34, 35, 38, 34, 35, 35, 37, 38, 37, 38, 37, 37, 37, 33, 37, 37, 37, 37, 37, 37, 32, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDAAICYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGRGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARTPYYRYDDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: "TTAAGAAGTGATGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCACTGAATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : 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: "ERR346596.2901 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7813:4447 (reversed)", "sequence" : "GGGTGAGGTGTAGCTGCAGCAGTCTGGAGCTGGGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGTGCTTAGTAGATGGACATCGGAAGACGCTTCGGTCGATTTCTGTGCAAGACACGAGTCGTATGGTACCTATTTTTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCCTGGCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 29, 32, 32, 37, 37, 34, 32, 37, 19, 32, 37, 38, 38, 37, 38, 38, 38, 38, 36, 38, 38, 37, 38, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 38, 39, 37, 36, 38, 38, 38, 38, 38, 37, 38, 37, 39, 39, 39, 39, 37, 35, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 38, 39, 39, 39, 39, 37, 37, 35, 36, 38, 39, 39, 39, 39, 39, 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38, 38, 36, 36, 34, 38, 38, 37, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 39, 38, 36, 30, 38, 39, 38, 37, 38, 37, 32, 16, 32, 16, 38, 38, 32, 32, 35, 32, 32, 34, 37, 32, 16, 32, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EV*LQQSGAGLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMVLSRWTSEDASVDFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EV*LQQSGAGLVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMVLSRWTSEDASVDFCARHESYGTYFYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2902 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21570:4448 (reversed)", "sequence" : "TCAGCAGGTGCAGCTGAAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATACCTCTACGGCTATACGGCTACGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTTCATCCCCTGCGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 32, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYLYGYTATFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : 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"max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGHGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRGYYDYLFALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPATYYGNFYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYIMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARPATYYGNFYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" 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39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDDAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSRGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGYDDSSYGMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVKPGGSLKLSCAASGFTFSNYGMSWVRQTPDKRLEWVATISSRGSYTYYPDSVKGRFTISRDDAKNTLYLQMSSLKSEDTAMYYCARRGYDDSSYGMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.2920 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14224:4464 (reversed)", "sequence" : "AGGGGACGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGAGGGGGACGGGGCTTACTGGGGTCAAGGGACTCTGGTCACTGTCTCTGCAGCCAGAACAACACCCCCATCTGCTTATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33, 38, 38, 38, 38, 38, 34, 19, 36, 34, 19, 37, 38, 39, 37, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 36, 37, 37, 36, 38, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 36, 38, 39, 38, 36, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 34, 34, 34, 38, 37, 37, 38, 37, 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"name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGDGAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "89.13%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCAREGDGAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3041 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16334:4548 (reversed)", "sequence" : "TCCGCAGGTCCACGTGAAGCAGTCTGGGGCAGAGCTTGTAAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTTCAGGGCAAGGCCACTATAACAGCATACACATCCTCCAACACAGCCTAACTGCAGCTCAGCCGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCTTATCCATTGGGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 30, 16, 29, 16, 35, 35, 35, 37, 37, 37, 37, 38, 30, 37, 38, 15, 15, 33, 37, 38, 38, 39, 39, 39, 38, 39, 38, 30, 36, 15, 36, 37, 34, 39, 39, 37, 39, 15, 16, 35, 17, 38, 39, 37, 33, 15, 38, 38, 38, 38, 38, 38, 38, 37, 39, 38, 16, 38, 39, 38, 35, 37, 16, 35, 38, 39, 39, 39, 38, 38, 16, 33, 37, 32, 37, 39, 39, 16, 38, 39, 39, 38, 36, 38, 39, 33, 16, 16, 37, 38, 37, 37, 16, 37, 38, 15, 15, 38, 14, 38, 34, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 39, 38, 39, 39, 36, 38, 27, 37, 32, 15, 38, 16, 37, 37, 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"GATAGACGTGATGTTGGAGCAATCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTGTAACTCTCCTGCAATGTCACTGGCTACACCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCGGTTTCCAGGAAACAAACTGGAATGGATGGGCTTCATACACTACAGTGGTAGCACTAACTTCGACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGACCAAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAAGACACAGCCACATATTACTGTGCAAGGGACCAGGGGTACTATTCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCTATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 16, 16, 33, 16, 32, 32, 32, 16, 16, 33, 18, 33, 35, 16, 16, 33, 16, 32, 15, 33, 37, 16, 37, 37, 32, 15, 37, 38, 39, 39, 15, 37, 38, 39, 39, 39, 39, 39, 39, 36, 37, 39, 39, 37, 16, 16, 16, 33, 17, 37, 38, 37, 16, 35, 16, 32, 17, 17, 17, 35, 16, 16, 33, 33, 38, 39, 39, 39, 37, 17, 16, 32, 17, 17, 35, 38, 37, 39, 39, 39, 37, 33, 16, 33, 37, 14, 36, 38, 39, 39, 39, 37, 39, 31, 33, 15, 16, 37, 39, 39, 39, 17, 16, 33, 37, 34, 14, 33, 33, 15, 29, 38, 37, 16, 31, 33, 15, 36, 36, 14, 29, 27, 29, 34, 16, 17, 37, 16, 15, 30, 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32, 35, 35, 35, 32, 34, 32, 32, 32, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLEQSGPDLVKPSQSL*LSCNVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRRFPGNKLEWMGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : 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32, 32, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELLKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKRRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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(269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" 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"value" : "EVHLVESGPELARPGESVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVITTYSANAKYNQKFKGKATMTVDKSSSTAYLELARLTSEDSDIYYCARGGTGPFPYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3050 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20553:4550 (reversed)", "sequence" : "AAGAGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAGTGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGTCTATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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"value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"ERR346596.3052 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8063:4551 (reversed)", "sequence" : "AGCCCAGGTTCAGCTGCAGCAGTCTGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTTTATCCACTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 37, 39, 37, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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39, 38, 38, 39, 39, 36, 34, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 38, 36, 38, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 331, "max" : 363, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"CTTTGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATACCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCACCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTACAAGAGATCTCTATGATGGTTACCATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGTTCATCCCTTGCCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 36, 17, 37, 38, 17, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 38, 37, 39, 38, 38, 37, 38, 38, 38, 38, 38, 39, 38, 34, 38, 39, 38, 38, 34, 35, 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"ACAGGAGGTGCAGCTGGTGGAGTCTGGACCTGAGGTGGTAAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGCCTACTACATTCACTGGGTGAAGCAAAGTCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTAGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAGAGTCCTCCAGCAGAGCCTACATGGAGGTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGATCACCCCCTGGGGTTTTCTTATTGGGGCCTAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCTGTCTATCCACTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 32, 32, 37, 37, 37, 38, 38, 38, 38, 33, 38, 34, 38, 38, 39, 39, 39, 37, 39, 37, 39, 39, 39, 37, 39, 39, 38, 38, 39, 38, 38, 38, 39, 37, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 37, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 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36, 39, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 37, 38, 37, 37, 37, 37, 37, 31, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPEVVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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}, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYNFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HKNEKFKTKATLTVDTSSSTAYMQLSSLASEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAEFVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGSNHKNEKFKTKATLTVDTSSSTAYMQLSSLASEDSALYYCARDGNWPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3058 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24342:4556 (reversed)", "sequence" : "CGGCCAGGTCCAGCTTCAGCAATCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAATATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCATTGGTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 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39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 34, 37, 36, 34, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 38, 39, 38, 36, 39, 34, 37, 32, 36, 36, 36, 38, 39, 38, 37, 38, 37, 39, 38, 39, 39, 38, 37, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 37, 38, 38, 38, 36, 38, 37, 37, 37, 37, 37, 33, 37, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3059 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23880:4556 (reversed)", "sequence" : "GGAGCAGGTCCAACTGCAGCAGTCTGGGGCTGAGTTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGATATTTATCCTTCTGCTAGTTATACTAACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGCGATGATTACTACGGAGGGGCCCCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGCTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 34, 34, 34, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 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39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 37, 33, 37, 37, 38, 37, 38, 36, 36, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 37, 37, 32, 35, 38, 39, 36, 32, 39, 39, 39, 38, 39, 37, 37, 36, 32, 37, 36, 39, 38, 38, 38, 37, 38, 37, 37, 34, 38, 38, 33, 32, 33, 33, 33, 37, 37, 32, 32, 29, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSASYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGDDYYGGAPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGDIYPSASYTNYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTRGDDYYGGAPYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3060 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7302:4558 (reversed)", "sequence" : "GATCGACGTGATGTTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACGACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACAAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGGGACCAGGGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCTATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 38, 38, 38, 38, 36, 38, 38, 38, 36, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDFA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMGLARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { 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"min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "53" }, { "name" : "Source-Identity", "value" : "81.97%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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: 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : 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"FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQVTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "AAYYYGSSWGFSF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVKTGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAAYYYGSSWGFSFWGQVTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3122 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7542:4605 (reversed)", "sequence" : "ATTTCAGGTTCAGCTCCAGCAATCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGCAATTTCAAGGATAAAGCCACACTGACTACAGACAAGTCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGGGGGGAGGCTAACTGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCTTGTTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 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"EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLNGNNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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"sequence" : { "name" : "ERR346596.3129 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18845:4609 (reversed)", "sequence" : "AGGCGAGGTGCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTTGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCTTATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 30, 30, 32, 32, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 33, 17, 37, 34, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 34, 38, 39, 39, 38, 39, 39, 38, 36, 38, 37, 39, 39, 39, 37, 39, 37, 38, 39, 39, 35, 38, 37, 38, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 31, 37, 35, 38, 20, 38, 38, 38, 39, 39, 39, 39, 35, 37, 30, 38, 39, 38, 37, 38, 39, 39, 39, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSFVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLYGNYAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { 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] } ] }, { "sequence" : { "name" : "ERR346596.3130 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14658:4609 (reversed)", "sequence" : "TTTGCAGGTCCAGCTGCAGCAATCTAGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAGTCCTAGCAACGGTCGTTCTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCGGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGATCGGAGTTACGACGAGGGGGCTATGCTTTGGACTACTGGGGTCTGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTCATCCTGCGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 18, 37, 35, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 39, 39, 33, 38, 39, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 33, 37, 39, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 33, 38, 31, 38, 18, 37, 38, 38, 39, 38, 35, 38, 37, 39, 39, 39, 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37, 37, 38, 37, 36, 39, 36, 36, 36, 36, 36, 36, 38, 37, 37, 16, 16, 37, 18, 30, 39, 39, 39, 39, 39, 39, 37, 36, 17, 32, 38, 38, 38, 34, 36, 32, 30, 34, 38, 38, 37, 34, 37, 37, 30, 32, 18, 35, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSRAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISPSNGRS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSELRRGGYALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.73%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.20%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGFRAAYLDYWGKGTSVSVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "GG" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AY392864" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSRAELVKPGASVKLSCKASGYSFTSYWMHWVKQRPGQGLEWIGEISPSNGRSNYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVYYCTRSELRRGGYALDYWGLGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3131 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21810:4610 (reversed)", "sequence" : "GTGACAGGTTCAGCTGCAGCAATCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCTAAGAGCGGGTATGGTAAAGAGGGTCATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 37, 37, 37, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 36, 37, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 36, 38, 37, 38, 37, 39, 38, 39, 38, 38, 38, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GHTFTSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADRSSSTAYMQLSSLASENSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSDDGFPYSFDS" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, 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"Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WEPLNWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WEP" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : 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"TTAGGAAGTGAAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCTTCACAGACCCTGTCCGTCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATAATGGCTGGCGGAAGCACAAATTACTATTCGGCTCCCATGTCCAGACTGAGCATCAGCAAAGACAACACCAAGAGCCAATTTTTCTAAAAAATGAATCTTCTGCAAAAGGATGCGACAGCCATTTACTACGGTACCAGATATTACTACGGCTTACTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 16, 37, 38, 38, 38, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 36, 39, 39, 39, 15, 33, 32, 36, 38, 14, 36, 38, 16, 38, 39, 39, 16, 38, 39, 39, 39, 39, 38, 39, 16, 14, 33, 38, 36, 38, 17, 37, 39, 38, 16, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 33, 38, 32, 14, 37, 38, 35, 37, 37, 38, 39, 39, 39, 39, 39, 32, 33, 16, 37, 35, 38, 36, 16, 36, 35, 17, 17, 37, 36, 37, 38, 36, 37, 34, 38, 14, 31, 36, 34, 36, 33, 38, 39, 35, 16, 16, 27, 15, 37, 15, 15, 33, 15, 32, 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29, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQTLSVTCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYYSAPMSRLSISKDNTKSQFF*KMNLLQKDATAIYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IMAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRYYYGLLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQTLSVTCTVSGFSLTSYGVHWVRQSPGKGLEWLGVIMAGGSTNYYSAPMSRLSISKDNTKSQFF*KMNLLQKDATAIYYGTRYYYGLLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3150 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7058:4631 (reversed)", "sequence" : "TCGAGAGGTAAACCTTCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCGATTACTGTGCTACCTATTACTACGGTAGTAGCTGGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCTATCCCTTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 33, 20, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 32, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 35, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 35, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 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37, 38, 37, 37, 34, 38, 37, 37, 32, 32, 32, 32, 30, 35, 32, 32, 32, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNLQESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVDYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATYYYGSSWGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, 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"CTTCGAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTAGAGAGTCCCTGAAATTTTCCTGTGAATCCAATGAATACGAATTCCCTTCCCATGACATGTCTTGGGTCCGCAAGACTCCGGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTGATGGTGGTAGCACCTACTATCCAGACACCATGGAGAGACGATTCATCATCTCCAGAGACAATACCAAGAAGACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCTTGTATTACTGTGCAAGACTCACTATGGTTACGTGGAAAATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCTTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 33, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 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38, 38, 38, 37, 38, 37, 38, 38, 37, 36, 37, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVHLVESGGGLVQPRESLKFSCESN" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MSWVRKTPEKRLELVAA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EYEFPSHD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDTMERRFIISRDNTKKTLYLQMSSLRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INSDGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 334, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGESLKLSCESN" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MPWVRKTPEKRLELVAA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : 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32, 37, 34, 37, 38, 17, 37, 34, 32, 33, 33, 37, 37, 32, 32, 32, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 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"sequence" : "ACACGAGGTTCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGATCCTGTCCATCACTTGCACTGTCTCTGGCTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTTCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCCCAGCCAAAACGACACCCCCATCAGTTTATCCCCTGTTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 30, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 20, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 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38, 37, 37, 32, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQILSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"ERR346596.3036 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19343:4543 (reversed)", "sequence" : "ATTACAGGTGCAACTGGTGGAGTCAGGACCAGGCCTGGTGGCGCCGTCGCACAGCCTGTCCATCACCTGCACCGTCTCAGGGTTCTAAATAACCGACTCTGGTGTAAACTGGGTTCGACAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATTATATGGGATGATGGAAGTATAGACTATAATTAAGCTATCAAATCCAGCATGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACATTCTGCAAACTGCCGACACAGCCAGGTACTACTGTGTCATTTCTTCGAACGGGGACCGTGGGGATCTACTTGCTTACCGGGGCCAAGGCACTCCCGTCCCAGTCCCGGCAGCCAAACCGACACCCCCATCAGCTCATCCACTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 16, 33, 37, 37, 37, 16, 34, 37, 16, 16, 33, 16, 16, 16, 32, 32, 37, 16, 16, 37, 38, 35, 15, 37, 15, 37, 15, 37, 15, 33, 37, 37, 15, 32, 16, 32, 15, 15, 32, 14, 32, 14, 32, 14, 14, 14, 14, 14, 14, 33, 14, 14, 33, 15, 16, 33, 16, 17, 31, 35, 16, 31, 15, 33, 38, 29, 37, 16, 37, 29, 15, 14, 37, 38, 35, 17, 29, 37, 39, 38, 39, 33, 17, 17, 16, 33, 33, 16, 31, 16, 29, 14, 29, 14, 14, 16, 33, 16, 33, 27, 37, 36, 17, 37, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8940:4651 (reversed)", "sequence" : "AGCTGAGGTCCAGCTGCAACAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCAGCTATGGTGTAAGCTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGACGGGAGCACAAATTATCATTCAGCTCTCATATCCAGACTGAGCATCAGCAAGGATAACTCCAAGAGCCAAGTTTTCTTAAAACTGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCCAAAGAGGTATGGTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCCATCCCCTGGTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 36, 35, 37, 37, 38, 39, 39, 39, 39, 39, 39, 18, 37, 37, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 39, 16, 37, 38, 37, 39, 39, 39, 39, 39, 37, 38, 37, 18, 37, 30, 38, 38, 39, 39, 18, 31, 33, 37, 39, 39, 39, 36, 39, 39, 39, 38, 38, 38, 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39, 39, 39, 38, 37, 36, 32, 36, 36, 19, 20, 37, 33, 37, 38, 32, 19, 32, 17, 29, 30, 35, 32, 32, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"AAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 34, 31, 37, 37, 37, 37, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 35, 35, 37, 39, 37, 39, 38, 39, 37, 39, 37, 37, 39, 38, 39, 39, 39, 39, 39, 37, 38, 38, 39, 37, 37, 38, 37, 38, 38, 37, 39, 39, 35, 34, 33, 39, 33, 36, 17, 36, 37, 32, 36, 36, 32, 38, 39, 37, 37, 36, 32, 38, 38, 39, 38, 36, 36, 16, 30, 16, 29, 36, 30, 34, 37, 34, 31, 33, 38, 36, 37, 37, 38, 37, 37, 36, 38, 37, 38, 36, 37, 39, 39, 35, 37, 33, 38, 37, 37, 38, 30, 38, 33, 36, 36, 39, 36, 22, 38, 39, 38, 37, 38, 37, 35, 38, 37, 39, 38, 39, 39, 36, 30, 37, 33, 16, 37, 37, 38, 37, 39, 37, 38, 39, 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"ERR346596.3086 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7700:4574 (reversed)", "sequence" : "TCGGGATGTGAAGCTTCAGGAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGACCGCGGGGCTACAGGGCTTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGGACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 32, 33, 33, 33, 33, 32, 32, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 35, 37, 33, 38, 39, 39, 39, 39, 34, 39, 39, 33, 37, 36, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 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"QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3092 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19293:4578 (reversed)", "sequence" : "AGAAGAGGTGCAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCGTCTGGTTACTCATTCACTGTCTACTACATGCACTGGGTGAAGCAAAGCCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCTTTATAATGGTGCTACTACCTACAACCAGAATTTCAAGGACAAGGCCAGCTTGACTGTAGATAAGTCCTCCAGCACAGCCTACACGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGAGGGTTACTACGTGATTGGACTATTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGCGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 37, 37, 34, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 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38, 38, 38, 39, 39, 37, 36, 39, 39, 39, 39, 39, 37, 38, 37, 18, 33, 33, 37, 38, 16, 37, 16, 38, 34, 38, 39, 38, 37, 38, 37, 36, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 37, 37, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 37, 38, 33, 32, 33, 33, 35, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTVYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQNFKDKASLTVDKSSSTAYTELHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INLYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRVTT*LDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "LDYWGQGTSVNVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M24786" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKISCKASGYSFTVYYMHWVKQSHVKSLEWIGRINLYNGATTYNQNFKDKASLTVDKSSSTAYTELHSLTSEDSAVYYCARRVTT*LDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3094 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21421:4578 (reversed)", "sequence" : "GTTGGACGTGAAGCTGGTGGAGTCAGGACCTGGCCTTGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCCTTGGCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 34, 34, 37, 37, 34, 34, 34, 34, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 20, 35, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 37, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 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38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 36, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 175, "max" : 288, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 174, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 319, "max" : 351, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 289, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 351, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 351, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] } ] }, { "sequence" : { "name" : "ERR346596.3095 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10334:4579 (reversed)", "sequence" : "CGGCGAGGTGCAGCTCCAGCAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAACTACAGTGGTAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTCTGCAAAAGGGACTCCGTATGGTAACTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCTTATCCCTTGAGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 36, 37, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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: "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSSFSTYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYPASVKGRFTISRDNSKHTLYLQMSSLRSEDAAICYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "57" }, { "name" : "Source-Identity", "value" : "80.61%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ELQLQQSRMPSSD*KKTLKLSCAASGSSFSTYAMSWVRQTPEKRLEWVATITSGCTYTYYPASVKGRFTISRDNSKHTLYLQMSSLRSEDAAICYCARTPYYKYDDYDAMEYWGRGNTFTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3099 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18436:4583 (reversed)", "sequence" : "AGGGCAGGTGCAGCTGAAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAACATCAAGGGCAAGGCCACACTGACTGCAGACAAGGCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGAGGGGCATGGTAACTACGGTTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 30, 35, 37, 37, 37, 37, 35, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 34, 38, 38, 39, 39, 39, 37, 36, 37, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 37, 37, 39, 39, 38, 37, 36, 37, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 34, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 16, 38, 39, 39, 39, 39, 37, 39, 39, 39, 33, 19, 37, 38, 39, 39, 39, 39, 32, 38, 39, 39, 39, 39, 39, 18, 37, 36, 38, 38, 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38, 38, 38, 38, 37, 34, 38, 34, 34, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNENIKGKATLTADKASSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGHGNYGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.40%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNENIKGKATLTADKASSTAYMQLSSLTSEDSAVYFCAREGHGNYGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3100 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9172:4583 (reversed)", "sequence" : "TTACCAGGTCCAACTACAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACGCGTTCACCAGTTACTGGATGAATTGGGTTAAGCAGAGGCCTGAGCAAGGCCTTGAGTGGATTGGAAGGATTGATCCTTACGATAATGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCATATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAATTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAGACCTTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCGGCCAAAACAACACCCCCATCTGTTCATCCATTGGCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 36, 37, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 38, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 37, 36, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNQKFKDKAILTVDKSSSTAYMQFSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPYDNET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREDLYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVRPGASVKLSCKASGYAFTSYWMNWVKQRPEQGLEWIGRIDPYDNETHYNQKFKDKAILTVDKSSSTAYMQFSSLTSEDSAVYYCAREDLYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3102 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22114:4587 (reversed)", "sequence" : "TAGCCAGGTCCAGCTTCAGCAATCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAGGGGCAAGGCCACACTGACTGTAGACACATCCTCCAACACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATCCTATAGGTTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTTATCCATTGCTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 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(294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : 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"AGGCCAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGGGGCTATAGGTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 37, 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38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 31, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRGYRYDGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3107 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39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 37, 39, 39, 36, 37, 39, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 39, 39, 39, 36, 35, 38, 37, 38, 39, 39, 36, 35, 35, 39, 37, 38, 38, 38, 39, 36, 36, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 39, 38, 39, 37, 35, 39, 39, 38, 39, 39, 38, 38, 37, 39, 38, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 37, 38, 33, 38, 39, 39, 39, 39, 39, 39, 38, 39, 33, 38, 39, 38, 39, 39, 37, 37, 39, 39, 38, 38, 34, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 36, 39, 38, 39, 39, 38, 39, 39, 37, 37, 38, 37, 33, 37, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 39, 38, 36, 37, 38, 38, 38, 38, 38, 38, 36, 37, 39, 39, 39, 38, 38, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 33, 38, 37, 38, 36, 33, 33, 33, 33, 33, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVKLEESGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKDKAKLTAVTPAITAYMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYPGNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRSDYGKKAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 284, "max" : 291, "direction" : "Right", "truncatedMin" : 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"CACCGAGGTGCAGCTTCAGGAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGTATTGGTGCTATTTATCCTGGAAATAGTGATACTACCTACAACCAGCAGTTCAAGGGCAAGGCCAAACTGACTGCGGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAGATTGGGCCATTACTACGGCTACATCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCTTGGCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 33, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 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37, 38, 38, 38, 38, 38, 37, 37, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQRPGQGLECIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGTVLARPGASVKMSCKASGYSFTSYWMHWVKQRPGQGLECIGAIYPGNSDTTYNQQFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYCTRLGHYYGYIFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3109 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8511:4591 (reversed)", "sequence" : "GGTTGAGGTCCAACTGCAACAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTAATGACACAGCCATATATTACTGTGCCAGAAAAAGGTACGACGAGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTTCATCCCCTGTTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 35, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 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32, 32, 33, 33, 33, 37, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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"Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCARKRYDEYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3110 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12534:4591 (reversed)", "sequence" : "TATCCAGGTTCAGCTTCAGCAATCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGTCTACAAACAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCAACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGCGCCGCATATGGTTACTACCTCGGGCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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"GGGTGATGTGCACCTGGTGGAGTCTGGGGCAGAGCTTGCGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGTGAATTGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAAACCCTCTTTTTACTACGGTAGTAGTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTTATCCCCTGCGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 29, 32, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 33, 34, 32, 38, 38, 39, 39, 38, 39, 38, 34, 36, 37, 36, 38, 38, 39, 39, 39, 37, 39, 38, 38, 38, 37, 38, 37, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 35, 38, 37, 35, 38, 39, 39, 39, 39, 39, 36, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 36, 39, 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39, 36, 36, 36, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 37, 38, 37, 38, 29, 30, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGAELAKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TKPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { 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"value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGAELAKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPVNCDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTKPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3114 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12296:4594 (reversed)", "sequence" : 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33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.56%" } ] }, { "name" : "D-REGION", "type" : 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: { "name" : "ERR346596.3118 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16184:4602 (reversed)", "sequence" : "CCGGGAGGTGCAGCTGCAGCAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAGACAAACTGGAATGGATGGGCTACATACACTACAGTGGTACCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAATTCTTCCTGCAGTTGAATTCTGTGACTTCTGACGACACAGCCACATATTACTGTGCAAGACAGAATGATGGTTACCTCTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCTTGCGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 30, 32, 35, 17, 32, 32, 33, 37, 37, 38, 38, 38, 38, 37, 36, 32, 32, 37, 38, 39, 39, 33, 37, 39, 37, 37, 39, 37, 39, 38, 39, 34, 38, 34, 38, 39, 39, 39, 39, 34, 39, 39, 39, 37, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 36, 37, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 35, 37, 33, 38, 18, 18, 38, 39, 39, 38, 34, 37, 38, 18, 33, 18, 38, 36, 37, 38, 37, 38, 39, 19, 36, 16, 32, 33, 37, 39, 39, 37, 39, 38, 18, 37, 34, 36, 38, 38, 38, 38, 36, 37, 38, 39, 38, 37, 37, 14, 37, 36, 37, 39, 15, 33, 14, 38, 38, 39, 37, 37, 35, 37, 36, 33, 37, 16, 14, 14, 37, 37, 15, 15, 37, 37, 37, 38, 37, 34, 38, 37, 39, 39, 38, 39, 37, 39, 39, 38, 38, 39, 39, 39, 37, 37, 39, 39, 39, 39, 38, 39, 39, 38, 34, 32, 36, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 27, 35, 36, 36, 36, 37, 34, 38, 38, 39, 39, 38, 38, 38, 39, 38, 38, 36, 39, 38, 37, 38, 38, 39, 37, 37, 37, 39, 38, 37, 38, 38, 38, 38, 38, 38, 38, 33, 37, 39, 38, 38, 39, 39, 38, 38, 39, 38, 38, 39, 39, 38, 39, 37, 37, 38, 37, 35, 39, 39, 33, 38, 38, 37, 39, 38, 39, 38, 37, 35, 38, 38, 37, 38, 37, 37, 39, 38, 39, 39, 39, 39, 39, 38, 35, 38, 37, 39, 37, 39, 39, 38, 33, 37, 38, 37, 38, 38, 35, 39, 38, 35, 35, 38, 39, 38, 37, 39, 39, 36, 36, 39, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 38, 38, 39, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 37, 38, 38, 38, 39, 36, 39, 38, 38, 33, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 35, 33, 33, 33, 33, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGDKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTSDDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQNDGYLYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGDKLEWMGYIHYSGTTNYNPSLKSRISITRDTSKNQFFLQLNSVTSDDTATYYCARQNDGYLYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3119 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24452:4602 (reversed)", "sequence" : "ACTGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGCCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTCATCCCTTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 37, 38, 38, 38, 38, 38, 39, 39, 20, 33, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 38, 37, 39, 37, 37, 36, 36, 36, 37, 38, 39, 37, 36, 18, 32, 18, 32, 33, 33, 33, 37, 38, 33, 38, 39, 39, 39, 18, 33, 35, 35, 33, 32, 33, 33, 38, 37, 39, 39, 37, 39, 39, 38, 39, 38, 37, 37, 36, 37, 39, 33, 38, 39, 31, 37, 33, 33, 38, 39, 39, 39, 38, 39, 39, 39, 33, 31, 30, 37, 37, 38, 38, 39, 38, 38, 39, 37, 37, 37, 38, 38, 38, 36, 38, 37, 37, 38, 39, 39, 37, 39, 37, 36, 37, 37, 39, 39, 38, 38, 39, 39, 39, 38, 38, 37, 38, 39, 38, 37, 39, 34, 35, 35, 37, 38, 37, 33, 37, 38, 24, 26, 27, 33, 38, 24, 27, 35, 35, 34, 23, 37, 37, 37, 37, 32, 34, 37, 34, 38, 37, 38, 38, 37, 37, 33, 38, 33, 35, 28, 34, 34, 25, 34, 38, 34, 38, 38, 38, 38, 18, 39, 34, 34, 38, 39, 38, 35, 25, 15, 26, 39, 38, 37, 33, 37, 38, 33, 38, 37, 39, 39, 38, 35, 27, 37, 37, 39, 37, 37, 39, 38, 27, 16, 34, 33, 39, 39, 38, 38, 38, 39, 37, 38, 37, 26, 39, 33, 39, 39, 39, 38, 37, 33, 35, 38, 31, 27, 15, 37, 31, 35, 17, 38, 33, 39, 39, 37, 29, 17, 35, 31, 30, 18, 37, 37, 36, 37, 39, 38, 37, 35, 39, 39, 38, 37, 38, 37, 30, 36, 39, 38, 37, 38, 34, 38, 39, 39, 35, 38, 39, 39, 38, 33, 39, 39, 39, 39, 37, 39, 37, 38, 37, 37, 37, 39, 37, 39, 39, 37, 37, 37, 38, 37, 38, 38, 38, 38, 36, 37, 39, 39, 39, 39, 37, 38, 38, 37, 38, 36, 36, 32, 32, 36, 36, 38, 38, 38, 39, 36, 39, 38, 39, 37, 38, 39, 39, 38, 39, 39, 38, 37, 33, 37, 38, 37, 32, 38, 36, 38, 39, 37, 37, 38, 38, 37, 38, 38, 38, 37, 34, 37, 32, 33, 33, 37, 32, 32, 32, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGAGTTATVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTATVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3120 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7936:4603 (reversed)", "sequence" : "GAGGCAGGTTCAGCTCCAGCAATCTGGACCTGAACTGGTGAAGCCTGGGGCCTTCAGTGAAGATCTCCTGCACAGGTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGCGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTCCAATGGGAGGTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAGATCTGCATACTACGGTAGTAGTTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCATTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 37, 33, 38, 38, 37, 38, 32, 33, 37, 38, 39, 38, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 18, 33, 36, 35, 38, 39, 39, 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{ "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAPYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3205 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14741:4672 (reversed)", "sequence" : 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34, 38, 39, 38, 37, 38, 38, 38, 37, 38, 38, 38, 34, 33, 32, 33, 33, 32, 33, 33, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 4, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" 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"value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 4, "max" : 369, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3206 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16760:4673 (reversed)", "sequence" : 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37, 33, 33, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAALVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ANYYYGSHFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSYYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 157, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 328, "max" : 360, "direction" : "Right", "truncatedMin" : false, 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"IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 360, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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"QVQLKESGGGLGQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWLAEIRTKANNHATYYAESVKGRFTISRDDSTSTVYLQMNSLRAEDTGIYFCTRERGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3066 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7867:4561 (reversed)", "sequence" : "TATGGAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAAGTAGCTATGGTGTAAGCTGGGTTCGCCAGCCTCCAGGAGAAGGTCTGGAGTGGCTGGGAGTAATCTGGGGTGACGGGAGCACAAATTATCATTCAGCTCTCATATCCAGACTGAGCATCAGCAAGGATAACTCCAAGAGCCAAGTTTTCTTAAAACTGAACAGGCTGCAACCTGATGACACAGCCACGTACTACTGTGCCAAAGCCAACCGCTACGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCATTGCAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 33, 33, 33, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 38, 34, 36, 39, 36, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 36, 37, 38, 38, 38, 38, 32, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 38, 37, 39, 39, 38, 39, 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38, 37, 34, 38, 38, 38, 39, 38, 37, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 36, 39, 39, 38, 37, 38, 38, 38, 38, 37, 36, 38, 38, 36, 38, 33, 38, 39, 39, 36, 16, 39, 39, 38, 37, 39, 38, 37, 37, 36, 32, 38, 39, 37, 38, 37, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWVRQPPGEGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYHSALISRLSISKDNSKSQVFLKLNRLQPDDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKANRYGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : 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39, 38, 39, 38, 38, 37, 37, 38, 38, 39, 36, 34, 36, 36, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFRSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, 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}, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" 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"TACTGAGGTGCAGCTGGTGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTATAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAACACAGCCTACATGGAACTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGATTACTACGGCCCTTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCGTCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 36, 37, 37, 39, 39, 38, 37, 39, 39, 37, 39, 38, 38, 37, 39, 39, 38, 39, 36, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 36, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 36, 34, 38, 38, 39, 39, 39, 39, 38, 33, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 37, 36, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSNTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREDYYGPYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSNTAYMELSSLTSEDSAVYYCAREDYYGPYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3074 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13164:4565 (reversed)", "sequence" : "AAAAGAGGTGATGCTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTAACTACTGGCTAGGTTGGTTAAAGCAGAGGCCTGGACATGGACTTGAGTGGATTGGAGATATTTACCCTGGAGGTGTTTATTCTAACTGCAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCTCTGCCTACATGCAGCTCAGTAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCAACTTGGGGTCCGTACTACTTTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGTACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 33, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 7, 39, 39, 39, 39, 38, 34, 38, 28, 36, 39, 39, 39, 39, 34, 37, 33, 39, 39, 37, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 35, 37, 39, 39, 39, 30, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 33, 37, 38, 39, 37, 33, 39, 39, 39, 39, 39, 37, 38, 37, 37, 39, 36, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 37, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 37, 39, 38, 38, 34, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 36, 39, 37, 37, 38, 36, 34, 37, 34, 37, 38, 38, 39, 36, 32, 39, 39, 39, 38, 39, 39, 37, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 33, 32, 33, 33, 37, 37, 37, 32, 29, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVRPGTSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LGWLKQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NCNEKFKGKATLTADTSSSSAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGGVYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATWGPYYFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "53" }, { "name" : "Source-Identity", "value" : "81.97%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVRPGTSVKISCKASGYTFTNYWLGWLKQRPGHGLEWIGDIYPGGVYSNCNEKFKGKATLTADTSSSSAYMQLSSLTSEDSAVYFCATWGPYYFAYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3075 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19259:4568 (reversed)", "sequence" : "AATTGATGTGCAACTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGTACTGTCACTGGCTACTCCATCACCAGTGCTTGTAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTAAATACACTACAGTTGTAGCAATAACTATAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGCGACTCCACCAGGAACCAGTTCTTAATGCAGTAGAATTCTGTGACTCCTGAGGACACGGCCACATATTACTGTGCAGGAAGGGGGGCTACCCACTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCACTGAGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 29, 16, 32, 37, 37, 37, 37, 37, 18, 35, 16, 37, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 16, 35, 33, 37, 34, 39, 39, 39, 15, 38, 39, 39, 39, 39, 39, 39, 37, 37, 16, 33, 38, 15, 38, 39, 33, 39, 39, 39, 16, 32, 33, 37, 39, 35, 38, 39, 39, 39, 39, 39, 34, 38, 15, 38, 39, 38, 37, 39, 39, 39, 39, 39, 37, 39, 35, 39, 39, 32, 38, 16, 37, 38, 39, 16, 16, 37, 16, 33, 38, 39, 37, 15, 31, 33, 16, 35, 31, 38, 38, 16, 17, 17, 31, 33, 37, 14, 15, 31, 15, 29, 15, 15, 31, 37, 39, 32, 36, 36, 38, 34, 29, 29, 17, 17, 29, 37, 16, 15, 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37, 32, 16, 32, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMG*" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.15%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGWDYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { 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"GTCCTGCGTGTAGCGAACTGCGATGGGCATACTGTAACCATAAGGCCACGTATTTTGCAAGCTATTTAACTGGCGGCGATTGCGTACCCGACGACCAAAATTAGGGTCAACGCTACCTGTAGGAAGTGTCCGCATAAAGTGCACCGCATGGAAATGAAGACGGCCATTAGCTGTACCATACTCAGGCACACAAAAATACTGATAGCAGTCGGCGTGTGAATCATTAGCCTTGCGACCCTCGGCAGCAAGAACCAGACGACCAATATCACGAAAATAGTCACGCAAAGCATTGGGATTATCATAAAACGTCTCTAATCGGTCGTCAGCCAACGTGAGAGTGTCAAAAACGATAAACCAACCATCAGCATGAGCCTGTCGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 31, 32, 37, 37, 33, 33, 33, 32, 37, 33, 38, 37, 34, 37, 38, 37, 38, 38, 37, 38, 39, 32, 33, 38, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 38, 39, 38, 39, 36, 36, 38, 38, 39, 38, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 36, 38, 38, 38, 38, 36, 38, 38, 36, 30, 36, 38, 38, 39, 38, 38, 37, 38, 38, 38, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 36, 34, 38, 39, 39, 39, 35, 38, 37, 37, 38, 39, 39, 39, 39, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 33, 33, 33, 35, 35, 39, 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASVKISCKASGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCAKRGYGKEGHYYPMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3288 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9842:4742 (reversed)", "sequence" : "CAGCCAGGTGCAGCTGAAGGAGTCTGAGTCCACACACCACTCCTGGTCCCAGAAGTCACGGCAAGCACTGAGAATTCTCCCTCAGAAAATGTGACAGGGGGAAGAGAAGGACACTTTCCTTTGTGTTGCTCCCCCCTGACTGGTTAGATGAGGTGTCCTCCTCACAATGTGGTCCCCCTTGCCCTCTATGGGGTACTCACTCGGCCTGTAGAAAGAGCTCCTTGTTGAAAGGCTTGTGTCCACACTTGTTTCTCTTCCCCCATCAGCTCATCCATTGTTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 109, "max" : 123, "direction" : "Left", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "1" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 124, "max" : 254, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 27, "max" : 59, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "VTSGTRSGVWT" } ] }, { "name" : "V-REGION", "type" : "gene", 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKELGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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"Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : 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"GATTCAGGTCCAACTACAGCAGCCTGGACCTGAGCTAGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTGTGGTTACTCATTCACTGGTTACTACATGCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAGTTGTTACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTTACTGTAGACACATCCTCCAGCACAGCCTACATGCAGTTCAACAGCCTGACATCTGAAGACTCTGCGGTCTATTACTGTGCAAGATCTTGCGGGGCTTATGGTTACGACGGGGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGTCCATCCCCTGTCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 18, 32, 33, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 38, 37, 39, 39, 39, 34, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 39, 39, 38, 39, 20, 38, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 33, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 17, 38, 39, 39, 39, 39, 38, 39, 39, 39, 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"EVQVVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3292 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15362:4746 (reversed)", "sequence" : "GGTCGAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCTTGCAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 18, 35, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 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"TGGGGAGGTTCAGCTGCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAGCTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAATGGTTACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGCCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 36, 39, 39, 39, 38, 38, 38, 39, 38, 39, 37, 39, 38, 37, 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32, 32, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNSDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TNGYDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : 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38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3297 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9417:4750 (reversed)", "sequence" : "GGAGGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAATGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAAGACACGGCCATGTATTACTGTACAAGATCGGGGACATTAGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 34, 33, 34, 32, 33, 37, 37, 37, 38, 38, 38, 38, 32, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 38, 38, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 37, 39, 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37, 37, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGDYYGSSDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, 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38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 38, 37, 39, 37, 38, 37, 39, 39, 37, 37, 35, 37, 38, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 36, 38, 38, 38, 38, 39, 38, 39, 38, 38, 39, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" 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"CAGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCACCTCTCAAATCCAGACTGAGCATCAGTAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGTACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACTTAACTGGGACGAGGGGGACTACTGGGGCCAAGGCACCACTCCCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCTTGACGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 34, 32, 38, 39, 39, 20, 35, 37, 38, 34, 39, 38, 39, 38, 32, 39, 39, 38, 39, 38, 37, 30, 17, 36, 36, 36, 37, 38, 37, 34, 38, 39, 39, 38, 37, 37, 38, 39, 37, 37, 37, 39, 37, 39, 37, 39, 39, 38, 39, 39, 37, 39, 39, 33, 38, 37, 39, 37, 39, 39, 37, 37, 38, 38, 34, 38, 33, 38, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 37, 38, 39, 39, 38, 37, 18, 37, 38, 39, 33, 38, 39, 39, 38, 36, 39, 39, 38, 38, 34, 36, 37, 36, 38, 38, 39, 39, 39, 33, 38, 38, 34, 34, 37, 39, 38, 30, 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32, 33, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSPLKSRLSISKDNSKSQVFLKMYSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTPTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKLNWDEGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 4, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : 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"codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPKGSLKLSCAASGFTFNTNAMNWVRQAPGKGLEWVARIRSKSNNYATYYVDSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVVYRYDDEYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3227 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7915:4689 (reversed)", "sequence" : "ATCCCAGGTTCAGCTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAGTGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTCATCCCTTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 34, 34, 38, 39, 39, 39, 37, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 32, 38, 37, 39, 39, 39, 37, 39, 39, 39, 33, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 37, 38, 33, 37, 38, 39, 39, 39, 39, 20, 37, 38, 37, 38, 36, 39, 39, 39, 39, 39, 39, 19, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 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39, 38, 38, 38, 36, 38, 38, 38, 37, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNSGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3228 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21514:4689 (reversed)", "sequence" : "AGCGGAGGTGCAGGGGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATTGTGTACACTGGGTTCGCCAGCCTCCAGGAAGGGGTCTGGAGTGGCTGGGAGTTATATGGGCTGGTGGAGGCACAAATTATAATTCGGCTCTCGTGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGCCTCCAAACTGATGACACAGCCATGTACTACTGTGGCACATCCTACTATGGTACCTACTTGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACTCCCATCAGCCCATCCCCTGGCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 35, 33, 33, 33, 37, 37, 38, 34, 30, 37, 38, 38, 38, 38, 38, 38, 39, 39, 33, 38, 38, 37, 36, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 30, 37, 36, 38, 38, 38, 38, 36, 39, 38, 39, 39, 36, 37, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 38, 37, 39, 39, 39, 39, 35, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 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38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGRGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYC" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALVSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GTSYYGTYLYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGNYGDAMDYWGQGTSVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYGNY" }, { "name" : "IMGT_allele", "value" : "IGHD2-10*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-10" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGPGLVAPSQSLSITCTVSGFSLTSYCVHWVRQPPGRGLEWLGVIWAGGGTNYNSALVSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCGTSYYGTYLYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3229 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12227:4690 (reversed)", "sequence" : "TGATCAGGTCCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATACTACCGATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCACTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 36, 34, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYRYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYRYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3230 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12534:4690 (reversed)", "sequence" : "CTCGGAGGTGCAGCTTCAGCAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAGTGGTTACACAACAGACTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGGGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAATATGGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCCCTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKASGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREYGYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDDAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGIYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : 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"EVQVVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGTNTYYPDSVKGRFTISRDDAKNTLYLQMSSLKSEDTAMYYCTRRGIYDERTAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3238 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20446:4701 (reversed)", "sequence" : "AAACGAGGTGAAGCTTCAGGAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTATCTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCTAGACTGACCATCAGCAAGGACAATTCCAAGAGCCAAGTCTTCTTTAAAATGACCAGTCTACAAGCTAATGACACAGCCATATATTACTGTGCCAGAAACCACAGGGGCTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCACTGACGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 33, 33, 32, 33, 33, 33, 37, 33, 38, 34, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 20, 35, 33, 33, 32, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 36, 39, 38, 38, 38, 37, 39, 33, 33, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 18, 37, 38, 39, 39, 34, 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39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 35, 38, 39, 39, 37, 39, 39, 38, 39, 37, 38, 39, 37, 38, 38, 38, 38, 38, 39, 39, 38, 34, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 34, 38, 38, 38, 38, 36, 38, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 18, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFISRLTISKDNSKSQVFFKMTSLQANDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGWDYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GG" }, { "name" : "allele", "value" : "IGHD-ST4*01" }, { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPGLVQPSQSLSITCTVSGFSLSSYGVHWVRQSPGKGLEWLGVIWSGGSTDYNAAFISRLTISKDNSKSQVFFKMTSLQANDTAIYYCARNHRGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3239 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14715:4703 (reversed)", "sequence" : "TGGTGATGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGACTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGAGATGATTACGACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCCTTGGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 37, 38, 38, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 38, 39, 38, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 33, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 38, 38, 37, 37, 38, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 39, 37, 39, 39, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 35, 38, 38, 38, 37, 39, 39, 39, 38, 39, 38, 37, 37, 32, 32, 37, 20, 37, 39, 38, 39, 36, 34, 36, 37, 37, 36, 34, 37, 38, 39, 39, 37, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 38, 38, 38, 38, 37, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQTPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDDYDYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQTPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARDDYDYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3240 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12561:4703 (reversed)", "sequence" : "GGCTCAGGTTCAACTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAATTATAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTACGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTTTATCCATTGAATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 37, 39, 37, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 38, 39, 37, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 37, 33, 37, 37, 39, 39, 25, 39, 39, 37, 38, 39, 37, 39, 39, 37, 37, 38, 39, 39, 16, 37, 37, 33, 38, 39, 39, 38, 37, 39, 38, 38, 39, 38, 37, 39, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 37, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 36, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 37, 36, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 36, 39, 38, 39, 39, 38, 38, 38, 38, 34, 38, 39, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 34, 38, 38, 39, 37, 33, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 37, 37, 36, 39, 39, 39, 38, 38, 35, 37, 38, 38, 39, 39, 39, 39, 34, 39, 38, 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"AGGTGAGGTGCAGCTGGTGGAGTCAGGACCTGGCCTAGTGAAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTACCTATGGTTTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAGGCACAGACTATAATGCAGCTTTCATATCCAGACTGATCATCACCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAACTAATGACACAGCCATGTATTACTGTGCCAGAAAGGGTTACACGGGGTACTCCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 33, 37, 37, 37, 37, 34, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 37, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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37, 37, 37, 32, 29, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVKPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"TCAGGAGGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCGGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCACCTCAGCCAAAACAACACCCCCATCTGCTCATCCCCTGGATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 32, 33, 37, 37, 33, 37, 38, 37, 36, 36, 37, 34, 38, 32, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 37, 37, 39, 39, 39, 38, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 36, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 37, 38, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 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38, 37, 34, 32, 32, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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(294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSDFYMFWFRQTPEKRLEWVATISNGGTYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVTS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3192 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16629:4661 (reversed)", "sequence" : "TTCTGAGGTAAAGCTTCTCGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGTCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCTTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 37, 38, 37, 38, 38, 39, 39, 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38, 38, 38, 37, 33, 33, 37, 37, 37, 37, 32, 32, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLLESGGGLVKPGGSLKLSCAVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VSDGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% 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"value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLLESGGGLVKPGGSLKLSCAVSGFTFSDYYMCWIRQTPEKRLEWVATVSDGGNYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3193 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18186:4661 (reversed)", "sequence" : "GATACAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGGAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTTTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTTCAAGAGAAGAGTCGCTGGGGGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCATTGCTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 36, 36, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 37, 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"GTCAGAGGTACAGCTTCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGTTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 33, 33, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 36, 37, 38, 39, 38, 38, 39, 39, 39, 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36, 36, 38, 37, 34, 38, 37, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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39, 38, 38, 38, 34, 36, 38, 38, 38, 33, 38, 33, 33, 33, 33, 32, 19, 32, 29, 18, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"ERR346596.3338 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15316:4779 (reversed)", "sequence" : "GGTAGACGTGATGTTGGTGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGCAATTTCAAGGATAAAGCCACACTGACTACAGACAAGTCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGGGGGGAGGCTAACTGGGTACTACTTTGGCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGTCAAAACGACACCCCCATCGGCCCATCCCCTGCCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 33, 33, 33, 33, 37, 38, 38, 38, 37, 38, 32, 37, 30, 38, 19, 37, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 20, 39, 39, 39, 39, 38, 39, 37, 39, 37, 36, 39, 37, 39, 38, 37, 37, 39, 39, 38, 37, 39, 39, 38, 39, 38, 39, 37, 37, 39, 38, 39, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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18, 38, 39, 34, 39, 39, 38, 16, 16, 38, 37, 37, 16, 36, 37, 36, 36, 32, 38, 38, 39, 38, 38, 38, 36, 38, 37, 37, 37, 32, 37, 32, 17, 33, 33, 35, 31, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGRLTGYYFGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP 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39, 38, 34, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 37, 36, 32, 32, 33, 37, 37, 37, 37, 32, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IDPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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37, 33, 19, 39, 39, 38, 39, 39, 37, 34, 36, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 37, 38, 39, 38, 38, 32, 38, 38, 35, 38, 37, 37, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 37, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 34, 32, 32, 30, 33, 33, 33, 33, 33, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLPRPGTSVRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAKLTAVTSASTAYMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNSEI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TIYRYDEDAIDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"sequence" : { "name" : "ERR346596.3347 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17695:4788 (reversed)", "sequence" : "CGGAGAGGTGCAGCTTCAGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAGTCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTTATCCCCTGCATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 33, 33, 33, 32, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 38, 38, 38, 37, 37, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", 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"EVQLQQSGPELVRPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLKWIGMIDPSNSETRLNQKFMDKATLNVDKSSNTAYIQLSSLTSEDSAVYYCARNHFAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3351 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8172:4790 (reversed)", "sequence" : "CAGGAATGTCCAGCTGACGGAGTATGACGTTAATCTTCACACAGTTCTTGACTGAATAATAATCACCTTCATGGCTTCTATCTAAAGGATAAACATCATAGGCAGTCGGTGGGGGAGGCGGAGCCGAAGAAGACTCAAAGCGTAACAAACAGGCAAAAAATTTAGGATCGGCATCAAAAGCAATATTAGCACCAACAGAAACAACCTGATTAGCGGCGTTGACCGATGTATCCATCTGAATGCAATGAAAAAAACCACCATTAACAGCATTAACCGTCAAACTATCAAAATATAACGTTGACGATGTAGCTTTAGGTGTATGTAAAACAGGTGCCGAAGAAGCTGGAGTAATGGAAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 16, 16, 16, 16, 33, 18, 33, 35, 31, 38, 38, 16, 16, 33, 32, 16, 16, 15, 32, 15, 32, 18, 35, 18, 16, 33, 32, 15, 15, 32, 17, 17, 33, 17, 17, 17, 16, 35, 33, 15, 15, 32, 17, 17, 17, 16, 16, 17, 16, 16, 32, 16, 16, 35, 17, 35, 32, 17, 32, 17, 17, 16, 33, 38, 16, 16, 33, 37, 17, 35, 38, 39, 15, 15, 33, 16, 17, 17, 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"CCCAGAGGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCCATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGACTGAGGGATGGTTACTCCCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 33, 34, 34, 34, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 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38, 38, 38, 37, 33, 33, 33, 37, 33, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSHAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARLRDGYSPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3357 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16799:4796 (reversed)", "sequence" : 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32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWVKQSHGKSPEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSTTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGNWDFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 310, "direction" : "Right", "truncatedMin" : false, 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"TATCCAGGTCCAGCTGCAGCAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACGATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGAGGGACCAACTGGGACGGGGGGTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCCATCCCTTGATTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 35, 39, 38, 37, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 37, 39, 38, 39, 15, 34, 38, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 37, 38, 38, 37, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 37, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 38, 39, 38, 39, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 37, 39, 38, 39, 38, 38, 39, 39, 38, 37, 38, 38, 37, 37, 36, 38, 38, 36, 36, 36, 36, 19, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TREGPTGTGGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGRLG" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GRLG" }, { "name" : "IMGT_allele", "value" : "IGHD3-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-1" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTREGPTGTGGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3271 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13069:4726 (reversed)", "sequence" : "AGGTGAGGTGAAGCTGATGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTAACTACTGGCTAGGTTGGTTAAAGCAGAGGCCTGGACATGGACTTGAGTGGATTGGAGATATTTACCCTGGAGGTGTTTATTCTAACTGCAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCTCTGCCTACATGCAGCTCAGTAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCAACTTGGGGTCCGTACTACTTTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCATTGAAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 29, 32, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 38, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 34, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 39, 37, 39, 38, 34, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 37, 37, 34, 33, 39, 37, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 37, 36, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 35, 34, 37, 32, 32, 18, 37, 39, 39, 38, 38, 38, 39, 38, 34, 36, 36, 37, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 37, 39, 37, 37, 38, 38, 38, 38, 37, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 30, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LGWLKQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NCNEKFKGKATLTADTSSSSAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGGVYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATWGPYYFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKISCKASGYTFTNYWLGWLKQRPGHGLEWIGDIYPGGVYSNCNEKFKGKATLTADTSSSSAYMQLSSLTSEDSAVYFCATWGPYYFAYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3272 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18356:4727 (reversed)", "sequence" : "CCTGGAGGTGAAGCTGATGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTGATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGGGGCTATAGGTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTCATCCCTTGCGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 33, 37, 37, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7856:4734 (reversed)", "sequence" : "GTTGGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTCCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGATGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGACCTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGACCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGATCGGAATACTTCGGTAGTAGCTACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 33, 33, 33, 19, 35, 37, 38, 38, 37, 37, 38, 37, 38, 38, 32, 37, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 37, 39, 39, 38, 39, 39, 38, 36, 38, 38, 39, 38, 38, 39, 38, 39, 37, 37, 39, 38, 39, 39, 39, 37, 37, 39, 39, 38, 39, 39, 39, 38, 36, 39, 39, 39, 33, 38, 39, 39, 39, 39, 38, 39, 37, 37, 39, 39, 20, 35, 37, 38, 39, 38, 18, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 37, 18, 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17, 39, 33, 39, 38, 39, 39, 39, 38, 38, 38, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 36, 37, 32, 32, 33, 33, 32, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGAPVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, 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: "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGAPVKMSCKASGYTFTSYVMHWMKQKPGQGLEWIGYINPYNDGTKYNETFKGKATLTSDKSSSTAYMDLSSLTSEDSAVYFCARSEYFGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3279 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8955:4736 (reversed)", "sequence" : "CTGTCAGGTTCAGCTGCAGCAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATTAGCTACAGTGGTAACACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATATGATTACGACGGGGTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTCATCCACTGTACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 36, 18, 38, 37, 36, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 35, 39, 38, 38, 38, 37, 38, 38, 38, 37, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDYDGVDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF 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"value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TVTTFPVDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "TVT" }, { "name" : "IMGT_allele", "value" : "IGHD4-17*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-17" }, { "name" : "Source-Sequence", "value" : "AF062181" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "82.35%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYISYSGNTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARYDYDGVDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3280 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7995:4736 (reversed)", "sequence" : "AGGTGAGGTGCAGCTGCAGCAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGGTGGGCTACATAAGCTACAGTGGTAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATCGTGGTTACGACGAGGATTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCTTATCCCCTGGATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 34, 34, 32, 32, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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37, 37, 37, 33, 32, 30, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPELARPGESVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNQKFKGKATMTGDKSSSTAYMELARLTSDDSDIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ITTYSTNA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGTGPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "59" }, { "name" : "Source-Identity", "value" : "79.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, 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}, { "name" : "translation", "value" : "MHWVKQRHGKSLVWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTSYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPDLVKPGASVKISCKASGYSFTGYYMHWVKQRHGKSLVWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTSYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3311 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8964:4758 (reversed)", "sequence" : "TCGTGAAGTGCTGTTGGTGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCGCTTTTAGTGACACCTGGCTGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCCTGAGTGGGTTGCTGAGATTAGAACCAAAGCTGATGATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCATAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGTACCCCCCATCCTTTTGACTACTGGGGCCAAGGCGCCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCTGCCCATCCCTTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 29, 35, 37, 37, 16, 31, 33, 33, 38, 38, 34, 36, 37, 30, 38, 38, 39, 39, 39, 39, 39, 37, 37, 34, 30, 36, 36, 38, 37, 39, 38, 38, 39, 38, 37, 37, 33, 37, 39, 39, 39, 39, 36, 38, 38, 37, 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36, 37, 37, 18, 37, 36, 36, 37, 39, 38, 37, 38, 37, 37, 35, 39, 38, 38, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 37, 39, 39, 38, 37, 33, 39, 39, 39, 38, 39, 39, 39, 38, 38, 36, 35, 39, 38, 38, 38, 38, 38, 38, 38, 34, 32, 34, 37, 33, 33, 33, 33, 32, 37, 33, 31, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVLLVESGGGLVQPGGSMKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LDWVRQSPEKGPEWVAE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSDTW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYAESVKGRFTISRDDSISSVYLQMNSLRAEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRTKADDHAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGATLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TPHPFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP GKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVY YCTT" }, { "name" : "IMGT_allele", "value" : "IGHV3-15*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-15" }, { "name" : "Videntity", "value" : "100,00% (302/302 nt)" }, { "name" : "Source-Sequence", "value" : "M24236" }, { "name" : "Source-Mismatches", "value" : "68" }, { "name" : "Source-Identity", "value" : "77.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.49%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVLLVESGGGLVQPGGSMKLSCAASGFAFSDTWLDWVRQSPEKGPEWVAEIRTKADDHATYYAESVKGRFTISRDDSISSVYLQMNSLRAEDTGIYYCTPHPFDYWGQGATLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3312 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24052:4759 (reversed)", "sequence" : "CGGTGAGGTCCAGCTGCAACAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGGATTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGGGAAACTGGGAGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGTGGG", "circular" 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11155:4857 (reversed)", "sequence" : "GAGCGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGATTGAGGAGGTACTACGGGTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 30, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 36, 38, 36, 38, 31, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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16, 38, 37, 38, 38, 38, 38, 36, 36, 36, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 17, 34, 30, 32, 33, 33, 35, 32, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLRRYYGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARLRRYYGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3446 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9258:4857 (reversed)", "sequence" : "GTGTGAGGTCCAGCTTCAGCAGTCTAGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAGTCCTAGCAACGGTCGTTCTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCGGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGATCGGAGTTACGACGAGGGGGCTATGCTTTGGACTACTGGGGTCTGGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCATTGAGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 29, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 32, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 33, 37, 37, 34, 39, 39, 37, 37, 35, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 37, 39, 39, 36, 39, 39, 39, 39, 39, 38, 38, 14, 38, 38, 37, 39, 38, 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38, 38, 38, 38, 38, 36, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSRAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISPSNGRS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSELRRGGYALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.20%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGFRAAYLDYWGKGTSVSVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "GG" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AY392864" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSRAELVKPGASVKLSCKASGYSFTSYWMHWVKQRPGQGLEWIGEISPSNGRSNYNEKFKSKATLTVDKSSSTAYMQLSGLTSEDSAVYYCTRSELRRGGYALDYWGLGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3447 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11668:4859 (reversed)", "sequence" : "TCTACAGGTTCAGCTGCAGCAATCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTCTTAAGTACAATGAGAAATTCCAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAATAGATTGACATCTGAAGACTCTGCGGTCGATTTCTGTGCAAGACACGAAGATAGGCTACGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTATGCAGCCAAAACAACAGCCCCATCAGTCCATCCACTGTTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 36, 38, 37, 37, 37, 37, 38, 38, 39, 39, 38, 37, 20, 37, 39, 37, 39, 38, 39, 39, 39, 37, 39, 39, 39, 36, 38, 38, 39, 39, 30, 36, 38, 38, 38, 38, 30, 36, 38, 39, 39, 39, 20, 33, 35, 33, 18, 37, 39, 39, 39, 39, 39, 39, 39, 37, 18, 31, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 39, 39, 18, 33, 31, 31, 35, 38, 38, 38, 19, 33, 19, 33, 38, 19, 37, 38, 37, 35, 39, 39, 39, 33, 39, 39, 33, 34, 37, 38, 38, 18, 30, 37, 36, 38, 37, 39, 37, 38, 39, 37, 38, 30, 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32, 16, 37, 32, 16, 16, 34, 16, 37, 37, 37, 34, 16, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFQDKATLTADKSSSTVYMELNRLTSEDSAVDFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSL" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVYA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRLRAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSLKYNEKFQDKATLTADKSSSTVYMELNRLTSEDSAVDFCARHEDRLRAWFAYWGQGTLVTVYA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3449 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6333:4859 (reversed)", "sequence" : "CGGGGATGTGAAGCTTCAGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGACTTGGGTCCGGCAGGCTCATGGGAAAGGACTAGAATGGATTGGAGAAATTAATACAGATAGCAGGACGATAAACTATAAGCCATCTCTAAAGGAGAAATTCATCATGTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCCTATCCCCTGGGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 32, 30, 32, 35, 30, 32, 37, 37, 37, 37, 16, 37, 38, 33, 38, 37, 38, 16, 33, 37, 39, 39, 39, 39, 39, 32, 15, 15, 33, 37, 36, 15, 38, 38, 37, 39, 39, 39, 33, 37, 38, 39, 39, 39, 39, 39, 34, 38, 38, 37, 39, 39, 15, 15, 38, 37, 37, 38, 16, 16, 38, 37, 39, 39, 39, 39, 39, 35, 37, 38, 17, 37, 36, 29, 38, 39, 16, 38, 39, 37, 38, 37, 38, 37, 17, 37, 39, 37, 37, 37, 33, 37, 38, 37, 16, 37, 38, 16, 38, 33, 16, 15, 37, 37, 16, 33, 17, 33, 38, 39, 39, 36, 15, 37, 36, 38, 38, 36, 36, 36, 14, 37, 37, 16, 16, 33, 16, 37, 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38, 38, 38, 33, 33, 33, 33, 33, 32, 35, 32, 18, 18, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAHGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INTDSRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWITY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : "AF174030" }, { "name" : "Source-Mismatches", "value" : "75" }, { "name" : "Source-Identity", "value" : "74.66%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGGGLVQPGGSLKLSCAASGFDFSGYWMTWVRQAHGKGLEWIGEINTDSRTINYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWITYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3451 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17295:4860 (reversed)", "sequence" : "AAACGAGGTGAAGCTGATGGAGTCAGGACCCGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCCGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCCCCGCCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCCTTGCGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 32, 35, 32, 31, 37, 37, 16, 38, 38, 38, 37, 38, 32, 32, 37, 15, 37, 39, 38, 39, 39, 37, 32, 39, 37, 36, 38, 15, 37, 38, 39, 39, 32, 15, 38, 37, 35, 37, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 37, 37, 39, 39, 39, 39, 38, 16, 16, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 32, 38, 39, 16, 38, 39, 37, 39, 39, 34, 38, 39, 39, 39, 39, 38, 39, 39, 38, 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"GGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGTTATTCGTTCACTGGCTACAACATAAACTGGGTGAGGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACTCTGGTGGTACTAGTTATTACCAGAGATTCAAGGACAGGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCCGCAGTCTACTACTGTGCACGATCCCTTTTACGAAGGGATGCTCTGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCACTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 34, 19, 33, 33, 37, 37, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 37, 38, 33, 38, 39, 37, 39, 39, 39, 39, 36, 30, 36, 36, 37, 36, 38, 38, 35, 36, 38, 37, 38, 37, 39, 39, 39, 39, 37, 39, 35, 36, 38, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 36, 39, 39, 39, 37, 38, 37, 38, 37, 39, 39, 39, 31, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 37, 38, 36, 14, 36, 37, 38, 39, 37, 37, 39, 38, 39, 37, 38, 39, 39, 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{ "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"ACCGCAGGTTCAGCTTCAGCAATCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCCTCTGGTTACTCATTCAACGGCTACTACATGCACTGGATGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTTCAATGGTGGTACTGACTACAACCAGAAGTCCAAGGGCAAGGCCACGTTAACTGTAGACAAGTCATCCGTCACAGCCTACATGGAACTCCTCAGTCTGGCATCTGAGGACTCTGGGGTCTAGTACTGTGAAAGAAGAGGCGTCCACTATGGTTACGACGGCTGCTACTTTGACTACTGGGGCCAAGGCACCCCTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCACTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 32, 32, 35, 35, 35, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 39, 39, 39, 39, 39, 34, 32, 39, 34, 38, 37, 39, 39, 39, 32, 38, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 36, 38, 39, 32, 38, 39, 39, 35, 38, 17, 37, 38, 38, 16, 37, 37, 39, 39, 39, 39, 39, 38, 39, 37, 16, 32, 37, 14, 37, 39, 39, 39, 39, 16, 37, 16, 37, 37, 37, 35, 36, 38, 17, 37, 17, 35, 36, 30, 37, 31, 36, 39, 37, 39, 31, 38, 39, 37, 39, 39, 39, 39, 39, 39, 15, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 15, 38, 15, 33, 38, 34, 38, 38, 39, 38, 33, 15, 37, 39, 39, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 33, 38, 39, 39, 17, 35, 37, 39, 39, 39, 37, 35, 14, 31, 35, 38, 39, 39, 38, 37, 32, 36, 39, 38, 38, 27, 37, 16, 37, 39, 24, 27, 24, 38, 37, 38, 39, 39, 39, 39, 39, 16, 38, 33, 38, 37, 37, 14, 38, 38, 38, 38, 36, 36, 27, 32, 34, 31, 25, 26, 34, 26, 23, 25, 34, 15, 26, 38, 37, 39, 38, 37, 25, 20, 38, 34, 33, 37, 38, 33, 3, 14, 27, 30, 33, 33, 36, 38, 38, 38, 38, 38, 37, 38, 35, 33, 34, 34, 15, 13, 16, 16, 16, 29, 13, 15, 27, 16, 16, 16, 28, 16, 27, 30, 16, 35, 37, 37, 16, 37, 30, 14, 14, 14, 14, 14, 16, 16, 16, 31, 17, 17, 16, 29, 27, 39, 35, 37, 31, 31, 16, 16, 29, 16, 16, 33, 14, 15, 29, 14, 14, 37, 36, 15, 17, 38, 37, 33, 16, 16, 35, 36, 38, 38, 36, 29, 14, 36, 14, 29, 15, 16, 33, 16, 17, 31, 16, 39, 39, 37, 33, 38, 17, 33, 38, 39, 38, 36, 38, 36, 37, 39, 38, 36, 16, 38, 37, 30, 14, 36, 32, 14, 14, 37, 35, 35, 39, 39, 37, 38, 16, 37, 34, 32, 37, 36, 32, 15, 38, 39, 39, 36, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 34, 39, 38, 37, 38, 38, 38, 38, 38, 36, 32, 16, 34, 37, 37, 37, 37, 37, 37, 32, 32, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFNGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKSKGKATLTVDKSSVTAYMELLSLASEDSGV*YC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPFNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTPLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ERRGVHYGYDGCYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSYDGFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YSYD" }, { "name" : "IMGT_allele", "value" : "IGHD2-12*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-12" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASMKISCKASGYSFNGYYMHWMKQSHGKNLEWIGLINPFNGGTDYNQKSKGKATLTVDKSSVTAYMELLSLASEDSGV*YCERRGVHYGYDGCYFDYWGQGTPLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3460 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24980:4864 (reversed)", "sequence" : "NAAACAGGTGCAGCTCAAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCATGCGGATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCCATCCCCTGGGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 16, 29, 32, 32, 37, 32, 37, 37, 33, 37, 35, 38, 38, 16, 37, 38, 37, 34, 16, 38, 33, 38, 35, 18, 15, 33, 32, 36, 32, 30, 36, 38, 39, 39, 38, 15, 33, 32, 17, 35, 16, 16, 37, 34, 37, 14, 32, 30, 14, 36, 37, 38, 16, 33, 35, 16, 37, 38, 16, 38, 38, 37, 33, 38, 37, 38, 38, 39, 39, 16, 37, 15, 38, 38, 38, 38, 35, 31, 16, 31, 37, 39, 33, 38, 37, 35, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 15, 30, 38, 39, 39, 39, 37, 39, 39, 33, 37, 38, 34, 38, 38, 38, 36, 37, 35, 38, 37, 39, 37, 37, 32, 34, 36, 37, 39, 32, 34, 38, 38, 38, 38, 36, 37, 36, 38, 38, 37, 37, 33, 34, 37, 37, 37, 39, 38, 39, 35, 35, 37, 39, 39, 38, 38, 39, 37, 39, 39, 39, 37, 14, 37, 27, 38, 38, 34, 34, 34, 32, 38, 37, 38, 37, 38, 14, 38, 38, 39, 37, 33, 33, 35, 33, 38, 39, 28, 14, 14, 31, 12, 34, 34, 36, 37, 37, 38, 33, 38, 39, 38, 38, 36, 13, 38, 36, 34, 24, 25, 34, 24, 28, 33, 37, 37, 39, 39, 36, 25, 38, 28, 28, 26, 33, 37, 38, 33, 37, 37, 37, 39, 38, 37, 34, 37, 37, 36, 38, 38, 36, 37, 37, 37, 34, 37, 37, 24, 38, 38, 16, 38, 35, 31, 16, 32, 38, 37, 39, 37, 39, 39, 38, 35, 35, 33, 38, 37, 16, 33, 33, 38, 37, 29, 27, 15, 34, 27, 34, 36, 30, 37, 39, 36, 39, 39, 39, 38, 37, 38, 15, 29, 16, 37, 36, 29, 17, 33, 37, 33, 17, 33, 38, 34, 36, 38, 37, 14, 39, 37, 39, 39, 36, 34, 38, 36, 30, 38, 38, 39, 38, 36, 35, 35, 37, 33, 16, 33, 33, 14, 14, 14, 33, 37, 36, 34, 33, 16, 33, 36, 38, 33, 39, 38, 39, 37, 16, 35, 16, 38, 37, 37, 37, 38, 38, 14, 38, 38, 33, 34, 32, 37, 35, 17, 16, 38, 32, 38, 37, 37, 37, 38, 30, 36, 36, 15, 32, 16, 16, 18, 16, 37, 16, 37, 33, 34, 37, 29, 29, 32, 16, 16, 16, 32, 32, 32, 32, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDHADGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDHADGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3462 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21873:4864 (reversed)", "sequence" : 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"[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21028:4866 (reversed)", "sequence" : "ATTACAGGTCCACGTGAAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCTTCACTAACTACTGGATAGGCTGGGTAGCGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTAATTGTGGAGGTGGTTATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCTCATCCACTGACTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 18, 37, 37, 39, 38, 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QVHVKQSGAELVRPGTSVKMSCKAA" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWVAQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INCGGGYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 311, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"EVQLQQSGAALVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCANYYYGSHFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3388 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20594:4814 (reversed)", "sequence" : "GGGCGAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGCTATGGTAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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: "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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39, 39, 38, 39, 39, 39, 39, 39, 36, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 38, 38, 39, 39, 38, 37, 38, 38, 36, 33, 36, 37, 36, 36, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 37, 34, 34, 34, 34, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", 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"value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMDPGDVWGQGTTVTVSS" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062276" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARDTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3390 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6965:4817 (reversed)", "sequence" : "AGCTCAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATGGTTACTACGAGAGGGTTTGGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCTCATCCCTTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 37, 37, 33, 19, 33, 38, 38, 38, 38, 38, 34, 38, 34, 38, 37, 38, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 38, 36, 32, 38, 33, 38, 20, 38, 38, 35, 32, 37, 35, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 32, 37, 37, 35, 39, 39, 39, 39, 39, 39, 39, 36, 39, 38, 39, 38, 36, 38, 39, 39, 38, 39, 39, 38, 39, 39, 38, 34, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 34, 37, 34, 37, 33, 33, 37, 37, 37, 34, 32, 29, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWLLREGLAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARWLLREGLAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3391 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13920:4818 (reversed)", "sequence" : "CCTAGAGGTTCAGCTCCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTATATGTACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAATGGTGGTACTAACTTCAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACCTTATGGTGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCACTGATTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 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39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 36, 36, 38, 36, 36, 37, 37, 34, 37, 38, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TLWCYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKASGYTFTSYYMYWVKQRPGQGLEWIGEINPSNGGTNFNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTLWCYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3392 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7484:4819 (reversed)", "sequence" : "TTTAGCTCCTAGACCTTTAGCAGCAAGGTCCATATCTGACTTTTTGTTAACGTATTTAGCCACATAGAAACCAACAGCCATATAACTGGTAGCTTTAAGCGGCTCACCTTTAGCATCAACAGGCCACAACCAACCAGAACGTGAAAAAGCGTCCTGCGTGTAGCGAACTGCGATGGGCATACTGTAACCATAAGGCCACGTATTTTGCAAGCTATTTAACTGGCGGCGATTGCGTACCCGACGACCAAAATTAGGGTCAACGCTACCTGTAGGAAGTGTCCGCATAAAGTGCACCGCATGGAAATGAAGACGGCCATTAGCTGTACCATACTCAGGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 37, 36, 38, 38, 38, 38, 38, 38, 20, 33, 37, 37, 33, 37, 37, 39, 38, 38, 39, 36, 37, 39, 37, 39, 39, 33, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 33, 33, 37, 38, 39, 38, 20, 38, 39, 39, 39, 39, 39, 38, 36, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 34, 37, 37, 37, 39, 39, 39, 39, 37, 37, 37, 31, 38, 38, 39, 39, 37, 37, 39, 39, 38, 38, 39, 38, 39, 37, 36, 37, 37, 39, 38, 38, 37, 37, 37, 37, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 39, 39, 38, 39, 36, 38, 38, 39, 39, 39, 39, 38, 38, 36, 38, 38, 37, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 38, 36, 36, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 34, 38, 38, 38, 39, 37, 36, 39, 39, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 37, 36, 38, 37, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 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"AGGTGAGGTGCAGCTTCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAAAGTATGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCCATCCCCTGCGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 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33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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32, 37, 33, 32, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSQILSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LHWIRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "DYNAAFISRLIITKDNSKNQVFFKMNSLQTDDTAIYYR" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRKGYTGYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVKPSQILSITCTVSGFSLTTYGLHWIRQSPGKGLEWLGVIWSGGSTDYNAAFISRLIITKDNSKNQVFFKMNSLQTDDTAIYYRVRKGYTGYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3524 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20299:4897 (reversed)", "sequence" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVGPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDYDWVPDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3536 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23469:4910 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37, 37, 38, 34, 38, 38, 38, 37, 37, 34, 33, 33, 35, 33, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCEAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCEASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARYATATYWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3537 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18935:4912 (reversed)", "sequence" : "CTGTGAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTCCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCACTGCCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKSQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKSQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3538 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20167:4913 (reversed)", "sequence" : "GCTGGAGGTGCAGCTGGTGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCATTGACAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 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38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPDLVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3539 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16870:4914 (reversed)", "sequence" : "TTGTCAGGTTCAGCTCCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCAGGCTATACCTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTGATCCTTCCAATAGTGAAAGTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGAATGTAGACAAATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGGAACCACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGTCCATCCCTTGTCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 37, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 39, 24, 35, 23, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 16, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 37, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 37, 37, 39, 39, 39, 39, 37, 39, 38, 38, 39, 38, 39, 39, 38, 38, 39, 36, 38, 37, 38, 37, 36, 34, 38, 39, 37, 39, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 37, 38, 38, 37, 34, 37, 38, 38, 36, 37, 33, 33, 33, 37, 33, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFKDKATLNVDKSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPSNSES" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WEPLNWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WEP" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "X80305" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIDPSNSESRLNQKFKDKATLNVDKSSNTAYMQLSSLTSEDSAVYYCARNHYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3540 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8582:4915 (reversed)", "sequence" : "CGATCAGGTCCAGCTTCAGCAGTCTGACGCTGAGTTGGTGAAACCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGACGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTAAAAGATCTGATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCCTTGCTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 33, 32, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 37, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 36, 37, 39, 39, 38, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 37, 32, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 37, 39, 39, 35, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 15, 29, 36, 36, 39, 39, 37, 38, 38, 39, 38, 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"GGGTGAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGAGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATGTGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCGAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCACCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAATGCATGGGGGGACGACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCACCCTTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 32, 32, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 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38, 38, 37, 38, 36, 36, 32, 37, 33, 33, 33, 33, 33, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYAPKFQGEATMTADTSSNTAYLHLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPENGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NAWGDDDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.52%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, 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"AGTAGAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTCACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCCCTGCAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 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38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRNKANGHTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGHTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3486 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11597:4875 (reversed)", "sequence" : "CCTCGAGGTGCAACTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTCATCCCTTGAGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 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"value" : "QVQLQQSGPELVRPGSSVKMSCKASGYTFSSYWMHWVKQRPGQGLEWIGMTDPSNSETRLNQKFMDKATLNVDKSSNTAYMQLSSLTSEDSAVYYCAKNHFAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3492 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6536:4879 (reversed)", "sequence" : "GCTTGAGGTGAACGTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCATGGTGGTGGTACCACCTACTATTCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATTTATTACTGTACAAGACATGGTGGTTACTACCCTTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 36, 37, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 37, 38, 37, 38, 37, 37, 37, 36, 39, 37, 39, 37, 39, 39, 39, 39, 38, 39, 37, 36, 38, 38, 16, 39, 37, 36, 32, 32, 38, 36, 18, 37, 32, 37, 38, 39, 38, 34, 32, 39, 39, 38, 34, 39, 37, 38, 36, 36, 38, 38, 39, 38, 38, 37, 19, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 29, 32, 32, 33, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISHGGGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRHGGYYPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "21" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3493 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11459:4881 (reversed)", "sequence" : "CCAGGATGTGCACCTGGTGGAGTCAGGACCTGACCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAAACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCAGACACGATAATGATGGTTACTACCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCTCATCCCTTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 32, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 33, 32, 32, 38, 38, 39, 39, 37, 35, 34, 34, 38, 39, 37, 37, 33, 38, 33, 37, 39, 36, 39, 33, 36, 39, 36, 38, 38, 36, 36, 36, 38, 39, 37, 38, 37, 32, 18, 38, 39, 37, 38, 39, 39, 37, 38, 39, 38, 39, 39, 35, 38, 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16, 38, 33, 16, 33, 32, 14, 29, 14, 37, 15, 33, 15, 33, 31, 31, 33, 36, 16, 39, 38, 34, 37, 33, 16, 37, 16, 37, 15, 15, 15, 15, 14, 35, 37, 33, 14, 14, 16, 33, 14, 37, 39, 38, 34, 38, 32, 36, 36, 36, 36, 30, 38, 39, 38, 38, 38, 38, 38, 38, 37, 16, 16, 16, 37, 32, 32, 32, 35, 30, 35, 32, 16, 16, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGPDLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLVV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHDNDGYYLAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 2, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGPDLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLVVIWSDGSTNYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARHDNDGYYLAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3494 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13968:4881 (reversed)", "sequence" : "AGTGCAGGTTCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAATGCCCGTGGGGATTACGACTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCCATCCCCTGGTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNENSKGKATLTADKASSTAYMQLSSLTSEDSAVYFCAREGHGNYGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3500 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18684:4883 (reversed)", "sequence" : "CGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGAATGGTAACAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCTTATCCCTTGCACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLNGNNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGTSYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYCARQLNGNNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3501 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11152:4884 (reversed)", "sequence" : "TAATCAGGTTCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTACCTATTACTACGGTAGTAGCTGGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCTATCCACTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 17, 36, 36, 38, 39, 39, 39, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATYYYGSSWGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATYYYGSSWGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3502 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15361:4884 (reversed)", "sequence" : "CGCGGAGGTACAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCCGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 323, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TGQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIVYIYPHNGGNGYNQKFKNKATLTVDSSSSTAYMELRSLTSEDSAVYYCARSRGTTATTYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3505 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9017:4885 (reversed)", "sequence" : "TAAGGAGGTGCAACTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCATTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 32, 32, 33, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 38, 37, 38, 39, 39, 33, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGLFTISRDNAKNTLYLQMSSLKSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASLYYRYDREDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGLFTISRDNAKNTLYLQMSSLKSEDTAIYYCASLYYRYDREDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3517 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20619:4893 (reversed)", "sequence" : "CTGACAGGTTCAGCTGCAGCAATCAGGACCTGACCTGGTGAAGCCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTTATTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATACACTACAGTGGTACCACTGTCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAATAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATTCGCTGGGACCCCCTATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCCTTGTCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 38, 39, 19, 32, 33, 33, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 18, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 33, 20, 35, 37, 38, 38, 38, 38, 37, 39, 39, 37, 39, 37, 39, 37, 39, 39, 37, 37, 34, 33, 38, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 37, 34, 38, 18, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 31, 30, 33, 37, 39, 35, 35, 39, 37, 37, 36, 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"0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSYYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TCGCGAGGTGCAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCAACTCTCAAATCCAGACTGAGCATCAGCAAGGACAGCTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACATGATACTACGGTTGTAGTCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCACTGCACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 36, 39, 39, 39, 39, 38, 38, 36, 38, 39, 38, 37, 39, 39, 39, 38, 38, 37, 39, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 36, 39, 39, 39, 38, 39, 39, 39, 39, 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37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSTLKSRLSISKDSSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, 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37, 38, 38, 37, 34, 37, 38, 37, 37, 37, 37, 32, 33, 33, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"sequence" : "AACGGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGAACTACGGCTACTCTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTTATCCATTGTTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 33, 34, 34, 32, 32, 37, 37, 38, 38, 38, 38, 38, 37, 37, 37, 34, 38, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 37, 39, 37, 39, 39, 39, 38, 38, 38, 38, 36, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 37, 38, 34, 37, 38, 38, 39, 39, 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35, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 36, 37, 38, 35, 38, 37, 38, 38, 37, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 35, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 186, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 185, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 345, "max" : 377, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"ACTAGAGGTGCAACTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGGTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTAACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACACCAGAGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGATCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 36, 34, 38, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 31, 38, 33, 31, 16, 18, 19, 33, 38, 39, 39, 39, 34, 14, 14, 14, 27, 36, 14, 14, 15, 14, 33, 38, 37, 17, 37, 38, 38, 39, 37, 37, 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33, 32, 33, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWGRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% 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"value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDFYMFWFRQTPEKRLEWVATISDGGTYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAIYYCARSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3414 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10292:4836 (reversed)", "sequence" : "GACTCAGGTCCAGCTTCAGCAGTCTGGGGCTGAGCTAGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAATATTTATCCTTCTGATACTTATACTAACTACAATCAAGAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAAAGAATGATTACTACGGTATTAGCTCCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCATTGTGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQEFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPSDTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRKNDYYGISSFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "32" }, { "name" : "Source-Identity", "value" : "89.12%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", 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"IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" 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"TCTGCAGGTCCAACTGCAGCAGCCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTGCAAGGGAGGGTAGTAGGCTACGAGGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTCATCCCCTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 35, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 38, 36, 34, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 34, 38, 37, 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36, 36, 36, 37, 38, 37, 36, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVKQRPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTIDTSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IFPGTGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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{ "sequence" : { "name" : "ERR346596.3436 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7634:4850 (reversed)", "sequence" : "CTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 33, 35, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 37, 38, 38, 37, 32, 33, 33, 37, 37, 38, 38, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 37, 38, 39, 36, 39, 39, 38, 38, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 190, "direction" : "Left", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "1" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 138, "max" : 152, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.3438 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8868:4852 (reversed)", "sequence" : 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNQKFKDKAILTVDKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, 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36, 36, 37, 38, 37, 16, 38, 32, 32, 35, 35, 34, 16, 37, 32, 29, 16, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"EVQLQQSGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGTTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARRNGNYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3572 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9212:4932 (reversed)", "sequence" : "GTCGGAGGTGCAACTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCTGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTATCTGCAAATGAGTAGTCTAAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGTCTATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 37, 37, 38, 37, 38, 38, 38, 35, 38, 38, 36, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 39, 39, 39, 37, 37, 38, 39, 35, 33, 37, 38, 39, 39, 39, 39, 39, 39, 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: "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKVRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3576 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20516:4933 (reversed)", "sequence" : "GTGGCAGGGGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTTCACTGTCTCTGGGGTTTTATTAACCAGCTATGGTGTACACTGGGGTCGCCCGCCTCCAGGGAAGGGGCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCTATCCCCTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 16, 29, 16, 16, 16, 15, 15, 33, 16, 33, 16, 32, 15, 15, 15, 33, 32, 16, 33, 16, 32, 33, 15, 15, 38, 15, 33, 16, 14, 32, 16, 33, 32, 15, 14, 14, 32, 32, 14, 32, 32, 32, 16, 16, 32, 15, 15, 33, 15, 15, 33, 16, 37, 17, 17, 16, 37, 16, 16, 35, 16, 16, 17, 17, 17, 16, 35, 16, 33, 17, 17, 16, 33, 38, 14, 30, 36, 36, 14, 17, 16, 37, 17, 31, 16, 33, 16, 14, 14, 16, 16, 29, 16, 16, 17, 33, 30, 16, 33, 33, 16, 16, 36, 38, 39, 14, 30, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 32, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QGQLKESGPGLVAPSQSLSITFTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWGRPPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "GVLLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QGQLKESGPGLVAPSQSLSITFTVSGVLLTSYGVHWGRPPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3577 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17231:4933 (reversed)", "sequence" : "TATAGATGTGAAGCTTCAGGAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCTTGGTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 36, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 37, 37, 39, 38, 38, 39, 39, 37, 39, 37, 38, 38, 38, 39, 36, 39, 38, 39, 37, 37, 39, 38, 34, 38, 39, 39, 39, 38, 39, 38, 36, 36, 32, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 37, 33, 34, 34, 37, 34, 34, 33, 33, 34, 34, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" 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"name" : "ERR346596.3595 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23148:4944 (reversed)", "sequence" : "TAAACAGGTCCAACTACAGCAACCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTACTACTGTGCAAGATCTAAAGGGGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCCTGATTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 16, 37, 37, 32, 37, 37, 37, 37, 33, 38, 38, 38, 34, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 38, 38, 38, 38, 37, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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36, 36, 16, 14, 32, 15, 38, 39, 39, 30, 37, 39, 39, 39, 38, 36, 38, 38, 36, 36, 36, 34, 37, 34, 37, 38, 38, 38, 37, 37, 37, 34, 38, 32, 32, 31, 37, 37, 35, 35, 30, 32, 32, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSKGGNYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"TNNNNNNNNNCAGCTGAANGANNNTNNGNGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGATCTCATTACTACGGCTACGTCATTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCCCGGCTTATCCACTGGTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 2, 2, 2, 2, 2, 2, 2, 2, 2, 29, 29, 32, 37, 37, 36, 38, 38, 2, 32, 32, 2, 2, 2, 33, 2, 2, 33, 2, 33, 32, 37, 37, 34, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 36, 39, 36, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 34, 38, 37, 36, 37, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 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38, 38, 37, 37, 37, 37, 37, 37, 33, 33, 32, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "XXQLXXXXXGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDLITTATSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "XXQLXXXXXGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGNYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARDLITTATSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3598 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8120:4946 (reversed)", "sequence" : "ACAAGAAGTGAAGCTTGAGGAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTGCCTGGAAGTGGTAGTACTCACTACCATGAGAAGTTCAAGGACACGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACCCTGCCGTCTATTACTGTGCAAGAGGGGGGTATGATACCTCCATTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGCTCATCCCTTGGAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 16, 38, 38, 38, 38, 38, 38, 38, 38, 32, 33, 38, 38, 39, 39, 16, 38, 39, 39, 39, 39, 38, 39, 39, 39, 35, 38, 39, 39, 39, 34, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 31, 16, 38, 38, 39, 38, 39, 38, 32, 38, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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37, 37, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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39, 37, 38, 38, 38, 38, 38, 38, 38, 34, 34, 37, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVMGRFTISRDNAKNTLYLQMTSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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(2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAHISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRHGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3549 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22043:4919 (reversed)", "sequence" : "TATTCAGGTTCAGCTCCAGCAATCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACGTGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAGCCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTTTATCCCTTGGAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 37, 39, 38, 38, 37, 39, 37, 38, 38, 39, 39, 37, 38, 38, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 37, 37, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 38, 39, 38, 38, 38, 37, 38, 38, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 39, 38, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 37, 38, 39, 39, 39, 37, 39, 39, 38, 36, 37, 39, 39, 39, 37, 38, 38, 36, 38, 38, 37, 32, 36, 33, 16, 37, 34, 35, 39, 39, 38, 34, 38, 38, 37, 37, 38, 39, 37, 36, 36, 37, 36, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYVQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGASVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYVQLSSLTSDDSAVYFCARAITDAMDYWGQGASVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3550 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21250:4919 (reversed)", "sequence" : "GCGGGAGGTGCAGGGGGTGGAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATGGGATTACGAGGGGTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCTTATCCCCTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 32, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 38, 37, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 36, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 36, 39, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 38, 37, 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38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGWDYEGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 284, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGAELARPGASVKMSCKASGYSFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARGWDYEGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3551 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19152:4920 (reversed)", "sequence" : "GCCGCAGGTTACTCTGAAAGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAATGGATTGGACGGATTTATCCTGGAGATGGAAATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGTCTCTGCGGTCTATTTCTGTGCCCTCTATGATACGACGGACTCTCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCTATCCACTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 35, 38, 38, 39, 39, 39, 39, 39, 38, 34, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 36, 36, 36, 31, 38, 19, 33, 31, 33, 38, 19, 38, 38, 39, 18, 37, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 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"CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVANPSTTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 319, "max" : 351, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGNWDFAD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 4, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 351, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "90.38%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 4, "max" : 351, "direction" : "Right", 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"TTTCGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTCATGGTGGTGGTACCACCTACTATTCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATTTATTACTGTACAAGACTTGGTGGTTACTACCCTTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTTTCCTCAGCCAAAACAACACCCCCATCTGCTTATCCCTTGCTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 37, 33, 33, 32, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 37, 36, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 32, 37, 36, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 16, 30, 36, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 38, 38, 38, 36, 34, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRLGGYYPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.54%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISHGGGTTYYSDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAIYYCTRLGGYYPYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3686 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7983:5007 (reversed)", "sequence" : "GGTTGACGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCGGTCCATCCCTTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 33, 33, 33, 32, 37, 38, 38, 38, 38, 38, 19, 37, 38, 38, 34, 38, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 38, 39, 36, 39, 38, 37, 37, 38, 35, 38, 38, 37, 39, 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38, 38, 37, 37, 32, 33, 37, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3687 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22481:5007 (reversed)", "sequence" : "ATAACAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAAGAGGTTTTATTACTACGGTAGTAGAGGGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCCCATCCACTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 30, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 37, 37, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 37, 36, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 26, 39, 38, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 33, 37, 39, 38, 33, 36, 39, 39, 37, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 36, 39, 38, 37, 39, 39, 38, 39, 39, 38, 38, 39, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 37, 39, 39, 36, 38, 35, 37, 38, 36, 38, 38, 39, 39, 39, 39, 38, 34, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 37, 39, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSNGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGFITTVVEGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELEKPGASVKISCKASGYSFTGYNMNWVKQSNGKSLEWIGNIDPYYGGTSYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARRGFITTVVEGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3688 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8909:5008 (reversed)", "sequence" : "GGAGGAGGTGCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCATTGGAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 29, 32, 33, 33, 32, 33, 33, 32, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 36, 38, 39, 39, 38, 39, 38, 34, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVEKSSSTAYMELRSLTSEDSAVYYCARWKDGYYSWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3698 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9777:5013 (reversed)", "sequence" : "GTGGGAGGTCCAGCTGCAGCAGTCTGGGGCTGACCTTGTGAAGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGCTACAACTTCAGCAACTACTGGATAAACTGGGTGAGGCTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTGGTTCTCACTACAATGACAAATTCAAGAACAAGGCCACACTAACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGTCTGGCATCTGAGGACTCTGCTCTCTATTACTGTGCAAGAGATGGGAACTGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCGCTGTCTCTGCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 33, 33, 33, 35, 33, 37, 37, 37, 38, 38, 38, 38, 38, 34, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 38, 36, 32, 36, 38, 37, 39, 39, 37, 37, 37, 39, 39, 39, 39, 37, 37, 35, 20, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 35, 37, 37, 37, 33, 33, 33, 31, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGADLVKPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVRLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNFSNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNDKFKNKATLTVDTSSSTAYMQLSSLASEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGSGGS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVAVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP 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: "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RDG" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { "name" : "Source-Sequence", "value" : "AF052381" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGADLVKPGTSVKVSCKASGYNFSNYWINWVRLRPGQGLEWIGDIYPGSGGSHYNDKFKNKATLTVDTSSSTAYMQLSSLASEDSALYYCARDGNWPFAYWGQGTLVAVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3699 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17311:5014 (reversed)", "sequence" : "GTTCGAGGTGCAGCTGGTGGAGTCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAAGTGGTGGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCCGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGCGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 33, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 37, 38, 37, 38, 38, 37, 38, 36, 34, 37, 33, 33, 33, 33, 33, 33, 32, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAEVVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTPVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVLGRPF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTPVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3700 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : 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"translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ATYYYGSSWGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, 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"sequence" : { "name" : "ERR346596.3709 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24161:5024 (reversed)", "sequence" : "ATAAGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAACTGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGGCCCCCATGATGATGATATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCCTGCTAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 32, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 34, 36, 36, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 37, 38, 36, 39, 36, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 35, 37, 39, 37, 37, 17, 33, 38, 39, 39, 39, 39, 38, 39, 37, 37, 39, 39, 39, 37, 37, 39, 39, 39, 36, 39, 39, 37, 39, 39, 39, 39, 39, 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39, 37, 38, 39, 39, 36, 32, 38, 38, 38, 37, 36, 39, 38, 37, 38, 37, 38, 38, 36, 34, 38, 38, 38, 38, 38, 38, 38, 38, 33, 32, 33, 35, 32, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQLSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGPHDDDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQLSSLKSEDTAMYYCARGPHDDDMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3710 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18715:5025 (reversed)", "sequence" : "GCACCAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTCCTATTTACACTGGGTGAAGCAGAGGCCTGAGCAGGGCCTGGACTGGATTGGAAGGATTGATCCTGCGAAAGGTAATACTAACTATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTTCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTTCTGTGCTAGAAACTACCCTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCTCATCCCCTGCGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 37, 38, 39, 39, 38, 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"[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : 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"QVQLKESGSELVKPGASVKLSCAASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTRPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3663 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18725:4989 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGCGAAGCAAAGCCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGCAACTACCTACAACCAGAATTTCAAGGACAAGGCCAGCTTGACTGTAGATAAGTCCTCCAGCACAGCCTACCTGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCTTGGGATTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCACTGGGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 32, 32, 35, 32, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 34, 16, 33, 36, 38, 39, 39, 39, 39, 33, 15, 32, 15, 37, 15, 38, 15, 37, 37, 38, 38, 39, 38, 39, 37, 39, 39, 39, 37, 39, 36, 38, 32, 30, 38, 37, 33, 16, 36, 39, 39, 39, 37, 39, 38, 32, 37, 38, 39, 39, 39, 33, 37, 38, 16, 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38, 38, 37, 38, 33, 36, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 38, 39, 39, 36, 34, 39, 39, 39, 39, 39, 38, 38, 38, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 33, 38, 38, 37, 37, 37, 37, 34, 30, 37, 32, 32, 29, 18, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWAKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ 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}, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.68%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPDLVKPGASVKISCKASGYSFTGYYMHWAKQSHVKSLEWIGRINPYNGATTYNQNFKDKASLTVDKSSSTAYLELHSLTSEDSAVYYCARSWDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3664 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11264:4990 (reversed)", "sequence" : "GTCGGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCTCATCCACTGGTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 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38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "25" }, { "name" : "Source-Identity", "value" : "91.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKSLEWIGLINPYNGGTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARDYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3665 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10585:4991 (reversed)", "sequence" : "CCAAGAAGTGAAGCTTGAGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGCCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTTTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCGGAAGGCTGAGGACACAGCCATGTACTACTGTGCAAGCCCCCATTACTACAATAGTAGCCCCTGGTGGTACTTCGATGTCTGGGGCGCTGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGAGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 29, 32, 32, 37, 37, 37, 37, 37, 33, 37, 33, 38, 38, 38, 38, 32, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 32, 39, 39, 39, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 37, 35, 35, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 33, 37, 36, 38, 39, 39, 39, 19, 37, 38, 39, 39, 39, 36, 37, 15, 14, 27, 36, 38, 38, 39, 37, 39, 39, 39, 33, 39, 16, 34, 38, 39, 15, 33, 38, 15, 33, 37, 37, 38, 39, 39, 39, 39, 38, 34, 36, 37, 38, 30, 35, 35, 34, 38, 38, 39, 39, 39, 16, 35, 35, 16, 38, 38, 35, 37, 32, 13, 34, 27, 38, 39, 33, 31, 33, 38, 39, 39, 33, 39, 39, 39, 33, 35, 34, 38, 33, 38, 37, 37, 39, 38, 38, 34, 38, 37, 34, 38, 38, 39, 37, 34, 30, 30, 33, 33, 36, 34, 37, 38, 37, 26, 34, 2, 19, 37, 37, 37, 26, 24, 32, 37, 38, 37, 37, 34, 24, 33, 37, 37, 26, 33, 24, 33, 13, 24, 24, 24, 34, 32, 33, 37, 37, 37, 33, 33, 37, 37, 37, 37, 26, 15, 34, 25, 14, 34, 25, 12, 13, 27, 27, 27, 27, 14, 27, 14, 34, 15, 15, 35, 35, 29, 16, 27, 15, 36, 39, 34, 34, 35, 29, 16, 16, 27, 28, 16, 28, 27, 15, 16, 16, 30, 14, 31, 30, 14, 14, 14, 14, 30, 16, 29, 17, 37, 17, 37, 33, 17, 17, 38, 29, 37, 33, 16, 15, 32, 31, 29, 14, 14, 37, 15, 14, 36, 37, 33, 16, 38, 29, 29, 29, 29, 37, 14, 38, 37, 36, 37, 32, 38, 38, 36, 36, 38, 38, 36, 37, 39, 36, 39, 38, 33, 38, 30, 38, 36, 29, 16, 16, 38, 37, 38, 37, 36, 38, 38, 38, 37, 34, 37, 37, 38, 39, 39, 36, 38, 39, 39, 39, 39, 39, 38, 38, 36, 36, 15, 38, 39, 38, 38, 38, 38, 38, 37, 38, 33, 16, 16, 32, 32, 35, 37, 16, 37, 37, 32, 32, 32, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKSLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSLKGRFTISRDNAKNTLYLQMSSRKAEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASPHYYNSSPWWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGDLVKPGGSLKLSCAASGFTFSNYGMSWVRQTPDKSLEWVATISSGGSYTYYPDSLKGRFTISRDNAKNTLYLQMSSRKAEDTAMYYCASPHYYNSSPWWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3666 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6936:4991 (reversed)", "sequence" : "ATAAGAGGTCCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTTATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTGCAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCTCATCCACTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 39, 39, 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35, 37, 37, 37, 37, 37, 32, 32, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTASGFNIKDYYMHWVKQRPELGLEWIGWIYPENGDIVIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYCNRGMVTTNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3668 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18625:4993 (reversed)", "sequence" : "GTGACAGGTCCAGCTCCAGCAATCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTAGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAACCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTTCATCCCTTGCACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 31, 38, 39, 39, 39, 39, 39, 39, 38, 37, 33, 37, 37, 38, 37, 38, 38, 39, 18, 37, 38, 38, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 36, 38, 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"type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { 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"sequence" : { "name" : "ERR346596.3673 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12322:4997 (reversed)", "sequence" : "CGGGGAGGTCCAACTGCAACAGTCTGCAGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGTAAGGCTTCTGGCTACACCTTTACTAGCCTCACGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTACAATGGATTGGATACATTGTTCCTAGCAGTGGATATACTGAGTATAATCAGATGTTCAAGGACAAGACCACATAGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGTGCAAGAGAGAGCAGTTCGGGCGCCTGGTTTACTCACTGGGGCCAAGGGACTCTACTCACTATCTCTGCAGCTACAACAACAGCCCCATCGGCTTATCCATTGCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 37, 38, 38, 38, 37, 38, 37, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 32, 34, 34, 36, 38, 38, 38, 38, 37, 38, 38, 33, 37, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 38, 39, 37, 39, 39, 38, 33, 39, 39, 39, 36, 38, 39, 37, 39, 39, 39, 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38, 38, 37, 36, 38, 39, 38, 32, 38, 20, 39, 39, 38, 37, 39, 39, 39, 38, 36, 36, 38, 38, 38, 38, 38, 38, 36, 36, 34, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSAAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MQWVKQRPGQGLQWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSLT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQMFKDKTT*TVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IVPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "WGQGTLLTISA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARESSSGAWFTH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSAAELARPGASVKMSCKASGYTFTSLTMQWVKQRPGQGLQWIGYIVPSSGYTEYNQMFKDKTT*TVDKSSSTAYMQLSSLTSEDSAVYYCARESSSGAWFTHWGQGTLLTISA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3674 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23135:4999 (reversed)", "sequence" : "TAGCGATGTAAAGCTTCAGGAGTCAGGACCTGGTCTGGTGAAACCTTCTCAGACAGTGCCCCTCACCTGCACTGTCACTGGCATCTCCATCACCACTGGAAATTACAGATGGAGCTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATAGGGTGCATATACTACAGTGGTACCATTACCTACAATCCATCTCTCACAAGTCGAACCACCATCACTAGAGACACTTCCAAGAACCAATTCTTCCTGGAAATGAACTCTTTGACTGCTGAAGACACAGCCACATACTACTGTGCACGTGATGGCTGGGACGTCCGCTACTTTGACTACTGGGGCTAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGTTCATCCCTTGGTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 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38, 36, 38, 38, 38, 38, 38, 37, 32, 33, 33, 37, 33, 32, 32, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPGLVKPSQTVPLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 110, "max" : 160, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WSWIRQFPGNKLEWIGC" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 109, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GISITTGNYR" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 182, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNPSLTSRTTITRDTSKNQFFLEMNSLTAEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 161, "max" : 181, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYYSGTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WG*GTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 296, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGWDVRYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : 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"translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPGLVKPSQTVPLTCTVTGISITTGNYRWSWIRQFPGNKLEWIGCIYYSGTITYNPSLTSRTTITRDTSKNQFFLEMNSLTAEDTATYYCARDGWDVRYFDYWG*GTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3675 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13959:4999 (reversed)", "sequence" : "TACTGACGTGATGTTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTAAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTACTAACACCTATTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCCGAGACAATGCCAAGAACACCCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTACAAGACGGGGAATTTACGACGAGAGGACTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCTTATCCCTTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 37, 37, 34, 34, 34, 34, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 38, 36, 37, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 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39, 36, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 33, 33, 33, 33, 37, 37, 33, 33, 33, 32, 31 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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37, 31, 37, 33, 32, 32, 18, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3815 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16334:5099 (reversed)", "sequence" : "CTACCAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGCTATGGTAACGCTTGCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCAGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 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33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSYGNAC" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFTDYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYCGSYGNACWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3817 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13285:5102 (reversed)", "sequence" : "GGGCGAGGTGAAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCCCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCCCTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPGLVAPPQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"CGGAGACGTGAAGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAAAAACTATGGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCACTGAACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 32, 35, 32, 32, 32, 32, 32, 32, 38, 38, 38, 38, 34, 16, 32, 15, 37, 38, 39, 39, 39, 39, 39, 34, 39, 36, 36, 38, 34, 36, 36, 38, 38, 38, 39, 34, 37, 37, 39, 39, 39, 39, 39, 38, 38, 38, 36, 32, 37, 39, 39, 35, 38, 37, 39, 37, 37, 37, 39, 38, 39, 39, 39, 39, 39, 16, 31, 37, 37, 16, 37, 37, 39, 39, 39, 38, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 34, 30, 38, 36, 38, 38, 36, 39, 39, 39, 15, 38, 37, 38, 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38, 38, 38, 36, 36, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 38, 37, 37, 37, 37, 18, 37, 37, 32, 32, 29, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3626 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23201:4966 (reversed)", "sequence" : "ATACGAGGTCCAGCTGCAGCAGTCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCCTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAAGTGGTGGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCACAGTTCATCCACTGGAAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 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"name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVLGRPF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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"GAATGAGGTGAACGTGGTGGAATCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGTACGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 37, 34, 36, 38, 39, 37, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 36, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 18, 36, 36, 39, 38, 39, 37, 38, 38, 39, 38, 38, 37, 38, 38, 39, 38, 38, 39, 39, 39, 38, 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"EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : 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38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELMKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWMKERPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "GFTFTSYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSTTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRFITTTHWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELMKPGASVRISCKASGFTFTSYFIHWMKERPGQGLEWIGWIYPGNVNTNYNEKFKGKATLTADKSSTTAYMQLSSLTSEDSAVYFCARRFITTTHWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3640 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(reversed)", "sequence" : "CAGAGAGGTCCAGCTGCAACAATCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACGATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGAGGGACCAACTGGGACGGGGGGTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCACTGCTTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 39, 37, 38, 37, 39, 39, 39, 38, 38, 39, 38, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 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38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TREGPTGTGGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGRLG" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GRLG" }, { "name" : "IMGT_allele", "value" : "IGHD3-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-1" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTREGPTGTGGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3727 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9562:5031 (reversed)", "sequence" : "ATGTCAGGTTCAACTGCAGCAGTCTGGGTCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCGCAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGGAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGACAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAGACCCTCTTTTTACTACGGTAGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGTTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 30, 36, 32, 36, 36, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 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39, 39, 39, 34, 39, 38, 38, 39, 38, 38, 38, 38, 37, 36, 36, 39, 36, 18, 36, 16, 32, 37, 39, 38, 32, 16, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 37, 38, 38, 38, 38, 32, 31, 33, 33, 33, 37, 37, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVKPGASVKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVEQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVKPGASVKLSCAASGFNIKDTYMHWVEQRPEQGLEWIGRIDPANGDTKYDPKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYCTRPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3728 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15627:5032 (reversed)", "sequence" : "AGCCCAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGACTACAATCAGAAGTTCAAGGACAAGGCCACATTGTCTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGACGGCTTAACTGGGACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTCTATCCCCTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 31, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 39, 39, 37, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 37, 37, 38, 33, 38, 39, 38, 37, 37, 38, 39, 38, 34, 37, 37, 38, 38, 39, 37, 37, 37, 38, 38, 36, 34, 38, 37, 36, 36, 36, 34, 35, 36, 38, 38, 38, 37, 38, 37, 35, 34, 38, 38, 33, 33, 33, 33, 37, 37, 37, 32, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKFKDKATLSADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRLNWDWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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: "ERR346596.3729 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17076:5033 (reversed)", "sequence" : "CGAGGAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAAGGAGGGGTAACTGGGAGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCATTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 34, 34, 34, 33, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 37, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 35, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 34, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 37, 38, 39, 38, 38, 34, 33, 39, 38, 38, 37, 17, 39, 39, 39, 37, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 37, 38, 38, 38, 39, 38, 38, 38, 38, 36, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 37, 37, 39, 39, 39, 38, 33, 37, 37, 39, 39, 38, 36, 37, 38, 37, 36, 36, 37, 37, 37, 37, 38, 39, 39, 39, 38, 36, 38, 39, 34, 38, 39, 39, 37, 36, 36, 36, 32, 38, 37, 38, 39, 38, 39, 38, 38, 39, 37, 37, 37, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVKQRPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTIDTSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IFPGTGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRRGNWEAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LG" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD5-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-1" }, { "name" : "Source-Sequence", "value" : "EU106346" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKTSGYTFTSYWIQWVKQRPGQGLGWIGEIFPGTGTTYYNEKFKGKATLTIDTSSSTAYMQLSSLTSEDSAVYFCARRRGNWEAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3730 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15328:5033 (reversed)", "sequence" : "TAGACAGGTCCAGCTGCAGCAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTAACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACGATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGAGGGACCAACTGGGACGGGGGGTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCTTATCCCCTGCCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 32, 32, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 34, 37, 38, 38, 39, 39, 34, 39, 39, 38, 37, 39, 39, 39, 34, 37, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 38, 38, 37, 36, 38, 37, 32, 36, 33, 32, 36, 37, 39, 39, 37, 39, 20, 32, 38, 37, 37, 38, 34, 38, 39, 39, 39, 39, 36, 37, 16, 38, 39, 39, 39, 39, 39, 37, 39, 37, 30, 36, 38, 39, 39, 39, 20, 38, 39, 39, 39, 39, 39, 39, 39, 34, 33, 39, 39, 33, 39, 38, 39, 39, 39, 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"GGGCCAGGTGCAGCTGAAGGAGTTTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGGCTCCTCAGCAAAAACAACAGCCCCATCAGCCCATCCCTTGCGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 32, 32, 32, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 34, 37, 38, 37, 36, 38, 18, 15, 32, 32, 32, 37, 39, 38, 37, 16, 37, 37, 34, 15, 37, 36, 38, 16, 38, 39, 39, 34, 38, 14, 34, 38, 37, 38, 37, 39, 39, 35, 38, 36, 39, 37, 37, 37, 38, 39, 39, 37, 37, 16, 16, 33, 38, 37, 14, 32, 36, 39, 39, 16, 32, 36, 37, 38, 39, 39, 14, 36, 36, 38, 38, 33, 35, 39, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 35, 38, 39, 36, 33, 35, 38, 37, 37, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 38, 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"IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"ATAGGAGGTGCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGGCCTCTGGCTACAACTTCACCAGCTACTGGATAAACTGGGTGAAGCTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTAGTAATCACAAAAACGAGAAATTCAAGACCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGGCATCTGAGGGCTCTGCTCTCTATTACTGTGCAAGAGATGGGAACCGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTCCATCCCTTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 33, 37, 37, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 38, 37, 39, 39, 37, 38, 38, 38, 39, 38, 38, 39, 39, 39, 38, 39, 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33, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYNFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HKNEKFKTKATLTVDTSSSTAYMQLSSLASEGSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGSN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNRPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RDG" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { "name" : "Source-Sequence", "value" : "AF052381" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGSNHKNEKFKTKATLTVDTSSSTAYMQLSSLASEGSALYYCARDGNRPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3742 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15882:5043 (reversed)", "sequence" : "CATACAGGTCCACGTGAAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 37, 36, 38, 38, 37, 38, 33, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 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38, 38, 38, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3743 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20258:5043 (reversed)", "sequence" : "CCTCGAGGTGCAACTGGTGGAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGACCGCGGGGCTACAGGGCTTACTATGCTATGGACTACTGGGGTCAAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 33, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 33, 34, 37, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 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"name" : "ERR346596.3882 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19562:5141 (reversed)", "sequence" : "GATTCAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCGACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCCATCCCCTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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: false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSPSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3886 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14738:5143 (reversed)", 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGIYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ARSGEKYGALDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : 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"name" : "ERR346596.3888 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10867:5144 (reversed)", "sequence" : "GCACGAAGTGAAGGTTGAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGAGTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTATCTGCAAATGATCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGGCCTTCCTACTATGGTCATACTATGGACTACTGGGGACAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCTTGTGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 32, 33, 31, 33, 33, 37, 37, 37, 38, 19, 37, 38, 19, 37, 38, 37, 36, 36, 39, 39, 39, 38, 39, 39, 38, 17, 17, 36, 30, 36, 17, 37, 34, 37, 38, 38, 39, 37, 39, 39, 39, 39, 39, 38, 33, 38, 16, 36, 36, 39, 39, 37, 39, 39, 39, 39, 33, 37, 39, 37, 39, 39, 39, 39, 39, 20, 31, 38, 37, 39, 39, 16, 38, 39, 39, 39, 39, 37, 39, 33, 39, 39, 39, 39, 39, 39, 38, 38, 36, 38, 35, 19, 38, 39, 39, 37, 37, 39, 38, 39, 39, 37, 19, 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32, 34, 37, 38, 39, 36, 16, 39, 39, 39, 38, 38, 34, 38, 38, 38, 38, 38, 39, 30, 36, 36, 36, 36, 37, 37, 33, 32, 17, 37, 33, 33, 33, 37, 37, 37, 33, 32, 32, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQSPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMISLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPSYYGHTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMISLRSEDTAMYYCARPSYYGHTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3889 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11122:5144 (reversed)", "sequence" : "ATGGGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGTCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGACACAAGTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTCATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 32, 33, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 36, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 33, 34, 38, 39, 39, 38, 39, 38, 39, 38, 39, 37, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 15, 33, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 39, 38, 39, 39, 38, 38, 38, 38, 37, 33, 39, 38, 37, 38, 39, 37, 34, 33, 38, 33, 36, 39, 37, 34, 38, 37, 37, 39, 35, 35, 39, 34, 37, 38, 34, 30, 39, 38, 37, 37, 38, 33, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 38, 39, 38, 35, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 37, 38, 37, 30, 38, 37, 38, 39, 39, 39, 38, 39, 39, 39, 38, 36, 38, 37, 37, 37, 39, 37, 36, 32, 36, 36, 36, 37, 30, 36, 31, 36, 37, 34, 37, 18, 38, 36, 32, 39, 39, 39, 34, 39, 36, 36, 36, 36, 38, 38, 39, 38, 38, 38, 36, 38, 38, 37, 38, 37, 37, 31, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHKWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYFCARHKWAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3890 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6605:5144 (reversed)", "sequence" : "GTGCGAGGTCCAGCTGCAACAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGCAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGACTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGCCTATTACTGTGCAAGACGGCTTAACTGGGACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCCAGCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 37, 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"TTGTGATGTGCAACTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGTATGATAAAATAACCCGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCACTGATAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 35, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 36, 38, 37, 38, 38, 38, 36, 36, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDYGRAFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : 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"MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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"ERR346596.3894 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7041:5151 (reversed)", "sequence" : "GGAGCAGGTGCAGCTGAAGGAGTCTGGCCCTGGGATATTGCAGCCATCACAGTCTCTCGGCCTGGCCTGTACTTTCTCTGGGATTTCACTGATTACTTCTGATATGGGTTTGAGCTGGCTTCGTAAGCCCTCAGGGAAGGCTTTAGAGTGGCTGGCGAACATTTGTAATAATGACAAGTACTACAACCCATCTTTGAAGAGCCGGCTCACAGTCTCCAAGGAGACCTCCAACAATCAAGTTTTCCTTAAATTCACCAGTGTGGACACTACAGATTCTACAGCATACTACTGTGCTTGGAGAGAGCCCTTATATATGTACGGGTTTGCTTACTGGGGCCTAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGAAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 38, 38, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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37, 37, 37, 37, 37, 37, 37, 33, 32, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKMSCKAA" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWVAQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INCGGGYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 311, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" 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302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3906 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25077:5161 (reversed)", "sequence" : "AGAAGAAGTGATGCTGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAGACGACACCCCCATCAGCCTATCCCCTGAACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 37, 39, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 37, 39, 37, 39, 39, 39, 38, 39, 39, 25, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 36, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 38, 34, 34, 38, 34, 37, 37, 24, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 38, 30, 38, 38, 37, 37, 38, 37, 39, 39, 39, 39, 37, 39, 39, 39, 36, 27, 15, 39, 38, 39, 39, 37, 35, 36, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 38, 39, 37, 38, 39, 39, 39, 39, 34, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 37, 34, 36, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 36, 38, 36, 35, 38, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3767 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6515:5062 (reversed)", "sequence" : "TCTCGAGGTGAAGCTGGTGGAATCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAATGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTACAAGATCGGGGACATTAGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCCTGGATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 32, 33, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 37, 37, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 34, 38, 38, 38, 38, 39, 39, 39, 37, 38, 38, 37, 37, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 37, 39, 39, 37, 39, 37, 34, 38, 39, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 36, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 35, 31, 35, 39, 39, 38, 38, 33, 34, 37, 37, 37, 39, 38, 37, 37, 39, 38, 37, 38, 37, 14, 38, 39, 39, 39, 39, 37, 37, 37, 37, 37, 38, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 37, 37, 37, 39, 39, 36, 39, 39, 39, 39, 38, 39, 37, 39, 39, 38, 38, 38, 39, 36, 39, 37, 39, 39, 38, 33, 33, 19, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 36, 36, 14, 38, 39, 38, 38, 37, 37, 35, 37, 17, 36, 39, 37, 37, 39, 37, 38, 33, 39, 39, 37, 39, 39, 38, 33, 39, 38, 37, 34, 37, 38, 37, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 33, 39, 38, 38, 37, 39, 36, 30, 38, 37, 32, 36, 33, 37, 38, 37, 38, 39, 39, 36, 34, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 36, 32, 32, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTMKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSGTLGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTMKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCTRSGTLGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3771 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17468:5064 (reversed)", "sequence" : "CTGTGAGGTTCAGCTTCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACGTTCACCAGCTACTGGATGAACTGGATTAAGCAGAGGCCTGAGCAAGGCCTTGAGTGGATTGGAAGGATTGATCCTTACGATAGTGAAACTCACTACAATCTAAAGTTCAAGGACAAGGCCATATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGCTATGATGGTTACTACGTAGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCCCTGAGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 24, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 37, 39, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 38, 39, 38, 37, 36, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 38, 34, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWIKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNLKFKDKAILTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYDGYYVDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCKASGYTFTSYWMNWIKQRPEQGLEWIGRIDPYDSETHYNLKFKDKAILTVDKSSSTAYMQLSSLTSEDSAVYYCARSYDGYYVDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3772 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12442:5067 (reversed)", "sequence" : "AGGGGAGGTCCAGCTTCAGCAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAAAATTTATGCTGGTAGTGGTAGAATTAATTACGATGAAAAGTTCAAGACCAAGGTCACACTGACTGTAGACACATCTTCCAGCACAGCCTACATGCAGCTCAGCAGCATGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGAAAATTCATTACTACGGCTACCCTATCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCATGGTCTCTGCAGCAAAAACAACAGCCCCATCTGCCCATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 20, 38, 39, 39, 38, 37, 36, 37, 37, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 18, 37, 16, 38, 38, 39, 39, 39, 33, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 39, 36, 38, 18, 34, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 37, 37, 14, 30, 36, 37, 39, 38, 39, 38, 37, 36, 38, 39, 38, 14, 37, 37, 39, 38, 17, 33, 33, 35, 36, 30, 37, 38, 39, 37, 39, 39, 33, 38, 38, 37, 37, 38, 39, 39, 39, 31, 38, 38, 37, 39, 16, 38, 39, 38, 37, 35, 33, 35, 26, 15, 27, 16, 26, 37, 33, 25, 37, 35, 32, 15, 37, 37, 29, 37, 37, 37, 34, 38, 23, 35, 34, 35, 38, 39, 34, 38, 37, 2, 34, 38, 15, 26, 36, 34, 37, 39, 39, 39, 38, 38, 34, 22, 38, 38, 37, 38, 34, 38, 28, 15, 34, 37, 37, 37, 34, 37, 37, 38, 38, 33, 34, 15, 37, 36, 32, 38, 33, 38, 37, 38, 34, 16, 14, 16, 27, 29, 16, 16, 16, 38, 37, 37, 27, 16, 27, 16, 31, 16, 30, 16, 27, 16, 16, 16, 16, 31, 16, 32, 33, 14, 29, 14, 14, 16, 39, 38, 33, 37, 33, 39, 39, 39, 37, 29, 33, 39, 35, 36, 39, 37, 39, 38, 35, 38, 37, 39, 39, 39, 37, 29, 37, 38, 38, 37, 30, 14, 29, 30, 16, 16, 14, 38, 37, 32, 33, 16, 15, 39, 37, 36, 37, 33, 14, 38, 39, 39, 33, 35, 35, 37, 17, 37, 39, 38, 38, 36, 38, 37, 15, 16, 39, 38, 37, 34, 33, 39, 38, 37, 38, 34, 16, 37, 16, 33, 32, 32, 15, 14, 15, 15, 14, 32, 33, 15, 16, 16, 38, 32, 32, 14, 39, 33, 37, 15, 33, 32, 32, 15, 38, 38, 34, 38, 37, 38, 38, 15, 38, 38, 37, 38, 32, 32, 29, 16, 35, 35, 35, 35, 32, 16, 32, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGK" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKTKVTLTVDTSSSTAYMQLSSMTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYAGSGRI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVMVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRENSLLRLPYPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGKIYAGSGRINYDEKFKTKVTLTVDTSSSTAYMQLSSMTSEDSAVYYCTRENSLLRLPYPWFAYWGQGTLVMVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3773 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19894:5068 (reversed)", "sequence" : "ACCCGAAGTGAAGCTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGGCTCAAGATTCGATTTTAGTAGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGCTAGCAGTACGATAAACTATACGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAACGCCAAAAATACGCTGTACTTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAGGAAATGGTTACTACGGCTGGATTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTTCATCCCTTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 20, 35, 38, 39, 34, 30, 36, 39, 38, 39, 39, 38, 34, 38, 38, 39, 39, 38, 39, 39, 39, 38, 37, 32, 38, 37, 30, 36, 32, 37, 38, 38, 39, 39, 36, 34, 38, 37, 38, 39, 37, 39, 39, 39, 39, 38, 18, 37, 39, 37, 38, 38, 39, 39, 36, 38, 38, 37, 38, 38, 38, 38, 38, 37, 39, 38, 38, 38, 39, 39, 39, 39, 19, 38, 39, 37, 39, 39, 39, 30, 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39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 33, 36, 32, 32, 33, 37, 37, 37, 37, 33, 32, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : 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33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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[ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "*GQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NARGDYDFDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKRRFTISRDNAKNTLFLQMSSLKTEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"translation", "value" : "ISYSGSA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRAYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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38, 36, 36, 38, 39, 39, 39, 39, 38, 39, 38, 38, 36, 38, 37, 39, 38, 39, 38, 38, 37, 37, 36, 38, 39, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 38, 36, 37, 36, 38, 39, 38, 38, 38, 38, 38, 38, 38, 34, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 31, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : 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}, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFPLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMSSLQADDTAIYYCARGPRRNGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3979 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10369:5212 (reversed)", "sequence" : "CGTTCAGGTTCAGCTTCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGCGGTTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCTCATCCCTTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"GTTTCAGGTCCAGCTGCAGCAGTCTGGACCTTACCTGGTGAAGCCTGGGGCTTCAGTGAAGATTTCCTGCAAGACTTCTGGATACATATTCACTGACTACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTGTTAATCCTAACAGTGGTGCTGGTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTAACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGATCAATTTATAACTACTATTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTCATCCCTTGTCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPYLVKPGASVKISCKTSGYIFTDYTMHWVKQSHGKSLEWIGGVNPNSGAGTYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSIYNYYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3981 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11799:5213 (reversed)", "sequence" : "GCGGGAGGTGCAGCTTCAGCAGTCTGGACCTGAGCTGGAGGAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTCCAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAACCTTGAGTGGATTGGAAACATTGATCCTTACTATGGTGGTACTAGCTACAGCCAGAAATTCAAGGGCAAGGCCACTTTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAAAAAGGACTACGGTAGTAGCTCGTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCCTTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 31, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 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{ "sequence" : { "name" : "ERR346596.3841 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15067:5120 (reversed)", "sequence" : "GCGGCAGGTGCAGCTGAAAGAGTCTGGGGGAGGCTTAATGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAACCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGGTCGCCCGACTCCAGAGAAAAGGCTGGGGTGGGTCGCATACCTTAGTAATGGTGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAAAACCCTGTACCTGCAAATGAGCCGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACCCCTTCTAGACAGCTCGGGCTACGGCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCATCGGTCCATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 35, 16, 29, 16, 16, 16, 16, 16, 33, 32, 16, 37, 16, 33, 15, 15, 18, 32, 16, 32, 38, 37, 38, 38, 14, 14, 32, 14, 14, 37, 36, 16, 17, 35, 16, 16, 36, 34, 38, 37, 38, 39, 15, 33, 36, 36, 14, 15, 32, 37, 16, 16, 15, 33, 37, 16, 31, 16, 16, 31, 34, 16, 16, 31, 36, 16, 33, 16, 16, 29, 33, 34, 16, 16, 38, 16, 16, 37, 16, 33, 16, 33, 37, 39, 16, 31, 33, 17, 17, 16, 35, 38, 16, 33, 37, 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GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFALDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YFALDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGTSVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSEGRYYFAMNYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3847 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8410:5122 (reversed)", "sequence" : "GTGCGAGGTGAACGTGGTGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGAGGGTTACTACGCTTTGACTACTGGGGCCAAGGCACCACTCTCATAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCACTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 35, 33, 32, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 38, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 33, 38, 37, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 37, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 35, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 18, 39, 38, 38, 38, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 37, 38, 38, 37, 34, 35, 37, 37, 37, 37, 37, 33, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLIVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGLLRFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDRGLLRFDYWGQGTTLIVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3848 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17165:5123 (reversed)", "sequence" : "CTGCGAGGTTCAGCTTCAGCAGTCTGGACCTGAACTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTCACTCATTCACTGGTTACAACATGAACTGGGTGAAACAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTACTACTACCTTCAACCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTAACATCTGAGGACTCTGCAGTCTATTACTGTACAAGATCAAGGGCCTACTTTAGGGACTGGTTTGCTTACTGGGGCCAAGGGACCCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTTCATCCCTTGTGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 24, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 37, 39, 36, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 35, 38, 37, 37, 39, 39, 39, 36, 38, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 39, 38, 39, 38, 37, 37, 37, 36, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 37, 36, 37, 33, 33, 33, 37, 37, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GHSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TFNQKFKDKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPYYGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSRAYFRDWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKASGHSFTGYNMNWVKQSHGKSLEWIGNIDPYYGTTTFNQKFKDKATLTVDKSSSTAYMQLKSLTSEDSAVYYCTRSRAYFRDWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3849 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18004:5123 (reversed)", "sequence" : "AAATCAGGTTCAGCTCCAGCAGTCTGGAGCTGAACCGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTAGTAGTATTAACTGCAATGAGAGTTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTTAGCGGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGATGGTTGTACGGTAGCTGCGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGCCCATCCCTTGCCCG", "circular" : 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"translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LG" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD5-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-1" }, { "name" : "Source-Sequence", "value" : "EU106346" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGYINPRIGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARGNWEAMDYWGQGTSVTVSS" } ] } ] }, { 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, 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"IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAPYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3859 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18418:5129 (reversed)", "sequence" : 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(reversed)", "sequence" : "TCAGCAGGTCCAGCTGCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTAGGAGTAATATGGGGTGCTGGAATCACATACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAGCTTACCTGGGACGAGGGGGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCCCATCCCCTGGCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 32, 33, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 34, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 35, 38, 39, 38, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 37, 37, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 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32, 33, 32, 30, 37, 37, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGAGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKLTWDEGDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "23" }, { "name" : "Source-Identity", "value" : "92.15%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" 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"GCGAGAGGTGCAGCTGCAGCAGTCTGGGTCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCGCAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAGACCCTCTTTTTACTACGGTAGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCACTGCGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 35, 33, 37, 33, 37, 34, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 39, 32, 39, 37, 37, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 36, 37, 38, 39, 37, 39, 37, 37, 39, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 38, 38, 34, 38, 34, 38, 39, 39, 39, 39, 39, 37, 39, 39, 33, 35, 37, 39, 18, 37, 38, 39, 39, 39, 38, 39, 38, 37, 39, 36, 37, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 37, 39, 39, 39, 39, 37, 34, 36, 38, 38, 39, 38, 36, 39, 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39, 38, 38, 38, 36, 38, 38, 39, 38, 38, 38, 38, 38, 33, 37, 34, 38, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32, 29, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVKPGASVKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELVKPGASVKLSCAASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTRPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3876 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15902:5138 (reversed)", "sequence" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFISRLIITKDNSKSQVFFKMNSLQTNDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISNLAYSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARETTRGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"EVNVVESGGALVQPGGSRKLSCAASGFTFSDYGMAWVRQAPGKGPEWVAFISNLAYSIYYTGTVTGRFTISRENAKNTLYLEMSSLRSEDTAMYYCARETTRGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3924 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14856:5175 (reversed)", "sequence" : "GCCTGAGGTGAAGCTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGGTTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAATGCCCGTGGGGATTACGACTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCACTGTCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 32, 32, 33, 33, 34, 19, 32, 34, 32, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 36, 38, 39, 39, 39, 37, 34, 37, 36, 38, 30, 36, 37, 39, 39, 39, 38, 39, 34, 39, 38, 39, 39, 34, 38, 39, 37, 39, 39, 38, 38, 38, 38, 37, 37, 37, 38, 39, 39, 39, 39, 38, 39, 33, 38, 39, 20, 38, 37, 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"YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPQLVRPGASVKISCKASGYSFTSYWMHWVKQRPGQGLEWIGMIDPSDSETRLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCANLYGYLFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3927 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20348:5176 (reversed)", "sequence" : "CCGTCAGGTTCAGCTGCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTTCATCCCTTGTACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 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39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 34, 37, 38, 38, 37, 37, 33, 33, 33, 37, 37, 37, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IPPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKASGYTFTSYWINWIKQRPGQGLEWIGRIPPGSGTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARGSYYYGSSSPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3928 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21013:5177 (reversed)", "sequence" : "GGAACAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATACCCTGCAAGGCTTCTGGATACACATTCACTGACTACCACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGCGTGGATTGGAGATATTGATCCTAACAATGGTACTACTATCTACAACCGGAACTTCAAGGGCAAGGCCACATTGACTGTAGATAAGTCCTCCAGCACAGCCTACATGGAACTCCGCAGCCTGACATCTGAAGACACTGCAGACTATTACTGTGCAAGACCGAATACGACGCCGTTTGATTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTTCAGCCAAAACGACACCCCCATCAGCCTATCCCTTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 32, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 33, 38, 38, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 38, 39, 39, 38, 37, 38, 39, 37, 39, 39, 39, 38, 37, 37, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 32, 37, 38, 31, 21, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 38, 39, 38, 38, 37, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 37, 38, 38, 39, 39, 37, 35, 37, 38, 38, 38, 39, 37, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 34, 31, 31, 31, 32, 38, 36, 39, 39, 36, 39, 39, 39, 39, 39, 39, 37, 37, 37, 39, 39, 38, 38, 39, 39, 37, 39, 36, 39, 39, 39, 38, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 14, 36, 14, 36, 38, 39, 37, 38, 37, 29, 31, 36, 36, 36, 30, 38, 37, 39, 38, 18, 33, 37, 39, 39, 39, 39, 38, 38, 38, 39, 37, 39, 39, 39, 37, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 37, 36, 37, 38, 38, 38, 34, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 32, 33, 32, 33, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRIPCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MDWVKQSHGKSLAWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYH" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYNRNFKGKATLTVDKSSSTAYMELRSLTSEDTADYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPNNGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPNTTPFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, 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(reversed)", "sequence" : "AGGAGAGGAGAAGAAGGAGGAGGAAGGAGAAGAGATGGGGAAACAATAAAAGTAAATTACAATCACCTGCACTGTCACTAGCTAAAAAAAAAAAAAAAGTTATAACAGGCACTACACAAAGAAGATTAAAAACAACACACTGCAAACAAAAAGAAACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAGGGGGTTACTACGGTAGTAGCTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGTCCATCCCCTGTCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 16, 15, 15, 15, 15, 32, 15, 15, 15, 15, 15, 32, 15, 15, 16, 15, 15, 16, 16, 16, 14, 14, 14, 14, 14, 33, 32, 14, 16, 16, 16, 16, 16, 16, 16, 17, 17, 17, 35, 32, 16, 16, 16, 16, 16, 16, 16, 16, 33, 33, 33, 32, 33, 33, 33, 33, 36, 16, 17, 37, 36, 17, 33, 33, 17, 17, 31, 16, 16, 33, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 14, 16, 17, 17, 17, 17, 17, 29, 16, 27, 27, 14, 14, 15, 15, 16, 15, 16, 15, 16, 14, 15, 15, 15, 15, 15, 16, 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"name" : "translation", "value" : "EVHLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : 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: 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARDRRITTATYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3942 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12495:5185 (reversed)", "sequence" : "ACCTGAGGGATGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCCTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAGGGTGATTACGGTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCTGCCCATCCCTTGTCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 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"min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTLTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 184, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 183, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 340, "max" : 372, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 298, "max" : 339, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRVITVYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 372, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGHGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGKYDERTDIDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.49%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, 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38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 35, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQSHVESLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNPSVKGRFSISRDNSQGIFYLQMNTLRAEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKPSGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTAVNVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGANYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARFGRYYFDYWGQGATLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3960 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24428:5199 (reversed)", "sequence" : "TGGCCAGGTCCAACTCCAGCAGCCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAACAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGGTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCATTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 32, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 37, 32, 33, 37, 38, 37, 38, 33, 38, 39, 39, 39, 39, 38, 39, 39, 39, 34, 38, 39, 39, 39, 39, 39, 39, 20, 38, 39, 39, 39, 39, 39, 39, 38, 38, 17, 32, 32, 37, 20, 35, 38, 39, 39, 39, 37, 20, 38, 38, 39, 39, 39, 39, 39, 39, 33, 38, 38, 37, 36, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 36, 39, 39, 39, 39, 39, 37, 39, 37, 37, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 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38, 39, 38, 38, 36, 36, 34, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 32, 32, 33, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGFDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "80.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAREGFDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3907 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12804:5161 (reversed)", "sequence" : "GCATGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTGATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 35, 38, 38, 39, 39, 37, 39, 36, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 38, 37, 37, 39, 39, 37, 37, 39, 37, 37, 38, 37, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 38, 37, 37, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 37, 38, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 39, 39, 39, 36, 38, 36, 38, 35, 38, 39, 38, 38, 38, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 37, 39, 38, 36, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 36, 32, 33, 33, 33, 33, 33, 32, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSDGGDYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAASGFTFSNYYMCWIRQTPEKRLEWVATVSDGGDYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3908 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20442:5162 (reversed)", "sequence" : "TGCCGAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCGAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCTCATCCATTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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38, 37, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : 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"sequence" : "GGTGGAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACTGTAGACAAACCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCCATCCATTGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 29, 29, 32, 32, 32, 32, 32, 37, 37, 37, 38, 38, 38, 38, 33, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 33, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 36, 38, 39, 39, 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"TTTCGAGGTGCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGTTACTGGATAGAGTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCTACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAACCTACTATGCTTACGCCTGGTTTGTTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 34, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 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"TCGACAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTAAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCCTTAGCTAACTGGGACATTGGGGGCCCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCTATCCCTTGTCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 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38, 38, 38, 38, 37, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : 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323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", 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"EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : 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] } ] }, { "sequence" : { "name" : "ERR346596.4068 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23170:5266 (reversed)", "sequence" : "CGTTGAGGTGAAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTAGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCCCATCCCTTGAGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 17, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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"TCGGGAGGTGATGTTGGTGGAGTCTGGGGGAGACTTAGTGAGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTGGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTTCAAGACTGAGCTATGATTACGACGGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTCTATCCCTTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 35, 35, 33, 33, 33, 37, 37, 37, 32, 37, 38, 38, 36, 37, 34, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 30, 36, 35, 32, 37, 38, 38, 39, 38, 37, 35, 38, 39, 38, 38, 39, 38, 39, 38, 39, 35, 37, 36, 38, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 35, 37, 36, 39, 39, 39, 38, 39, 39, 38, 39, 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38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 38, 37, 32, 31, 37, 37, 37, 37, 32, 29, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVRPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRLSYDYDGAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVRPGGSLKLSCAASGFTFSSYDMSWVRQTPDKRLEWVATIGSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCSRLSYDYDGAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.3989 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7593:5216 (reversed)", "sequence" : "GTGCGAGGTGCAGCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACAATATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTATAACCAGAAGTTTAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTGCTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTTATCCACTGCTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 16, 32, 35, 35, 32, 30, 37, 37, 38, 38, 38, 38, 16, 15, 33, 15, 32, 32, 38, 39, 39, 39, 39, 16, 15, 37, 33, 38, 37, 38, 39, 39, 16, 37, 39, 39, 39, 39, 39, 39, 39, 16, 38, 39, 38, 38, 38, 14, 37, 39, 39, 39, 39, 33, 38, 39, 39, 16, 37, 16, 37, 38, 39, 39, 39, 39, 39, 33, 16, 37, 39, 39, 39, 39, 39, 39, 39, 16, 37, 16, 33, 17, 16, 33, 16, 33, 17, 33, 33, 16, 33, 38, 39, 31, 16, 33, 16, 16, 16, 33, 37, 38, 17, 33, 38, 38, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 15, 38, 33, 38, 39, 15, 37, 38, 39, 39, 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16, 38, 37, 37, 37, 37, 33, 16, 16, 35, 32, 32, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYCC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPELVKPGASVKVSCKASGYSFTDYNMHWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYCCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3990 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6996:5216 (reversed)", "sequence" : "TGGTGAGGTTCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGTCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGACACAAGTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCCTTGTCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 32, 35, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 39, 39, 39, 39, 37, 34, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 32, 38, 39, 38, 38, 38, 38, 39, 38, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 33, 39, 36, 38, 38, 39, 38, 39, 39, 39, 39, 37, 38, 38, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDKNYGSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDKNYGSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3997 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14362:5222 (reversed)", "sequence" : "GCTGCAGGTCCAACTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTTCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGCTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3998 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23975:5224 (reversed)", "sequence" : "CGGGGAGGTTCAGCTCCAGCAGTCTGGGGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACACGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAATTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATATAGGTACGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCTTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 35, 35, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 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"name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYRYDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARYRYDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.3999 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14201:5224 (reversed)", "sequence" : "AATCGAGGTCCAGCTCCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGGAGATTTCCTGCAAGGGTTCCAGTTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTAATTACTATGGTAATACTAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGGACTTGCCAGATTGACATCTGAGGATTCTGCCGTCTATTACTGTGCAAGATCGGGGTATAGGTACGAGGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTTTATCCACTGTTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 33, 33, 37, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 38, 37, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 38, 38, 37, 37, 36, 32, 30, 37, 36, 39, 39, 36, 39, 39, 39, 37, 33, 38, 39, 39, 39, 39, 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"TGTCGATGTAAAGCTTCAGGAGTCTGGACCTGAACTGGTGAAGCCCGGGGCTTCAGTGAAGATACCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTATCTACAACCAGAAATTCAAGGACAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACACTGCAGTCTATTACTGTGTAAGAGAGGACTGGGACGGGGACTTTGACTACTGGGGCCAAGGCACCATTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 34, 33, 34, 34, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 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32, 33, 33, 33, 33, 35, 33, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "DVKLQESGPELVKPGASVKIPCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MDWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYNQKFKDKATLTVDKSSSTAYMELRSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTILTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VREDWDGDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPELVKPGASVKIPCKASGYTFTDYNMDWVKQSHGKSLEWIGDINPNNGGTIYNQKFKDKATLTVDKSSSTAYMELRSLTSEDTAVYYCVREDWDGDFDYWGQGTILTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4130 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24093:5305 (reversed)", "sequence" : "GTCGCAGGTCCAACTGCAGCAGCCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGAGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 39, 39, 34, 37, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 36, 38, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"GAGAGAGGTGAAGCTGATGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCAGTAACTACTGGCTAGGTTGGTTAAAGCAGAGGCCTGGACATGGACTTGAGTGGATTGGAGATATTTACCCTGGAGGTCTTTATTCTAACTGCAATGACAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCTCTGCCTACATGCAGCTCAGTAGCCTGACATCTGAGGACTCTGCTGCCTATTTCTGTGCAACTTGGGGTCCGTATTTTTTTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTCATCCATTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 37, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 33, 33, 37, 36, 36, 38, 37, 39, 39, 37, 39, 39, 39, 39, 36, 32, 30, 37, 37, 38, 39, 38, 39, 38, 38, 39, 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37, 38, 37, 38, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 32, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"QVQLQQSGAELAKPGASVKMSCKASGYTFTSHWMHWVKQRPGQGLEWIGYINPSTGHTGYDQKFKDKATLTADKSPSTAYMQLSSLTSEDSAVYYCARGNWEAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4148 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8811:5317 (reversed)", "sequence" : "CATCCAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGATGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACTGTAGACAAATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGTCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSGLMSRLSISKDNSKSQVLLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ 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"IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGYGSSSYDTDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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38, 37, 38, 33, 35, 37, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 34, 39, 39, 38, 37, 36, 38, 39, 38, 38, 38, 38, 38, 38, 38, 36, 36, 39, 38, 38, 35, 37, 38, 37, 35, 20, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 36, 38, 38, 38, 37, 34, 36, 37, 37, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTYYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKASGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREYGYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFTYYYMSWVRQPPGKALEWLGFIRNKASGYTTDYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAREYGYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4018 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13680:5235 (reversed)", "sequence" : "GCTCGAGGTGAAGCTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCTGTCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 32, 38, 20, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 34, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 36, 38, 38, 38, 38, 39, 38, 39, 39, 39, 37, 38, 38, 38, 38, 39, 39, 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36, 34, 37, 33, 32, 35, 35, 30, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4019 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14191:5236 (reversed)", "sequence" : 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39, 38, 38, 38, 38, 38, 38, 38, 37, 34, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRTGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMGHYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062177" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "78.57%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELARPGASVKLSCKASGYTFTDYYINWVKQRTGQGLEWIGEIYPGSGNTYYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARSGDGYPRDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4021 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7900:5240 (reversed)", 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38, 38, 37, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVRQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTTDKSSSTAYMQLSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IFPGDNST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"CATGGAGGTGCAGCGGGTGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTTATCCCTTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 32, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 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39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4030 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16, 36, 38, 39, 38, 39, 38, 38, 39, 38, 32, 16, 39, 37, 38, 34, 39, 37, 37, 36, 36, 30, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 32, 32, 33, 33, 33, 33, 37, 33, 33, 32, 30, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VKGITTVVPRNYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 371, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCVKGITTVVPRNYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4031 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37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4032 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9576:5246 (reversed)", "sequence" : "TCGGCAGGTCCAACTGCAGCAGTCTGGACCTGAACTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTCATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGGAGGTATGGTAACTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACTGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTTATCCCCTGTATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 33, 37, 38, 39, 36, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 37, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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32, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRYGNYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYIHPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRYGNYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4033 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9322:5246 (reversed)", "sequence" : "GGGACAGGTGCAGCTGAAGCAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGGCGGGAGGGTAACCACGCTGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCATTGGTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 31, 32, 32, 32, 32, 37, 37, 34, 37, 37, 37, 38, 37, 38, 38, 16, 33, 38, 16, 32, 33, 16, 35, 38, 33, 38, 38, 39, 38, 38, 38, 39, 38, 39, 15, 33, 33, 37, 16, 35, 36, 32, 38, 39, 37, 39, 39, 37, 35, 37, 32, 32, 38, 37, 37, 38, 33, 38, 37, 39, 39, 37, 39, 39, 39, 39, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTISS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4082 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25513:5275 (reversed)", "sequence" : "CTGGGAAGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGACAGGGATACCATAGGTACGACGGGAGGGGGTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCATTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 37, 37, 38, 20, 38, 36, 37, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 37, 38, 38, 39, 37, 39, 39, 39, 38, 39, 37, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 33, 37, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 35, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 34, 35, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 34, 36, 39, 39, 38, 37, 38, 38, 37, 33, 38, 38, 38, 38, 37, 37, 38, 33, 37, 34, 25, 37, 37, 39, 37, 37, 38, 33, 38, 35, 37, 39, 39, 38, 39, 37, 39, 37, 37, 37, 38, 38, 38, 39, 38, 38, 37, 39, 38, 39, 39, 38, 38, 37, 37, 32, 37, 37, 38, 37, 39, 38, 37, 39, 39, 39, 39, 37, 37, 39, 37, 37, 36, 39, 39, 39, 37, 31, 39, 38, 39, 39, 39, 39, 38, 34, 33, 34, 39, 39, 39, 38, 37, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 38, 36, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 36, 38, 38, 35, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 35, 39, 39, 39, 39, 38, 34, 38, 38, 39, 39, 39, 36, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 38, 38, 37, 38, 39, 38, 38, 38, 39, 39, 39, 37, 38, 37, 33, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 36, 37, 36, 17, 38, 38, 38, 37, 36, 33, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQGYHRYDGRGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "99.66%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARQGYHRYDGRGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4083 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6470:5276 (reversed)", "sequence" : "TTCAGAGGTGATGTTGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAGCATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCTCATCCCCTGCCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 38, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 37, 37, 38, 38, 38, 38, 38, 38, 38, 33, 38, 39, 37, 38, 37, 39, 39, 39, 39, 39, 37, 39, 34, 37, 38, 39, 39, 37, 38, 38, 37, 39, 39, 38, 38, 33, 37, 37, 39, 38, 37, 37, 37, 38, 37, 37, 37, 39, 37, 37, 38, 37, 39, 39, 36, 39, 34, 33, 38, 38, 37, 37, 36, 39, 37, 37, 38, 39, 39, 38, 38, 38, 37, 36, 34, 38, 15, 38, 32, 33, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 37, 32, 24, 36, 39, 39, 39, 39, 38, 34, 36, 38, 38, 38, 39, 39, 39, 38, 38, 37, 38, 39, 37, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 36, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 36, 39, 39, 39, 39, 39, 39, 38, 34, 36, 36, 38, 38, 39, 39, 39, 39, 38, 38, 34, 38, 38, 38, 38, 39, 39, 38, 38, 38, 39, 39, 38, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 36, 35, 39, 38, 38, 38, 39, 38, 38, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 33, 38, 38, 38, 38, 38, 34, 33, 33, 33, 33, 33, 33, 37, 33, 33, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVKPGASVKLSCTASGFSIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4084 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9969:5277 (reversed)", "sequence" : "CTGCGAGGTGCAGCTGGTGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCTATCCCCTGCTAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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32, 31, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MRWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFKDKATLNVDKSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPSNSES" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } 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"ATTACAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTATATATACTGGGTGAAGCAGAGGCCTGGACAAGGCCCTGAGTGGATTGGAGAGATTAATCCTACCAATGGTGATAATAACTTCGTTGAGAAGTTCAAGAACAGGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCAAACATTCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGACGCAAGTGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCTGTTTATCCCTTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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37, 37, 37, 33, 33, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWVKQRPGQGPEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFVEKFKNRATLTVDKSSSTANIQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPTNGDN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRKWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "42" }, { 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32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTIS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLVV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPPGKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARHGNYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4091 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10644:5280 (reversed)", "sequence" : 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"qualities" : [ 32, 33, 33, 33, 33, 33, 35, 33, 33, 33, 33, 33, 38, 38, 38, 38, 37, 36, 37, 36, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 35, 37, 37, 38, 38, 39, 39, 39, 38, 38, 35, 34, 37, 39, 38, 36, 39, 38, 38, 39, 39, 38, 39, 39, 38, 39, 38, 39, 38, 37, 34, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 37, 37, 39, 39, 38, 39, 38, 39, 37, 37, 37, 37, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 38, 38, 38, 38, 38, 38, 33, 39, 39, 38, 15, 37, 39, 37, 37, 37, 37, 37, 37, 37, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 37, 39, 38, 37, 39, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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"DVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWAAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFAGTPYTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, 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"ERR346596.4115 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25452:5295 (reversed)", "sequence" : "TTGTGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGATTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACTTTATGAGCTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACCCTGCAGTCTATTATTGTGGAAGCTATGGTAACGCTTACTGGGGCCAAGGGACTCTGGCCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCTTATCCCTTGGCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 17, 36, 38, 39, 33, 38, 39, 39, 38, 39, 39, 37, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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38, 38, 38, 38, 38, 38, 37, 38, 37, 31, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGDSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAHMELLSLTSEDPAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLATVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSYGNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGDSVKISCKASGYSFTDYFMSWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELLSLTSEDPAVYYCGSYGNAYWGQGTLATVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4116 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14860:5295 (reversed)", "sequence" : "CAGCGAGGTGAAGCTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCTTCACTAACTACTGGATAGGTTGGATAAAACAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACTGTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAACACAACCTACATGCATCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTTCTTACTGGGGCCAGGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTTTATCCCTTGCGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 35, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 32, 38, 38, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 37, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 37, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 35, 37, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 37, 33, 34, 38, 39, 38, 36, 37, 39, 39, 39, 39, 39, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 36, 39, 37, 38, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 38, 39, 34, 39, 33, 38, 37, 39, 39, 37, 36, 38, 39, 39, 39, 39, 37, 37, 39, 38, 38, 37, 37, 16, 37, 38, 37, 39, 38, 37, 39, 39, 37, 39, 37, 39, 34, 34, 38, 38, 38, 37, 37, 33, 17, 17, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGTSVKMSCKAA" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWIKQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSNTTYMHLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYCGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 311, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRPGTSVKMSCKAAGYTFTNYWIGWIKQRPGHGLEWIGDIYCGGGYTNYNEKFKGKATLTADTSSNTTYMHLSSLTSEDSAIYYCAREGSYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4117 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9889:5296 (reversed)", "sequence" : "ACCAGCGGTGATGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCACCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAGCTCCAAGAGGCAAATTTTCTTAAAAAGGAACAGCCTGGAAACCGATGACGCAGCCATGTACTGCGGTGCCAGAGACTATCTTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGGCTCCTCAGCTAAAACAACAGCCCCATCAGCTTATCCCCTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 32, 16, 32, 16, 16, 16, 16, 18, 18, 16, 33, 32, 16, 15, 15, 32, 15, 32, 32, 33, 16, 35, 15, 32, 32, 32, 33, 15, 33, 15, 15, 16, 15, 14, 33, 33, 14, 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"CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4120 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKRKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGDYYGSPGVYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : 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: false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKRKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRRGDYYGSPGVYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4246 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14006:5370 (reversed)", "sequence" : "TACCCAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGACTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGACGGCTTAACTGGGACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAGACGACACCCCCATCGGCTTATCCATTGGGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 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38, 38, 38, 37, 37, 37, 37, 37, 32, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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37, 38, 38, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTS*VMHWMKQKPGQGLEWIGYINPYNDGTKYNETFKGKATLTSDKSSSTAYMDLSSLTSEDSAVYFCARSEYFGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4249 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVHYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", 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"EVQLQQSGAELVRPGASVKLSCKASGYAFTSYWMNWVKQRPEQGLEWIGRIDPYDNETHYNQKFKDKAILTVDKSSSTAYMQFSSLTSEDSAVYYCAREDLYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4281 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8992:5397 (reversed)", "sequence" : "GGACGAGGTGCAGGGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGAAGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGTAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACAACACCCCCATCAGTCTATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 36, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 39, 39, 37, 37, 38, 37, 36, 35, 38, 34, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 39, 39, 37, 38, 32, 38, 39, 39, 38, 37, 39, 38, 39, 37, 39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 19, 33, 33, 33, 33, 37, 37, 37, 33, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVWGRFTISRDNAKNNLYL*MSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGGYTYYPDSVWGRFTISRDNAKNNLYL*MSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4282 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17477:5397 (reversed)", "sequence" : "GAAGCAGGTGCAGCTGAAGGAGTCTGGGACTGTGCTGGCAAGGCCAGGGGCTTCATTGAGGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAATGATGCCAAATACACCCAGAAGTTCAAGGCCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCGACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTGCAAGAAACTGGGACTGGGTGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTTTATCCACTGATTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 31, 37, 37, 37, 37, 38, 38, 38, 38, 37, 36, 35, 37, 37, 32, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 35, 39, 39, 39, 39, 39, 38, 38, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 33, 38, 38, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 39, 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39, 39, 39, 39, 38, 36, 38, 35, 38, 38, 37, 38, 38, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPGNNDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWDWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGTVLARPGASLRMSCKASGYTFTNYWINWIKQRPGQGLEWIGAIYPGNNDAKYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYCARNWDWVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4283 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24000:5398 (reversed)", "sequence" : 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"sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 32, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 37, 38, 35, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 34, 38, 38, 37, 39, 39, 39, 37, 38, 38, 37, 37, 39, 38, 39, 38, 26, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 36, 34, 34, 35, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 27, 39, 39, 39, 33, 34, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 23, 38, 36, 38, 37, 36, 36, 32, 36, 38, 38, 37, 38, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 38, 37, 34, 38, 38, 38, 37, 35, 38, 39, 39, 39, 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"QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4295 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12140:5403 (reversed)", "sequence" : "GTAACAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGTACGCGGGTTTGCTTACTGGGGCCAAGGGGCTCTGGTCACTGTCTCTGCAGCCAAATCAACACCCCCATCAGTCTATCCACTGGGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 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37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 39, 39, 38, 39, 39, 36, 37, 38, 39, 37, 38, 39, 37, 39, 38, 38, 39, 38, 37, 33, 17, 38, 39, 37, 38, 39, 39, 38, 38, 38, 39, 38, 33, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 37, 37, 37, 37, 37, 33, 37, 33, 32, 30, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHPSDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGALVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGVRGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" 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"TAATGAGGTACAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGCCTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTTATCCACTGACAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVRSGASVKLSCTASGFNIKDYYMHWVKQRPEQGLEWIGWIDPENGDTEYAPKFQGKATMTADTSSNTAYLQLSSLTSEDTAVYYCNARGDYDFDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4308 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21922:5414 (reversed)", "sequence" : "TACCGAGGTGAACGTGGTGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCATCTTCACTGATTACTATATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTTCTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCACTGCTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 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38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 37, 39, 39, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 38, 37, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 32, 39, 38, 37, 36, 38, 39, 38, 39, 38, 38, 34, 38, 39, 38, 36, 16, 39, 39, 38, 33, 39, 38, 38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVNVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFIFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] 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"ATCTCAGGTCCAACTGCAGCAACCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGGTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGTCCCCCTCTCTACTATGATTACGGATTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCCTGTGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 19, 37, 39, 39, 39, 34, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 38, 36, 38, 39, 38, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 37, 39, 39, 38, 39, 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37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 34, 32, 33, 35, 33, 32, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASMKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGPPLYYDYGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 368, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.59%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LPPHRVWGQGTLVTVSS" }, { "name" : "translation", "value" : "LP" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { "name" : "Source-Sequence", "value" : "M24236" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASMKVSCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTRYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARGPPLYYDYGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4311 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24457:5416 (reversed)", "sequence" : "CCGTGAGGTCCAGCTCCAACAGTCAGGACCTGGCCTGGTGGCGCCCTCACACAGTCTGTCCATCAGTTGCACTGTCTCTGGGTTTTCATTAACCAGCTTTGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGAAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCCGACTGACCATTAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACGCAGCCGTGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTACCTGCTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 16, 16, 29, 16, 32, 37, 29, 16, 33, 34, 34, 16, 37, 16, 33, 32, 16, 34, 16, 15, 38, 33, 16, 33, 33, 32, 15, 33, 38, 38, 37, 15, 15, 33, 32, 15, 33, 32, 32, 37, 36, 38, 36, 14, 32, 38, 39, 38, 16, 16, 14, 33, 33, 33, 16, 16, 35, 17, 16, 17, 35, 35, 32, 16, 17, 35, 32, 33, 37, 37, 35, 38, 35, 37, 35, 36, 35, 33, 16, 33, 33, 37, 14, 14, 37, 17, 37, 39, 17, 37, 33, 33, 37, 37, 39, 36, 16, 31, 31, 37, 38, 37, 29, 37, 38, 35, 16, 16, 16, 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37, 37, 14, 37, 36, 33, 14, 32, 15, 36, 32, 15, 36, 37, 36, 16, 36, 16, 18, 16, 37, 31, 16, 32, 33, 37, 32, 16, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSHSLSISCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLTISKDNSKSQVFFKMNSLQTDDAAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSHSLSISCTVSGFSLTSFGVHWVRQPPGKGLEWLGEIWADGSTNYNSALMSRLTISKDNSKSQVFFKMNSLQTDDAAVYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4312 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12679:5417 (reversed)", "sequence" : "GCGGCAGGTTCAGCTTCAGCAATCTGGGCCTGAACTGGTAAGGCCTGGGGCTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACTCCTTCACCAACTACTTGGTAGACTGGGTAAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGCATGATTTATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAACACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCATTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 16, 16, 29, 35, 35, 35, 37, 37, 37, 37, 34, 38, 38, 33, 16, 37, 38, 37, 38, 37, 39, 37, 16, 35, 38, 15, 15, 33, 32, 15, 15, 33, 38, 39, 34, 39, 38, 16, 32, 16, 37, 38, 39, 16, 14, 32, 36, 14, 32, 36, 38, 15, 16, 16, 37, 38, 16, 38, 38, 16, 33, 16, 33, 33, 35, 37, 16, 32, 37, 37, 16, 37, 32, 16, 37, 37, 39, 39, 39, 16, 35, 17, 31, 16, 33, 33, 37, 38, 37, 37, 39, 16, 16, 14, 14, 33, 31, 16, 33, 31, 16, 16, 33, 37, 16, 33, 16, 33, 38, 39, 39, 38, 16, 33, 35, 33, 37, 37, 39, 37, 32, 36, 36, 37, 16, 37, 39, 37, 39, 39, 36, 37, 38, 33, 33, 38, 39, 36, 37, 39, 39, 39, 38, 38, 39, 37, 15, 38, 13, 27, 37, 38, 38, 39, 39, 15, 31, 33, 33, 37, 38, 37, 15, 15, 16, 15, 30, 16, 37, 27, 14, 14, 14, 33, 24, 28, 16, 28, 29, 27, 27, 10, 26, 29, 16, 38, 37, 16, 37, 33, 15, 33, 37, 27, 37, 34, 35, 34, 14, 36, 38, 36, 34, 34, 24, 38, 38, 36, 25, 34, 38, 37, 37, 39, 38, 39, 38, 33, 25, 31, 21, 25, 37, 37, 21, 12, 27, 2, 24, 37, 28, 2, 37, 34, 34, 37, 35, 37, 37, 33, 16, 35, 37, 37, 2, 26, 34, 37, 33, 16, 37, 16, 37, 38, 30, 15, 15, 37, 35, 17, 31, 38, 33, 33, 38, 35, 37, 17, 29, 31, 16, 30, 34, 33, 27, 14, 34, 37, 37, 33, 37, 35, 37, 16, 37, 16, 15, 16, 33, 16, 33, 16, 14, 38, 30, 14, 36, 36, 36, 14, 30, 14, 37, 38, 37, 29, 29, 15, 33, 15, 16, 31, 37, 35, 37, 37, 37, 37, 39, 38, 38, 38, 39, 39, 38, 39, 36, 39, 37, 39, 39, 37, 39, 37, 38, 33, 38, 39, 39, 39, 37, 37, 36, 16, 37, 34, 38, 39, 38, 38, 39, 38, 39, 39, 36, 34, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 37, 38, 37, 36, 16, 38, 34, 38, 38, 37, 33, 37, 37, 37, 37, 32, 32, 16, 16, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VDWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSNTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSCFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGASVKVSCKASGYSFTNYLVDWVKQRPGQGLEWIGMIYPGSGGTNYNEKFKGKATLTADKSSNTAYMQLSSLTSDDSAVYFCARRDGSCFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4314 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17866:5418 (reversed)", "sequence" : "GTGGGATGTGCAGCTTCAGGAGTCTGGGGCTGAACTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCCAGTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAACATTTATCCTTCTGAAAGTTATACTAACTACAATCACAATTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACGGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGCGATGGTTATTACGGAGGGGCCCCCTACTGGGGCCGAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTTCATCCCCTGTGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 37, 38, 38, 39, 38, 39, 37, 19, 34, 36, 36, 36, 36, 38, 39, 39, 38, 33, 37, 33, 38, 35, 38, 39, 38, 38, 39, 38, 38, 38, 36, 36, 36, 39, 39, 39, 39, 35, 37, 37, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 17, 38, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 38, 39, 39, 37, 39, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 35, 35, 38, 38, 38, 37, 38, 38, 37, 39, 39, 39, 38, 39, 37, 38, 37, 39, 37, 38, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 33, 37, 36, 38, 34, 34, 12, 38, 30, 34, 37, 39, 38, 33, 37, 37, 37, 39, 39, 39, 39, 39, 39, 36, 34, 34, 14, 38, 34, 39, 39, 39, 39, 39, 39, 37, 36, 38, 37, 37, 39, 38, 39, 36, 39, 39, 38, 37, 38, 38, 35, 39, 39, 38, 33, 39, 39, 37, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 34, 36, 30, 32, 39, 37, 37, 38, 35, 36, 30, 36, 30, 37, 35, 36, 37, 38, 37, 37, 37, 36, 38, 39, 39, 38, 38, 37, 20, 38, 37, 37, 37, 38, 39, 36, 18, 16, 34, 37, 37, 38, 32, 32, 16, 38, 37, 37, 37, 38, 39, 36, 38, 36, 30, 34, 39, 34, 38, 38, 38, 38, 38, 38, 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16, 29, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGTELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "83.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : 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{ "sequence" : { "name" : "ERR346596.4170 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11061:5329 (reversed)", "sequence" : "GATGGAGGTGAAGCTGATGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGCATGTCTTGGGTTCGCCCGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGGCGTATTGTAAAATAACCCGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCTTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 33, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 19, 36, 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37, 38, 38, 38, 39, 38, 37, 37, 37, 37, 37, 32, 37, 14, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 36, 38, 38, 33, 16, 16, 37, 37, 32, 32, 32, 37, 37, 37, 32, 29, 16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRPTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAYCKITRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGDLVKPGGSLKLSCAASGFTFSNYGMSWVRPTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARAYCKITRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4172 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14316:5330 (reversed)", "sequence" : "GGGGGAGGTCCAGCTGCAGCAGTCCATCCCCATCAGCTCATCCACTGCGCTAGATCGGAAGAGCACACGTCCGAACTCCAGTCACAGTTCCGTATATCGTATGCCGTCCTCTGCTTGAAAAAAAAATGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAAAACTAAATTTGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAGCACAGCCTTCCTGCAGCTCCGCAGCCTGACATCTGAGGACACTTCCTTCTATTTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGGGGGAGGTCCAGCTGCAGCAGTCCATCCCCATCAGCTCATCCACTGCGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 35, 35, 35, 32, 34, 37, 37, 32, 38, 38, 38, 33, 34, 32, 16, 38, 38, 39, 39, 33, 36, 36, 16, 34, 38, 32, 15, 37, 15, 37, 16, 16, 32, 32, 16, 32, 32, 16, 37, 38, 16, 38, 16, 36, 14, 36, 36, 30, 38, 17, 32, 37, 14, 36, 37, 38, 32, 36, 38, 16, 38, 38, 15, 36, 29, 29, 14, 14, 14, 30, 29, 37, 38, 34, 34, 38, 17, 16, 16, 37, 38, 16, 31, 17, 17, 17, 29, 16, 33, 15, 16, 17, 17, 14, 15, 15, 15, 15, 17, 16, 29, 14, 27, 14, 30, 16, 16, 33, 16, 16, 33, 33, 15, 33, 38, 16, 37, 14, 14, 14, 14, 15, 30, 27, 37, 27, 37, 15, 14, 37, 34, 36, 37, 37, 38, 39, 39, 37, 38, 38, 37, 38, 37, 34, 37, 39, 33, 34, 32, 34, 35, 39, 14, 35, 36, 35, 37, 38, 37, 14, 10, 26, 32, 34, 38, 37, 34, 38, 39, 39, 37, 39, 39, 38, 33, 37, 15, 33, 33, 33, 33, 37, 37, 37, 30, 31, 30, 30, 13, 33, 33, 37, 37, 37, 36, 30, 36, 36, 24, 13, 12, 30, 32, 10, 24, 14, 24, 31, 33, 33, 37, 37, 33, 37, 37, 30, 37, 24, 33, 37, 33, 35, 33, 37, 37, 37, 37, 35, 33, 14, 24, 32, 33, 37, 32, 36, 37, 37, 37, 37, 37, 37, 14, 33, 2, 2, 2, 2, 2, 36, 37, 32, 33, 34, 15, 26, 15, 25, 15, 27, 15, 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"min" : 140, "max" : 154, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "KFDPKFQGKATITADTSSSTAFLQLRSLTSEDTSFYFF" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGKT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 356, "max" : 388, "direction" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", 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"ACGACAGGTGCAGCTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTTCCTATTACTACGGTAGTAGCTCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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38, 37, 37, 32, 32, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4200 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13878:5342 (reversed)", "sequence" : "GCGAGAGGTTCAGCTGCAGCAGTCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAATTACTACGGTAGTAGTTCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCATTGATCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 33, 32, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 18, 32, 38, 38, 39, 38, 38, 38, 38, 36, 17, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 36, 39, 39, 39, 39, 39, 37, 39, 39, 39, 33, 38, 38, 33, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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29, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSVLVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWAKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHPNSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ANYYGSSSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSVLVRPGASVKLSCKASGYTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTNYNEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCANYYGSSSYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4321 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13927:5423 (reversed)", "sequence" : "CATGGAGGTCCAGCTGCAACAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATAACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGAGGTGGAAGCACAGACTACAATGCAGCTTTCATGTCCAGACTGAGCATCACCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGATACTGCCATATACTACTGTGCCAAAGGGACTGGGAACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTTCATCCCTTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 35, 35, 34, 34, 37, 37, 35, 35, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 35, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 19, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFMSRLSITKDNSKSQVFFKMNSLQADDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWRGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKGTGNGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGVIWRGGSTDYNAAFMSRLSITKDNSKSQVFFKMNSLQADDTAIYYCAKGTGNGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4323 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19879:5423 (reversed)", "sequence" : "TCATCAGGTCCAACTACAGCAACCTGGGGCTGAGCTTGTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGGCCTCTGGCTACAACTTCACCAGCTACTGGATAAACTGGGTGAAGCTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTAGTAATCACAAAAACGAGAAATTCAAGACCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGGCATCTGAGGACTCTGCTCTCTATTACTGTGCAAGAGATGGGAACTGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTCTATCCATTGCGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGFRAAYLDYWGKGTSVSVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "GG" }, { "name" : "IMGT_allele", "value" : "IGHD6-19*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-19" }, { "name" : "Source-Sequence", "value" : "AY392864" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSRKLSCAASGFTFSDYGMAWVRQAPGKGLEWVGFISNLAYSIDYADTVTGRFTIARENAKNTLYLEMSSLRSEDTAMYYCAREGGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4214 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38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 36, 36, 34, 36, 38, 34, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 31, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MEWVRQPPGKRLEWIAA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRNKANDYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", 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"TCCGCAGGTCCAACTGCAGCAGCCTGGGGCAGAGCTTGCGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAAACCCTCTTTTTACTACGGTAGTAGTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCACTGAGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 29, 35, 31, 33, 34, 31, 34, 37, 37, 36, 37, 37, 38, 38, 34, 38, 38, 37, 37, 37, 37, 39, 38, 38, 34, 30, 36, 37, 39, 39, 39, 37, 39, 38, 36, 36, 32, 32, 36, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 35, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 16, 38, 39, 39, 37, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 33, 38, 38, 38, 39, 37, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 33, 39, 39, 39, 39, 39, 37, 36, 36, 32, 37, 37, 37, 33, 38, 39, 39, 38, 38, 36, 39, 38, 36, 34, 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39, 36, 36, 36, 36, 15, 36, 36, 36, 34, 38, 36, 38, 38, 38, 33, 37, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELAKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TKPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", 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"CGACGAAGTGAAACTTGAGGAGTCTGACGCTGAGTTGGTGAAACCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGAAGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTAAAAGATCTGATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTTATCCACTGAACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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"GTCAGAGGTTCAGCTCCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGTTCATCCCTTGCCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 38, 39, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 37, 33, 36, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 37, 37, 36, 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33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGLIYYDYDDGPHMDY" } ] }, { "name" : 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299, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARNYGSSYYYAMGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4230 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21598:5363 (reversed)", "sequence" : "TTGCGATGTGCACCTGGTGGAGTCTGGGTCAGGGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCGCAGCTTCTGGCTTCAACATTAAAGACGCCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAGACCCTCTTTTTACTACGGTAGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCACTGAAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 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37, 36, 36, 14, 37, 36, 36, 33, 34, 38, 36, 38, 38, 39, 36, 32, 39, 39, 39, 38, 39, 38, 38, 38, 36, 38, 38, 39, 38, 37, 38, 33, 36, 38, 37, 34, 16, 34, 34, 33, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGSGLVKPGASVKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDAY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGSGLVKPGASVKLSCAASGFNIKDAYMHWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCTRPSFYYGSSYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4231 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13254:5364 (reversed)", "sequence" : "GTGGGAGGTCCAGCTGCAACAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAGGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTTCCTATTACTACGGTAGTAGCTCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCCATCCCTTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 39, 39, 39, 39, 39, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 37, 37, 37, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 30, 32, 36, 38, 38, 38, 36, 38, 39, 39, 37, 37, 37, 34, 34, 32, 24, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 38, 37, 37, 39, 39, 39, 38, 39, 38, 39, 37, 37, 38, 38, 39, 36, 39, 37, 38, 37, 38, 33, 39, 37, 38, 33, 39, 38, 39, 39, 38, 16, 34, 34, 35, 38, 38, 38, 37, 35, 33, 37, 37, 37, 39, 38, 37, 37, 39, 39, 39, 32, 39, 39, 39, 38, 39, 39, 37, 38, 37, 30, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 38, 39, 39, 38, 37, 39, 37, 36, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 38, 37, 36, 32, 38, 38, 36, 36, 32, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 34, 37, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4232 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14865:5365 (reversed)", "sequence" : "GGCGGAGGTGCAGCGGGTGGAGTCTGGGCCTGGCCTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGCGCAGCCTCTGGATTCTCTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGGATCCATTAGTAGTGGTGGTAGCACCTACTATTCAGACAGTGTGAAGGGCCGATTGACCATCTACAGAGATAATGCCAGGAACATCCTGTACCTGCAAATGAGCAGTCACAGGTCTCAGGGCACGGCCATATATTACTATGCAAGAGAGGTGGATGGTTCGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 29, 32, 16, 32, 35, 35, 35, 32, 32, 37, 37, 38, 38, 32, 36, 15, 32, 32, 32, 38, 38, 39, 39, 37, 39, 39, 37, 14, 14, 14, 14, 14, 15, 15, 33, 33, 37, 39, 39, 37, 37, 39, 39, 39, 39, 38, 39, 15, 33, 14, 14, 36, 37, 38, 37, 39, 39, 33, 16, 37, 33, 37, 38, 38, 39, 39, 37, 39, 16, 14, 36, 14, 36, 34, 37, 39, 39, 39, 39, 39, 16, 37, 33, 35, 17, 37, 17, 37, 38, 33, 38, 17, 33, 37, 38, 33, 38, 39, 37, 37, 27, 33, 27, 38, 38, 33, 37, 17, 33, 38, 39, 36, 36, 34, 38, 34, 30, 38, 38, 38, 39, 38, 36, 39, 39, 37, 39, 16, 14, 37, 38, 37, 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32, 32, 35, 35, 32, 16, 32, 29, 16, 16, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGPGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVGS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYSDSVKGRLTIYRDNARNILYLQMSSHRSQGTAIYYY" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREVDGSYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGPGLVKPGGSLKLSCAASGFSFSSYAMSWVRQTPEKRLEWVGSISSGGSTYYSDSVKGRLTIYRDNARNILYLQMSSHRSQGTAIYYYAREVDGSYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4233 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16839:5365 (reversed)", "sequence" : "GTTACAGGTGCAGCTGAAGGAGTCAGGACCTGACCTGGTGAAGCCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTTATTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATACACTACAGTGGTACCACTGTCTACAACCCGTCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAATAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATTCGCTGGGACCCCCTATACTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTCATCCACTGTCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 40, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 17, 37, 38, 39, 39, 38, 39, 39, 39, 37, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 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38, 37, 38, 37, 35, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSYYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFAGTPYTMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPDLVKPSQSLSLTCTVTGYSITSYYSWHWIRQFPGNKLEWMGYIHYSGTTVYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYCARFAGTPYTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4234 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19648:5366 (reversed)", "sequence" : "CCGTGAGGTGAAGCTTCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCAATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTTTATCCCCTGGGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 32, 37, 37, 33, 37, 37, 34, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 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"name" : "translation", "value" : "GYIFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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311, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGTSVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSEGRYYFAMNYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4369 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17745:5452 (reversed)", "sequence" : "GTGGCAGGTCCCGCTCCAGCAAACTTGGTCTGTGCTGGTGAGGCCTGGAGCTTTAGTGAAGCTGTCCTGCAAGGCTTTTGGCTACACCCTCACCAACTCCCGGATGCACTGGGGGGAGGAGAGGGCTGGACAAGGGCCTTAGTGGATTGGAGATATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTCCAGGGGCAAGGCCACACTGACTGTAGACACATCCTCCAACACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATCCTATAGGTTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCACTGGGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 32, 33, 16, 31, 16, 16, 16, 16, 15, 36, 16, 16, 33, 32, 37, 16, 15, 32, 16, 16, 37, 16, 16, 17, 15, 35, 32, 16, 17, 16, 33, 32, 33, 16, 33, 38, 14, 32, 16, 14, 33, 15, 32, 32, 15, 33, 16, 16, 16, 16, 16, 17, 33, 16, 16, 16, 16, 33, 16, 33, 17, 16, 16, 33, 37, 16, 32, 14, 16, 29, 15, 31, 16, 14, 16, 16, 33, 33, 16, 37, 39, 14, 37, 14, 15, 14, 33, 16, 14, 14, 15, 33, 37, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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38, 38, 37, 34, 37, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVPLQQTWSVLVRPGALVKLSCKAF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKSRGKATLTVDTSSNTAYVDLSSLTSEDSAVYYC" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" 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"max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRLRAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGIYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGTNTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRRGIYDERTAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4252 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6042:5376 (reversed)", "sequence" : "AATCGAGGTCCAGCTGCAACAGTCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAAGTGGTGGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCTGGTCACTATCTCTGCAGCCAAAACAACACCCCCATCAGCTTATCCACTGTACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 32, 32, 32, 16, 32, 35, 32, 37, 37, 33, 38, 38, 38, 38, 38, 16, 16, 37, 38, 38, 39, 39, 39, 39, 39, 37, 38, 37, 39, 39, 33, 38, 36, 39, 39, 38, 38, 38, 34, 39, 39, 38, 39, 39, 38, 39, 38, 37, 37, 39, 39, 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"value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTISA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVLGRPF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTLVTISA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4254 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8183:5378 (reversed)", "sequence" : "AGCAGAGGTGCAGCTTCAGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGTACGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAACCAACACCCCCATCTGCCTATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"name" : "translation", "value" : "MNWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHPSDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGVRGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVRPGASVKLSCKASGYSFTSYWMNWVKQRPGQGLEWIGMIHPSDSETRLNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCARGVRGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4255 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25003:5378 (reversed)", "sequence" : "TACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAGGGCGTTGAGTTCGATAATGGTGATATGTATGTTGACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTACTGAGAAGTTAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTATAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAG", "circular" : 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}, { "name" : "translation", "value" : "GRDSVFSYAGR*VR*W*YVC*RP*GCF*RS**VCIC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 51, "max" : 63, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 252, "max" : 281, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "APKGTKNGF*" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 172, "max" : 251, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.4256 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9745:5379 (reversed)", "sequence" : 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"gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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"GGAGCAGGTGCAGCTGAAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGATACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGGTTTCCATTTTACTACGGTAGTAGCTTTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCCTGCTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 17, 36, 17, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 38, 37, 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39, 37, 37, 17, 32, 36, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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38, 38, 38, 36, 37, 36, 39, 38, 38, 38, 38, 38, 39, 36, 32, 37, 32, 37, 36, 38, 34, 38, 37, 37, 33, 33, 37, 37, 33, 37, 32, 32, 32, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYGARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4262 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24154:5385 (reversed)", "sequence" : "GGATCAGGTCCAGCTGCAGCAATCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGAATTCACTTTTAGTGACGCCTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGAAGCAAAGCTAATAATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTAGTACTGTACCAGGTCTAACTGGGCCACCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTCCATCCACTGATCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 38, 33, 38, 20, 19, 17, 32, 37, 35, 36, 39, 39, 38, 35, 38, 36, 37, 37, 39, 18, 33, 37, 36, 37, 39, 39, 17, 33, 18, 33, 33, 32, 37, 39, 38, 39, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 35, 37, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 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34, 39, 39, 36, 37, 39, 39, 38, 33, 39, 36, 36, 36, 36, 38, 38, 39, 38, 38, 37, 33, 38, 37, 37, 16, 32, 37, 34, 31, 37, 37, 37, 37, 31, 32, 32, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGGLVQPGGSMKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MDWVRQSPEKGLEWVAE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EFTFSDAW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGI*YC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRSKANNHAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSNWATWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP GKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVY YCTT" }, { "name" : "IMGT_allele", "value" : "IGHV3-15*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-15" }, { "name" : "Videntity", "value" : "100,00% (302/302 nt)" }, { "name" : "Source-Sequence", "value" : "M24236" }, { "name" : "Source-Mismatches", "value" : "70" }, { "name" : "Source-Identity", "value" : "76.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : 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"GGCGGAGGTCCAGCTGCAACAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAAGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGAGATTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACAACACCCCCATCGGTCTATCCCTTGCTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 31, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 36, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 34, 38, 37, 34, 38, 39, 39, 36, 33, 38, 37, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 19, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 33, 39, 38, 39, 36, 38, 39, 18, 37, 36, 38, 38, 39, 38, 39, 38, 38, 37, 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34, 36, 37, 32, 16, 37, 33, 34, 31, 32, 32, 34, 16, 37, 32, 32, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRDYDGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRDYDGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4264 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15220:5387 (reversed)", "sequence" : "GAATCAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTCCAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAACCTTGAGTGGATTGGAAACATTGATCCTTACTATGGTGGTACTAGCTACAGCCAGAAATTCAAGGGCAAGGCCACTTTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAAAAAGGACTACGGTAGTAGCTCGTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCTTATCCATTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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37, 33, 37, 37, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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(reversed)", "sequence" : "TTCAGAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCAAGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCGGCCTATCCCTTGTGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 38, 38, 38, 36, 34, 37, 36, 39, 39, 38, 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37, 36, 36, 36, 37, 34, 38, 38, 38, 38, 37, 32, 31, 33, 37, 37, 37, 32, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAKYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : 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"DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRNTSKNQFFLQLNSVTTEDTATYYCARIYYGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4444 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19465:5506 (reversed)", "sequence" : "AGTAGATGTAAAGCTTCAGGAGTCTGGACCTGAGCTGGTGAAGTCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTATTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCGCTGCAGCCAAAACGACACCTCCATCTGTCCATCCCCTGGCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 32, 30, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 35, 38, 38, 37, 36, 39, 39, 38, 34, 32, 36, 38, 39, 39, 15, 32, 37, 34, 38, 37, 33, 33, 15, 35, 32, 16, 17, 16, 35, 35, 38, 36, 39, 39, 38, 39, 33, 16, 37, 35, 37, 39, 37, 37, 38, 39, 37, 38, 39, 39, 39, 35, 38, 15, 32, 35, 37, 38, 38, 15, 38, 37, 39, 37, 39, 38, 16, 38, 35, 16, 16, 35, 31, 35, 17, 37, 38, 35, 15, 38, 15, 33, 37, 38, 39, 39, 37, 39, 37, 37, 33, 16, 37, 15, 34, 36, 39, 14, 14, 38, 37, 39, 39, 39, 37, 39, 36, 39, 37, 39, 38, 39, 37, 39, 39, 39, 37, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 38, 37, 16, 31, 31, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 36, 39, 37, 39, 38, 33, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 36, 37, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 38, 37, 38, 37, 37, 37, 39, 39, 38, 39, 39, 39, 37, 34, 32, 14, 38, 39, 37, 37, 33, 31, 14, 14, 14, 14, 16, 39, 38, 39, 39, 38, 38, 16, 39, 37, 38, 32, 32, 34, 38, 16, 38, 37, 33, 32, 32, 32, 14, 14, 16, 32, 15, 14, 32, 16, 16, 14, 15, 37, 37, 15, 15, 15, 38, 33, 37, 32, 36, 38, 15, 38, 38, 38, 38, 38, 38, 38, 38, 37, 16, 32, 32, 31, 32, 32, 33, 37, 32, 16, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPELVKSGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVAA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLYGNYAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPELVKSGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGISYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYCARQLYGNYAYWGQGTLVTVAA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4445 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14596:5506 (reversed)", "sequence" : "GGGCCAGGTGCAGCTGAAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCGGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTGCAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCTATCCATTGTCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 36, 36, 38, 38, 38, 38, 37, 33, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 37, 38, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 37, 37, 38, 37, 38, 39, 39, 37, 37, 37, 39, 39, 36, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 33, 39, 38, 35, 31, 27, 16, 34, 38, 38, 38, 38, 38, 37, 37, 38, 37, 39, 39, 39, 38, 38, 35, 37, 38, 39, 38, 35, 36, 38, 38, 39, 39, 37, 39, 39, 39, 38, 37, 37, 36, 38, 35, 35, 38, 38, 38, 38, 38, 38, 39, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 38, 39, 38, 37, 33, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 36, 32, 39, 38, 39, 39, 39, 38, 38, 37, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IDPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELVRSGASVRLSCTASGFNIKDYYMHWVKQRPELGLEWIGWIDPENGDIVIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYCNRGMVTTNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4447 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6297:5509 (reversed)", "sequence" : "AGTTGAGGTTCAGCTCCAGCAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTACAACTTCTGGGTTCACCTTCACTGATTACTTCATGACCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAACCTAATGGTTACACAACAGAATACAATCCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAGGCATCCTCTATCTTCAAATGAACACCCTGAGAGCGGAGGACAGTGCCATTTATTATTGTGCAAGAGATTACTCCGGCTACTTTGACTTCTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCTTGTCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 33, 37, 38, 38, 38, 34, 38, 39, 39, 39, 39, 35, 38, 38, 38, 38, 37, 35, 38, 39, 36, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 38, 38, 38, 36, 36, 39, 39, 39, 39, 37, 39, 39, 36, 34, 38, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 33, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 37, 38, 38, 39, 38, 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"AATCGAGGTGAACGTGGTGGAATCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATCAGATTGAAATCTAATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATTTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGGACAACTTAAGACCTGAAGACACTGGCATTTATTACTGTACCAGGCCCTACTATCTCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCGGCTACAACAACAGCCCCATCTGCCCATCCCCTGTGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 35, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 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"name" : "translation", "value" : "GFTFSNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYAESVKGRFTISRDDSKSSVYLQMDNLRPEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRLKSNNYAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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37, 37, 37, 37, 37, 37, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4453 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6887:5514 (reversed)", "sequence" : 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37, 33, 33, 33, 31, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYSFPVYYMHWVKQSHVKSLEWIGRINLYNGATTSNHNFKDKASLTVDKSSSTAYMELHSLTSEDSAVYYCARRVTT*LDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4330 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23476:5430 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSAKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMSSLQTDATAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGSYDVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 293, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTNYNSALMSRLSISKDNSKSQVFLKMSSLQTDATAMYYCAREGSYDVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4341 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6902:5437 (reversed)", "sequence" : "AGGCCAGGTGCAGCTGAAGCAGTCTGGGGCTGAACTGTTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGGCTTCCGGCTACACCTTCACCAGATATTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGCTTAATCCTAGCAACGGTCATACTAACTACAATGGGAAGTTCAAAAATAAGGCCACAGTGACTGTAGACAAATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACCCGTATGATTACGACGCGGGGTTTTGACTACTGGGGCCAAGGAACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTTATCCATTGTTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 37, 38, 38, 38, 32, 38, 38, 39, 38, 37, 38, 38, 38, 38, 39, 34, 39, 39, 39, 39, 39, 39, 33, 35, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 18, 37, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 38, 38, 37, 38, 39, 39, 38, 39, 39, 37, 39, 39, 38, 35, 38, 37, 38, 39, 39, 39, 34, 39, 37, 38, 39, 38, 38, 34, 36, 38, 38, 38, 39, 38, 39, 15, 38, 39, 38, 38, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 38, 30, 37, 38, 39, 39, 37, 37, 37, 35, 37, 38, 39, 16, 16, 31, 27, 35, 38, 33, 38, 39, 33, 38, 34, 34, 38, 35, 15, 34, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 26, 27, 35, 39, 22, 37, 34, 35, 34, 24, 37, 38, 35, 34, 27, 27, 25, 34, 25, 34, 38, 39, 36, 15, 25, 38, 37, 38, 23, 39, 37, 39, 33, 38, 38, 15, 22, 37, 38, 37, 38, 34, 33, 33, 37, 38, 37, 37, 37, 37, 38, 15, 38, 16, 34, 32, 38, 38, 37, 16, 35, 30, 37, 27, 37, 33, 16, 37, 16, 38, 39, 39, 34, 34, 37, 38, 37, 29, 16, 37, 37, 16, 16, 39, 39, 37, 37, 16, 34, 34, 34, 34, 35, 31, 37, 37, 18, 35, 37, 36, 30, 33, 30, 19, 19, 38, 27, 27, 14, 35, 39, 38, 35, 19, 39, 38, 30, 33, 16, 29, 29, 29, 14, 14, 36, 38, 37, 36, 16, 16, 37, 37, 39, 39, 38, 38, 38, 37, 38, 36, 30, 38, 39, 39, 37, 36, 39, 39, 39, 38, 35, 16, 38, 37, 37, 32, 37, 20, 20, 38, 39, 37, 39, 39, 38, 39, 37, 37, 37, 38, 37, 38, 39, 39, 36, 17, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 37, 38, 37, 38, 38, 19, 34, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELLKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKNKATVTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNPSNGHT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRMITTRGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.56%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELLKPGTSVKLSCKASGYTFTRYWMHWVKQRPGQGLEWIGELNPSNGHTNYNGKFKNKATVTVDKSSSTAYMQLSSLTSEDSAVYYCTRMITTRGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4342 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8273:5437 (reversed)", "sequence" : "TTTCGAAGTGATGTTGGTGGAGTCCTTGCAGCCAAACTTGACATTCGGGTCACAAACATGGGTCACGCCCTCACAGCTCTTCTCATCGCTGGAATCCATGCAGTCGGTGTCCCCGTCGCAGCGCCACCTCAGGGGGATGCACAGGCCATCTAGGCGGCACTGGAACTCATCCGAGTGGCAGCCACCAGGAGGTCTTGTAGCCTGGTTGGTACAGTTGGCGTGTGTCTCGTCGCTGTAGTCCCCACAATCATTGTCCCCATCGGTCTATCCCCTGACTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 16, 32, 32, 16, 35, 35, 38, 37, 38, 37, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 37, 39, 38, 39, 39, 37, 39, 37, 38, 39, 37, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 15, 33, 38, 39, 37, 39, 39, 39, 39, 34, 37, 37, 36, 38, 39, 39, 39, 36, 39, 37, 38, 38, 38, 39, 39, 39, 39, 36, 39, 33, 33, 37, 38, 38, 37, 38, 38, 39, 37, 39, 39, 39, 39, 38, 39, 39, 37, 37, 37, 34, 36, 36, 38, 37, 38, 38, 39, 38, 26, 34, 38, 38, 38, 38, 34, 38, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 24, 39, 38, 39, 37, 38, 38, 39, 39, 37, 39, 39, 38, 38, 38, 39, 36, 38, 39, 39, 39, 39, 38, 38, 34, 35, 38, 38, 39, 39, 38, 39, 39, 37, 38, 38, 38, 38, 38, 38, 36, 39, 39, 38, 38, 36, 38, 33, 38, 38, 33, 37, 39, 37, 39, 39, 39, 39, 38, 38, 33, 36, 37, 38, 38, 39, 39, 37, 37, 34, 36, 36, 37, 33, 37, 38, 31, 33, 33, 34, 30, 33, 37, 37, 36, 37, 36, 37, 38, 36, 37, 37, 37, 37, 37, 37, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 37, 37, 39, 38, 37, 39, 39, 37, 38, 33, 37, 17, 36, 32, 38, 39, 38, 38, 38, 38, 38, 37, 38, 37, 33, 37, 32, 33, 33, 37, 37, 37, 37, 32, 18, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 1, "max" : 48, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 111, "max" : 218, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "PRRSATSGGCTGHLGGTGTHPSGSHQEVL*PGWYSW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 49, "max" : 110, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.4343 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10671:5437 (reversed)", "sequence" : "GTAACAGGTCCAACTCCAGCAACCCATCCCCATCTGTCTATCCCTTGCAGAAGATCGGAAGAGCACCCGTCTGGACTCCAGTCACAGTTTTGTATACCGCATTACACCCTGTGCTTGAAAGAAACATGAAAAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCCAATGGTAATACTAAATATGACCCCAAGTTCCAGGGCAAGGCCACTATAACAGCAAACTCATCCTCCAACACAGCCTCCCTTCAGGTCAGCAGCCGGACATCTGAGGACACTGTCGTTTTTAATGATACGGCGACCACCGAGATCAACACTCTTTCCCTACACGACGCTCTTGCGATCTGTAACAGGTCCAACTCCAGCAACCCATCCCCATCTGTCTATCCATTGCAGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 16, 16, 16, 35, 37, 32, 37, 16, 31, 37, 16, 37, 38, 16, 16, 16, 33, 33, 38, 33, 16, 38, 15, 15, 32, 15, 33, 37, 15, 15, 32, 15, 16, 16, 37, 17, 38, 17, 32, 33, 15, 33, 16, 16, 33, 16, 32, 37, 16, 15, 16, 16, 16, 16, 14, 14, 36, 37, 38, 32, 15, 15, 16, 37, 14, 14, 32, 14, 14, 15, 32, 15, 16, 15, 33, 37, 16, 31, 37, 35, 16, 16, 35, 31, 16, 16, 17, 17, 17, 15, 15, 33, 17, 17, 17, 17, 14, 14, 14, 14, 14, 16, 16, 16, 16, 15, 14, 30, 15, 16, 33, 16, 17, 16, 29, 33, 16, 33, 16, 37, 15, 15, 15, 33, 16, 27, 27, 38, 16, 37, 38, 14, 14, 37, 37, 38, 14, 37, 37, 37, 38, 15, 37, 33, 36, 39, 39, 15, 37, 35, 15, 14, 29, 33, 38, 15, 30, 35, 35, 38, 39, 33, 36, 13, 30, 30, 38, 16, 30, 16, 16, 29, 35, 33, 39, 39, 33, 37, 33, 16, 38, 27, 16, 27, 37, 38, 36, 11, 25, 13, 13, 28, 28, 27, 33, 13, 15, 27, 13, 13, 25, 13, 13, 13, 25, 34, 13, 25, 14, 14, 13, 34, 34, 15, 34, 34, 13, 34, 33, 24, 32, 33, 34, 38, 15, 26, 37, 35, 37, 37, 33, 33, 37, 32, 36, 28, 37, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 37, 30, 14, 27, 14, 32, 27, 30, 17, 17, 17, 16, 17, 16, 16, 16, 16, 17, 31, 29, 29, 16, 37, 27, 27, 14, 27, 14, 14, 33, 16, 33, 16, 38, 33, 33, 17, 15, 15, 14, 14, 31, 30, 14, 14, 16, 14, 29, 14, 30, 14, 29, 17, 17, 16, 33, 17, 29, 17, 33, 16, 16, 39, 37, 32, 38, 33, 15, 14, 37, 31, 33, 33, 30, 14, 14, 14, 32, 14, 32, 33, 15, 32, 14, 32, 14, 37, 32, 16, 16, 16, 16, 17, 33, 39, 38, 38, 34, 34, 37, 38, 38, 37, 37, 33, 33, 15, 37, 38, 37, 15, 15, 33, 15, 15, 15, 37, 36, 15, 38, 39, 38, 38, 38, 38, 38, 38, 38, 36, 16, 38, 37, 37, 37, 33, 18, 37, 37, 32, 32, 30, 32, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "QVQLQQPIPICLSLAEDRKSTRLDS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 140, "max" : 154, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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"name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "95" }, { "name" : "Source-Identity", "value" : "67.69%" } ] } ] }, { "sequence" : { "name" : "ERR346596.4345 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14840:5437 (reversed)", "sequence" : "GGTACAGGTGCAGCTGAAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCGGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACGGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGTCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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"Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPDLVKPSQSLSLTCTVTGYSITSGYSRHWIRQFPGNKLEWMGYIHYSGTTNYNPYLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARRNGNYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4523 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14204:5557 (reversed)", "sequence" : "CATTCAGGTTCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACAGCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGTTACTAGCTACAACCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAGTCCTCCAACACTGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTTCTGTGCAAGATGGGGCTGGGACTTTGCTACGGGCTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTTATCCCTTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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37, 32, 32, 37, 33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKDKATLTVDKSSNTAYMELRSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGVT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWGWDFATGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.88%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.16%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKTSGYTFTEYSMHWVKQSHGKSLEWIGGINPNNGVTSYNQKFKDKATLTVDKSSNTAYMELRSLTSEDSAVYFCARWGWDFATGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4524 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24695:5558 (reversed)", "sequence" : "ACTGGAGGTAAAGCTTCAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCACAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTATCTGCAAATGAGTAGTCTAAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCGGTCCATCCACTGTCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 32, 37, 37, 37, 38, 38, 38, 37, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 38, 39, 39, 39, 38, 39, 38, 38, 36, 38, 16, 38, 39, 39, 37, 37, 39, 38, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 37, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 39, 38, 39, 33, 38, 39, 38, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 36, 39, 38, 38, 38, 35, 36, 39, 37, 39, 39, 39, 38, 38, 37, 37, 34, 37, 39, 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37, 37, 37, 37, 37, 37, 37, 37, 33, 37, 32, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVTT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVTTISDGGGYTYYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4525 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12699:5558 (reversed)", "sequence" : "GGGCCAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGAGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTTATCCCTGCTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 32, 32, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 37, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 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37, 37, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTRST" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ 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34, 39, 39, 39, 38, 38, 38, 37, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELLKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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32, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"GATTGAGGTGCAGCGGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCATTGTCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 35, 38, 39, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 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37, 33, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"sequence" : "TCTAGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCACCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGAGGGGGTCTACTATGGTAACCCCTACTGGTACTTCGATGTCTGGGGCACAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 34, 32, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 36, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 37, 39, 37, 37, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 37, 37, 39, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSAFMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 38, 38, 38, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 36, 38, 39, 39, 37, 38, 39, 39, 39, 38, 37, 37, 37, 37, 39, 39, 39, 39, 39, 38, 38, 34, 35, 26, 37, 39, 37, 34, 38, 34, 37, 38, 39, 34, 39, 36, 34, 36, 37, 34, 34, 37, 39, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 34, 26, 37, 37, 37, 38, 38, 39, 38, 37, 38, 38, 38, 35, 34, 36, 37, 39, 38, 37, 39, 39, 39, 37, 38, 27, 12, 27, 15, 38, 39, 39, 37, 39, 37, 36, 37, 39, 37, 39, 39, 39, 37, 35, 16, 38, 33, 30, 14, 14, 34, 34, 34, 27, 37, 38, 39, 37, 39, 38, 39, 38, 33, 39, 39, 38, 38, 34, 38, 38, 37, 39, 39, 39, 39, 39, 38, 39, 37, 38, 36, 29, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 38, 37, 18, 38, 38, 38, 39, 39, 38, 39, 38, 38, 39, 39, 39, 38, 38, 32, 37, 37, 18, 37, 39, 39, 39, 39, 39, 39, 38, 35, 37, 36, 35, 39, 39, 37, 36, 38, 36, 32, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 30, 38, 38, 36, 34, 38, 38, 38, 38, 33, 32, 35, 33, 37, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELLKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKNKATVTVDKSSSTAYMQLGSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNPSNGHT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARMITTRGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELLKPGTSVKLSCKASGYTFTRYWMHWVKQRPGQGLEWIGELNPSNGHTNYNGKFKNKATVTVDKSSSTAYMQLGSLTSEDSAVYYCARMITTRGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4415 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21631:5489 (reversed)", "sequence" : "GGGCGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCTTGTAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 24, 39, 39, 38, 39, 39, 34, 37, 39, 39, 39, 38, 39, 39, 39, 39, 24, 39, 38, 39, 39, 39, 26, 39, 39, 37, 37, 38, 24, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 34, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 36, 38, 39, 38, 39, 39, 39, 38, 38, 39, 39, 37, 39, 39, 39, 38, 38, 38, 37, 38, 38, 37, 38, 38, 37, 35, 37, 37, 38, 38, 37, 37, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 37, 38, 33, 37, 17, 34, 17, 17, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 39, 38, 36, 39, 39, 39, 37, 37, 38, 34, 39, 37, 38, 33, 19, 35, 35, 38, 38, 37, 30, 18, 33, 37, 37, 37, 37, 38, 19, 19, 18, 39, 38, 37, 39, 37, 33, 38, 39, 37, 39, 37, 38, 37, 14, 16, 38, 36, 33, 35, 19, 39, 39, 36, 16, 38, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 39, 39, 37, 38, 20, 37, 34, 38, 38, 39, 37, 36, 17, 39, 39, 39, 39, 39, 37, 37, 36, 32, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 32, 33, 33, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 155, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 180, "max" : 293, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 156, "max" : 179, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 324, "max" : 338, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "0" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 294, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLYGNYAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKEP*VDWRN*SLQWWY*LQPEVQGQGHIDCRHILQHSVHGTPQPDI*GLFGLLLCKTIVW*LRLLGPRDSVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4418 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15481:5490 (reversed)", "sequence" : "GCATGAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGCCAGTGTGTGGGGGAGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCGGAGGACACAGACAGGTATGAAGGGGAAAGGGCGGGAGAGAGGTATGGCGCTAGGGACTACGGGGGTCAAGGAACCTCAGTCAACGTCGGCGCAGAAAAAACGACAACCCCAGCTGCACATCAAGTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 33, 38, 38, 38, 38, 38, 37, 37, 38, 38, 36, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 35, 38, 38, 38, 38, 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"sequence" : "CCTAGAGGTGCACCTGGTGGAGTCTGGGGGAGGTTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAAGACACGGGGGTAGTAGAGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 36, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"ERR346596.4428 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17644:5496 (reversed)", "sequence" : "GGTAGAAGTGATGTTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAATGCCCGTGGGGATTACGACTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTTTATCCATTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 36, 37, 34, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 37, 39, 39, 37, 39, 38, 37, 38, 38, 36, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 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] } ] }, { "sequence" : { "name" : "ERR346596.4440 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12896:5505 (reversed)", "sequence" : "TCGGCAGGTCCAGCTCCAGCAGTCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAATGGATTGTATATATTTATCCTCACAATGGTGGTAATGGCTACAACCAGAAGTTCAAGAACAAGGCCACATTGACTGTAGACAGTTCCTCCAGCACAGCCTACATGGACCTCCGGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGAGGGGTACTACGGCTACGACTTACTACTTTGACTACGGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTTTATCCCTTGAGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 18, 32, 35, 33, 33, 37, 33, 37, 37, 38, 38, 38, 37, 34, 38, 38, 37, 38, 37, 39, 39, 39, 39, 39, 34, 32, 37, 38, 39, 37, 17, 38, 37, 34, 34, 34, 32, 38, 35, 37, 37, 38, 37, 17, 32, 37, 30, 32, 36, 37, 37, 18, 38, 35, 32, 32, 20, 33, 35, 37, 38, 37, 20, 38, 36, 18, 37, 37, 35, 35, 37, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 37, 39, 19, 38, 38, 37, 33, 18, 33, 38, 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32, 38, 37, 20, 33, 18, 20, 20, 20, 38, 37, 39, 37, 37, 32, 36, 37, 36, 37, 37, 39, 39, 39, 37, 35, 38, 36, 38, 37, 38, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 34, 38, 37, 32, 33, 37, 37, 37, 37, 32, 29, 18, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIVY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKNKATLTVDSSSSTAYMDLRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPHNGGN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRGTTATTYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 371, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIVYIYPHNGGNGYNQKFKNKATLTVDSSSSTAYMDLRSLTSEDSAVYYCARSRGTTATTYYFDYGGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4561 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17229:5580 (reversed)", "sequence" : "GATTCAGGTTCAGCTGCAGCAGTCTGGAGCTGAACTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAATGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCCCTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 40, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 34, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4379 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22737:5458 (reversed)", "sequence" : "ATGCGAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGAGGGTTACTACGGTAGTCCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTTCATCCATTGTTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 296, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARKDCGYSYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQ PPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYY CAHSSTYDSSGYYLIFDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQ PPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYY CAH" }, { "name" : "CDR_length", "value" : "[10.7.17]" }, { "name" : "IMGT_allele", "value" : "IGHV2-5*10" }, { "name" : "IMGT_gene", "value" : "IGHV2-5" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AF062268" }, { "name" : "Source-Mismatches", "value" : "69" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSSNQVFLKITSVDTADTATYYCARKDCGYSYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4382 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5803:5459 (reversed)", "sequence" : "NGTTGAGGTTCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGCTATGGTAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTTTATCCATTGATGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 32, 32, 16, 34, 33, 37, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 38, 16, 32, 37, 39, 38, 34, 34, 33, 32, 37, 38, 39, 37, 38, 37, 39, 34, 38, 37, 37, 37, 37, 37, 38, 36, 38, 37, 38, 38, 38, 38, 38, 39, 38, 38, 38, 39, 36, 35, 37, 38, 35, 38, 33, 37, 33, 17, 38, 39, 37, 37, 39, 39, 38, 38, 39, 38, 38, 39, 38, 38, 38, 38, 39, 33, 33, 36, 16, 37, 38, 38, 37, 39, 36, 33, 17, 38, 33, 37, 36, 39, 39, 39, 38, 39, 39, 37, 33, 37, 39, 39, 38, 39, 36, 38, 32, 16, 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37, 37, 37, 33, 37, 33, 37, 37, 35, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSYGNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKASGYSFTDYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYCGSYGNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4383 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37, 38, 38, 39, 38, 38, 34, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 37, 38, 38, 38, 37, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32, 30, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNWVRQPPGKGLEWLGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLIGYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNSGRKSRLSIR*DNSKTQVFLKMNSLQTDETARYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGDGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 334, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WSQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 333, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4485 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10598:5530 (reversed)", "sequence" : "CGGGGATGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATATATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGAGAGAAGGATTACTACGGCCACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGCCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTCTATCCCCTGGTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 19, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 32, 36, 38, 38, 38, 38, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : 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"ACACCAGGTGCAGCTGAAGCACTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAAATGTCCTGCAAGGCTTCTGGATACACATTCTCTAGTTATGTTATGGACTGGGTGAAGCAGAAGCCTGGTCAGGGCCTTGAGTGGATTGGACACATTAATCCTTCCAATGAAGATACTAAATACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTTAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGTAAGTTTGGTCTCCGACTACTGGGGCCAAGGCACCAGTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCGTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 37, 34, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 33, 38, 39, 38, 38, 34, 39, 37, 33, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 36, 37, 37, 39, 38, 39, 39, 38, 38, 38, 39, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 33, 18, 33, 37, 38, 39, 39, 39, 38, 16, 35, 38, 39, 37, 39, 39, 33, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 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"name" : "translation", "value" : "GYTFSSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTLDKSSSTAYMELSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPSNEDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GSTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDSSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGLLRFDH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGGGLVQPGGSLRLSCATSGSTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDSSQSILYLQMNTLRAEDSATYYCARDRGLLRFDHWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4492 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24681:5536 (reversed)", "sequence" : "TAATCAGGTTCAGCTCCAGCAATCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAACAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGGGTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCCCTGTGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 33, 33, 33, 37, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 33, 38, 39, 39, 39, 39, 38, 39, 39, 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38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESVAEIVKPGASVKLSCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4500 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24173:5542 (reversed)", "sequence" : 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39, 39, 39, 38, 38, 38, 39, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 39, 39, 38, 37, 38, 38, 38, 37, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 37, 38, 38, 38, 37, 34, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.57%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : 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38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPSLVKPSQTLSLTCSVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WNWIRKFPGNKLEYMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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"TATTCAGGTCCAACTCCAGCAGCCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGGCATCTGAGGACTCTGCAGTCTATTACTGTGCGATAACTGGGACGGCCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCACTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 34, 39, 39, 37, 39, 37, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 38, 39, 37, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 37, 39, 39, 39, 39, 37, 36, 32, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLASEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLASEDSAVYYCAITGTAYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4477 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13369:5527 (reversed)", "sequence" : "TGGGGAGGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCGGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAATGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTACAAGATCGGGGACATTAGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCTATCCCTTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 33, 34, 34, 32, 33, 37, 37, 38, 37, 38, 38, 38, 36, 37, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 35, 37, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 34, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 38, 37, 39, 37, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 34, 37, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 39, 38, 33, 38, 37, 37, 38, 34, 39, 36, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 38, 38, 39, 39, 39, 37, 39, 39, 38, 37, 38, 37, 39, 38, 38, 37, 37, 37, 37, 39, 39, 39, 39, 37, 37, 33, 37, 30, 36, 36, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 37, 31, 38, 37, 32, 36, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 30, 38, 38, 39, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 36, 34, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 37, 36, 36, 37, 39, 39, 37, 36, 38, 39, 38, 37, 38, 37, 38, 38, 37, 37, 39, 37, 37, 38, 36, 36, 32, 37, 32, 35, 38, 38, 38, 37, 38, 39, 38, 36, 17, 39, 39, 38, 17, 39, 39, 39, 38, 38, 37, 38, 39, 37, 37, 38, 38, 38, 38, 36, 32, 38, 37, 37, 32, 33, 33, 37, 37, 37, 32, 33, 33, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSGKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTMKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRSGTLGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSGKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTMKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCTRSGTLGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4478 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12351:5527 (reversed)", "sequence" : "ATTAGATGTGCAGCTTCAGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGGGTTTGGCATGTCTTGGGTTCGCCAGAGTCCAGACAAGAGGCTGGAGTGGGTTGCAACCATTGGTGTTGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCGAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACCCTTTACTACGGTAGTAGCTACGGTGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 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39, 38, 38, 38, 34, 36, 32, 34, 38, 34, 37, 32, 31, 33, 33, 33, 35, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQSPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSGFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLRMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGVGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARPFTTVVATVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.52%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGDLVKPGGSLKLSCAASGFTFSGFGMSWVRQSPDKRLEWVATIGVGGTYTYYPDSVKGRFTISRDNAKNTLYLRMSSLKSEDTAMYYCARPFTTVVATVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4479 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14126:5528 (reversed)", "sequence" : "CTTGCAGGTGCAGCTGAAGCAGTCTGGGACTGTGCTGGCAAGGCCAGGGGCTTCATTGAGGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCCGGAAATAATGATGCCAGATACACCCAGAAGTTCAAGGCCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCGACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTGCAAGAAACTGGGACTGGGTGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGCCCATCCCCTGGGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 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"QVQLQQSGAELVKPVASVKLSCTTSGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTKYDPEFQGKATITADTSSNTAYLHLSSLTSEDTAVYSCAHDAPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4613 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25538:5615 (reversed)", "sequence" : "TTTACGAATTAAGTCGAAGTGGTCTGCTGGCGGAATGTGAGAACATTCGACCTATCCTTGCGCAACTCGAGAGACTCTTACTTTGCGACCTTTCGCCTTCAACTAACGCTTCTGTCAACAACTGACGCGTTGGATGAGGAGAAGTGGCGTAATATGCTTGGCTGGTTCGTCAAGGACTGGTTGAGATATGAGTCACATTTTGGTCAGGGTAGAGAGGCTCTTGTTGACATTTTAAAAGAGAGTGGATTACTATCTGAGGACGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTCGGCCTCTATTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 16, 16, 16, 16, 16, 29, 32, 31, 35, 16, 33, 18, 32, 16, 32, 37, 15, 16, 33, 16, 33, 38, 37, 16, 18, 38, 36, 15, 32, 15, 14, 14, 14, 16, 33, 17, 35, 16, 37, 16, 16, 15, 33, 16, 16, 37, 17, 37, 36, 36, 16, 33, 16, 15, 32, 32, 16, 16, 14, 14, 14, 14, 29, 15, 16, 33, 14, 14, 30, 14, 14, 33, 37, 31, 16, 37, 16, 16, 16, 37, 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"max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGNIYPGSGSTNYDEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRGGVYYAYDGAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4615 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20206:5617 (reversed)", "sequence" : "GCGGGAGGTGAAGCTGATGGAATCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGAAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTCATCCCCTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 31, 33, 33, 33, 33, 33, 33, 33, 33, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, 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"ATCTGATGTGCAGCTTCAGGAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACGTTCACCAGCTACTGGATGAACTGGGTTAAGCAGAGGCCTGAGCAAGGCCTTGAGTGGATTGGAGGGATTGATCCTTACGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCATATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGACGCACGAATTATGATGGTTACTACGTCCCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCCCCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCTATCCCCTGAGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNQKFKDKAILTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYDSET" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, 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32, 32, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"CGTTGAGGTGAAGGTGGTGGAATCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTATATATACTGGGTGAAGCAGAGGCCTGGACAAGGCCCTGAGTGGATTGGAGAGATTAATCCTACCAATGGTGATAATAACTTCATTGAGAAGTTCAAGAACAGGGCCACACTGACCGTAGACAAATCCTCCAGCACAGCAAACATTCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGACGCAAGTGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCTCATCCCCTGCTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 32, 32, 37, 37, 37, 33, 37, 37, 38, 34, 38, 38, 36, 36, 37, 36, 38, 38, 39, 39, 39, 38, 38, 38, 34, 37, 36, 36, 32, 38, 39, 39, 37, 34, 33, 34, 32, 35, 35, 38, 39, 18, 37, 38, 37, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 37, 36, 39, 39, 39, 39, 39, 37, 38, 34, 38, 36, 39, 36, 38, 39, 39, 39, 39, 38, 38, 39, 18, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 39, 36, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 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33, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWVKQRPGQGPEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFIEKFKNRATLTVDKSSSTANIQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPTNGDN" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRKWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", 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"ACTAGAGGTTCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTGCAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCTATCCACTGCGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 33, 37, 37, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 37, 39, 39, 34, 38, 38, 38, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 39, 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32, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IDPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "28" }, { "name" : "Source-Identity", "value" : "90.48%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRSGASVRLSCTASGFNIKDYYMHWVKQRPELGLEWIGWIDPENGDIVIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYCNRGMVTTNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4627 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17700:5622 (reversed)", "sequence" : "GCGAGAGGTACAGCTTCAGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACGCATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGATCTACTATGATTACGACGGAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTTCATCCCCTGTGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 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false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 37, 38, 39, 38, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 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"EVQLQQSGPELVKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKDKATLTVDKSSNTAYMELRSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGVT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCKTSGYTFTEYSMHWVKQSHGKSLEWIGGINPNNGVTSYNQKFKDKATLTVDKSSNTAYMELRSLTSEDSAVYFCARWGWDFATGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4541 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16315:5566 (reversed)", "sequence" : "CCGGGAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAACAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACTATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGAGGGGGTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCTATCCCTTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 35, 35, 35, 35, 35, 34, 35, 34, 35, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 16, 37, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 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"EVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYYDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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}, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYYDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAREGVDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4542 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21747:5566 (reversed)", "sequence" : "CCTGGAGGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGTCCATCCCTTGCTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 32, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIKPYYSWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF PGNKLEWMGYMSYSGSTRYNPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-2" }, { "name" : "Videntity", "value" : "96,93% (284/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19894; J03832" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.54%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYISYSGSTGYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAIKPYYSWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4553 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9106:5572 (reversed)", "sequence" : "GAGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGATCCGATCTACTATGATTACGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCACTGAGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 34, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 37, 36, 38, 39, 20, 37, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 39, 37, 38, 36, 37, 38, 38, 38, 38, 38, 39, 39, 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37, 38, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 36, 37, 39, 39, 36, 39, 35, 36, 38, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 38, 32, 36, 35, 38, 39, 36, 37, 38, 39, 38, 38, 39, 39, 36, 17, 38, 38, 38, 37, 38, 39, 38, 37, 38, 38, 37, 39, 37, 38, 38, 37, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDPIYYDYDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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38, 38, 38, 38, 38, 38, 20, 37, 33, 37, 37, 37, 33, 37, 32, 32, 32, 29, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNKFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWVAQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSSTAYMQLSSLTPEDSAIYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INCGGGYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 311, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : 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39, 37, 38, 38, 38, 38, 38, 33, 19, 17, 34, 37, 37, 33, 37, 37, 37, 37, 33, 33, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"GGGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGGGGAATCACATACTATAATTCAAATCTCAAATCCAGACTGAGCATCAGCAAGGACAGCTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCAGGTACTACTGGGCCAAACATGATACTACGGGTGTAGTCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTTCATCCATTGTCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 32, 35, 37, 16, 34, 37, 38, 38, 38, 37, 16, 38, 38, 33, 37, 38, 39, 39, 38, 36, 38, 39, 39, 39, 38, 39, 39, 32, 38, 39, 38, 39, 39, 34, 36, 37, 36, 34, 36, 38, 38, 38, 38, 36, 32, 16, 32, 32, 33, 33, 37, 39, 39, 33, 38, 17, 37, 37, 32, 33, 16, 35, 33, 37, 37, 38, 37, 15, 35, 33, 17, 35, 17, 37, 39, 39, 39, 38, 39, 37, 39, 33, 38, 39, 37, 38, 38, 39, 36, 38, 38, 36, 31, 36, 38, 39, 35, 37, 37, 16, 37, 29, 36, 38, 39, 39, 37, 38, 36, 16, 37, 27, 36, 36, 38, 38, 38, 39, 39, 39, 15, 37, 38, 36, 37, 39, 39, 39, 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33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VSWIRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNSNLKSRLSISKDSSKSQVFLKMNSLQTDDTARYYW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGIT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKHDTTGVVDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.81%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YSDYW" }, { "name" : "translation", "value" : "YSDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "and IGHJ2*03 may be also solution" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGITYYNSNLKSRLSISKDSSKSQVFLKMNSLQTDDTARYYWAKHDTTGVVDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4562 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20761:5580 (reversed)", "sequence" : "TCGCCAGGTGCAGCTGAAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTTCATGGAACTCCACAGCCTGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTTCATCCATTGACTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 38, 34, 38, 39, 39, 39, 32, 17, 38, 39, 20, 37, 39, 39, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 32, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 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37, 35, 37, 32, 18, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLYGNYAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPELVKPGPSVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGEINPYNGGTSYNQKFKGKATLTVDTSSSTAFMELHSLTSEDSLVYYCARQLYGNYAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4563 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9827:5581 (reversed)", "sequence" : "TCCCCAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTGGCTACTGGATGCAGTGGGTTAAACAGAGGCCTGGCCAGGGTCTGGAATGGATTGGGATTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCGTCCAGCACAGCCTACATGCAACTCAGGAACTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGTTTTCTACGATAGTACCTCTGCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 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"QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { 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"ERR346596.4588 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17768:5600 (reversed)", "sequence" : "CTCAGAGGTGCAGGGGGTGGAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATAACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGTGTGATATGGAGAGGTGGAAGCACAGACTACAATGCAGCTTTCATGTCCAGACTGAGCATCACCAAGGACAACTCCAGGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACTGCCATATACTACTGTGCCAAAGGGACTGGGAACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCTATCCACTGGCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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"value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.81%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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38, 37, 36, 34, 29, 32, 33, 33, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSRYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLHMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQYGNLGVMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" 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32, 32, 35, 35, 32, 33, 35, 32, 32, 30, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRHEQSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDNS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYMQLSILASGGLAFDYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPENGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYCGSRYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.84%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTASGFNIKDNSMHWVKQRHEQSLEWIGRIDPENGNTKYDPKFQGKATITADTSSNTAYMQLSILASGGLAFDYCASYYCGSRYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4598 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10375:5609 (reversed)", "sequence" : "ATCGAAGTGAAGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCTTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATAAAAACTATGGTAGCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGCCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCATTGATGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 33, 33, 37, 37, 37, 37, 38, 37, 38, 38, 32, 37, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 37, 39, 39, 39, 39, 38, 31, 37, 38, 38, 38, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 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"TCATCAGGTCCAGCTCCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGAGCATGCTATGCACTGGGTGAGGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGACTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGACGATTCTGCCATCTACTACTGTGGAAGATCCATTCATTACTACGGCTACGATGTTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCCTTGAGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 35, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 37, 37, 38, 39, 39, 39, 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39, 38, 38, 38, 37, 38, 37, 37, 37, 36, 32, 34, 19, 33, 37, 37, 37, 37, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQSHAKSLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEHA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSDDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GRSIHYYGYDVMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "54" }, { "name" : "Source-Identity", "value" : "81.63%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGVSVKISCKGSGYTFTEHAMHWVRQSHAKSLEWIGLISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSDDSAIYYCGRSIHYYGYDVMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4722 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15311:5685 (reversed)", "sequence" : "TTTTCAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCTTTCAATAGTTCTTGGATGAACTGGGTGAAACAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTTTCCTGGAGATGGAGATACTAACTACGATGGGAAGTTCAGGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAGATTGGGATACAGTGGCTACTGGGGCCAAGGCACCGCTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCACTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 37, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 34, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 27, 37, 33, 38, 38, 36, 37, 38, 37, 37, 38, 37, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 34, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 39, 38, 37, 37, 34, 37, 37, 38, 39, 39, 38, 38, 39, 38, 39, 38, 37, 37, 37, 37, 37, 38, 37, 38, 33, 38, 30, 33, 16, 30, 39, 37, 38, 39, 38, 37, 31, 33, 39, 39, 37, 33, 34, 31, 16, 38, 33, 39, 38, 38, 37, 31, 34, 14, 38, 38, 39, 39, 37, 16, 33, 38, 38, 37, 39, 38, 33, 38, 37, 39, 36, 39, 39, 39, 37, 15, 37, 39, 39, 39, 39, 39, 39, 34, 39, 38, 38, 35, 37, 16, 37, 39, 38, 37, 38, 36, 38, 38, 33, 37, 39, 39, 37, 36, 34, 37, 30, 36, 32, 37, 35, 38, 33, 16, 39, 38, 39, 37, 37, 32, 16, 14, 15, 15, 37, 38, 37, 14, 15, 39, 39, 39, 39, 39, 37, 36, 32, 38, 34, 36, 38, 33, 35, 38, 37, 36, 38, 38, 32, 16, 32, 34, 35, 16, 37, 37, 34, 29, 32, 32, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFNSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDGKFRGKATLTADKSSNTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IFPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTALTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLGYSGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "84.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DIVA" }, { "name" : "IMGT_allele", "value" : "IGHD5-12*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-12" }, { "name" : "Source-Sequence", "value" : "AF062144" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKASGYAFNSSWMNWVKQRPGQGLEWIGRIFPGDGDTNYDGKFRGKATLTADKSSNTAYMQLSSLTSVDSAVYFCARLGYSGYWGQGTALTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4723 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13908:5685 (reversed)", "sequence" : "GTTAGAGGTGAAGCTGATGGAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAGCTACAGTGGTAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAGATGATTACGGAGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCATTGGAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 37, 39, 36, 37, 39, 39, 37, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 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33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDDYGV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF PGNKLEWMGYMSYSGSTRYNPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-2" }, { "name" : "Videntity", "value" : "96,93% (284/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19894; J03832" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "VWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYISYSGSTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARDDYGVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4724 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21847:5686 (reversed)", "sequence" : "CAGACAGGTCCAACTGCAGCAGCCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGTCTATCCATTGTGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4725 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16882:5687 (reversed)", "sequence" : "AGGAGACGTGATGTTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAATTTACTACGGTAGTAGCTACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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38, 39, 38, 38, 39, 38, 39, 39, 38, 38, 38, 38, 37, 37, 38, 39, 37, 37, 36, 37, 34, 39, 37, 38, 38, 36, 38, 38, 38, 38, 38, 36, 33, 33, 33, 33, 35, 35, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARIYYGSSYDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARIYYGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4727 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11040:5688 (reversed)", "sequence" : "TCTGGAGGTGAAGCTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATCCATTAGTAGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGATAATGCCAGGAACATCCTGTACCTGCAAATGAGCAAGCTGGGGTCTGAGGACACGGCCATGTATTACTGTGCAAGAGAGGTGGATGGTTGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCTATCCCCTGTGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 38, 37, 38, 36, 36, 36, 36, 39, 38, 39, 38, 38, 39, 39, 39, 38, 38, 35, 39, 37, 36, 38, 38, 37, 37, 37, 37, 38, 39, 36, 37, 39, 39, 39, 39, 37, 38, 39, 39, 39, 36, 37, 39, 38, 37, 37, 37, 37, 37, 38, 39, 35, 38, 38, 35, 38, 38, 38, 38, 38, 38, 37, 37, 38, 38, 26, 37, 38, 23, 22, 21, 36, 37, 37, 38, 38, 37, 24, 26, 38, 38, 37, 28, 16, 37, 30, 37, 34, 37, 38, 37, 37, 37, 33, 33, 37, 37, 37, 37, 33, 37, 37, 37, 37, 16, 14, 31, 16, 16, 27, 14, 14, 14, 14, 14, 37, 33, 16, 30, 30, 17, 16, 33, 33, 14, 14, 14, 18, 38, 33, 38, 33, 33, 19, 33, 19, 19, 33, 18, 36, 33, 33, 18, 18, 18, 38, 33, 18, 18, 37, 15, 34, 38, 33, 16, 33, 18, 37, 16, 38, 39, 39, 38, 38, 33, 19, 35, 35, 31, 37, 37, 37, 33, 19, 37, 33, 18, 18, 30, 35, 34, 39, 38, 37, 18, 39, 37, 37, 18, 37, 34, 37, 32, 33, 18, 34, 37, 20, 20, 20, 18, 38, 18, 34, 16, 32, 18, 37, 37, 16, 16, 37, 32, 17, 34, 39, 39, 39, 39, 39, 37, 39, 36, 30, 35, 30, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 37, 32, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQMSKLGSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREVDGWYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TNRHWGNYGMDVWGQGTTVIVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "TN" }, { "name" : "IMGT_allele", "value" : "IGHD2-8*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-8" }, { "name" : "Source-Sequence", "value" : "AF417847" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVASISSGGSTYYPDSVKGRFTISRDNARNILYLQMSKLGSEDTAMYYCAREVDGWYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4729 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6942:5691 (reversed)", "sequence" : "CCTTGACGTGATGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTACAACTTCTGGGTTCACCTTCACTGATTACTTCATGACCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAACCTAATGGTTACACAACAGAATACAATCCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAGGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCATTTATTATTGTGCAAGAGATTACTCCGGCTACTTTGACTTCTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 34, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 39, 39, 37, 39, 38, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 37, 39, 39, 39, 39, 35, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 37, 39, 37, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 34, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 37, 38, 37, 39, 39, 37, 39, 37, 37, 39, 37, 39, 39, 39, 37, 38, 38, 37, 16, 33, 36, 39, 37, 39, 37, 38, 35, 37, 31, 39, 39, 39, 39, 39, 39, 39, 33, 39, 37, 17, 39, 39, 38, 30, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 36, 37, 36, 38, 38, 39, 39, 38, 39, 39, 37, 39, 39, 37, 39, 38, 37, 18, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 37, 39, 39, 39, 37, 38, 38, 37, 39, 39, 37, 39, 36, 37, 38, 38, 37, 38, 39, 39, 38, 37, 39, 38, 39, 39, 39, 38, 38, 37, 36, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 33, 33, 33, 33, 33, 32, 34, 33, 33, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCTTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNPSVKGRFTISRDNSQGILYLQMNTLRAEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKPNGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYSGYFDF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.76%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGGGLVQPGGSLRLSCTTSGFTFTDYFMTWVRQPPGKALEWLGFIRNKPNGYTTEYNPSVKGRFTISRDNSQGILYLQMNTLRAEDSAIYYCARDYSGYFDFWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4730 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18069:5692 (reversed)", "sequence" : "AGCTGAGGTGCAGCTGCAGCAGTCTGGAGCTGAGCTGGCGAGGCCCGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAGATCAGGTGATGGTTACCCCAGGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCCTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 35, 35, 35, 37, 37, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMGHYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062177" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "78.57%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKLSCKASGYTFTDYYINWVKQRTGQGLEWIGEIYPGSGNTYYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARSGDGYPRDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4731 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13204:5693 (reversed)", 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LAARLP" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "MV" }, { "name" : "IMGT_allele", "value" : "IGHD5-18*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-18" }, { "name" : "Source-Sequence", "value" : "L29121" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGALVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADRSSSTAYMQLSSLTSENSAVYFCARSDDGFPYSFDSWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4506 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"TGTAGAAGTGAAGTTGGTGGAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCTCTGGCTACAACTTGAACTGGGTGAAGCAGAGCAATGGACAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGATACTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAGATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAAGACTCTGCAGTCTATTACTGTGCAAGAAAGGCCTACTATACTAACTGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCCTTGATTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 36, 38, 37, 38, 38, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 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39, 38, 34, 37, 36, 38, 38, 38, 37, 38, 38, 37, 33, 33, 37, 37, 33, 37, 33, 32, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNWVKQSNGQSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFSGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDRSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSAYYGSMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGALVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDNYGVAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARDNYGVAYWGQGALVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4515 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24014:5551 (reversed)", "sequence" : "TCGACAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGCCTATCCCTTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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"translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"ERR346596.4516 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19015:5552 (reversed)", "sequence" : "GCGGGAGGTGAAGCTGATGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGACTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAGGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGCCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCTTATCCCCTGATGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 35, 33, 32, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 37, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 37, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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37, 38, 39, 38, 38, 38, 37, 36, 39, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNERFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TNSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTSATVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVTNSGSGGTKYNERFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARAITDAMDYWGQGTSATVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4517 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21637:5553 (reversed)", "sequence" : "GCTAGAGGTCCAACTGCAACAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCCATCCACTGTGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 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39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 38, 35, 35, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 33, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 38, 36, 32, 38, 38, 36, 37, 38, 38, 38, 38, 38, 38, 37, 36, 38, 38, 38, 37, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4518 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20864:5553 (reversed)", "sequence" : "CGGCGAGGTCCAGCTGCAACAGTCTATCCCCTGCGTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATATCGTATGCCGTCTTCTGCTTGAAAAAAAAAAATCCGGCAGTTTCCAGGAAACAAACTGGAATGTATGGGCTACATACAATACAGTGGTAGCACTAACTACAACCCATCTCTCAAAATTCGCATCTCTATCACTCGAGACACAGACAAGAAGCAGTTCTTCCTGCAGTTGAATTGTGTGACGTCTGAGGACACAGCCACATATTACTGTGCAATTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCGGCGAGGTCCAGCTGCAACAGTCTATCCCCTGCGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 32, 32, 32, 35, 35, 35, 16, 16, 33, 37, 36, 15, 32, 16, 33, 33, 33, 16, 33, 32, 33, 37, 35, 37, 37, 38, 15, 32, 36, 32, 15, 32, 36, 32, 36, 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16, 30, 16, 16, 16, 16, 15, 14, 27, 14, 37, 30, 38, 38, 19, 36, 35, 19, 39, 37, 36, 15, 14, 27, 27, 14, 29, 29, 37, 14, 30, 36, 30, 37, 16, 19, 19, 31, 36, 39, 37, 37, 38, 38, 33, 37, 37, 36, 34, 32, 34, 36, 36, 38, 37, 37, 37, 36, 36, 36, 32, 34, 39, 39, 36, 38, 38, 38, 36, 36, 36, 37, 36, 36, 17, 17, 38, 34, 37, 33, 39, 38, 37, 32, 39, 39, 39, 39, 38, 35, 33, 37, 38, 37, 38, 38, 38, 37, 34, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 1, "max" : 65, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 105, "max" : 155, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KKKIRQFPGNKLECMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 66, "max" : 104, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SHSSVYRMPSSA*" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 177, "max" : 290, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKIRISITRDTDKKQFFLQLNCVTSEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 156, "max" : 176, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQYSGST" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 3, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "95" }, { "name" : "Source-Identity", "value" : "67.58%" } ] } ] }, { "sequence" : { "name" : "ERR346596.4519 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7780:5555 (reversed)", "sequence" : "TGGTCAGGTTCAACTGCAGCAGCCACATCTGTCCATCCACTGCGCGAGATCGGACGAGCACACCTCTGACCTCCAGTCACAGTTCCGTATATCGTATTCTGTCTTATGCTTGGATCGCAAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGAGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTTATTACACAGTCTTGTTCTTAATGACACGGCGACCACCGAGATCTACACACGTCCCCGACACGACGCTCTTCCGATCTGGGTCAGGTGCAACTGCAGCAGCCCCATCTGTCCATCCACTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 16, 35, 37, 37, 37, 37, 37, 37, 18, 38, 38, 37, 38, 38, 38, 37, 38, 37, 37, 39, 15, 32, 15, 16, 33, 32, 32, 35, 18, 37, 18, 37, 16, 33, 32, 16, 16, 33, 16, 15, 36, 36, 14, 14, 32, 14, 16, 33, 14, 14, 14, 14, 14, 32, 14, 14, 33, 38, 15, 14, 15, 37, 37, 16, 16, 16, 15, 16, 16, 14, 15, 16, 33, 38, 16, 16, 16, 33, 38, 38, 17, 17, 14, 16, 15, 33, 33, 17, 38, 14, 15, 15, 29, 16, 29, 17, 33, 17, 17, 17, 33, 29, 17, 16, 33, 37, 17, 33, 14, 16, 16, 33, 14, 14, 14, 30, 27, 37, 37, 37, 38, 39, 39, 38, 33, 14, 37, 37, 38, 37, 34, 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29, 16, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPHLSIHCARSDEHTSDLQS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LCLDRKPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "QFRISYSV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : 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"QVQLQQSGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWLGYISYDGSNHYNPSLTNRVSITRDTSKNQFFLKLNSVTTEDTATYYCASVEVHAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4690 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24395:5663 (reversed)", "sequence" : "TTCTTAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAATATTTATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGACAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACGACTGGGACGAGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTCCATCCATTGAGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 38, 39, 38, 38, 35, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 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39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 37, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "*VQLQQPGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSDSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TTGTRFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 296, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "*VQLQQPGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTTGTRFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4692 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34, 37, 38, 33, 30, 37, 39, 39, 39, 39, 37, 14, 36, 36, 36, 36, 38, 38, 38, 38, 37, 15, 38, 33, 33, 16, 16, 16, 32, 32, 35, 32, 32, 30, 37, 32, 29, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSPGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYKQKFKGQTILTVDKSYSTAYLELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSPGKSLEWIGRVNPNNGGTSYKQKFKGQTILTVDKSYSTAYLELRSLTSEDSAVYYCAREDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4693 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16098:5664 (reversed)", "sequence" : "GATCCAGGTCAAGCTCCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTGACTACTACATGAAGTGGGTGGAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACACGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGGCTAACTGGGACCAACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCATTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 39, 36, 36, 36, 32, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVKLQQSGPDLVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVEQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGLTGTN" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.30%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 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"ERR346596.4694 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11607:5665 (reversed)", "sequence" : "GCCCGAGGTAAAGCTTCAGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGATGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACTGTAGACAAATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTCTCCCCTGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 37, 38, 33, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGNPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVKPGASVKLSCKASGYTFTSYWMHWMKQRPGQGLEWIGEINPSNGRTNYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSCAGGNPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4695 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21439:5666 (reversed)", "sequence" : "GGGGGAGGTCCAGCTGCAACAGTCCTCCCCTCCTGCCCACCTCTGTGTGTACACTTGTGCTCTATAAGCTTGGACTCATCTTAAGGGAACATGAGAGATCTTCCGTCTGAAAATCATAACTCATGCTATATTGATGAATGCGTTGTTGCGTACCTGTGGTTGTGTACTCAAATTCCTAAATAAGCCTTTGTCTGTGCCATGCTTGTTTTGAAATACTCTTGTGAAATTACTCCTGTTCTCTTGCCACTCTGCTATTCGGGCGTTGAAAGTTGATTTCAGGACGTAATGGGGAGATTGCCTCTCCGACTTGCCTGTTTTATTTTGGGGTATTTTGTCTTACCAACCGGTTTGTCCCAACTCCCCATCTGCTCATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 33, 34, 33, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 37, 39, 38, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 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"QVQLQQSGDDLVKPGASVKLSCQASGYSFTRYWIKWIKKRPGQGLEWIGRIAPGSDITYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARFPFYYGSSFYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4701 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8012:5669 (reversed)", "sequence" : "TTACGAAGTGATGTTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAATAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGGACAAGACGGGGGAGGTACGACGAAAGGAGTGATATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTCTATCAACTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 36, 37, 38, 38, 34, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 37, 39, 39, 39, 39, 39, 37, 38, 36, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 37, 32, 38, 39, 38, 37, 35, 20, 38, 37, 38, 37, 39, 39, 39, 38, 37, 36, 35, 36, 34, 37, 38, 37, 38, 37, 37, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGRYDERSDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAASGFTFSTYGMSWVRQTPDKRLEWVATINSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYWTRRGRYDERSDMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4703 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20944:5669 (reversed)", "sequence" : "TCAGGAAGTGAAGGTTGAGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCTTGAAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 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39, 38, 36, 36, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 38, 39, 39, 36, 17, 38, 38, 38, 37, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", 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"type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : 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"CGGCGAGGTGAACGTGGTGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTCATCCACTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 34, 34, 32, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 32, 37, 38, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 34, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSVLVRPGASVKLSCKASGYTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTNYNEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCANYYGSSSYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4715 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5760:5677 (reversed)", "sequence" : "TTTCGAGGTGCAGGTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCAGTGATTTCTACATGGAGTGGGTCCGCCAGCCTCCAGGGAAGAGACTGGAGTGGATTGTTGCAAGTAGAAACAAAGCTAATGATTATACAACAGAGTACAGTGCATCTGTGAGGGGTCGGTTCATCGTCTCCAGAGACATTTCCCAAAGCATCCTCTACTTTTTTGTGAATGTGCTGAGAGCTGAGGACACTGCCATTTATTATTGTGCAAGAGGTACGGTAGATAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCTTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 31, 37, 33, 33, 33, 37, 33, 38, 38, 37, 38, 38, 38, 38, 38, 19, 37, 38, 38, 38, 38, 39, 20, 38, 38, 35, 37, 37, 38, 38, 39, 38, 37, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 36, 38, 39, 37, 39, 39, 39, 39, 37, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 39, 37, 39, 39, 39, 39, 39, 38, 38, 33, 37, 37, 38, 39, 39, 33, 38, 39, 39, 18, 33, 38, 39, 37, 38, 35, 37, 19, 37, 38, 39, 18, 37, 38, 39, 38, 38, 38, 39, 38, 37, 36, 38, 34, 34, 37, 37, 38, 39, 37, 17, 37, 37, 38, 30, 15, 30, 31, 31, 27, 38, 37, 38, 39, 27, 37, 38, 39, 38, 30, 38, 37, 39, 39, 39, 39, 39, 38, 16, 37, 37, 29, 38, 37, 37, 37, 37, 37, 37, 39, 37, 34, 35, 37, 33, 28, 38, 28, 35, 35, 33, 35, 37, 36, 36, 37, 39, 37, 39, 37, 34, 38, 39, 39, 37, 39, 39, 39, 38, 38, 38, 37, 37, 39, 39, 39, 36, 39, 39, 38, 32, 35, 35, 38, 38, 38, 38, 38, 36, 37, 33, 37, 38, 38, 36, 39, 39, 39, 38, 39, 39, 39, 39, 38, 36, 39, 37, 37, 37, 39, 39, 38, 28, 27, 33, 27, 33, 37, 37, 22, 22, 37, 15, 21, 10, 13, 15, 15, 16, 16, 16, 16, 16, 30, 30, 15, 15, 16, 16, 37, 33, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 32, 30, 38, 16, 37, 33, 33, 17, 33, 38, 39, 38, 37, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 37, 35, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 37, 37, 37, 30, 18, 37, 37, 38, 37, 36, 37, 30, 38, 34, 38, 38, 38, 38, 39, 38, 37, 37, 38, 38, 39, 38, 39, 38, 38, 39, 36, 37, 38, 38, 38, 36, 37, 16, 36, 32, 37, 37, 33, 38, 39, 37, 36, 32, 39, 39, 39, 39, 38, 39, 39, 38, 36, 38, 38, 38, 37, 38, 37, 19, 38, 38, 38, 38, 34, 37, 34, 19, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MEWVRQPPGKRLEWIVA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVRGRFIVSRDISQSILYFFVNVLRAEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRNKANDYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGTVDNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGFTFSDFYMEWVRQPP GKRLEWIAASRNKANDYTTEYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-1" }, { "name" : "Videntity", "value" : "100,00% (303/303 nt)" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGRPYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YG" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "S76835" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATSGFTFSDFYMEWVRQPPGKRLEWIVASRNKANDYTTEYSASVRGRFIVSRDISQSILYFFVNVLRAEDTAIYYCARGTVDNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4665 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13996:5643 (reversed)", "sequence" : "GGCGGAAGTGAAGGTTGAGGAGTCCGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAAGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCATTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 38, 39, 37, 34, 33, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 37, 39, 38, 39, 39, 39, 37, 37, 39, 38, 37, 38, 34, 36, 38, 33, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 38, 38, 34, 37, 32, 39, 38, 37, 33, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 37, 30, 39, 38, 38, 39, 37, 38, 38, 38, 37, 39, 36, 14, 14, 36, 34, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 37, 39, 39, 38, 37, 38, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 38, 39, 39, 39, 37, 39, 34, 38, 37, 38, 37, 17, 17, 39, 39, 39, 38, 39, 38, 38, 37, 36, 38, 34, 38, 37, 33, 37, 19, 38, 38, 38, 38, 34, 38, 37, 37, 37, 37, 37, 32, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IPPGSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQRTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ARGSYYYGSSSPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGDDLVKPGASVKLSCKASGYTFTSYWINWIKQRPGQGLEWIGRIPPGSGTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARGSYYYGSSSPWFAYWGQRTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4666 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14215:5643 (reversed)", "sequence" : "GTTGCAGGTCCAACTACAGCAACCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGTCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 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38, 38, 38, 33, 33, 33, 33, 33, 35, 33, 32, 31, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4667 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10980:5644 (reversed)", "sequence" : "AACAGAGGTCCAGCTTCAGCAGTCTGACGCTGAGTTGGTGAAACCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACCATGCTATTCACTGGGTGAAGCAGAAGCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTGATATTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTAAAAGATCTGATGGTAACTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 32, 32, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSDAELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQKPEQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDHA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISPGNGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KRSDGNYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQKPEQGLEWIGYISPGNGDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSDGNYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4668 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20328:5646 (reversed)", "sequence" : "ACGCGAGGTGAAGCTGATGGAATCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTACCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTAATGACACAGCCATATATTACTGTGCCAGAAACCACAGGGGCTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGACTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 33, 33, 34, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 20, 32, 33, 33, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 33, 37, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 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"value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ 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}, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPGNNDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWDWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP 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"sequence" : { "name" : "ERR346596.4674 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10626:5654 (reversed)", "sequence" : "GCTTGAGGTGCAGCGGGTGCAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACGCATTTAGTAGCTACTGGATAGAGTGGGTAAATCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTAACCTGGAAGTGGTACTACTCACTACAATGAGAAGTTCAAGGACAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGGGGGATATGATACCTCCATTTTTGCTTACTGGGGCCAAGGGACTTTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGTTTATCCCTTGGGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 16, 29, 34, 37, 37, 37, 16, 34, 37, 38, 38, 32, 16, 15, 15, 32, 15, 33, 33, 38, 39, 39, 38, 39, 16, 15, 37, 39, 39, 16, 16, 38, 39, 39, 16, 17, 16, 35, 32, 37, 39, 39, 39, 39, 39, 38, 38, 38, 14, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 16, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 14, 36, 14, 36, 38, 39, 39, 17, 33, 37, 38, 39, 39, 39, 39, 33, 39, 39, 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34, 38, 38, 37, 37, 33, 33, 33, 33, 33, 37, 37, 32, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSISCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALISRLSIRKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : 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37, 38, 37, 32, 32, 33, 32, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWMMQKAGEGLEGIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNETFKGKATLTSDKSSSTAYMDLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWMMQKAGEGLEGIGYINPYNDGTKYNETFKGKATLTSDKSSSTAYMDLSSLTSEDSAVYFCARSEYFGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4815 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"CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKASCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARAITDAMDYWGQGTSVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4817 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5587:5737 (reversed)", "sequence" : "GATCCAGGTTCAGCTCCAGCAATCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTGTTGGTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCATCTCAGCAAAAACGACTCCCCTGTCTGTTTTTTTTTTTTTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 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104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMCWC" } ] }, { "name" : "CDR2", "type" : "CDR", 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"IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.56%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 37, 36, 36, 37, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 37, 36, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 37, 37, 39, 39, 39, 36, 32, 38, 36, 38, 38, 38, 38, 35, 39, 34, 37, 33, 38, 39, 37, 36, 16, 39, 39, 39, 37, 39, 37, 38, 37, 36, 38, 37, 39, 38, 37, 38, 37, 38, 38, 38, 37, 37, 34, 33, 30, 33, 33, 33, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGLLRFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { 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"value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDRGLLRFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4819 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6723:5737 (reversed)", "sequence" : "TCCCGAGGTCCAGCTTCAGCAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATATTACTACGGTAGTAGCTACGAGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCACTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 32, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 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"EVQLVESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARLYYGNTYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4633 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13437:5623 (reversed)", "sequence" : "CACAGACGTGATGTTGGTGGAGTCAGGACCTGGCCTGGTGGCACCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTATCCAGATATAGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATGATATGGGGTGGTGGAAGCACAGACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGACTAGACGGTAACTACGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 34, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLDGNYGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 3, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARLDGNYGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4634 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14826:5624 (reversed)", "sequence" : "GCTCGAGGTACAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGCTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTTCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCATTGCAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 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"VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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{ "sequence" : { "name" : "ERR346596.4638 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16033:5627 (reversed)", "sequence" : "TGAAGAGGTTCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGGCGGATTTATCCTGGAGATGGAGATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACATATCCTCCGCCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAAATCTAGCGGTTTCTACAAGATGGGATACTATTCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCTTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 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"YRYEAWFASWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLDWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVNYRYGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4764 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8475:5711 (reversed)", "sequence" : "GCATGAGGTGAAGCTTCAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCACCTCAGCCAAAACAACACCCCCATCGGTTTATCCATTGTGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 36, 38, 34, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 30, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 36, 37, 38, 39, 37, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 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37, 38, 20, 37, 37, 37, 37, 37, 30, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVTS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.93%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVKPGGSLKLSCAASGFTFSDFYMFWFRQTPEKRLEWVATISNGGTYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVTS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4766 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8151:5711 (reversed)", "sequence" : "AAGGGAGGTCCAGCTGCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGGCAGTACTTACTACAATGAAATGTTCAAGGGCAAGACAACACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGATGTCTATTTCGGTGCAAGAGAGAGATATGGTTACGACGGGTGGTATTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCCTATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 19, 32, 35, 33, 37, 37, 37, 38, 38, 38, 33, 19, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 37, 38, 39, 37, 38, 39, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 38, 30, 36, 36, 38, 37, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 36, 39, 34, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 37, 39, 38, 38, 39, 39, 38, 39, 38, 39, 31, 38, 39, 39, 36, 38, 37, 37, 38, 39, 39, 39, 39, 39, 34, 38, 19, 37, 18, 37, 39, 39, 38, 37, 38, 37, 38, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 37, 37, 39, 39, 38, 39, 39, 39, 38, 33, 33, 37, 39, 38, 35, 38, 38, 38, 14, 38, 34, 31, 33, 38, 33, 34, 38, 39, 37, 37, 37, 15, 30, 37, 38, 38, 38, 32, 37, 33, 39, 39, 37, 27, 16, 16, 29, 35, 38, 37, 38, 39, 38, 38, 33, 36, 37, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 37, 36, 33, 34, 34, 34, 38, 24, 36, 37, 37, 37, 34, 39, 38, 34, 39, 37, 19, 10, 10, 37, 34, 34, 26, 25, 34, 39, 39, 38, 38, 39, 39, 37, 34, 33, 38, 36, 38, 38, 37, 35, 34, 33, 33, 38, 39, 39, 39, 39, 39, 37, 27, 27, 13, 13, 29, 16, 16, 35, 39, 38, 38, 38, 27, 33, 37, 39, 39, 39, 37, 39, 37, 37, 37, 38, 16, 38, 33, 38, 38, 37, 14, 27, 14, 14, 15, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 37, 39, 37, 38, 16, 37, 38, 36, 36, 30, 15, 38, 36, 36, 32, 38, 38, 37, 39, 33, 37, 39, 37, 36, 38, 37, 33, 37, 37, 33, 16, 30, 34, 36, 36, 34, 36, 38, 38, 36, 36, 39, 39, 38, 37, 37, 39, 38, 39, 36, 38, 38, 37, 34, 32, 32, 36, 16, 32, 32, 36, 37, 37, 33, 33, 33, 39, 38, 35, 35, 39, 37, 39, 38, 39, 39, 37, 38, 36, 36, 17, 32, 17, 30, 38, 38, 36, 37, 37, 37, 34, 38, 33, 32, 31, 35, 30, 32, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "YYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LLVFRCL" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFGARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4767 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20285:5711 (reversed)", "sequence" : "GCGACAGGTTCAGCTCCAGCAATCTGGACCTGACCTGGTGAAGCCTGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCTATCCCCTGCACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 33, 32, 33, 35, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 37, 35, 37, 34, 19, 37, 19, 18, 32, 38, 39, 39, 34, 37, 34, 37, 36, 32, 18, 37, 18, 33, 17, 17, 32, 33, 36, 39, 33, 20, 33, 32, 20, 38, 39, 38, 20, 20, 37, 37, 20, 38, 36, 38, 39, 37, 39, 38, 36, 39, 37, 38, 39, 33, 18, 37, 39, 37, 37, 39, 36, 33, 38, 38, 37, 37, 33, 38, 37, 18, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 37, 36, 36, 39, 39, 39, 39, 38, 39, 39, 36, 18, 33, 33, 38, 39, 39, 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38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 32, 32, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 334, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 333, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 366, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" } ] } ] }, { "sequence" : { "name" : "ERR346596.4768 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5777:5711 (reversed)", "sequence" : "ATATCAGGTCCAGCTTCAGCAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGCGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGTCTATCCCTTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 30, 32, 30, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 34, 33, 38, 38, 34, 34, 37, 37, 39, 39, 39, 39, 38, 37, 37, 36, 17, 32, 18, 37, 38, 39, 39, 38, 33, 36, 39, 39, 37, 17, 37, 39, 38, 38, 38, 38, 37, 39, 33, 38, 39, 37, 37, 39, 38, 37, 39, 37, 39, 38, 38, 39, 39, 36, 32, 34, 36, 38, 36, 38, 39, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 37, 33, 33, 37, 33, 33, 19, 31, 36, 34, 38, 39, 36, 38, 18, 37, 18, 37, 37, 35, 33, 37, 37, 38, 39, 39, 39, 38, 39, 33, 35, 37, 33, 37, 34, 34, 37, 38, 32, 38, 38, 37, 33, 38, 37, 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15, 32, 16, 37, 33, 38, 34, 37, 32, 32, 32, 37, 16, 33, 32, 16, 31, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSADTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSADTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4769 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20909:5712 (reversed)", "sequence" : "TTGTGACGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTCATCCACTGGATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 32, 32, 16, 29, 37, 18, 32, 32, 32, 32, 29, 36, 38, 38, 38, 38, 38, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 38, 15, 15, 36, 14, 32, 32, 37, 32, 37, 37, 38, 39, 37, 37, 38, 39, 39, 39, 39, 33, 38, 14, 32, 36, 39, 14, 15, 38, 38, 39, 39, 33, 37, 38, 39, 39, 39, 39, 39, 39, 37, 34, 37, 17, 37, 38, 32, 38, 39, 39, 39, 39, 16, 38, 38, 39, 39, 39, 38, 39, 39, 37, 37, 31, 33, 37, 37, 38, 39, 39, 16, 36, 38, 39, 39, 39, 39, 39, 35, 33, 37, 39, 39, 33, 38, 39, 37, 37, 36, 38, 38, 38, 39, 14, 16, 38, 39, 32, 34, 14, 33, 38, 39, 37, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4774 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16723:5713 (reversed)", "sequence" : "CTAAGAGGTGCACCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTTTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCCTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCCTTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFISRLNISKDNSKSQVFFEMNSLQTNDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWTGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNHRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSP GKGLEWLGVIWSGGSTDYNAAFISRLSISKDNSKSQVFFKMNSLQANDTAIYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV2-2" }, { "name" : "Videntity", "value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGWDYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GG" }, { "name" : "allele", "value" : "IGHD-ST4*01" }, { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWTGGSTDYNAAFISRLNISKDNSKSQVFFEMNSLQTNDTAIYYCARNHRGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4780 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34, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 33, 33, 33, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSTGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGYYGSPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCAREGYYGSPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4781 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23960:5717 (reversed)", "sequence" : 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"EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.16%" } ] }, { "name" : 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"ERR346596.4785 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23523:5721 (reversed)", "sequence" : "TTGAGATGTGCAACTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCGGCCCATCCCTTGCGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 36, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 32, 16, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 38, 38, 32, 34, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : 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32, 36, 38, 38, 38, 36, 30, 37, 32, 35, 30, 33, 37, 33, 33, 32, 29, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGSELRSPGSSVKLSCKDF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQKPGHGFEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DSEVFPIAY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 182, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYGEKFEDKATLDADTVSNTAYLELNSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 181, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPSIGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGAGTTDTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 296, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGNSLVYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "84" }, { "name" : "Source-Identity", "value" : "71.91%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.59%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCKASGYTFTSYDINWVRQRPEQGLEWIGWIFPGDNSTKYNEKFKGKATLTTDKSSSTAYMQLSRLTSEDSAVYFCAHDGLLPGMDYWGRGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4799 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16953:5726 (reversed)", "sequence" : "TACGGAAGTGAAGGTTGAGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAATTTACTACGGTAGTAGCTACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGTCTATCCACTGAGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 39, 38, 38, 36, 17, 36, 37, 39, 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38, 38, 39, 38, 37, 36, 38, 38, 39, 38, 38, 38, 33, 38, 38, 38, 38, 38, 38, 37, 37, 33, 37, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARIYYGSSYDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.29%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARIYYGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4800 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5992:5727 (reversed)", "sequence" : "TGATGAGGTGCAGGTGGTGGAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACCAGCTACTGGATGCACTGGGTAAAACTGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGATTTTTGTGGTCTCTGCGGTCTATTACTGTACAAATGGTTACGATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCTTGCCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 16, 32, 32, 18, 16, 16, 37, 31, 37, 37, 37, 38, 34, 37, 38, 38, 38, 38, 34, 37, 37, 37, 39, 38, 39, 38, 38, 34, 37, 34, 38, 38, 39, 38, 38, 38, 38, 15, 38, 37, 38, 38, 38, 38, 38, 39, 38, 38, 34, 38, 38, 38, 37, 36, 16, 37, 14, 32, 37, 16, 36, 33, 39, 33, 33, 38, 37, 37, 37, 35, 38, 37, 39, 38, 38, 36, 37, 37, 37, 36, 39, 33, 34, 16, 37, 37, 37, 39, 39, 16, 33, 38, 37, 37, 37, 39, 37, 37, 37, 39, 39, 37, 38, 37, 37, 38, 37, 37, 39, 38, 39, 34, 37, 36, 33, 37, 16, 16, 37, 33, 37, 36, 36, 32, 37, 37, 39, 15, 15, 16, 37, 37, 38, 39, 39, 38, 37, 38, 38, 16, 37, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 37, 37, 39, 39, 39, 38, 38, 33, 35, 38, 37, 39, 16, 37, 27, 35, 37, 39, 39, 37, 38, 33, 33, 37, 35, 37, 37, 39, 38, 36, 37, 36, 37, 37, 37, 39, 37, 15, 29, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 34, 15, 24, 38, 34, 34, 38, 38, 38, 39, 39, 39, 39, 37, 39, 38, 38, 38, 39, 38, 39, 39, 38, 39, 37, 39, 39, 39, 38, 39, 39, 37, 38, 37, 38, 39, 39, 38, 39, 37, 31, 31, 14, 15, 15, 14, 14, 14, 15, 14, 33, 33, 14, 14, 38, 34, 38, 38, 39, 39, 37, 33, 37, 38, 39, 38, 39, 39, 39, 39, 36, 39, 39, 39, 39, 37, 38, 38, 38, 38, 37, 39, 38, 37, 38, 33, 39, 39, 39, 38, 38, 37, 38, 34, 17, 33, 16, 33, 38, 39, 38, 33, 39, 38, 38, 34, 37, 37, 36, 37, 38, 38, 38, 37, 37, 39, 37, 38, 38, 33, 38, 39, 37, 37, 38, 38, 37, 37, 37, 38, 38, 37, 34, 32, 32, 38, 38, 39, 36, 15, 38, 38, 38, 37, 38, 38, 36, 34, 36, 34, 36, 39, 37, 35, 33, 16, 38, 38, 37, 34, 38, 38, 37, 30, 31, 32, 32, 31, 32, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKLRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAKLTAVTSASTAYMELSSLIFVVSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNSDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TNGYDYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGTVLARPGASVKMSCKASGYSFTSYWMHWVKLRPGQGLEWIGAIYPGNSDTSYNQKFKGKAKLTAVTSASTAYMELSSLIFVVSAVYYCTNGYDYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4921 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21067:5794 (reversed)", "sequence" : "CCTTGAGGTGCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCACTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 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37, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4923 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19508:5795 (reversed)", "sequence" : "GTCTGAGGTGCAGCTTCAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACATTGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTATTGTGCAAGAGATCGTGGGGTACAGGGCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCGCCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 34, 34, 37, 37, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 32, 35, 37, 39, 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38, 38, 38, 38, 37, 38, 38, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.12%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VQPYRSIDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : 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"TGATGAAGTGAAGCTTGAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCACCTCTCAAATCCAGACTGAGCATCAGTAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGTACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACTTAACTGGGACGAGGGGGACTACTGGGGCCAAGGCACCGCTCTCACAGTCTCCTCAGCTACAACAGCAGCCCCATCGGCCTATCCACTGCCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 36, 39, 39, 32, 35, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 35, 38, 38, 39, 38, 37, 38, 38, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 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"CATTCAGGTTCAGCTTCAGCAGTCTGGACCTGAGGTGGTAAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGCCTACTACATTCACTGGGTGAAGCAAAGTCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTAGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAAAGTCCTCCAGCAGAGCCTACATGGAGGTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGATCACCCCCTGGGGTTTTCTTATTGGGGCCTAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 33, 37, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 37, 37, 38, 39, 39, 38, 38, 39, 38, 37, 38, 39, 38, 37, 39, 39, 24, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 37, 38, 38, 38, 38, 38, 38, 39, 37, 37, 39, 34, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 37, 37, 39, 38, 39, 38, 25, 37, 37, 39, 39, 36, 39, 39, 38, 34, 34, 15, 37, 39, 38, 14, 37, 39, 39, 39, 35, 37, 39, 39, 39, 38, 33, 33, 38, 37, 35, 38, 37, 16, 16, 38, 37, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 14, 38, 38, 34, 35, 39, 37, 38, 39, 37, 39, 39, 33, 37, 39, 39, 39, 38, 35, 33, 38, 38, 37, 38, 38, 34, 38, 38, 38, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 38, 37, 36, 34, 37, 33, 33, 37, 37, 39, 39, 39, 39, 39, 36, 38, 39, 39, 38, 38, 37, 18, 39, 37, 36, 36, 36, 36, 37, 38, 38, 37, 39, 39, 37, 39, 38, 34, 38, 37, 38, 39, 38, 36, 36, 38, 38, 39, 38, 38, 36, 30, 36, 34, 38, 38, 38, 37, 32, 32, 31, 37, 37, 37, 37, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPEVVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTAYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIRTRAYYDHPLGFSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.39%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPEVVKPGASVKISCKASGYSFTAYYIHWVKQSHVKSLEWIGRINPYNGDTSYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYCAIRTRAYYDHPLGFSYWGLGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4750 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25169:5702 (reversed)", "sequence" : "TTCAGAGGTGATGTTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCATTGGTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 37, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 37, 37, 38, 38, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 35, 32, 37, 39, 39, 39, 39, 37, 39, 39, 38, 37, 39, 37, 37, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 37, 39, 39, 37, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 33, 38, 37, 37, 38, 38, 38, 37, 38, 38, 39, 38, 39, 39, 39, 39, 37, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 36, 39, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 38, 33, 39, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 37, 39, 39, 37, 17, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 30, 37, 39, 37, 39, 39, 39, 39, 39, 39, 37, 37, 37, 38, 38, 39, 39, 39, 38, 38, 38, 36, 36, 36, 35, 38, 37, 36, 39, 39, 39, 38, 39, 39, 38, 39, 36, 38, 39, 39, 38, 39, 36, 38, 37, 38, 39, 38, 39, 38, 39, 37, 38, 39, 39, 36, 36, 39, 39, 39, 37, 39, 36, 37, 36, 37, 38, 38, 39, 38, 37, 38, 37, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGSSFYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLAFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDGSSFYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4751 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22129:5703 (reversed)", "sequence" : "GCCAGAGGTGAAGTTGGTGGAGTCTGGGGGAGACTTAGTGAGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTGGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTTCAAGACTGAGCTATGATTACGACGGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTCTATCCATTGCAGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 37, 33, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 37, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 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"AGCAGAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAGATAGGAGGATTACTACGGCTACATATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATTGCCCATCCCTTGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 38, 34, 38, 38, 37, 38, 38, 39, 39, 37, 33, 38, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 38, 35, 38, 38, 39, 38, 39, 39, 38, 38, 34, 37, 31, 38, 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36, 38, 37, 37, 33, 38, 37, 38, 38, 38, 38, 37, 32, 37, 32, 33, 37, 37, 33, 33, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRRITTATYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.11%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARDRRITTATYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4885 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13866:5779 (reversed)", "sequence" : "TGGAGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGACTTCTGGTTACTCATTCACTGGCTACAACATGAACTGGGTGAAGCAGACCAATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGGTACTAGCTACAACCAGAACTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCACCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTTCAGTCTATTACTGTGCAAAACTGGGACGGGCGGGTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCTGTTCATCCACTGCTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 31, 31, 33, 32, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 19, 19, 38, 37, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 17, 33, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 35, 38, 32, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 36, 39, 36, 33, 38, 38, 38, 37, 33, 38, 39, 39, 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20, 33, 38, 37, 37, 33, 37, 35, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQTNGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQNFKGKATLTVDKSSTTAYMQLKSLTSEDSSVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKLGRAGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKTSGYSFTGYNMNWVKQTNGKSLEWIGNIDPYYGGTSYNQNFKGKATLTVDKSSTTAYMQLKSLTSEDSSVYYCAKLGRAGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4886 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18935:5780 (reversed)", "sequence" : "GCAGGAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTAAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGATTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGGTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCACTGCGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 36, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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"ATCGGATGTGAAGCTTCAGGAGTCTGGGGCAGACCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGAAGGATTGATCCTGCGAGTGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATAAAGTCTCCCTGCAGCTCAGCGGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCATGATGCCCCTTTTACTTACTGGGGCCAAGGGACTCTGGTCACCGTCTCTGCAGCCAAAACAACAGCCCCATCAGCTCATCCCTTGAACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 32, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 17, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 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"EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : 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"CCGTGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGTTACCATAGCTCGGGCTACGCTATGGACTACTGGGGCCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCCCTGGCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 33, 34, 34, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 37, 38, 38, 39, 39, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 36, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 36, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 37, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 18, 38, 39, 38, 34, 34, 37, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 30, 30, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 39, 38, 39, 38, 33, 16, 38, 36, 37, 36, 38, 38, 37, 38, 38, 39, 36, 38, 39, 38, 36, 32, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 38, 38, 34, 38, 38, 38, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYHSSGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.16%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCASYHSSGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4898 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9970:5783 (reversed)", "sequence" : "TCTTGAGGTGCAGCTGGTGGAGTCAGGACCTGGCCTGGTGGCACCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTATCCAGATATAGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAATGATATGGGGTGGTGGAAGCACAGACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATTTACTACTGTGCCAGGTTGTATGGTAACTACGGAGGTTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCACTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 32, 32, 32, 32, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 19, 38, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 30, 38, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 18, 32, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 17, 38, 37, 38, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 38, 38, 38, 38, 37, 37, 38, 39, 36, 39, 39, 38, 39, 38, 38, 38, 35, 38, 38, 38, 39, 39, 36, 37, 39, 36, 39, 38, 37, 37, 34, 36, 39, 39, 39, 38, 39, 37, 39, 38, 38, 38, 38, 39, 38, 38, 36, 38, 36, 39, 33, 35, 15, 35, 17, 37, 30, 34, 36, 14, 14, 37, 35, 38, 38, 32, 38, 39, 37, 38, 37, 34, 37, 37, 28, 34, 38, 38, 37, 33, 38, 39, 35, 37, 35, 37, 37, 36, 15, 37, 38, 33, 34, 37, 38, 33, 39, 39, 39, 38, 38, 39, 37, 38, 37, 39, 38, 39, 39, 39, 37, 37, 28, 24, 32, 35, 37, 36, 38, 27, 37, 37, 38, 38, 38, 34, 38, 33, 39, 38, 37, 37, 33, 39, 37, 38, 36, 24, 34, 33, 39, 39, 38, 38, 37, 37, 38, 38, 37, 16, 34, 37, 37, 37, 35, 27, 37, 37, 35, 37, 35, 17, 39, 37, 37, 38, 31, 17, 27, 37, 39, 38, 38, 17, 38, 38, 39, 37, 39, 35, 33, 17, 39, 39, 37, 37, 36, 37, 39, 39, 36, 38, 37, 38, 37, 18, 39, 39, 37, 39, 39, 38, 37, 36, 32, 37, 37, 39, 39, 39, 39, 38, 19, 38, 39, 39, 39, 38, 19, 38, 39, 39, 38, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 34, 39, 39, 37, 37, 39, 39, 39, 39, 37, 36, 36, 18, 37, 39, 37, 38, 39, 39, 34, 34, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 36, 36, 36, 38, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 35, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGM" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLSRYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLYGNYGGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "21" }, { "name" : "Source-Identity", "value" : "92.83%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCARLYGNYGGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4899 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12966:5783 (reversed)", "sequence" : "TGGGGAAGTGAAGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTCTCATTAACCAACTATGCTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATTATTCGGCTCCCATGTCCAGACTGTGCATCAGCAAAGACAACTCCAAGACCCAAGTTTTCCTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGGTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCCCTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 29, 16, 32, 32, 32, 32, 37, 37, 37, 37, 38, 18, 37, 37, 38, 16, 37, 36, 38, 38, 39, 39, 16, 37, 39, 33, 15, 15, 33, 32, 15, 15, 15, 37, 15, 37, 39, 39, 15, 15, 32, 37, 38, 14, 14, 14, 32, 14, 33, 38, 16, 15, 33, 37, 39, 39, 16, 33, 16, 35, 37, 39, 16, 38, 16, 37, 39, 16, 31, 38, 16, 37, 17, 37, 38, 39, 39, 39, 39, 33, 39, 38, 15, 31, 33, 17, 37, 39, 17, 38, 16, 16, 38, 14, 36, 38, 39, 39, 17, 16, 17, 16, 33, 16, 17, 17, 31, 37, 38, 39, 39, 39, 38, 38, 38, 34, 38, 38, 38, 32, 37, 39, 39, 39, 39, 39, 33, 14, 37, 38, 38, 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37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGVHGPLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : 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"ERR346596.4841 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17672:5747 (reversed)", "sequence" : "GGGGCAGGTGCAGCTGAAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGAGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGATTACTACGGTAGTAGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCTATCCCCTGGGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 32, 35, 37, 34, 37, 37, 37, 38, 38, 37, 38, 38, 38, 38, 38, 33, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 39, 38, 37, 38, 39, 38, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 33, 37, 37, 37, 39, 39, 38, 37, 39, 39, 39, 39, 39, 37, 39, 36, 37, 37, 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"sequence" : { "name" : "ERR346596.4842 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19885:5748 (reversed)", "sequence" : "GAGTCAGGTCCACGTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCTCATCCCTTGGCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14523:5751 (reversed)", "sequence" : "CGCTCAGGTCCAGCTGCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCCATCCCTTGGCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 32, 32, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 34, 38, 39, 39, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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35, 37, 37, 38, 39, 39, 36, 32, 39, 39, 39, 38, 39, 38, 38, 36, 36, 38, 38, 39, 37, 38, 37, 32, 38, 38, 38, 38, 38, 37, 37, 32, 33, 33, 33, 32, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTSGYTFTNYWINWIKQRPGQGLEWLGRIAPGSGSTYYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4850 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16617:5755 (reversed)", "sequence" : "ATCTCAGGTCCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGGTATCCTGCAGGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCCCCAGCACAGCCTTCATGCATCTCAACAGCCTGACATCGGAGAACTCGGAAGCTAATTACTGTGAAAGTTACCTAGGCTGGGCTTCGGCTATGACCTCCGGGGTCCAGGGACCTCAAGCCCCGTTCACCTAGGCAAAACAACAGCCCCATCTGCCTATCCCTTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 38, 37, 36, 36, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 37, 39, 38, 37, 39, 37, 38, 39, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 37, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKVSCRAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSPSTAFMHLNSLTSENSEANYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 328, "max" : 360, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"CGAGGAGGTGCAGCTGCAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCCTGAGTGGATTGGAGAGATTAATCCTAACAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCACCTCAGCAGCCTGACATCTGAGGACGCGGCGGTCGAGTACTGTGCAAGAAGCGGTTACGACGGGTTTGCGTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGCCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 38, 34, 39, 34, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 36, 37, 14, 37, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 39, 38, 38, 15, 38, 39, 37, 39, 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"qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISWIRQPPGKGLEWLGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GISLTDYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNPALRSRLTISKDNSRSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVAVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKQYGNSDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "31" }, { "name" : "Source-Identity", "value" : "89.42%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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: "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVSGISLTDYVISWIRQPPGKGLEWLGIIWGGGSTYYNPALRSRLTISKDNSRSQVFLKMNSLQTDDTAMYYCAKQYGNSDWYFDVWGAGTTVAVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4859 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15344:5761 (reversed)", "sequence" : "ATAACATGTTCAGCTTCAGCCGTCTGGAGATGATCTGGTAAAGTCTGGGGCCTCAGTGCAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATCCAACCGAGGCCTGGACCGGGCCTTGCGTGGATAGGACGTATTTCTCCTTGAAGTGGTAGTACTTCCTACATGAAATGTTCCAGGGCCAGGCAACCCTGACTGTAGACACATCCTCCAGCACCGCCTACCTTCAGCCCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTAGGTCTGTGCAAGATTTCCATGTTACTACGGTAGTAGCTGGGACGACTTTGACGACTGGGGCCAAGGCACCACGCTCACAGTCTCCGCAGCCAAAACAACACCCCCATCAGTCCATCCCTTGGCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 32, 29, 16, 29, 16, 18, 16, 33, 35, 37, 18, 18, 33, 38, 16, 33, 16, 33, 37, 16, 32, 36, 36, 39, 32, 37, 16, 15, 16, 33, 33, 18, 37, 38, 39, 16, 16, 37, 16, 17, 16, 32, 37, 38, 39, 37, 15, 15, 32, 33, 36, 37, 39, 16, 33, 35, 33, 16, 17, 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"EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSSTAYMQVRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSSTAYMQVRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04548" }, { "name" : "Source-Mismatches", "value" : "62" }, { "name" : "Source-Identity", "value" : "78.91%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 326, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : 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(reversed)", "sequence" : "NTGGGAGGTGCAGCTTCAGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCCATCCCTTGCCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 32, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 35, 38, 38, 38, 38, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 32, 39, 37, 37, 38, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 18, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARREDYDYDYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRSGASVRLSCTASGFNIKDYYVHWVKQRPEQGLEWIGWIDPENGDTEYAPKFQGEATMTADTSSNTAYLHLSSLTSEDTAVYYCNAWGDDDYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4941 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25192:5808 (reversed)", "sequence" : "ATGTGATGTGAAGCTTCAGGAGTCTGGAGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGATACATCTTCACAACCTACTGGATTCACTGGGTAAAACAGAGGTCTGGACAGGGCCTTGAGTGGATTGCAAGGATTTATCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGAAATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGTCCCCTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACGGCCCCATCTGCCTATCCCCTGCGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 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"sequence" : "GATGCAGGTGCAGCTCAAGGGGCCTGGGCCCGAGGTGGTAGAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTCCTCATTACCTGCCTACTACCTTACCTGGGGGAAGCAAAGTAATGTAAAGAGCCTTGGGTGGATTGGGCGTATTAATCCTTACATTGGTGTTTTTCGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAAAGTCCTCCAGCAGAGCCTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGAGCACCCCCTGGGTTTGTCTTATTGGGGCCTAGGGACCCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCAGCCCATCCATTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 29, 32, 33, 37, 16, 16, 16, 16, 16, 32, 34, 34, 16, 33, 33, 16, 16, 16, 15, 15, 32, 33, 37, 39, 15, 34, 36, 15, 32, 15, 14, 14, 14, 33, 32, 14, 32, 16, 16, 16, 35, 15, 33, 38, 39, 38, 34, 36, 36, 38, 15, 16, 35, 17, 17, 33, 17, 16, 16, 35, 16, 35, 37, 17, 35, 16, 16, 37, 16, 33, 37, 34, 37, 38, 15, 33, 38, 16, 38, 16, 16, 16, 17, 16, 16, 33, 33, 17, 33, 16, 37, 16, 15, 15, 16, 16, 29, 16, 16, 16, 15, 16, 16, 16, 16, 15, 16, 37, 39, 14, 14, 14, 29, 14, 30, 14, 16, 33, 16, 15, 29, 17, 17, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GSSLPAYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYNQNFKDRANLTVEKSSSRAYMELHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPYIGVF" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIRTRAYYEHPLGLSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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"CAGGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGCCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGAACAGCGTTCATGGAACTCCACAGCATGACATCTGAGGACTCTTTGGTCTATTACTGTGCAAGACAATTGTATGGTAACTACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGTTCATCCCTTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 30, 32, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 33, 38, 34, 39, 39, 39, 39, 39, 39, 19, 33, 38, 39, 34, 36, 38, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 36, 17, 17, 17, 37, 39, 36, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 20, 37, 36, 38, 39, 20, 37, 20, 38, 39, 39, 39, 39, 39, 17, 37, 37, 37, 39, 39, 39, 39, 33, 38, 38, 39, 39, 39, 39, 36, 16, 18, 37, 38, 39, 39, 34, 34, 18, 37, 39, 39, 39, 39, 18, 37, 38, 15, 18, 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16, 32, 32, 32, 30, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGPSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDTSSRTAFMELHSMTSEDSLVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQLYGNYAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, 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"CCGTGAGGTCCAGCTTCAGCAGTCTGAGTCCACACACCACTCCTGGTCCCAGAAGTCACGGCAAGCACTGAGAATTCTCCCTCAGAAAATGTGACAGGGGGAAGAGAAGGACACTTTCCTTTGTGTTGCTCCCCCCTGACTGGTTAGATGAGGTGTCCTCCTCACAATGTGGTCCCCCTTGCCCTCTATGGGGTACTCACTTGGCCTGTAGAAAGAGCTCCTTGTTGAAAGGCTTGTGTCCCCACTTGTTTCTCTTCCCCCATCGGTTTATCCCCTGTTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 31, 32, 32, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 38, 39, 34, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 37, 39, 38, 37, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 37, 38, 38, 38, 38, 36, 39, 39, 39, 38, 39, 39, 33, 38, 37, 37, 38, 38, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 33, 39, 38, 39, 38, 39, 39, 39, 39, 39, 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"name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4954 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13336:5812 (reversed)", "sequence" : 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33, 32, 33, 37, 37, 37, 37, 32, 32, 32, 30, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARIYYGSSYDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARIYYGSSYDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4955 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5859:5812 (reversed)", "sequence" : "TCATGACGTGAAGCTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTGCAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTTATCCACTGATTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 34, 31, 32, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 35, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 18, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 38, 33, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 37, 37, 39, 39, 39, 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37, 37, 37, 32, 32, 29, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELVRSGASVRLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPELGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IDPENGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NRGMVTTNAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELVRSGASVRLSCTASGFNIKDYYMHWVKQRPELGLEWIGWIDPENGDIVIAPQLQGKATMTADPSSNTAYLQLNSLTSEDTAVYYCNRGMVTTNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4956 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:26156:5813 (reversed)", "sequence" : "NCGAGAAGTGAAGGTCGAGGAGTCTGGGACTGTGCTGGCAAGGCCAGGGGCTTCATTGAGGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAATGATACCAAATACACCCAGAAGTTCAAGGCCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCGACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTGCTGTGCAAGAAACTGGGACTGGGTGTTTGCTTACTGGGGCCAAGGCACTCTGGTCACTGTCTCTGCAGCTAAAACAACAGCCCCATCAGCCTATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 2, 29, 29, 16, 29, 32, 32, 37, 37, 37, 37, 37, 35, 37, 37, 16, 32, 32, 36, 32, 36, 36, 38, 39, 39, 37, 33, 15, 32, 37, 38, 39, 37, 35, 39, 39, 39, 16, 15, 36, 36, 14, 37, 14, 37, 36, 39, 37, 38, 34, 38, 36, 39, 36, 33, 35, 38, 37, 16, 16, 33, 34, 38, 34, 34, 38, 39, 39, 39, 39, 39, 38, 39, 37, 36, 39, 15, 38, 39, 37, 39, 39, 39, 39, 39, 33, 34, 39, 39, 39, 38, 39, 36, 33, 37, 16, 36, 37, 16, 33, 33, 33, 38, 38, 37, 16, 38, 37, 39, 39, 39, 39, 33, 38, 33, 38, 39, 36, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 38, 38, 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32, 16, 32, 32, 29, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYCC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGNNDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWDWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGTVLARPGASLRMSCKASGYTFTNYWINWIKQRPGQGLEWIGAIYPGNNDTKYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYCCARNWDWVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4957 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6038:5813 (reversed)", "sequence" : "CGTCGAGGTGCAACTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGACCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAATGCCCGTGGGGATTACGACTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCTTATCCACTGAGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 18, 35, 33, 32, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 35, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 38, 38, 39, 39, 38, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 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"EVKLEESGPGPGAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAVGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARERENDGYYDIDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5091 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14329:5885 (reversed)", "sequence" : "AAGGCAGGTTCAGCTTCAGCAGTCTGGAGCTGAACTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAATGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGGGACGGCTCCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCTGTCCATCCACTGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 33, 33, 37, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 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] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { 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"QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGMINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5093 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23955:5887 (reversed)", "sequence" : "CGTCCAGGTCCAACTACAGCAACCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGACTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGACAGGGGGTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCACTGAATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 18, 32, 37, 37, 37, 37, 37, 34, 37, 38, 38, 37, 38, 37, 38, 34, 38, 37, 32, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQKPGQGLEWTGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQGVDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.59%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWTGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARQGVDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4834 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22638:5743 (reversed)", "sequence" : "ATCCCAGGTCCAGCTTCAGCAATCTCGTACGCCGCCTTTTACTCGAAAAAACTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCGGAGGACACTGCCGTCTATGACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCGCTGCAGCCAAAACGACACCCCCATCAGGTCATCCCTTGACAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 32, 16, 16, 34, 37, 32, 37, 16, 16, 33, 38, 38, 38, 16, 32, 16, 33, 16, 37, 16, 38, 38, 39, 18, 37, 15, 15, 15, 15, 15, 32, 32, 15, 14, 33, 14, 16, 16, 17, 33, 16, 16, 14, 33, 15, 14, 14, 15, 14, 32, 16, 32, 33, 32, 35, 35, 36, 35, 39, 39, 39, 35, 39, 39, 39, 38, 16, 37, 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"value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYDC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVAA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSRTPPFTRKNSVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYDCAIYYYGSSGFAYWGQGTLVTVAA" } ] } ] }, { "sequence" : { "name" : "ERR346596.4835 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14313:5743 (reversed)", "sequence" : "GGAAGAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGACGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGTGAGGAACTGGGCCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCACAGCTCATCCACTGCAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : 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"EVKLMESGPELVKPGALVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADKSSSTAYMQLSSLTSENSADYFCARSGGDSMDYWGQGTSVAVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4965 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6094:5817 (reversed)", "sequence" : "AAGAGAGATTCAGCTCCAGCAGTCTATCCCCATCGTCCTATCCCCTGTGGATTATCGGAAGATCACACGTCTGAATTCTAGTTTCAGTTTCGCTTCTTGTTTGCTGTCCTGTGTTTGACAGCATCAAGGACAGGCACTTGCGTGGTTGGGTTTTATTAGGCCCCAAGCTAATGGTTACACAACAGAGTACAGTGCATATGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCACAGCATCCTCTATCTTCAAATGAACACCCTCAAAGCTGAGGACAGTGCCACTTATTACTTTGTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTAAGCGAGGTTCAGCTCCAGCAGTCTATCCCCATCGGCCTATCCCCTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 16, 16, 16, 29, 16, 33, 16, 31, 18, 33, 33, 33, 16, 16, 16, 33, 33, 38, 38, 39, 39, 39, 18, 33, 37, 15, 16, 15, 15, 15, 37, 15, 15, 15, 15, 33, 35, 17, 32, 15, 37, 37, 38, 38, 16, 38, 39, 16, 16, 16, 32, 35, 37, 14, 36, 36, 14, 14, 15, 16, 33, 16, 33, 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37, 36, 34, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"TGGCGAGGTGCAGCTGCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGTGAAGATGTCCTGCAAGGCTTCTGGCTACAGCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTTATCCTGGAAATGGTGATACTAGCTACAACCAGAAGTTCAAGGACAAGGCAAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTACAAGAAGAAGCGATTATGGAAAAAAGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCCGCCAAAACAACACCCCCATCAGCCCATCCCCTGTCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 33, 33, 33, 32, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 38, 36, 38, 38, 39, 39, 39, 38, 39, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 33, 39, 37, 38, 38, 33, 37, 39, 39, 39, 38, 39, 37, 39, 39, 36, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 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39, 37, 38, 38, 37, 37, 19, 38, 32, 36, 32, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"CGTCGAGGTGCAACTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGCCTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGACCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATGACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGTACACTTCCGTCTATTACTGGAATGCCCGTGGGGATTACGACTTTGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCTTATCCACTGAGAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 18, 30, 35, 32, 32, 33, 37, 38, 38, 38, 34, 38, 38, 38, 38, 34, 37, 38, 38, 38, 37, 38, 38, 38, 34, 36, 38, 32, 32, 37, 37, 37, 38, 39, 39, 39, 38, 37, 39, 38, 36, 39, 38, 38, 38, 34, 38, 38, 39, 38, 39, 38, 36, 37, 36, 38, 37, 38, 37, 39, 36, 36, 39, 38, 37, 36, 38, 38, 38, 38, 39, 38, 38, 36, 38, 38, 38, 39, 39, 38, 37, 18, 33, 33, 33, 38, 31, 33, 33, 19, 18, 33, 31, 37, 36, 38, 19, 38, 37, 38, 33, 37, 37, 39, 38, 39, 38, 39, 34, 14, 30, 33, 19, 37, 18, 18, 36, 37, 32, 36, 36, 38, 36, 17, 33, 37, 33, 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32, 32, 16, 38, 38, 35, 38, 37, 37, 37, 37, 37, 35, 37, 32, 29, 16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELVRSGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKAYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EYAPKFQGKATMTADTSSNTAYLQLSSLTSEYTSVYYW" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPENGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NARGDYDFDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGAELVRSGASVKLSCTASGFNIKAYYMHWVKQRPEQGLEWIGWIDPENGDTEYAPKFQGKATMTADTSSNTAYLQLSSLTSEYTSVYYWNARGDYDFDYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4970 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6957:5819 (reversed)", "sequence" : "AGATGATGTAAAGCTTCAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACATCTATTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACGATGCCAAGAACAACCTGTATCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTACAAGAGATCGTGGGGTACAGGGTTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCTATCCACTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 33, 20, 37, 38, 37, 34, 39, 39, 39, 39, 39, 39, 38, 38, 17, 36, 36, 38, 39, 39, 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDDAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGSYI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRDRGVQGYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "VQPYRSIDYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "VQ" }, { "name" : "IMGT_allele", "value" : "IGHD6-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD6-13" }, { "name" : "Source-Sequence", "value" : "AF062245" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGGGLVKPGGSLKLSCAASGFTFSDFYMYWVRQTPEKRLEWVATISDGGSYIYYPDSVKGRFTISRDDAKNNLYLQMSSLKSEDTAMYYCTRDRGVQGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4972 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6286:5820 (reversed)", "sequence" : "GAAGCAGGTGCAGCTGAAGGAGTCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAATTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGCGGACTCTGCAGTCTATTACTGTGCAAGATCGTATGGTAACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTTCATCCATTGCGAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 34, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 37, 39, 39, 39, 39, 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39, 39, 38, 36, 39, 39, 39, 38, 37, 30, 30, 36, 35, 37, 38, 37, 39, 37, 36, 36, 36, 38, 38, 38, 39, 38, 39, 37, 39, 38, 39, 37, 37, 36, 32, 20, 37, 36, 39, 38, 37, 37, 36, 37, 36, 33, 34, 37, 17, 38, 39, 39, 36, 34, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 38, 39, 37, 38, 38, 34, 38, 37, 37, 36, 33, 38, 35, 34, 33, 37, 32, 33, 32, 32, 32, 30, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSADSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "29" }, { "name" : "Source-Identity", "value" : "90.14%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSADSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4973 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9400:5821 (reversed)", "sequence" : "TGTGGACGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGGGGTCGAGAATGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACGCCCCCATCTGTCCATCCCCTGTGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 37, 37, 33, 33, 33, 33, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 37, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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"100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVSGFSLTSYGVSWVRQPPGKGLEWLGVIWGDGSTNYHSALISRLSISKDNSKSQVFLKLNSLQTDDTATYYCAKEVWYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4976 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19365:5823 (reversed)", "sequence" : "TCATGAGGTGCAGGTGGTGGAGTCTGGGGCAGAGCTTGTGAGGTCAGGGGCCTCAGTCAGGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACTGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATATTGTAATTGCCCCGCAGCTCCAGGGCAAGGCCACAATGACTGCAGACCCATCCTCCAACACAGCCTACCTGCAGCTCAACAGTCTGACATCTGAGGACGCTGCCGTCTATTACTGTAATCGCGGGATGGTTACGACGAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCCTTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"AATCGACGTGAAGTTGGTGGAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTTTTTCTGTGCAAGACACGAAGATAGGCTACGGGCCTGGTTTGCTTACTGGGACCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGCTCATCCATTGTGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 34, 34, 34, 34, 34, 34, 38, 38, 38, 38, 38, 36, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVFFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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(reversed)", "sequence" : "TCGTCAGGTCCAACTGCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGAGGGCGATATGATTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTTATCCATTGGGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 38, 37, 37, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 35, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 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37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"ERR346596.4985 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24281:5827 (reversed)", "sequence" : "TGGTCAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGGGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCCCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGACGAGATGGTAACTACGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGGAGCCAAAACAACAGCCCCATCGGCCCATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 19, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 32, 36, 37, 38, 37, 39, 39, 37, 37, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 16, 33, 36, 39, 37, 18, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 36, 39, 38, 38, 38, 39, 38, 36, 37, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 39, 36, 37, 30, 37, 38, 38, 39, 37, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 29, 38, 39, 39, 39, 37, 38, 39, 22, 38, 39, 39, 39, 39, 38, 39, 39, 39, 35, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 36, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 34, 37, 38, 38, 38, 37, 37, 37, 38, 38, 39, 39, 38, 37, 37, 38, 38, 39, 39, 37, 38, 38, 33, 39, 38, 38, 37, 38, 33, 38, 39, 38, 39, 39, 38, 39, 39, 38, 36, 39, 38, 38, 37, 37, 37, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 37, 38, 39, 36, 38, 39, 39, 39, 37, 34, 33, 37, 35, 36, 37, 37, 37, 14, 36, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 34, 38, 38, 38, 38, 37, 34, 36, 38, 37, 39, 39, 39, 39, 37, 36, 39, 37, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 37, 38, 36, 32, 39, 39, 38, 37, 38, 39, 37, 39, 39, 39, 37, 39, 38, 39, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 32, 33, 33, 35, 30, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSPSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVSG" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGNYAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGTNYNEKFKGKATLTADKSPSTAYMQLSSLTSDDSAVYFCARRDGNYAWFAYWGQGTLVTVSG" } ] } ] }, { "sequence" : { "name" : "ERR346596.4986 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5808:5827 (reversed)", "sequence" : "GTCAGAGGTTCAGCTTCAGCAGTCTGGGGCTGAGCTGGCACGACCTGGGGCTTCCGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTTACTGGCTACTGGATGCAGTGGGTTCAACAGTGGCCTGGCCAGGGTCTGGAATGGATTGGGATTATTTATCCTCGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCGTACAGCACAGCCTTCATGCAACTCTGGAACTTGGCATCCAAGTACTCTGCGGTCTACTACGGTGCAAGAGTTTTCTACGATAGTACCTCTGTCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGCGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 30, 16, 29, 16, 34, 32, 37, 37, 37, 33, 18, 38, 38, 38, 16, 16, 33, 33, 35, 38, 39, 39, 39, 39, 39, 15, 36, 30, 36, 38, 15, 15, 16, 35, 38, 39, 34, 34, 16, 32, 36, 36, 38, 38, 39, 38, 32, 36, 30, 34, 38, 39, 33, 36, 39, 38, 36, 32, 35, 32, 37, 16, 38, 37, 16, 37, 39, 16, 15, 16, 31, 37, 36, 34, 39, 38, 39, 39, 39, 16, 38, 35, 38, 16, 37, 15, 33, 38, 39, 37, 16, 37, 39, 36, 36, 39, 16, 38, 38, 39, 39, 15, 37, 38, 15, 36, 16, 38, 39, 39, 39, 38, 38, 15, 16, 17, 33, 36, 37, 16, 27, 15, 37, 38, 37, 38, 27, 15, 15, 33, 27, 38, 38, 37, 39, 33, 37, 38, 39, 16, 37, 39, 39, 16, 31, 38, 37, 37, 37, 33, 37, 37, 33, 38, 39, 37, 26, 2, 37, 34, 35, 2, 33, 30, 29, 15, 27, 37, 26, 29, 38, 38, 38, 16, 16, 29, 16, 28, 26, 27, 34, 24, 15, 26, 15, 15, 27, 15, 27, 15, 24, 28, 15, 15, 15, 28, 15, 27, 17, 14, 25, 34, 34, 38, 15, 15, 26, 15, 26, 27, 34, 25, 37, 37, 15, 18, 15, 24, 34, 15, 26, 34, 15, 37, 32, 12, 34, 15, 2, 28, 28, 15, 34, 33, 14, 34, 22, 37, 16, 16, 14, 27, 28, 16, 16, 16, 27, 26, 13, 29, 16, 16, 16, 27, 16, 16, 14, 16, 16, 16, 15, 16, 27, 16, 16, 16, 16, 17, 16, 17, 16, 14, 14, 14, 33, 33, 27, 16, 33, 17, 17, 33, 30, 14, 30, 27, 36, 15, 33, 16, 16, 16, 16, 16, 27, 16, 15, 15, 16, 33, 14, 14, 33, 15, 32, 35, 37, 35, 37, 35, 38, 33, 38, 39, 39, 37, 35, 37, 17, 37, 37, 37, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 36, 33, 38, 39, 37, 38, 39, 39, 36, 15, 39, 39, 39, 39, 39, 38, 38, 36, 36, 15, 38, 39, 38, 38, 38, 38, 38, 38, 33, 15, 15, 16, 32, 32, 35, 35, 35, 35, 35, 32, 32, 29, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVQQWPGQGLEWIGI" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "RYTQKFKGKATLTADKSYSTAFMQLWNLASKYSAVYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPRDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVFYDSTSVY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "49" }, { "name" : "Source-Identity", "value" : "83.33%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 359, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DSTFDYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DS" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062147" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELARPGASVKLSCKASGYTFTGYWMQWVQQWPGQGLEWIGIIYPRDGDTRYTQKFKGKATLTADKSYSTAFMQLWNLASKYSAVYYGARVFYDSTSVYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4987 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19761:5827 (reversed)", "sequence" : "GTCACAGGTGCAGCTGAAGGACTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCTGCCTATCCCCTGAGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 33, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 30, 37, 17, 36, 17, 36, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 34, 38, 38, 39, 38, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 33, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 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37, 38, 37, 33, 31, 33, 37, 37, 37, 37, 32, 32, 29, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGIVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRMRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "19" }, { "name" : "Source-Identity", "value" : "93.58%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGIVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRMRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.4996 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16820:5830 (reversed)", "sequence" : "ATTGGAGGTCCAACTGCAACAGTCCAAGCTGTCTGGCTCTCTTAAATTTTTGGGCCATTTATATGCCGCAGAAGCCCTCATCCCCCTCGACAGGATATCTGATGCCATTACACACTTGAACCCAGAGAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGCTGGCAAGCGCGCCCCTCAGTGCTACCCCAGTTCTGTGAACTCTGCCCGGACTGTGATGCTCTTCAACCTGGGCAGTGCCTACTGCCTGAGGAGCGAGTACGACAAGGCCCGAAAGTGTCTGCATCAGATGATCAAGCGGAAGCAGCTGCTCCCCGCAGTAAAGGCGCACTCTGATGTGAGGAAGAAGACAGTGTGCCAGCCCGTGCACCCCATCTGCCCATCCCCTGAATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 32, 32, 32, 37, 34, 32, 32, 37, 37, 37, 33, 38, 38, 38, 34, 37, 37, 34, 38, 38, 39, 39, 33, 37, 37, 39, 38, 16, 16, 16, 33, 36, 37, 38, 38, 33, 16, 37, 38, 38, 39, 39, 39, 33, 39, 39, 39, 37, 35, 36, 30, 14, 38, 14, 32, 37, 37, 37, 17, 37, 17, 17, 33, 39, 39, 30, 14, 36, 34, 32, 15, 38, 39, 15, 38, 37, 14, 15, 38, 16, 16, 14, 37, 32, 29, 30, 14, 14, 29, 36, 36, 32, 39, 37, 38, 39, 39, 37, 35, 33, 17, 29, 35, 38, 39, 37, 16, 17, 33, 35, 37, 35, 36, 37, 33, 38, 39, 39, 38, 32, 14, 36, 27, 38, 32, 37, 34, 37, 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16, 34, 36, 32, 38, 39, 38, 37, 38, 37, 36, 16, 38, 38, 37, 32, 32, 32, 35, 37, 35, 18, 37, 32, 16, 29, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 322, "max" : 393, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "QMGCTGWHTVFFLTSECAFTAGSS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 187, "max" : 237, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "SITVRAEFTELG*H*GA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 238, "max" : 321, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "CFRLII*CRHFRALSYSLLRQ*ALPRLK" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 113, "max" : 127, "direction" : "Left", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 128, "max" : 186, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.4999 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14332:5831 (reversed)", "sequence" : 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33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQNFTDKASLTVDESSSTAYMEFHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGITTDFTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 314, "direction" : "Right", "truncatedMin" : 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(reversed)", "sequence" : "AAGTCAGGTCCAGCTCCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTCATCTTGCGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 30, 32, 32, 37, 37, 37, 37, 19, 35, 37, 38, 38, 38, 33, 33, 33, 37, 38, 38, 37, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 38, 38, 39, 39, 39, 18, 35, 32, 32, 18, 37, 38, 39, 38, 39, 38, 32, 38, 37, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 20, 38, 39, 39, 33, 33, 36, 39, 38, 18, 38, 36, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 37, 38, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 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37, 33, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" 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: "translation", "value" : "ARYDGYYAAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYAAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5048 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16089:5859 (reversed)", "sequence" : "CTAAGAGGTGCAGGTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCACTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 37, 37, 37, 37, 37, 33, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDISWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "95.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5049 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12668:5860 (reversed)", "sequence" : "AGTACAGGTCCAGCTTCAGCAGTCTGGAGCCGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGATTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGTTACTACTAACTACAATGGGAGGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGAGATCATTTTGACCACTGGGGCCCAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTCCATCCCTTGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 24, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 37, 39, 39, 38, 37, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 38, 37, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 38, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 39, 38, 38, 37, 37, 38, 39, 39, 38, 39, 38, 38, 37, 37, 39, 39, 38, 39, 37, 17, 37, 39, 37, 39, 38, 38, 37, 37, 38, 30, 37, 39, 33, 39, 39, 36, 38, 38, 38, 38, 38, 38, 39, 37, 38, 38, 38, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 37, 36, 39, 38, 35, 38, 39, 38, 38, 33, 31, 38, 37, 36, 34, 39, 38, 38, 37, 39, 37, 39, 37, 37, 38, 38, 38, 38, 39, 39, 39, 38, 37, 38, 39, 39, 38, 37, 36, 37, 38, 39, 37, 38, 39, 37, 34, 38, 38, 38, 38, 37, 36, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 38, 37, 37, 36, 36, 37, 32, 33, 37, 37, 33, 32, 32, 18, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWIKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGRFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSVTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 314, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGPGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDHFDH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWIKQRPGHGLEWIGEILPGSVTTNYNGRFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARDHFDHWGPGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5051 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:26185:5860 (reversed)", "sequence" : "GCACGAGGTGAAGCTGATGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAACATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCAGACATGGTAACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCCTATCCCTTGCGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 32, 20, 18, 33, 33, 33, 38, 39, 39, 38, 39, 39, 39, 39, 18, 33, 33, 35, 37, 37, 38, 39, 39, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 33, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 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32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTIS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLVV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNSALKSRLNISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWSDGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHGNYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTISGFSLTSYGVHWVRQPP GKGLEWLVVIWSDGSTTYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAIYYCA S" }, { "name" : "IMGT_allele", "value" : "IGHV2-6-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-6-1" }, { "name" : "Videntity", "value" : "99,32% (291/293 nt)" }, { "name" : "Source-Sequence", "value" : 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33, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVRPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" 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312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVRPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5055 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14427:5862 (reversed)", "sequence" : "TTATGAGGTGCACCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCATTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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38, 38, 16, 37, 33, 32, 16, 32, 32, 35, 35, 31, 31, 32, 32, 29, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 1, "max" : 24, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNAAYLQLSSLTAEDTVVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 25, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSTTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ALYDYDGLSWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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"sequence" : "GTCGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGCGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCGGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCCTTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 35, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 37, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 33, 32, 33, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSRQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSRQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5010 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8832:5837 (reversed)", "sequence" : "AGTTGAGGTCCAGCTGCAACAGTCTGGAGCTGAGCTGGTAAGGCCGGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTCATTGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGCTTAATCCTGGAAGTGGTGGTACTAACTACAATAAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCGGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGATGGTAACTGGTTTCCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTCATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 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37, 37, 38, 38, 38, 39, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 38, 37, 37, 38, 38, 38, 38, 37, 33, 37, 34, 39, 37, 37, 38, 39, 39, 38, 34, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 38, 37, 38, 38, 37, 38, 38, 38, 37, 36, 33, 33, 33, 33, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNKKFKGKATLTADKSSGTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWFPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKASGYAFTNYFIEWVKQRPGQGLEWIGVLNPGSGGTNYNKKFKGKATLTADKSSGTAYMQLSSLTSDDSAVYFCARDGNWFPYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5011 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15550:5837 (reversed)", "sequence" : "GGTGCAGGTGCAGCTGAAGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCACCTCAGCCAAAACAACACCCCCATCTGCCCATCCCCTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 37, 39, 39, 39, 37, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNRGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHYYGYARDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5020 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9366:5841 (reversed)", "sequence" : "ATGGCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAACCTGTCCATCTCTTGCACTGTCTCTGGGTTTTTATTAAACAACTATGGTGTTCATTGGGGTCGCCAACCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATTTGGGCTGGTGGAGGCACAAATTATAATTCGACTCTCATGTCCAGACTGAGTGTCATCAAAGACAATTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTATTATTGTGTCTCAGAATTGGGGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGCCCATCCCTTGCATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 32, 35, 33, 37, 34, 34, 37, 37, 16, 32, 16, 37, 35, 38, 32, 32, 33, 32, 16, 16, 37, 32, 33, 38, 15, 15, 38, 32, 38, 16, 15, 38, 16, 37, 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"QVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5035 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21910:5852 (reversed)", "sequence" : "GTAAGAGGTGAAGCTGATGGAATCTGGAGCTGAGCTGGTGAGGCCTGGGACTTCAGTGAAGCAGTCCTGCAAGACTTCTGGATACATCTTCACCAGCTACTGGATTCACTGGGTAAAACAGAGGTCTGGGCGGGGCCTTGAGTGGATTGCAAGGATTTATCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGAAATCTGAGGACTCTGCTGTCTATTTCTGTACAAGAGCCGATAGCCCTTCTATGGGCTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCATTGAATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 33, 34, 37, 37, 34, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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36, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 37, 36, 38, 38, 37, 37, 37, 38, 39, 39, 38, 37, 39, 39, 39, 38, 39, 38, 38, 37, 36, 38, 38, 39, 38, 38, 38, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKQSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHWVKQRSGRGLEWIAR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYIFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTADKSSSTAYMQLSSLKSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGTGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRADSPSMGY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKQSCKTSGYIFTSYWIHWVKQRSGRGLEWIARIYPGTGTTYYNEKFKGKATLTADKSSSTAYMQLSSLKSEDSAVYFCTRADSPSMGYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5037 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12850:5853 (reversed)", "sequence" : "CACTGAAGTGAAGGTTGAGGAGTCTGGACCTGAGCTGATGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTTCAATGGTGCTCCTACCCACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAACTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGCTGATTACTACGGTAACAGCGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCTTATCCCTTGGCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 32, 37, 33, 37, 37, 37, 37, 37, 38, 33, 38, 38, 33, 38, 38, 37, 38, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 37, 15, 38, 39, 37, 34, 39, 39, 39, 39, 39, 39, 39, 36, 15, 32, 37, 34, 36, 36, 38, 37, 39, 39, 39, 39, 33, 37, 38, 35, 39, 37, 32, 38, 39, 39, 39, 38, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 16, 15, 38, 39, 39, 38, 33, 15, 33, 37, 39, 16, 37, 39, 39, 39, 39, 39, 36, 38, 14, 37, 35, 36, 39, 39, 39, 34, 14, 15, 33, 37, 29, 38, 39, 39, 39, 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38, 38, 38, 38, 38, 38, 35, 38, 33, 16, 16, 37, 32, 32, 32, 32, 37, 37, 32, 16, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGPELMKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "THNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPFNGAP" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARADYYGNSAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGPELMKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFNGAPTHNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARADYYGNSAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5038 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18954:5854 (reversed)", "sequence" : "AAAAGAGGTGCAGCTTCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGACTATGGTGTAAGCTGGATTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAATCACATACTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAAACTTAACTGGGACGAGGGCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 33, 37, 34, 37, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 19, 35, 33, 33, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 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"translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPEQGLEWIGGIDPYDSETHYNQKFKDKAILTVDKSSSTAYMQLSSLTSEDSAVYYCARRTNYDGYYVPYAMDYWGQGTSVPVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5122 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19880:5901 (reversed)", "sequence" : "TTATCAGGTCCAGCTGCAGCAGTCTGGAGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAAATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCATGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGATAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGAAGCCTGACATCTGAGGACTCTGCGGTCTATTACGGTGCAGGAGAAAAGGACTGGGTCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTCTATCCACTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 16, 16, 32, 37, 37, 37, 37, 16, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 16, 15, 33, 37, 38, 39, 33, 38, 39, 16, 37, 38, 39, 39, 39, 39, 16, 37, 38, 39, 39, 38, 15, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 16, 37, 39, 16, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 16, 38, 37, 38, 39, 39, 39, 39, 16, 16, 33, 29, 38, 39, 39, 39, 16, 16, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 14, 14, 37, 37, 39, 37, 39, 39, 38, 37, 36, 14, 16, 33, 38, 38, 16, 37, 15, 27, 37, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 37, 39, 39, 39, 39, 35, 15, 35, 39, 37, 37, 39, 33, 17, 35, 15, 16, 31, 16, 15, 16, 31, 35, 16, 37, 17, 17, 37, 17, 37, 16, 30, 30, 37, 35, 38, 37, 39, 39, 39, 38, 16, 35, 37, 38, 39, 36, 38, 39, 37, 39, 37, 38, 39, 16, 37, 36, 37, 39, 39, 38, 38, 13, 32, 38, 39, 34, 36, 33, 39, 38, 39, 39, 39, 39, 37, 36, 37, 39, 39, 39, 39, 39, 39, 26, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 33, 37, 37, 37, 37, 38, 38, 16, 35, 37, 16, 30, 27, 15, 15, 15, 15, 16, 16, 16, 16, 37, 33, 39, 38, 39, 37, 17, 38, 37, 16, 38, 29, 14, 33, 27, 14, 16, 33, 16, 17, 17, 27, 14, 27, 15, 14, 15, 16, 15, 16, 16, 16, 16, 33, 16, 17, 38, 29, 29, 17, 16, 16, 33, 14, 30, 14, 15, 33, 15, 16, 16, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 33, 16, 39, 39, 38, 38, 33, 14, 38, 37, 33, 16, 33, 16, 16, 39, 39, 39, 39, 33, 38, 36, 38, 39, 38, 39, 37, 38, 39, 39, 38, 37, 38, 38, 38, 37, 36, 33, 37, 36, 36, 30, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 37, 37, 37, 37, 37, 37, 37, 29, 16, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRHGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLRSLTSEDSAVYYG" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGEKDWVFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRHGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLRSLTSEDSAVYYGAGEKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5123 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15194:5901 (reversed)", "sequence" : "TTGGGAGGTGAAGGTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTACCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTCCCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATCTTTTTCTGTGGAAGACATTCGAGAGGTTACGACGGGTTTGCTAACTGGGGCCAAGGGACCCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCCAGCCCCGGACGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 34, 33, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 37, 37, 37, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 38, 38, 33, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 36, 38, 37, 38, 36, 38, 39, 39, 39, 37, 38, 39, 39, 38, 39, 39, 39, 36, 39, 36, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 38, 38, 39, 39, 19, 38, 39, 39, 38, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 37, 39, 38, 36, 37, 37, 37, 37, 37, 37, 37, 37, 27, 37, 37, 37, 37, 37, 37, 36, 39, 38, 28, 16, 38, 37, 29, 16, 37, 29, 16, 16, 16, 39, 38, 37, 27, 16, 16, 16, 39, 39, 39, 39, 38, 37, 30, 14, 38, 38, 34, 16, 31, 14, 32, 15, 15, 16, 27, 16, 27, 16, 38, 35, 39, 39, 39, 39, 39, 38, 39, 38, 33, 16, 37, 39, 37, 39, 38, 39, 38, 37, 32, 38, 34, 38, 36, 30, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 37, 33, 15, 37, 33, 14, 16, 16, 15, 14, 14, 38, 33, 14, 15, 39, 39, 38, 38, 36, 36, 36, 30, 36, 14, 15, 15, 16, 32, 33, 15, 36, 34, 37, 15, 15, 15, 29, 15, 16, 16, 16, 16, 16, 32, 32, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSTYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYPDTVKGRFTISRDNAKNTLSLQMSSLKSEDTAIFFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GRHSRGYDGFAN" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.20%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FRDYFDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "FR" }, { "name" : "IMGT_allele", "value" : "IGHD3-3*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-3" }, { "name" : "Source-Sequence", "value" : "AJ001404" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVVESGGGLVKPGGSLKLSCAASGFAFSTYDMSWVRQTPEKRLEWVAYISSGGGNTYYPDTVKGRFTISRDNAKNTLSLQMSSLKSEDTAIFFCGRHSRGYDGFANWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5124 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16143:5902 (reversed)", "sequence" : "TATAGAAGTGATGCTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCTTCACTAACTACTGGATAGGTTGGATAAAACAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACTGTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAACACAACCTACATGCATCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTTCTTACTGGGGCCAGGGGACCCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCTTATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 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"annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVMLVESGAELVRPGTSVKMSCKAA" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWIKQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADTSSNTTYMHLSSLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYCGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 311, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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}, { "name" : "translation", "value" : "EVMLVESGAELVRPGTSVKMSCKAAGYTFTNYWIGWIKQRPGHGLEWIGDIYCGGGYTNYNEKFKGKATLTADTSSNTTYMHLSSLTSEDSAIYYCAREGSYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5126 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25995:5903 (reversed)", "sequence" : "GGTTGAGGTCCAGCTGCAGCAGTCTGGGGCAGACCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGAAGGATTGATCCTGCGAGTGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATAAAGTCTCCCTGCAGCTCAGCGGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCATGATGCCCCTTTTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTTTATCCATTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 34, 38, 38, 38, 38, 38, 38, 39, 39, 39, 33, 38, 39, 38, 34, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 18, 36, 39, 37, 38, 37, 34, 15, 32, 37, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNKVSLQLSGLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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: "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" 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"EVQLQQSGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLASDDSAVYFCARVLGRPFWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5133 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22163:5909 (reversed)", "sequence" : "AGAGCAGGTTCAGCTCCAGCAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAATTTACTACGGTAGTAGCTACGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCTCATCCCCTGGTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 29, 32, 32, 30, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 37, 37, 38, 38, 38, 38, 39, 39, 19, 37, 37, 38, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 34, 37, 37, 39, 39, 39, 37, 39, 37, 39, 37, 39, 39, 39, 39, 39, 37, 37, 39, 37, 35, 39, 39, 37, 39, 39, 39, 39, 38, 39, 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}, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 34, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 39, 38, 39, 38, 39, 39, 38, 37, 39, 38, 36, 36, 38, 38, 32, 18, 38, 38, 37, 38, 39, 39, 38, 36, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 35, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGALVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MAWVRQAPGKGPEWVAF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYTDTVTGRFTISRENAKNTLYLEMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISNLAYSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARETTRGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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"ERR346596.5138 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19845:5910 (reversed)", "sequence" : "AATGGAGGTCCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTAAGTGAATATACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGAAGGGGCTGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCACTGGTGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 39, 37, 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGWYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" 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"sequence" : { "name" : "ERR346596.5146 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5924:5915 (reversed)", "sequence" : "TTAACAGATCAAGCTGCAGCAATCGGGACCTGCACAAAAGACATCTTCTCAGACTCTGTAACCGCCCCGCACTGCCACTGGCTACTCAATCAACAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAGCTAAAGTGATAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAAACAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAAAGGGACTCCGTATGGTAACTCGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTTCATCCATTGCATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 29, 29, 18, 16, 16, 33, 33, 31, 31, 33, 33, 33, 16, 33, 33, 16, 33, 34, 16, 35, 39, 15, 15, 32, 32, 15, 15, 15, 15, 15, 15, 33, 16, 15, 15, 15, 15, 14, 33, 15, 16, 16, 16, 17, 17, 17, 16, 17, 17, 33, 16, 16, 16, 32, 16, 17, 32, 17, 35, 16, 14, 32, 32, 32, 14, 29, 29, 29, 29, 29, 29, 31, 15, 33, 33, 33, 33, 34, 39, 33, 36, 38, 33, 16, 33, 33, 37, 38, 39, 16, 15, 29, 34, 33, 29, 38, 39, 38, 39, 38, 37, 38, 37, 38, 39, 39, 36, 37, 38, 37, 38, 15, 34, 16, 33, 33, 32, 30, 31, 14, 14, 33, 33, 37, 17, 17, 37, 35, 33, 14, 27, 31, 37, 38, 37, 37, 14, 16, 37, 38, 15, 27, 30, 27, 14, 14, 16, 38, 38, 37, 33, 27, 15, 33, 16, 26, 27, 37, 16, 27, 29, 16, 2, 28, 13, 37, 37, 34, 26, 15, 34, 15, 35, 34, 34, 38, 33, 34, 28, 27, 34, 38, 37, 37, 26, 15, 25, 32, 26, 15, 25, 26, 26, 38, 38, 38, 38, 24, 34, 38, 37, 36, 15, 35, 27, 38, 38, 15, 15, 27, 27, 35, 30, 15, 27, 16, 37, 2, 25, 38, 37, 27, 36, 37, 37, 16, 24, 25, 27, 29, 33, 3, 33, 27, 15, 33, 27, 15, 38, 36, 37, 39, 39, 35, 33, 29, 35, 37, 16, 37, 16, 16, 37, 38, 39, 39, 38, 29, 35, 31, 37, 35, 39, 37, 35, 37, 17, 33, 38, 29, 37, 37, 37, 15, 38, 37, 35, 38, 37, 37, 17, 17, 35, 35, 37, 36, 39, 37, 39, 37, 35, 38, 37, 38, 16, 37, 16, 15, 29, 30, 14, 14, 37, 15, 38, 33, 37, 16, 17, 17, 37, 36, 34, 37, 34, 38, 37, 34, 31, 31, 33, 35, 37, 16, 32, 36, 34, 39, 37, 37, 16, 36, 37, 39, 38, 38, 38, 37, 37, 32, 15, 34, 33, 37, 32, 37, 16, 15, 33, 15, 36, 38, 35, 33, 37, 37, 37, 38, 39, 38, 39, 37, 36, 32, 32, 33, 16, 15, 32, 32, 38, 34, 38, 34, 37, 36, 33, 37, 18, 37, 38, 33, 16, 16, 31, 33, 37, 37, 37, 35, 16, 29, 16, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "QIKLQQSGPAQKTSSQTL*PPRTAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSINSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKKQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IS*SDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKGTPYGNSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQF PGNKLEWMGYMSYSGSTRYNPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-2*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-2" }, { "name" : "Videntity", "value" : "96,93% (284/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19894; J03832" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QIKLQQSGPAQKTSSQTL*PPRTATGYSINSDYAWNWIRQFPGNKLEWMGYIS*SDSTSYNPSLKSRISITRDTSKKQFFLQLNSVTTEDTATYYCAKGTPYGNSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5147 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16256:5915 (reversed)", "sequence" : "TGGAGAGGTTCAGCTCCAGCAGTCTGCAGCTGAACTGGCAAGACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCCACACGATGTTTTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGATATACTGACTACAATCAGAAGTTGAAGGACAAGACCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGAAACTGATCAGCCTGACATCTGAGGACTCCGCGGTCTATTACTGTGCAAGAGAAGGGGATTACCTCGGCTACGGAGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 38, 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38, 38, 38, 33, 33, 33, 35, 33, 35, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSAAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWIKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSHT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNQKLKDKTTLTADKSSSTAYMKLISLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSSGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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(280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "91.67%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RE" }, { "name" : "IMGT_allele", "value" : "IGHD5-24*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-24" }, { "name" : "Source-Sequence", "value" : "AF174035" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSAAELARPGASVKMSCKASGYTFTSHTMFWIKQRPGQGLEWIGYINPSSGYTDYNQKLKDKTTLTADKSSSTAYMKLISLTSEDSAVYYCAREGDYLGYGDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5149 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11538:5915 (reversed)", "sequence" : "TAGACAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCTCATCCATTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 32, 32, 20, 37, 33, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 35, 36, 38, 38, 38, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 39, 38, 37, 37, 38, 39, 33, 39, 38, 39, 39, 39, 39, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 32, 32, 36, 37, 37, 38, 39, 36, 39, 39, 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"GGTGGAGGTGCAGCTTCAGGAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATTTTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTATAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCGTGACCGCTGAGGATTCTGGTGTATGTTTCTATGCATGGGGGGGTAGTAGGGTTCGAGGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCTCATCCATTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 29, 29, 16, 32, 32, 32, 32, 32, 37, 37, 38, 38, 38, 33, 38, 38, 38, 16, 33, 37, 39, 39, 39, 39, 39, 16, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 16, 16, 33, 38, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 15, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 16, 16, 37, 17, 37, 39, 39, 39, 38, 37, 39, 39, 17, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 37, 39, 39, 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38, 16, 37, 37, 34, 37, 34, 16, 16, 37, 29, 16, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVKQRPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTIDKSSSTAYMQLSSVTAEDSGVCFY" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IFPGTGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AWGGSRVRGYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.45%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 301, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGPLYWYFDLWGRGTLVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD3-16*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-16" }, { "name" : "Source-Sequence", "value" : "AF062099" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGAELVKPGASVKLSCKTSGYTFTSYWIQWVKQRPGQGLGWIGEIFPGTGTTYYNEKFKGKATLTIDKSSSTAYMQLSSVTAEDSGVCFYAWGGSRVRGYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5286 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21564:5986 (reversed)", "sequence" : "TATCGAGGTGAAGCTGGTGGAATCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTATATATATTGGCTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTAATTACTCCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCGAGGTCGAGAATAAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCTGCCCATCCCTTGCACG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 32, 32, 35, 32, 32, 37, 37, 38, 38, 38, 38, 38, 16, 37, 36, 38, 16, 37, 39, 39, 39, 39, 37, 38, 30, 15, 36, 14, 14, 32, 38, 32, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 15, 33, 14, 14, 36, 39, 37, 32, 38, 39, 39, 39, 16, 37, 38, 34, 38, 39, 39, 39, 39, 35, 37, 37, 35, 38, 39, 34, 38, 39, 39, 39, 39, 39, 39, 37, 39, 33, 38, 38, 39, 39, 39, 38, 33, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 33, 38, 39, 33, 29, 14, 36, 36, 38, 39, 36, 36, 39, 39, 34, 38, 14, 29, 33, 37, 39, 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38, 38, 38, 37, 33, 33, 33, 37, 37, 33, 32, 32, 29, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYWLRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISDGGNYS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSRIRYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDYYIYWLRQTPEKRLEWVATISDGGNYSYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSRIRYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5288 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11294:5987 (reversed)", "sequence" : "CGTACAGGTTCAGCTGCAGCAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGCTTGGAAATATTTATCCTGGTACTGGTAGTATTGACTACGATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGATCGGGGTATGTTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTTCATCCATTGAGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 32, 31, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 33, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 17, 31, 38, 39, 39, 39, 33, 39, 39, 18, 35, 38, 39, 39, 39, 39, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 33, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 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"AATAGAGGTGAACCTGGTGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGCTTTTATTAGTAACAAAGCTATTGGTTACACAACAGAGTACAGTGTATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCAATCTTCAAATCAACACCCTGAGAACTGAGGACAGTGCCGCCTATTACTGTGCAAGAGACGGTAGTAGCTTCTACTGGTACTTCGATGACTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCACTGTTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 29, 32, 30, 32, 37, 37, 37, 37, 30, 16, 33, 33, 38, 38, 38, 16, 16, 37, 16, 37, 16, 33, 38, 38, 39, 39, 33, 38, 15, 15, 36, 15, 32, 15, 33, 32, 36, 39, 16, 35, 38, 39, 39, 39, 39, 39, 39, 38, 38, 34, 36, 36, 39, 16, 17, 37, 37, 38, 16, 16, 16, 33, 16, 37, 39, 39, 39, 39, 16, 33, 38, 39, 33, 38, 39, 39, 39, 39, 39, 38, 15, 38, 37, 39, 38, 38, 39, 39, 39, 34, 39, 39, 33, 37, 38, 17, 38, 36, 37, 39, 39, 16, 37, 38, 37, 33, 16, 38, 38, 39, 39, 38, 39, 36, 38, 34, 14, 36, 38, 38, 37, 14, 34, 39, 39, 15, 37, 37, 36, 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] } ] }, { "sequence" : { "name" : "ERR346596.5303 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25277:5996 (reversed)", "sequence" : "ATGAGAGGTGCAGCGGGAGGAGTCTGGGACTGTGCTGGCAAGGCCAGGGGCTTCATTGAGGATGTCCTGCAAGGCTTCTGGCTACTCCTTTACCAACTATTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAATGATGCCAAATACACCCAGAAGTTCAAGGCCAAGGCCAAACTGACTGCAGTCACATCCACCAGCACTGCCGACATGGAACTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTGCAAGAAACTGGGCCTGGGTGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGCTCATCCCTTGATTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 31, 16, 35, 37, 32, 37, 32, 37, 37, 38, 38, 16, 36, 15, 15, 32, 36, 36, 38, 39, 39, 37, 39, 39, 34, 34, 39, 38, 39, 35, 35, 38, 39, 16, 38, 14, 15, 16, 14, 37, 39, 39, 36, 37, 14, 14, 14, 32, 36, 32, 15, 16, 33, 37, 39, 16, 16, 15, 37, 37, 16, 33, 38, 37, 39, 37, 38, 39, 39, 33, 37, 14, 16, 33, 38, 39, 39, 39, 36, 38, 16, 33, 16, 33, 38, 37, 39, 37, 38, 39, 16, 33, 33, 36, 37, 38, 17, 29, 38, 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37, 36, 17, 17, 35, 16, 38, 15, 38, 38, 33, 37, 36, 36, 32, 34, 34, 38, 36, 15, 32, 30, 36, 38, 32, 16, 36, 37, 32, 32, 37, 16, 37, 37, 32, 29, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQREESGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "IYPGNNDA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNWAWVFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "52" }, { "name" : "Source-Identity", "value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQREESGTVLARPGASLRMSCKASGYSFTNYWINWIKQRPGQGLEWIGAIYPGNNDAKYTQKFKAKAKLTAVTSTSTADMELSSLTNEDSAVYYCARNWAWVFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5094 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10667:5887 (reversed)", "sequence" : "CTAGGAGGTGCAGCTTCAGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCATTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTAACATCCACTTTGCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAATTCCCTGATCCTGCAAATGACCAGTCTCAGGTCTGAGGACACGGCCATGTATTACTGTGTAAGAGGGGAACTGGGACGTCGATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCCCTGGTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 34, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 17, 36, 34, 38, 37, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 36, 38, 37, 38, 38, 39, 39, 38, 38, 38, 38, 38, 30, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 37, 36, 39, 39, 39, 37, 18, 37, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 38, 37, 39, 39, 38, 33, 39, 38, 38, 39, 37, 39, 39, 38, 34, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 38, 36, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 38, 39, 38, 39, 36, 39, 39, 26, 15, 25, 34, 34, 33, 37, 37, 38, 39, 39, 38, 38, 38, 37, 38, 37, 25, 34, 39, 37, 33, 37, 37, 38, 37, 38, 38, 38, 38, 38, 37, 33, 34, 32, 34, 38, 38, 38, 33, 33, 24, 33, 39, 39, 39, 38, 37, 37, 38, 38, 38, 37, 34, 37, 37, 39, 39, 39, 39, 39, 39, 38, 37, 38, 33, 39, 37, 37, 38, 32, 39, 39, 38, 37, 37, 39, 39, 38, 39, 36, 39, 36, 39, 38, 37, 16, 38, 36, 37, 39, 36, 39, 37, 39, 38, 39, 38, 39, 39, 39, 38, 34, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 36, 37, 36, 36, 27, 38, 39, 38, 39, 37, 39, 38, 36, 38, 33, 39, 39, 39, 38, 39, 39, 37, 39, 38, 19, 37, 39, 38, 39, 39, 38, 37, 37, 38, 37, 38, 38, 39, 38, 39, 38, 35, 17, 37, 38, 39, 38, 39, 37, 39, 38, 39, 38, 38, 35, 38, 39, 38, 38, 37, 37, 33, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 36, 38, 38, 39, 38, 38, 38, 34, 36, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HFADTVKGRFTISRDNPKNSLILQMTSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ISSGSSNI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRGELGRRYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 324, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSNIHFADTVKGRFTISRDNPKNSLILQMTSLRSEDTAMYYCVRGELGRRYYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5096 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21550:5888 (reversed)", "sequence" : "GTTAGACGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGCAACCTGGAGAGTCCCTGAAACTCTCCTGTGAATCCAATGAATACGAATTCCCTTCCCATGACATGTCTTGGGTCCGCAAGACTCCGGAGAAGAGGCTGGCGTTGGTCGCAGCCATTAATAGTGATGGTGGTAGCACCTACTATCCAGACACCATGGAGAGACGATTCATCATCTCCAGAGACAATACCAAGAAGACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGCGGACACAGCCTTGTATTACTATCCAAGACATTAAGACAGCTCGGGCTACGTGAGATATTACTATGCTATGGACTGCTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCATTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33, 38, 36, 38, 38, 37, 36, 37, 36, 38, 32, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 31, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 36, 37, 37, 39, 38, 39, 39, 39, 38, 38, 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39, 39, 36, 32, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 38, 38, 38, 38, 38, 37, 34, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 31, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGESLKLSCESN" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "MSWVRKTPEKRLALVAA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EYEFPSHD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYPDTMERRFIISRDNTKKTLYLQMSSLRSADTALYYY" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INSDGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "PRH*DSSGYVRYYYAMDC" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "46" }, { "name" : "Source-Identity", "value" : "84.46%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 326, "max" : 333, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGESLKLSCESNEYEFPSHDMSWVRKTPEKRLALVAAINSDGGSTYYPDTMERRFIISRDNTKKTLYLQMSSLRSADTALYYYPRH*DSSGYVRYYYAMDCWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5097 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:26081:5889 (reversed)", "sequence" : "AAACCAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCGAGGCTTCTGGATACACCTTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTGTTACTGTACAAGAAGATCTACTATGACCACGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKMSCEAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MKWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVCYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRSTMTTFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : 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"GGATGATGTGCAGCTTCAGGAGTCGGGACCTGGCCTGGTGAAACCTTCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAGTGATTATGCCTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATAAGCTACAGTGGTAGCACTAGCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATCGTGGTTACGACGAGGATTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGTTCATCCCCTGAGTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 37, 39, 18, 31, 38, 37, 37, 38, 38, 39, 37, 38, 39, 39, 39, 36, 35, 39, 39, 37, 39, 37, 33, 18, 33, 37, 37, 37, 37, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 37, 39, 39, 37, 38, 37, 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33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGPGLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WNWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LSDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVFS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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}, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATLSDGGGYTYYPDSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5115 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18891:5898 (reversed)", "sequence" : "TGTGCAGGTTCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTACCTACTGGATACACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTAATACTGAGTACAATCAGAAGTTCAGGGACAGGGCCACATTGACTGCAGACAAATCCTCCAGCACACCCTACATGCAACTGAGCAGCCTGACCTCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATTACGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 37, 38, 39, 39, 39, 39, 39, 39, 34, 36, 37, 37, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 37, 34, 36, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"AGCGGAGGTGCAACTGGCGGAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGTTATCCTGCAAGGCTACTGGCTACACATTTAGTAGCTACTGTATAGAGTGGGTAAAACAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGGGATTTTACCTGGAAGTGGTAGTACTAACTATAATGAGAAGTTCAAGGGCAAGGCCACTATCACTGCAGATTCATCCTCCAACACAGCCTACATGCAACTCAACAGCCTGACATCTGAGGACACTACCGTCTATTACTGTGCAAGAGGGTATGCAATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCCTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 30, 32, 16, 35, 35, 35, 32, 16, 37, 37, 16, 36, 38, 37, 15, 15, 32, 32, 32, 15, 33, 37, 37, 36, 39, 16, 38, 38, 34, 38, 37, 15, 38, 38, 16, 16, 33, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 17, 37, 39, 38, 17, 35, 17, 35, 33, 37, 38, 39, 37, 38, 38, 33, 37, 39, 39, 16, 33, 37, 38, 39, 39, 39, 16, 33, 38, 38, 38, 34, 37, 17, 37, 17, 33, 17, 17, 37, 37, 35, 38, 37, 16, 17, 33, 33, 17, 29, 33, 16, 37, 38, 38, 39, 38, 33, 36, 39, 38, 39, 39, 39, 39, 38, 38, 38, 36, 39, 38, 32, 34, 38, 39, 37, 39, 39, 38, 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"chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLAESGAELMKPGASVKLSCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYC" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "NYNEKFKGKATITADSSSNTAYMQLNSLTSEDTTVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"EVQLAESGAELMKPGASVKLSCKATGYTFSSYCIEWVKQRPGHGLEWIGGILPGSGSTNYNEKFKGKATITADSSSNTAYMQLNSLTSEDTTVYYCARGYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5246 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23772:5966 (reversed)", "sequence" : "GGATCAGGTGCAGCTGAAGGAGTCTGGACCTTACCTGGTGAAGCCTGGGGCTTCAGTGAAGATTTCCTGCAAGACTTCTGGATACATATTCACTGACTACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTGTTAATCCTAACAGTGGTGCTGGTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTAACATCTGAGGATTCTGCAGTCTATTACTGTGCAAAATAAATTTATAACGACTATTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCCATCCCCTGCATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 32, 32, 31, 16, 29, 35, 33, 37, 37, 16, 16, 36, 37, 37, 38, 33, 38, 38, 33, 16, 37, 36, 38, 38, 18, 32, 37, 15, 33, 15, 16, 38, 16, 37, 37, 33, 37, 33, 38, 37, 16, 35, 37, 15, 16, 37, 34, 36, 36, 34, 36, 34, 33, 38, 38, 37, 38, 37, 35, 36, 36, 37, 35, 37, 35, 39, 39, 39, 38, 39, 36, 38, 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38, 36, 33, 16, 14, 32, 36, 38, 37, 37, 16, 38, 17, 35, 16, 33, 16, 14, 36, 32, 16, 14, 37, 33, 14, 33, 16, 14, 37, 36, 38, 15, 37, 39, 39, 38, 33, 15, 15, 30, 38, 34, 37, 37, 37, 32, 15, 32, 36, 16, 34, 32, 30, 35, 35, 37, 35, 35, 30, 29, 16, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPYLVKPGASVKISCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGG" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYIFTDYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VNPNSGAG" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AK*IYNDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "24" }, { "name" : "Source-Identity", "value" : "91.84%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.68%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPYLVKPGASVKISCKTSGYIFTDYTMHWVKQSHGKSLEWIGGVNPNSGAGTYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCAK*IYNDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5248 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16751:5968 (reversed)", "sequence" : "TCTCCAGGTCCAACTGCAGCAGCCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTACCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAGGACGGCTATTGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 18, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 37, 33, 37, 38, 38, 39, 36, 39, 39, 39, 39, 38, 38, 37, 37, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 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"AGATGACGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCGGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTATCTGCAAATGAGTAGTCTAAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTTCTCAGCCAAAACGACACCCCCATCAGCCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 33, 33, 37, 37, 33, 33, 33, 32, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 35, 38, 38, 39, 39, 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39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRPEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRVLTVYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "96.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRPEDSATYYCARDRVLTVYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5258 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9576:5972 (reversed)", "sequence" : "TAGTCAGGTCCAACTCCAGCAGCCTGGACCTGAGCTGGTGAAGCCTGGAGCTTCAATGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACACCATGAACTGGGTGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTAATCCTTACAATGGTGGTACTAGGTACAACCAGAAGTTCAAGGGCAAGGCCACATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGTCCCCCTCTCTACTATGATTACGGATTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGTTTATCCACTGTCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGPPLYYDYGFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 368, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTRYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARGPPLYYDYGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5259 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:26123:5972 (reversed)", "sequence" : "GCGGGAAGTGAAGTTGGTGGAGTCAGGACTTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGGCGGGAGGGTAACCACGCTGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCCCATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 35, 29, 32, 37, 37, 37, 37, 38, 18, 33, 36, 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37, 39, 37, 37, 35, 38, 30, 37, 30, 27, 30, 38, 37, 16, 31, 39, 37, 38, 37, 35, 31, 31, 37, 27, 16, 37, 33, 39, 34, 34, 34, 27, 14, 14, 34, 38, 33, 27, 16, 16, 37, 37, 30, 30, 27, 30, 38, 38, 37, 37, 14, 37, 37, 14, 30, 15, 38, 38, 33, 39, 39, 38, 38, 37, 36, 36, 14, 39, 36, 39, 39, 38, 16, 33, 16, 16, 38, 37, 36, 38, 37, 16, 38, 33, 38, 37, 37, 15, 33, 29, 15, 32, 38, 37, 33, 14, 32, 38, 33, 34, 38, 37, 32, 36, 32, 14, 34, 36, 30, 36, 34, 38, 39, 36, 37, 36, 32, 36, 15, 38, 38, 32, 16, 32, 32, 35, 32, 16, 16, 35, 32, 16, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGLDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARREGNHAAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : 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"GCAAGAGGTGAAGCTGATGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGCATGTCTTGGGTTCGCTAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGTATGGTAAAATAACCCGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGCTTATCCATTGTGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 34, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 35, 38, 39, 37, 38, 39, 39, 39, 37, 39, 38, 39, 37, 39, 39, 34, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 34, 38, 38, 38, 39, 37, 39, 39, 39, 38, 39, 38, 38, 39, 39, 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: "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGAELLKPGTSVKLSCKASGYTFTRYWMHWVKQRPGQGLEWIGELNPSNGHTNYNGKFKNKATVTVDKSSSTAYMQLSSLTSEDSAVYYCARMITTRGFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5075 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7906:5875 (reversed)", "sequence" : "TGAGGAGGTCCAACTGCAACAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGGGTGGATTGGAGAGATATTTCCTGGAACTGGCACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTGCAAGGGAGGGTAGTAGGCTACGAGGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCACTGGAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 38, 37, 39, 38, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 34, 37, 38, 39, 37, 39, 38, 39, 33, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 38, 37, 35, 39, 39, 38, 38, 38, 38, 38, 37, 39, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 36, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 38, 39, 39, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 33, 38, 37, 39, 37, 36, 37, 36, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 36, 32, 36, 36, 35, 36, 37, 16, 36, 34, 38, 39, 38, 38, 39, 39, 36, 34, 39, 39, 39, 38, 39, 36, 36, 36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 37, 37, 35, 38, 37, 31, 35, 37, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVKQRPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEKFKGKATLTIDTSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IFPGTGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGSRLRGYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.43%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKTSGYTFTSYWIQWVKQRPGQGLGWIGEIFPGTGTTYYNEKFKGKATLTIDTSSSTAYMQLSSLTSEDSAVYFCAREGSRLRGYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5076 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8696:5875 (reversed)", "sequence" : "AAATGAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTCTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCAATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCCTGATAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 18, 29, 32, 32, 33, 37, 37, 37, 37, 37, 37, 37, 34, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 17, 30, 36, 30, 36, 34, 38, 38, 39, 39, 39, 39, 38, 37, 38, 39, 37, 38, 38, 37, 38, 37, 38, 38, 39, 38, 39, 39, 39, 37, 34, 38, 35, 39, 39, 39, 39, 39, 39, 39, 35, 34, 38, 35, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 19, 37, 19, 37, 38, 37, 39, 33, 31, 37, 33, 36, 37, 31, 37, 38, 35, 18, 37, 37, 39, 39, 37, 39, 39, 38, 30, 39, 18, 38, 39, 39, 36, 38, 14, 36, 15, 30, 37, 38, 37, 36, 34, 30, 27, 34, 34, 15, 34, 38, 14, 32, 38, 37, 35, 15, 38, 38, 32, 37, 32, 36, 37, 34, 34, 35, 38, 38, 39, 38, 39, 35, 37, 37, 37, 24, 37, 35, 38, 33, 35, 35, 32, 37, 37, 26, 35, 35, 38, 35, 38, 39, 34, 15, 38, 39, 39, 39, 39, 25, 15, 37, 37, 37, 37, 37, 37, 37, 34, 38, 37, 39, 37, 39, 38, 34, 31, 33, 33, 26, 31, 36, 37, 39, 39, 23, 26, 34, 37, 33, 37, 38, 34, 33, 38, 36, 38, 37, 37, 37, 37, 37, 37, 38, 38, 38, 36, 37, 37, 37, 38, 37, 39, 38, 35, 27, 26, 33, 37, 37, 25, 37, 37, 37, 37, 38, 37, 37, 16, 37, 16, 30, 16, 16, 16, 31, 16, 17, 37, 38, 31, 16, 16, 16, 33, 37, 39, 38, 37, 27, 37, 15, 15, 15, 35, 29, 27, 29, 37, 37, 33, 38, 27, 37, 16, 16, 27, 16, 38, 38, 27, 14, 36, 30, 38, 38, 15, 33, 16, 36, 35, 35, 37, 17, 39, 39, 37, 30, 14, 34, 30, 16, 16, 33, 17, 16, 38, 38, 39, 39, 38, 39, 38, 36, 37, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 39, 39, 37, 38, 39, 38, 34, 34, 37, 36, 36, 37, 38, 38, 32, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 14, 37, 36, 38, 38, 37, 39, 37, 37, 38, 16, 37, 16, 37, 33, 16, 16, 32, 32, 35, 37, 37, 37, 37, 32, 29, 16, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWSRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LGMGAFDFWGHGTMVTVSS" }, { "name" : "translation", "value" : "LG" }, { "name" : "IMGT_allele", "value" : "IGHD7-27*01" }, { "name" : "IMGT_gene", "value" : "IGHD7-27" }, { "name" : "Source-Sequence", "value" : "AF103795" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSDFYMFWSRQTPEKRLEWVATISDGGTYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5077 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15032:5876 (reversed)", "sequence" : "CGGGCAGGTTCAACTGCAGCAGTCTGGGTCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAAAATTTATGCTGGTAGTGGTAGAATTAATTACGATGAAAAGTTCAAGACCAAGGTCACACTGACTGTAGACACATCTTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGAAAATTCATTACTACGGCTACCCTATCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCGAAACAACAGCCCCATCTGCCCATCCCTTGATAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 32, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 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39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 36, 37, 33, 33, 37, 37, 37, 37, 33, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGK" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYDEKFKTKVTLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYAGSGRI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRENSLLRLPYPWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGSELVRPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGKIYAGSGRINYDEKFKTKVTLTVDTSSSTAYMQLSSLTSEDSAVYYCTRENSLLRLPYPWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5078 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10604:5878 (reversed)", "sequence" : "AGTAGAGGTGAACCTGGTGGAATCTGGATGATTCAGAGCCGACAGACCTGGCATGGAGCCTGCCTGGCAGGGAAGGGGGTTGAGCATATTCTGACTTGCTTTTCCCATCCCATTTCTGGGGCAGAGCCAGTAGCCTAAATTTACCCCTAACTCAGGGTGTTTCCCGTGGGTGACCTAAGAGTGAGCATCAAGTCCTGGGTTGGAACTCAGAAGTGATCTGGAATTGAGATGGAGCACCCCCTAGCCCTGCAGCCTTCCTTAACGCCCAACAACTCCCGGGGACCTACAGACACCCCTTTTTCTAGGTCGCTACCCCTTCGTTTACAGCTTCCTTCTCTCTTCATCACAGCCTGGTTTACATTACCCCCTCCCCCCCCATCGGTCTATCCCCTGCGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 20, 38, 38, 39, 39, 38, 38, 38, 36, 36, 37, 37, 36, 38, 39, 39, 39, 34, 18, 33, 33, 18, 37, 38, 38, 39, 37, 32, 38, 39, 39, 36, 32, 38, 38, 38, 34, 38, 37, 30, 36, 34, 34, 36, 36, 37, 14, 18, 38, 37, 39, 39, 38, 39, 39, 38, 39, 38, 36, 38, 18, 19, 36, 39, 39, 37, 33, 37, 38, 35, 38, 39, 37, 39, 37, 36, 37, 39, 39, 39, 39, 38, 36, 35, 34, 31, 35, 34, 32, 38, 38, 33, 38, 37, 32, 38, 37, 39, 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35, 32, 32, 32, 32, 30 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 76, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVNLVESG*FRADRPGMEPAWQGR" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 190, "max" : 240, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KSWVGTQK*SGIEMEHP" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 77, "max" : 189, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 289, "max" : 303, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "startMotifDifferences", "value" : "2" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 241, "max" : 288, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "LALQPSLTPNNSRGPT" } ] } ] }, { "sequence" : { "name" : "ERR346596.5079 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18163:5879 (reversed)", "sequence" : "AGGGGAGGTGATGTTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTGCAGTGAATGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAACTATTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTGCTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGATTTGGACGATACTACTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCCATCCCCTGGCCC", "circular" : false, "sequenceType" : 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"FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFGRYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVRPGTAVNVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGANYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARFGRYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5080 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10808:5879 (reversed)", "sequence" : "TGTGGAGGTGAAGCTTCAGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTGCTGGATACACCTTCACTAACTACTGGATAGGTTGGGTAGCGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTAATTGTGGAGGTGGTTATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAGAGAGGGTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTTTATCCACTGTTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 34, 34, 32, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 38, 38, 30, 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38, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVKLQESGAELVRPGTSVKMSCKAA" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IGWVAQRPGHGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" 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38, 37, 19, 31, 33, 37, 37, 37, 37, 32, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVRPGVSVKISCEGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDGYYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVRPGVSVKISCEGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5207 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32, 39, 39, 39, 39, 38, 38, 38, 36, 36, 36, 30, 32, 37, 36, 32, 32, 36, 37, 38, 38, 37, 37, 38, 32, 32, 31, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLRLSCTTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQSPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNPSVKGRFTISRDNSQGILYLQMNTLRAEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKPNGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYSGYFDF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.45%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLRLSCTTSGFTFTDYFMTWVRQSPGKALEWLGFIRNKPNGYTTEYNPSVKGRFTISRDNSQGILYLQMNTLRAEDSAIYYCARDYSGYFDFWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5208 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"ERR346596.5212 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23329:5948 (reversed)", "sequence" : "GAAGGAGGTGCAGCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGGGGACGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAAACAACAGCCCCATCTGTCCATCCCCTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 36, 32, 36, 32, 36, 35, 39, 37, 38, 37, 17, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKRGYGKEGHYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" 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: [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKISCKASGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCAKRGYGKEGHYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5226 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17800:5954 (reversed)", "sequence" : "GCTTGAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTTCCTATTACTACGGTAGTAGCTCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTTCATCCCTTGTGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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17, 38, 38, 38, 38, 38, 39, 38, 38, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 31, 33, 37, 37, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSSFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "5" }, { "name" : "Source-Identity", "value" : "98.30%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.65%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5227 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13704:5954 (reversed)", "sequence" : "CGATGAGGTGAAGTTGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGTATGGTAAAATAACCCGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCCTTGCATC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 33, 37, 37, 38, 32, 37, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 38, 14, 29, 38, 38, 39, 39, 39, 38, 39, 38, 36, 38, 39, 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"CAGGGAGGTGAAGCTGATGGAGTCTGGGGGAGACTTAGTGGAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGAAATTACTACGGCTCCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCACTGCGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 29, 32, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 34, 36, 37, 38, 35, 39, 39, 37, 38, 39, 39, 39, 37, 39, 38, 38, 39, 39, 39, 33, 38, 36, 37, 38, 39, 39, 34, 38, 38, 39, 39, 37, 38, 37, 37, 38, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 36, 36, 39, 39, 39, 35, 33, 19, 37, 39, 39, 39, 38, 38, 37, 38, 38, 38, 38, 38, 37, 37, 34, 39, 39, 36, 39, 37, 37, 37, 38, 38, 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33, 38, 38, 37, 37, 37, 37, 32, 33, 33, 33, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGGDLVEPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNYYGSWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "11" }, { "name" : "Source-Identity", "value" : "96.26%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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"AGTAGAGGTGCAGCTTCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATCTCCTGCACAGGTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTCCAATGGGAGGTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAGATCTGCATACTACGGTAGTAGTTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCTATCCCCTGTAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 35, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 34, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 35, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 31, 38, 39, 39, 37, 39, 39, 39, 39, 39, 33, 37, 38, 39, 39, 38, 37, 38, 39, 38, 38, 36, 36, 38, 38, 39, 37, 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38, 38, 38, 38, 39, 38, 38, 38, 37, 38, 33, 38, 38, 38, 38, 33, 33, 33, 33, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCTGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSAYYGSSYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : 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305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKISCTGSGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFCARSAYYGSSYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5232 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:16650:5956 (reversed)", "sequence" : "GAATGAAGTGAAGCTTGAGGAGTCTGGAGCTGGGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAGTCGTATGGTAACTATTTGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCACTGCTCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 32, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 35, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"EVQVVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARPSYYGHTMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5235 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11267:5957 (reversed)", "sequence" : "CTGCGAAGTGAAGGTTGAGGAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTACGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGAACTACTATGATTACGACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCCTGGTCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGNYYDYDYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC 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37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASLRMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQWPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" 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(292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPASGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5169 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20466:5927 (reversed)", "sequence" : "GCGACAGGTTCAACTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGATCGGGGAGGTACGACGTGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 30, 35, 33, 33, 37, 37, 37, 37, 33, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 37, 38, 38, 37, 37, 39, 39, 39, 39, 37, 39, 38, 38, 34, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 37, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 33, 37, 39, 39, 37, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 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34, 37, 37, 32, 32, 35, 35, 35, 32, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "FYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : 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"sequence" : "AGTTGAGGTTCAGCTTCAGCAGTCCATCGCTTGCGTCGGGTAGGCAGGGCCCACAGCCGAATTCCAGTCACCGGCATCTGGCTCCAACATCGAAGTCACCTATATGCAATGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGTCCCGACCTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCATCACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGTTCTTGTAAATAGGTACGGCGAGCTCCGAGCTCTTCACTCTTACCCTACACGACGCTCTTCCGATCTTTTTGAGCTTCAGCTTCATCAGCCCATCCATTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 16, 16, 16, 29, 29, 37, 37, 37, 37, 16, 35, 37, 38, 38, 38, 16, 37, 38, 38, 37, 38, 38, 39, 39, 16, 18, 18, 16, 15, 15, 15, 15, 15, 15, 15, 33, 15, 15, 14, 14, 14, 32, 37, 14, 16, 33, 33, 14, 32, 14, 14, 32, 14, 33, 14, 32, 14, 14, 14, 29, 14, 14, 33, 16, 16, 31, 16, 33, 16, 16, 16, 31, 14, 14, 29, 14, 14, 33, 16, 16, 16, 33, 38, 16, 14, 16, 16, 16, 14, 15, 33, 14, 15, 33, 14, 14, 33, 17, 16, 33, 37, 16, 16, 37, 17, 17, 17, 33, 16, 17, 27, 16, 15, 33, 32, 34, 37, 39, 33, 16, 38, 38, 36, 36, 37, 36, 39, 38, 38, 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18, 38, 37, 32, 32, 16, 37, 16, 37, 37, 37, 37, 37, 35, 16, 16, 35, 29, 29, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "EVQLQQSIACVG*AGPTAEFQSPAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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39, 38, 36, 37, 36, 38, 35, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSDTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFPFYYGSSFYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 327, "max" : 374, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGDDLVKPGASVKLSCKASGYSFTSYWINWIKQRPGQGLEWIGRIAPGSDTTYYNEMFKGKATLTVDTSSTTAYIQLSSLSSEDSAVYFCARFPFYYGSSFYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5188 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25068:5937 (reversed)", "sequence" : "CCCACAGGTTAAACTGCAGCAGTCTGGGCCTGAACTGGCAACACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTACCTACTGGATGCACTGGATAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATCCATTAATCCTAACACTGACTATACTGACTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCATCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGGATTACGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGCCTATCCATTGGCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 37, 33, 37, 35, 37, 37, 38, 38, 38, 20, 38, 38, 38, 38, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 38, 39, 39, 39, 33, 37, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 37, 38, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 37, 38, 39, 38, 39, 37, 39, 38, 38, 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", 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"IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKRRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYLYGYTATFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5199 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24446:5941 (reversed)", "sequence" : "ATGGGAGGTGCAGCTGCAGCAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGACTAGAATGGATTGGAGAAATTAATCCAGATAGCAGGACGATAAACTATAAGCCATCTCTAAAGGAGAAATTCATCATGTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGCGCAAGAAATGGTTACTACGGCTGGATGACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTTTATCCCTTGAAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 38, 36, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 18, 37, 39, 38, 38, 39, 39, 16, 35, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 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39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDSRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWMTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" 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"ACCCCAGGTCCAGCTTCAGCAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATAGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGTCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGACACAAGTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCACTGAAAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 33, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 39, 37, 38, 38, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIG*" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVRISCKASGYTFTSYYIHWVKQRPGQGLEWIG*IYPGNVNTKYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYFCARHKWAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5321 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22786:6006 (reversed)", "sequence" : "TCCTCAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAAGGGGCTATAGGTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCGAAACGACACCCCCATCAGCTATCCACTGCGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 38, 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35, 39, 39, 38, 19, 34, 38, 38, 38, 34, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGPGLVAPPQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" 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"type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRHGGYYPYYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP 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"GGCCCAGGTCCAACTGCAGCAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTTAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTGCCTGGAAGTGGTAGTACTCACTACCATGAGAAGTTCAAGGACACGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGGGGGGTATGATACCTCCATTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCCTATCCCCTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 32, 37, 37, 37, 37, 37, 38, 38, 37, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 33, 33, 37, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 37, 38, 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38, 38, 38, 33, 33, 33, 33, 33, 32, 32, 31, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGNWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QFQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKSLEWIGYIYPYNGGTGYNQKFKSKATLTVDNSSSTAYMELRSLTSEDSAVYYCARSYGNWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5312 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10763:6001 (reversed)", "sequence" : "GGGGGAGGTGCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGTGAGGAACTGGGCCGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCTATCCCCTGTGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVRNWADY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP 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"EVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARVRNWADYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5313 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6312:6002 (reversed)", "sequence" : "AGTGGAGGTGATGTTGGTGGAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGACTTCTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTCCAATGAGAAGTTCAAGGGCAATGCCACATTCACTGCAGATACATCCAACACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGAGAGCTCGGGCTTCGCCTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGCCCATCCCTTGTGCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 32, 33, 33, 35, 32, 33, 32, 32, 37, 37, 38, 38, 38, 38, 38, 36, 37, 38, 37, 37, 39, 37, 39, 39, 39, 35, 38, 38, 39, 39, 39, 39, 37, 38, 39, 38, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 36, 39, 38, 38, 39, 37, 37, 38, 39, 39, 39, 37, 39, 39, 37, 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}, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARELGLRLAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"TGTCGATGTGCAGCTTCAGGAGTCTGGGGGAGGTTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATACCATGTCTCGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTGCGGTGCAAGACACGGGGGTAGTAGAGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAGCACCCCCATCTGTTCATCCCCTGCCAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 29, 16, 29, 32, 32, 37, 37, 16, 37, 37, 37, 38, 38, 34, 38, 38, 38, 16, 37, 37, 39, 39, 38, 37, 38, 37, 36, 34, 15, 32, 15, 33, 38, 39, 16, 37, 37, 33, 33, 38, 37, 38, 39, 39, 39, 37, 33, 37, 14, 14, 36, 39, 14, 38, 38, 39, 39, 39, 35, 39, 39, 38, 39, 39, 39, 37, 39, 38, 36, 16, 17, 31, 38, 36, 39, 39, 37, 39, 39, 33, 38, 37, 39, 39, 39, 37, 39, 39, 38, 39, 39, 37, 38, 35, 38, 39, 39, 39, 37, 37, 37, 39, 39, 37, 39, 17, 17, 17, 33, 37, 36, 39, 38, 39, 34, 36, 38, 38, 36, 39, 34, 38, 39, 39, 36, 38, 16, 34, 38, 39, 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38, 38, 38, 38, 16, 34, 38, 32, 32, 35, 35, 35, 16, 37, 32, 16, 30, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVQLQESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSRVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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37, 37, 16, 37, 16, 34, 37, 37, 37, 37, 37, 37, 37, 37, 32, 31, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVKPGASVKLSCIAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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"QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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{ "sequence" : { "name" : "ERR346596.5466 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12241:6071 (reversed)", "sequence" : "CGAGGAGGTCCAGCTGCAACAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGAGATTACGACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGCCTATCCCTTGGACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 34, 34, 33, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 36, 38, 37, 38, 34, 37, 38, 39, 37, 37, 34, 39, 39, 39, 39, 39, 37, 38, 36, 36, 38, 38, 39, 38, 37, 38, 37, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHEDRDYDGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "83.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRDYDGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5467 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8241:6071 (reversed)", "sequence" : "ATAACAGGTTCAGCTTCAGCAATCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCGGCTTATCCCTTGGAGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 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39, 39, 39, 39, 36, 36, 36, 37, 38, 33, 38, 39, 39, 39, 39, 37, 39, 38, 38, 39, 38, 39, 37, 34, 38, 39, 37, 36, 35, 37, 32, 36, 33, 38, 39, 38, 38, 39, 38, 38, 39, 38, 38, 38, 37, 36, 38, 37, 38, 36, 34, 38, 39, 37, 38, 38, 37, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", 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39, 38, 38, 38, 38, 38, 35, 37, 37, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAGLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 34, 37, 33, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGTSVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGSDST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREKDWVFDH" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "36" }, { "name" : "Source-Identity", "value" : "87.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.45%" } ] }, { "name" 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"ERR346596.5270 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10662:5977 (reversed)", "sequence" : "TTGGGATGTGCAACTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTATTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCCTATCCACTGAGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 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38, 38, 38, 33, 32, 33, 37, 37, 37, 37, 33, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAS" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNARNILYLQMSRLRSEDTGMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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32, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGTVLARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQRPGQGLECIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"TTTGGAGGTGAAGCTTCTCGAGTCTGGAGCTGAGCTGGTAAGGCCAGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCTGCCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 32, 33, 33, 37, 37, 33, 33, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 36, 38, 38, 36, 38, 39, 39, 39, 33, 34, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 34, 39, 39, 39, 39, 39, 36, 38, 39, 38, 36, 38, 39, 39, 39, 37, 39, 39, 39, 37, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 39, 39, 39, 39, 39, 39, 20, 38, 39, 33, 36, 36, 15, 38, 37, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 37, 39, 37, 38, 37, 37, 39, 33, 38, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 38, 39, 38, 39, 39, 39, 39, 38, 38, 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35, 35, 35, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLLESGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTVDKSSGTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : 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}, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSASYTNYNQKFKDKATLTVDKSSGTAYMQLSSPTSEDSAVYYCTRGDDYYGGAPYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5412 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5446:6050 (reversed)", "sequence" : "TGCGGAGGTGCAACTGGTGGAGTCGTCCTCTCCCCACCCCCATCATGCTCGGACTCCCACCGCACCCTCTTCAGTGGGTCTTCATGTTCTCCCTGCTGGATGCTGCGGGCACTGTGCTGCCATGGCAGCCCCAACACCGGCTCCAGCCCAGGCCTGTCTTCTGAGTGCTAGCTTGGTACCCACAACTTGCACACCTCCACCTAGGATGTCCCACAGAGACTTCAAATCCATCATCTTCTCCCCATCTGCTCATCCCCTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 29, 32, 32, 33, 33, 33, 33, 32, 37, 37, 38, 38, 36, 38, 36, 38, 38, 38, 38, 38, 39, 39, 36, 38, 34, 37, 34, 38, 39, 38, 18, 37, 36, 32, 36, 36, 36, 38, 36, 38, 25, 39, 33, 35, 38, 20, 37, 37, 32, 32, 30, 36, 24, 33, 38, 39, 39, 39, 38, 35, 30, 31, 31, 37, 38, 39, 34, 36, 38, 37, 37, 37, 38, 39, 39, 38, 37, 34, 38, 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30, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLTESGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"EVQRVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSRYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.33%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 76, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 101, "max" : 151, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 77, "max" : 100, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", 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"translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 287, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGGVYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 2, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" 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"GCTAGAGGTCCAGCTGCAGCAGTCTGGGGCTGAGTTTGTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGCAAGGCCTCTGGCTACAACTTCACCAGCTACTGGATAAACTGGGTGAAACTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTGGTAATCACAAAAACGAGAAATTCAAGACCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGGCATCTGAGGACTCTGCTCTCTATTACTGTGCAAGAGATGGGAACTGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCTATCCCTTGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 38, 38, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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"name" : "Source-Identity", "value" : "84.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.23%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RDG" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { 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38, 37, 20, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKRRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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(292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKRRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAIYYYGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5330 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22582:6011 (reversed)", "sequence" : 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39, 38, 38, 37, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 37, 37, 34, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGSELVKPGASVKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRPSFYYGSSYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { 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"GGAGGAGGTGCAGGGGGTGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCTGTCCATCCCTTGCCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 36, 38, 38, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 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37, 38, 34, 37, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% 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"translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQGVESGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5345 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14037:6017 (reversed)", "sequence" : "TTTCGAGGTGAAGCTGATGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGGTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATTCTGGAAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACAGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGGGCGATTACGGATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCATTGAACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 32, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 37, 39, 39, 39, 38, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 38, 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37, 37, 37, 32, 32, 18, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGIYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.87%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 289, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "84.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVHLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGTNTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRRGIYDERTAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5351 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22837:6021 (reversed)", "sequence" : "GTTAGATTGCACCTGGTGGAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTCCATCCCCTGCTAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 33, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 37, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 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39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 35, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 39, 36, 38, 38, 38, 37, 37, 38, 38, 38, 34, 33, 33, 33, 33, 33, 37, 37, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 4, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "RLHLVESGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 322, "max" : 354, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 292, "max" : 321, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARETVRGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 4, "max" : 296, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "83.96%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 311, "max" : 354, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, 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"CCGGGAGGTCCAGCTGCAACAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTACCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAATTCTTCCTGCAGTTGAATTCTGTGACTTCTGACGACACAGCCACATATTACTGTGCAAGACAGAATGATGGTTACCTCTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCCTATCCCTTGGCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 38, 38, 37, 36, 37, 33, 38, 39, 39, 37, 39, 38, 37, 37, 38, 38, 37, 38, 39, 39, 39, 37, 38, 39, 39, 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"ATGCCAGGTTCAGCTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGACGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCGGAGGACTCTGCGGTCTATTACTGTGCAAGAGGCCTAATCTACTATGATTACGACGACGGGCCCCATATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCTTATCCCCTGTCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 29, 32, 30, 32, 37, 37, 33, 37, 37, 37, 37, 33, 38, 38, 38, 37, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 38, 39, 37, 39, 20, 37, 39, 39, 39, 39, 39, 39, 38, 38, 37, 34, 38, 39, 39, 37, 38, 39, 39, 39, 37, 37, 38, 36, 39, 38, 39, 39, 39, 36, 38, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 35, 38, 36, 38, 39, 39, 35, 38, 39, 39, 39, 37, 39, 36, 39, 39, 39, 39, 37, 38, 35, 39, 39, 39, 39, 37, 18, 38, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 37, 38, 39, 37, 33, 38, 37, 37, 39, 39, 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39, 39, 39, 37, 39, 38, 38, 36, 36, 38, 38, 39, 37, 37, 36, 37, 36, 34, 38, 38, 38, 38, 32, 16, 35, 32, 32, 37, 37, 32, 16, 29, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQTFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGLIYYDYDDGPHMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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"value" : "KYSEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPEMVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYSEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARRQLITTAAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5358 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6994:6025 (reversed)", "sequence" : 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: false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "RGQGTLVTVYA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ARDGYYVGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" 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39, 38, 38, 38, 37, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 33, 32, 32, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKGKATLTADKSSSTAYTQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TGTYWGQGTLVTVSA" }, { "name" : "translation", "value" : "TG" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGAELVKPGTSVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGDIYPGSDSTNYNEKFKSKATLTVDTSSSTAYMQLSGLTSEDSAVYYCAREKDWVFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5496 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7328:6084 (reversed)", "sequence" : "CGCCGAGGTGAAGCTGGTGGAGTCTGGGGCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACATTCACCAGTTACAATATGCACTGGGTAAAGCAGACACCTGGACAGGGCCTGGAATGGATTGGAACTATTTATCCAGGAAATGGTGATACTTCCTACAATCAGAAGTTCAAAGGCAAGGCCACATTGACTGCAGACAAATCGTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACCGTGTAAGATCGGAATTACGACGCTGGTTTGGTTATTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATAGGCTTATCCCCTGCACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 32, 32, 35, 35, 33, 33, 33, 37, 37, 38, 38, 38, 38, 37, 37, 38, 30, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 19, 31, 38, 38, 35, 37, 33, 37, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 37, 38, 39, 39, 39, 33, 37, 37, 39, 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37, 38, 38, 38, 33, 38, 33, 32, 33, 33, 37, 37, 37, 32, 29, 18, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGAELVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPGQGLEWIGT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "SYNQKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYYR" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPGNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 36, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 37, 39, 38, 37, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 38, 38, 38, 39, 38, 38, 38, 38, 37, 39, 37, 39, 39, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 37, 38, 37, 38, 38, 38, 38, 38, 38, 37, 39, 39, 39, 36, 37, 39, 38, 38, 37, 37, 39, 39, 39, 39, 37, 37, 39, 37, 37, 39, 39, 39, 38, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDC" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDCWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5498 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15439:6085 (reversed)", "sequence" : "CATTGAGGTGCAGCGGGTGGAGTCTGGGGGAGACTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCACTTTGGCATGTCTTGGGTTCGCCAGACTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTTTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGCCCCCATTACTACAATAGTAGCCCCTGGTGGTACTTCGATGTCTGGGGCGCTGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTCATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 36, 36, 36, 38, 39, 39, 39, 37, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSHFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSLKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASPHYYNSSPWWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 322, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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"value" : "EVQRVESGGDLVKPGGSLKLSCAASGFTFSHFGMSWVRQTPDKRLEWVATISSGGSYTYYPDSLKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCASPHYYNSSPWWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5237 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6460:5958 (reversed)", "sequence" : "ACACCAGGTCCAGCTTCAGCAGTCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAAGTGGTGGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGCCCATCCATTGCTTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 34, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 33, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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"CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVLGRPF" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.37%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "IGSYYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "IG" }, { "name" : "IMGT_allele", "value" : "IGHD1-26*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-26" }, { "name" : "Source-Sequence", "value" : "AF062225" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAEVVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGLINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARVLGRPFWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5238 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17715:5958 (reversed)", "sequence" : "TAAGGAGGTGCAGGTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGACTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCAACTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGGGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACATGGCCATGTATTATTGTGTAAGAGGGGAACTGGGACGTCGATATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCACTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 32, 32, 33, 33, 37, 33, 33, 33, 33, 37, 37, 38, 38, 37, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 38, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 36, 39, 37, 38, 37, 38, 38, 37, 39, 39, 39, 39, 38, 39, 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"QVQLKESGTVLARPGASVKMSCKASGYSFTSYWMHWVKQRPGQGLEWIGAIYPGNSDTSYNQKFKGKAKLTAVSSASTAYMELSSLTNEDSAVYYCTRSPTMITTYSGAMDYWGQGTSVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5361 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15550:6026 (reversed)", "sequence" : "AGGGCAGGTTCAGCTGCAGCAATCTGGGCCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCAGGCTATACGTTCACCAGCTACTGGATGCACTGGGTGAAACAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTGATCCTTCTAATCGTGAAACTAGGTTAAATCAGAAGTTCATGGACAAGGCCACATTGAATGTAGACAAATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAAGAACCACTATGCTATGGACTACTGGGGTCAGGGAACCTCAGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGCCCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 33, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMH*VKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVPS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5363 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13757:6026 (reversed)", "sequence" : "TACAGATGTGCACCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACGCCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCACGTATTACTGTGCAAGATTGAGGAGGTACTACGGGTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCAGCCTATCCCTTGGACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 36, 36, 34, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 36, 38, 39, 38, 39, 38, 38, 39, 39, 38, 38, 38, 38, 38, 37, 38, 39, 38, 38, 36, 38, 38, 39, 37, 37, 38, 38, 38, 38, 38, 38, 34, 38, 37, 32, 33, 33, 37, 37, 37, 33, 31, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVQPGGSRKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVRQAPEKGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSFG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYADTVKGRFTISRDNPKNALFLQMTSLRSEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGSSTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARLRRYYGYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAP EKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-17*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-17" }, { "name" : "Videntity", "value" : "99,66% (293/294 nt)" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVHLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNALFLQMTSLRSEDTATYYCARLRRYYGYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5364 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12097:6026 (reversed)", "sequence" : "GTGACAGGTTCAGCTTCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGTTTATCCACTGGTTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 19, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 37, 38, 39, 36, 38, 39, 38, 39, 39, 37, 39, 34, 38, 36, 38, 37, 39, 38, 39, 38, 38, 39, 37, 39, 38, 37, 35, 39, 35, 38, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 38, 39, 39, 39, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 37, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 35, 36, 38, 39, 37, 36, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 37, 38, 35, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 38, 39, 36, 38, 37, 38, 39, 36, 37, 38, 39, 38, 38, 39, 39, 36, 34, 38, 38, 38, 37, 37, 39, 38, 37, 36, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5365 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9408:6027 (reversed)", "sequence" : "GGTTGAGGTGCAGGTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCATTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 33, 37, 37, 37, 37, 33, 37, 37, 37, 33, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 36, 30, 36, 32, 17, 38, 38, 38, 38, 39, 33, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 33, 38, 39, 38, 35, 32, 38, 38, 38, 39, 39, 39, 39, 39, 37, 38, 38, 35, 20, 38, 39, 39, 39, 39, 39, 39, 17, 37, 37, 39, 36, 39, 39, 38, 39, 34, 38, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 30, 37, 39, 39, 38, 38, 37, 36, 37, 30, 38, 38, 38, 36, 30, 37, 39, 38, 17, 38, 39, 39, 39, 39, 39, 37, 14, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 37, 32, 35, 38, 37, 37, 37, 38, 39, 25, 39, 37, 38, 16, 33, 37, 37, 37, 37, 34, 38, 27, 35, 37, 37, 38, 38, 38, 39, 36, 35, 34, 24, 27, 35, 27, 17, 38, 34, 37, 39, 34, 34, 33, 34, 38, 37, 37, 33, 38, 37, 36, 33, 34, 26, 38, 39, 37, 39, 38, 25, 13, 24, 24, 35, 38, 38, 38, 33, 38, 33, 38, 37, 34, 28, 15, 38, 38, 35, 37, 35, 33, 38, 39, 37, 37, 39, 38, 38, 37, 37, 38, 37, 34, 39, 38, 38, 33, 37, 37, 33, 37, 33, 37, 39, 37, 37, 16, 16, 37, 38, 39, 39, 36, 27, 37, 15, 38, 31, 31, 16, 39, 37, 37, 39, 39, 39, 38, 38, 33, 38, 39, 39, 38, 37, 33, 37, 36, 38, 37, 29, 27, 38, 38, 29, 33, 38, 33, 37, 37, 37, 37, 33, 37, 39, 37, 38, 35, 38, 38, 38, 39, 38, 37, 39, 37, 38, 17, 39, 35, 38, 38, 38, 39, 38, 38, 39, 38, 38, 37, 32, 38, 38, 38, 38, 38, 38, 36, 32, 38, 38, 39, 38, 33, 39, 38, 39, 38, 36, 36, 36, 38, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 37, 38, 39, 39, 38, 37, 39, 39, 39, 39, 39, 38, 38, 36, 37, 38, 38, 39, 38, 38, 38, 37, 37, 16, 38, 33, 16, 34, 37, 37, 37, 37, 37, 32, 32, 32, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, 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"97.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLASEDTAVYYCAIYYGGSSGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5376 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8829:6032 (reversed)", "sequence" : "AGGGGACGTGATGCTGGTGGAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGTACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGATATTAGTTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGTACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATCAACGGCTACGGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGTTTATCCATTGAGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 33, 34, 34, 34, 33, 34, 32, 33, 33, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 37, 38, 37, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 38, 37, 39, 37, 37, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 30, 37, 36, 37, 38, 37, 34, 38, 38, 38, 39, 38, 37, 39, 39, 39, 36, 37, 35, 38, 39, 37, 37, 39, 39, 39, 38, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 36, 38, 39, 39, 38, 39, 38, 37, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 37, 38, 33, 38, 38, 37, 38, 38, 38, 37, 37, 38, 37, 39, 38, 39, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 34, 36, 39, 39, 37, 38, 39, 39, 38, 38, 39, 39, 39, 38, 38, 37, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 37, 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"DVMLVESGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSTATGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", 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"Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPDLVKPGASVKISCKASGYSFTGYYMYWVKQSHGKSLEWIGRVNPNNGDISYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARSTATGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5377 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20003:6032 (reversed)", "sequence" : "CACTCAGGTTCAGCTTCAGCAGTCTGGACCTGAACTGGTGAAGCCTGGGGCCTCAGTGAAGATCTCCTGCACAGGTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTCCAATGGGAGGTTCAAGGGCAAGGCCACACTGACTGCAGACAGATCCTCCAACACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCAAGATCTGCATACTACGGTAGTAGTTACGGTGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCACTGACCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 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36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCTGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFSSSW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGDGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSAYYGSSYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.32%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPELVKPGASVKISCTGSGYAFSSSWMNWVKQRPGQGLEWIGRIYPGDGDTNSNGRFKGKATLTADRSSNTAYMQLSSLTSVDSAVYFCARSAYYGSSYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5378 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23091:6033 (reversed)", "sequence" : "TGTGCAGGTGCAGCTGAAGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGTCTTCAGTGAAGATATCCTGCAAGACTTCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGGTATTAATTCTAATAATGGTGGTGCTAGTTACAACGGGAGGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGAACGATTTATTACTACGGTATGAGCGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACGCCCCCATCTGTCCATCCACTGGTGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 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"Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKQSGPGLVAPSQSLSITCTVSGFSLTDYGVSWIRQPPGKGLEWLGVIWGGGITYYNSTLKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCAKHDTTVVLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5382 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18501:6035 (reversed)", "sequence" : "ATCAGAAGTGATGTTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTTCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTGTTGGATTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCGTTAGTGATGGTGGTAATTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGTAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTTTATCCCTTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 32, 37, 33, 37, 37, 37, 33, 37, 38, 18, 33, 18, 32, 16, 32, 32, 16, 37, 38, 39, 39, 39, 38, 37, 36, 15, 15, 37, 34, 30, 38, 37, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 30, 14, 36, 37, 32, 38, 38, 38, 39, 33, 37, 37, 38, 39, 39, 39, 39, 39, 38, 33, 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"name" : "translation", "value" : "VSDGGNYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"intervals" : [ { "min" : 318, "max" : 326, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "81.82%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGFLKLSCAASGFTFSDYYMCWIRQTPEKRLEWVATVSDGGNYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCVRSGERYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5383 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19200:6035 (reversed)", "sequence" : "GCGCGAGGTGAAGCTGATGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAGGATATCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAATGTTAATACTAAGTACAATGAGAAGTTCAAGGTCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAGACACAAGTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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36, 36, 17, 38, 38, 38, 34, 34, 38, 36, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 32, 32, 32, 33, 31, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVKPGASVRISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKVKATLTADKSSSTAYMQLSSLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGNVNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHKWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.74%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", 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"TGGTGATGTAAAGCTTCAGGAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCGACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCTCTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTTCATCCCCTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 37, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 38, 38, 36, 37, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 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38, 34, 38, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : 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38, 38, 37, 38, 38, 34, 34, 33, 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLPCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"GGAGGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGATGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTAGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTGATCCTTTCAATGGTGGTACTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAATCTTCCAGCACAGCCTACATGCATCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCCCCACTCTCTAGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCTATCCCTTGTCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 33, 33, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 39, 34, 39, 39, 39, 39, 39, 39, 18, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 20, 33, 33, 38, 37, 39, 39, 37, 38, 18, 38, 33, 31, 37, 37, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 33, 36, 37, 39, 39, 36, 39, 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32, 29, 18, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELMKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", 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"endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "APLSRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.19%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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: 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "PGLLP" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WFASWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCTTSGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTKYDPEFQGKATITADTSSNTAYLHLSSLTSEDTAVYSCAHDAPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5524 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20963:6099 (reversed)", "sequence" : "GTCGGAGGTCCAGCTGCAACAGTCCAGGCAATGTCAGCCAGAGTAGGGACTGGAGGGACATCTTTCAAACACAGGTCAGAGATGTTGGGCAGGGTCTCAAAGGATGCCCGTGGACAGGGCTTCAGGGGGAGATTGGTCCCAATTCTTCTTACCACACTGCGAGCAGCCCCATGTGGCTTGTTTTGCCAGATTGGGATAGTCACATTGGCTTCCATTCCTGATGTTTCAGCCAGCTCCTGTACCTGAAGGACGAGGCACCCACAGGGAAAGCTGGAGGGGTGGCTCCTTCATATCAGGCCATTTCCAGGAGCACGAGGTTTCCTTTCCTCAGCCCCTCCTACCCCATCTGCTTATCCACTGAGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 33, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 38, 39, 38, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 38, 38, 38, 37, 38, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 36, 37, 38, 37, 39, 39, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 38, 38, 38, 37, 38, 35, 39, 39, 39, 39, 39, 39, 39, 39, 37, 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"max" : 27, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 79, "max" : 186, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "EMLGRVSKDARGQGFRGRLVPILLTTLRAAPCGLFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 28, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "AMSARVGTGGTSFKHRS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 245, "max" : 274, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EGRGTHRESW" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 187, "max" : 244, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "1" } ] } ] }, { "sequence" : { "name" : "ERR346596.5525 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8712:6099 (reversed)", "sequence" : "ATTACAGGTGCAGCTGAAGGAGTCAAGGAAACAACTACCAGGGTCATGGCAACTTTGACTTCCCCCATGGGAATCCCGGAGGGACATCCATGAACGACTTCATGCACGGTCCCCCCCAGCTCTCGCACCCACCGGACATGCCCAACAACATGGCCGCCCTCGAGAAACCCCTCAGTCACCCCATGCAGGAAACTCTGCTGCCGGAACTCACAAACCCGGATGAGCTTCTTTCCTACCTGGACCCCCCCGACCTTCCAAGCAATAGCAACGATGACCTCCTGTCTCTCTTTGAGAACAACTGAAGGCCACTCTCCACTGGGGCCATCCCTCCCCACTCTGCCTCCTACCCCATCTGTCCATCCACTGCCCG", "circular" : false, "sequenceType" : 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38, 38, 38, 38, 38, 36, 37, 38, 38, 38, 32, 32, 33, 33, 33, 33, 33, 32, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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{ "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSP" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.25%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "93.10%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { 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"sequence" : { "name" : "ERR346596.5578 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13589:6120 (reversed)", "sequence" : "AATACAGGTCCACGTGAAGCAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTAGTTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGATACGCTACGGCTACGTACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCCTATCCCCTGAATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 33, 32, 37, 37, 37, 37, 37, 37, 37, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 37, 39, 39, 38, 39, 39, 39, 37, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 35, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 33, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 33, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 33, 39, 39, 39, 39, 39, 39, 37, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 38, 37, 38, 36, 37, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 33, 37, 38, 33, 38, 39, 34, 39, 37, 37, 38, 39, 36, 17, 39, 39, 38, 33, 39, 38, 39, 38, 38, 38, 35, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYATATYWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.05%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 311, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGEINPSNGRTNYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARYATATYWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5579 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12470:6120 (reversed)", "sequence" : "AGGCGAGGTGATGCTGGTGGAGTCTGGACCTGAGGTGGTAAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGCCTACTACATTCACTGGGTGAAGCAAAGTCATGTAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTAGCTACAACCAGAATTTCAAGGACAGGGCCAACTTGACTGTAGAAAAGTCCTCCAGCAGAGCCTACATGGAGGTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAATAAGAACCCGGGCCTACTATGATCACCCCCTGGGGTTTTCTTATTGGGGCCTAGGGACTCTGGTCACTGTCTCGGCAGCCAAAACGACACCCCCATCGGTTTATCCCTTGGTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 37, 37, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 38, 39, 39, 38, 37, 39, 37, 39, 39, 39, 38, 38, 38, 37, 35, 36, 39, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 37, 37, 38, 37, 37, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 38, 39, 38, 38, 38, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 39, 37, 16, 38, 30, 14, 38, 38, 38, 38, 37, 39, 39, 39, 39, 37, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 36, 38, 38, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 37, 39, 39, 38, 36, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 37, 39, 38, 38, 39, 38, 38, 36, 37, 38, 39, 38, 38, 39, 39, 38, 38, 38, 38, 37, 37, 36, 38, 38, 38, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPEVVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQSHVKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTAYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGDT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 341, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGLGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 340, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIRTRAYYDHPLGFSY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 330, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPEVVKPGASVKISCKASGYSFTAYYIHWVKQSHVKSLEWIGRINPYNGDTSYNQNFKDRANLTVEKSSSRAYMEVHSLTSEDSAVYYCAIRTRAYYDHPLGFSYWGLGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5580 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19877:6120 (reversed)", "sequence" : "AAGGGAGGTCCAGCTGCAACAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCACTGGTTATACTGAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTGAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGAGAAACGGCCCTTCATTACTACGGCTACTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTCATCCACTGGACA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 17, 33, 33, 37, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 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"EVQLQESGADLVKPGASVKLSCTTSGFNIKDTFMHWVKQRPEQGLEWIGRIDPASGNTKYDPKFQGKATITADTSSNKVSLQLSGLTSEDTAVYYCAHDAPFTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5583 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15847:6123 (reversed)", "sequence" : "TCGCGAGGTGAAGTTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTTTGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAATGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTACAAGATCGGGGACATTAGGGGCTGTGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCATTGAGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 32, 33, 37, 37, 38, 38, 38, 38, 38, 36, 37, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 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: "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAFTTKANFFAYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5585 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6645:6126 (reversed)", "sequence" : "GAGTCAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGCTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTTCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAAACGACACCCCCATCAGCCCATCCCTTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 19, 37, 38, 38, 38, 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"Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" 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"name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYNLSVEGQFTISRDNSQGTLYLQMNTLRSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPELVKPGASVKISCKASGYTFTNYYIHWVKQRPGQGLEWIGWIYPGNVNTKYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARTGNYGSSWELRYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5590 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATFTVDTSSSIAYMQFNSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRCHNGAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVSYDYDYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TMVRGVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "TM" }, { "name" : "IMGT_allele", "value" : "IGHD4/OR15-4a*01" }, { "name" : "IMGT_gene", "value" : "IGHD4/OR15-4a" }, { "name" : "Source-Sequence", "value" : "AY621628" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKTGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGYIRCHNGATSYNQKFKGKATFTVDTSSSIAYMQFNSLTSEDSAVYYCARVSYDYDYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5592 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8029:6129 (reversed)", "sequence" : "TCGGGAGGTAAAGCTTCAGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGTTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCGCCATCTCCAGAGACAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATATAAGTTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCATTGAACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 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39, 36, 38, 39, 39, 37, 36, 37, 36, 36, 37, 38, 36, 38, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 38, 39, 39, 37, 39, 37, 38, 36, 37, 37, 38, 38, 38, 38, 38, 38, 39, 39, 38, 37, 39, 39, 39, 39, 37, 38, 37, 36, 36, 38, 38, 39, 38, 38, 37, 37, 38, 35, 37, 37, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 30, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFAISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDISWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "94.08%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFAISRDNSQSILYLQMNTLRAEDSATYYCARDISWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5593 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11420:6129 (reversed)", "sequence" : "CACGCAGGTCCACGTGAAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTCATCCACTGAGCG", "circular" : false, 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"translation", "value" : "AREGVYYGNPYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 328, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVTS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : "99,32% (294/296 nt)" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.27%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : 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"DVQLQESGGGLVKPGGSLKLSCAASGFTFSDFYMFWFRQTPEKRLEWVATISNGGTYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVTS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5600 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19333:6131 (reversed)", "sequence" : "TCCGCAGGTTCAGCTCCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGGAGTCCCTATGGACTACTGGGGTCAGGGAACCTCGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCCCATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 19, 36, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSYGKITRHFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.60%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", 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"name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVMGRFTISRDNAKNTLYLQMTSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGHGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGRYDERTDMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGDLVKPGGSLKLSCAASGFTFSTYGMSWVRQTPDKRLEWVATINSGGSYTYYPDSVMGRFTISRDNAKNTLYLQMTSLKSEDTAMYYCTRRGRYDERTDMDYWGHGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5534 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21603:6101 (reversed)", "sequence" : "CAAACAGGTCCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGTTTTTGGCTTCAACATTAAATCCACCTATATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATGGGTTGATCCTGCGAATGGTAATAGTAAATGTGACCCGAGGTTCCAGGGCAAGGCCACTATAACAGCAGACTCATCTTCCAACACAGCCTACCTGCAGCTCAGCAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCTCCATTACGCCTACCAGTTTGACTACTGGGGCCAAGGCACCACTGTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCACTGGCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKSTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "VDPANGNS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ALHYAYQFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "22" }, { "name" : "Source-Identity", "value" : "92.52%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTVFGFNIKSTYIHWVKQRPEQGLEWIGWVDPANGNSKCDPRFQGKATITADSSSNTAYLQLSSLTSEDTAVYYCALHYAYQFDYWGQGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5535 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24142:6102 (reversed)", "sequence" : "CCTACAGGTTCAGCTTCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTTTATCCCCTGGTAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 35, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 37, 38, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 38, 37, 38, 38, 38, 38, 38, 37, 38, 38, 32, 32, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "27" }, { "name" : "Source-Identity", "value" : "90.82%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPDLVKPGASVKMSCKASGYSFTDYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5536 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:12985:6102 (reversed)", "sequence" : "TTATCAGGTCCAACTCCAGCAACCCATCCCCATCGGTCTATCCTTGAGAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAACTGGACAGGGTCTTGAGTGGATTGGGTGGTCTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCAACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTGAGTATATTTACATCTGCAGACTCTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTTATCAGGTCCAACTCCAGCAACCCATCCCCATCGGTCTATCCTTGAGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 34, 35, 38, 38, 19, 38, 38, 38, 38, 38, 34, 37, 39, 30, 17, 37, 37, 33, 38, 36, 19, 38, 37, 36, 38, 32, 32, 36, 37, 36, 38, 34, 38, 37, 35, 35, 38, 36, 39, 17, 36, 34, 35, 18, 37, 38, 34, 37, 16, 34, 34, 34, 36, 34, 38, 39, 38, 37, 39, 37, 37, 35, 35, 39, 39, 31, 38, 33, 38, 37, 39, 33, 38, 39, 37, 38, 35, 33, 31, 29, 33, 37, 38, 16, 31, 19, 37, 30, 16, 18, 18, 31, 35, 36, 16, 36, 34, 34, 19, 19, 37, 19, 37, 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38, 39, 39, 38, 37, 32, 35, 38, 38, 38, 38, 37, 36, 34, 38, 37, 37, 37, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 360, "max" : 395, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : true } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 183, "max" : 296, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "RIIKKKKSLQM*IYSAPYRLCWRICPQSMLPCP*ISHC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 297, "max" : 359, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "VGPDKDRKSVV*GKSVDLGGR" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 132, "max" : 164, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "QGKTTQSTQDP" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 165, "max" : 182, "direction" : "Left", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "TLYYHF" } ] } ] }, { "sequence" : { "name" : "ERR346596.5537 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13983:6103 (reversed)", "sequence" : "GGCGCAGGTGCAGCTTAAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCACTTTTAGTGGCGCCTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGAGCTTGAGTGGGTTGCTGAAATTAGAAGCAAAGCTAATAATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGTACCAGGTCTAACTGGGCCACCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCCCATCCCTTGACCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 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36, 36, 38, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 32, 32, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSMKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MDWVRQSPEKELEWVAE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSGAW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IRSKANNHAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" 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"GCAACAGGTCCAGCTGCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGTTAGGACGTATTGCTCCTGGAAGTGGTAGTACTTACTACAATGAAATGTTCAAGGTCAAGGCACCACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGCTGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCTTGTCTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 18, 37, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 36, 37, 39, 37, 39, 38, 38, 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39, 38, 37, 38, 36, 37, 38, 38, 38, 37, 36, 37, 32, 33, 32, 37, 37, 37, 32, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGDDLVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWLGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYNEMFKVKAPLTVDTSSSTAYIQLSSLSSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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39, 36, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "98.98%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 368, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARHGGRRGLYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5540 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11764:6104 (reversed)", "sequence" : "GGAAGAGGTTCAGCTGCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGTCTATCCCTTGGCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "25" }, { "name" : "Source-Identity", "value" : "91.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTSYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARGDYGSSYRYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5541 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:19804:6104 (reversed)", "sequence" : "GTATGAGGTCCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTATATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGAAAGGATTGATCCTGCGAAATGTAATACTAAATATGACCCGGAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATACAGCCTACCTGCACCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTCCTGTGCTCATGATGCCCCTTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGGCAAAACAACACCCCCATCAGCTCATCCCTTGGACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 32, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 38, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 36, 39, 39, 38, 38, 38, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 34, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 38, 37, 38, 39, 39, 39, 38, 38, 39, 39, 39, 38, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 37, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 38, 39, 39, 39, 37, 39, 37, 38, 39, 37, 38, 36, 37, 33, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 38, 39, 39, 37, 17, 39, 39, 39, 38, 39, 38, 37, 36, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 34, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIER" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPEFQGKATITADTSSNTAYLHLSSLTSEDTAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IDPAKCNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AHDAPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "PGLLP" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WFASWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTTSGFNIKDTYIHWVKQRPEQGLEWIERIDPAKCNTKYDPEFQGKATITADTSSNTAYLHLSSLTSEDTAVYSCAHDAPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5543 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23453:6107 (reversed)", "sequence" : "GAATGAGGTCCAGCTGCAACAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAACTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTGCTCCTGGAAGTGGCAGTACTTACTACAATGAAATGTTCAAGGGCAAGACAACACTGACTGTAGACACATCCTCCAGCACAGCCTACATTCAGCTCAGCAGCCTGTCATCTGAGGACTCTGATGTCTATTTCTGTGCAAGAGAGAGATATGGTTACGACGGGTGGTATTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCTACAACAACAGCCCCATCAGTCCATCCCCTGAGCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5548 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21544:6108 (reversed)", "sequence" : "TTTGGAGGTGCAGCGGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGACTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCCACTATCCAGACACTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGGCAAGAACACCCTGTATGTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGACAACATTACTACGGCTCCTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCTATCCCTTGAATA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 37, 35, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 35, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 38, 38, 35, 34, 38, 37, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 37, 37, 35, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 36, 35, 34, 37, 38, 36, 24, 26, 37, 37, 37, 36, 30, 36, 38, 38, 38, 38, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 38, 38, 38, 38, 34, 37, 38, 33, 37, 38, 32, 35, 34, 32, 25, 15, 26, 33, 39, 39, 39, 38, 39, 26, 39, 39, 38, 33, 36, 38, 39, 39, 39, 39, 37, 37, 34, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPEKRLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFAFSSYD" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYPDTVKGRFTVSRDNGKNTLYVQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARQHYYGSYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "21" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.04%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 312, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQRVESGGGLVKPGGSLKLSCAASGFAFSSYDMSWVRQTPEKRLEWVAYISSGGGSTHYPDTVKGRFTVSRDNGKNTLYVQMSSLKSEDTAMYYCARQHYYGSYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5553 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11934:6109 (reversed)", "sequence" : "TCAAGAGGTGCAGCTCCAGCAGTCTGGACCTGACCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTGTTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCATATTAACTGTAGACAAGTCATCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGTAGTAGCTACAGATACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCTGCTTATCCCCAGGGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 34, 37, 37, 38, 38, 38, 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39, 39, 37, 39, 37, 39, 39, 39, 39, 35, 34, 38, 38, 38, 39, 39, 38, 39, 39, 39, 36, 39, 39, 39, 33, 39, 39, 37, 38, 36, 39, 38, 39, 39, 38, 38, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 36, 37, 38, 18, 36, 37, 37, 39, 36, 36, 36, 30, 30, 37, 38, 36, 38, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 39, 39, 38, 39, 32, 36, 34, 38, 36, 38, 38, 37, 39, 38, 38, 39, 39, 38, 37, 39, 39, 38, 37, 39, 38, 36, 36, 17, 38, 38, 39, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPDLVKPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGSSYRYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFAVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M24452" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "94.44%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AIYYYGSSGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.62%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "MHWVKQRPGQGLECIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TYNQHFKGKAKLTAVTSASTAYMELSRLTNEVSADYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,58% (281/294 nt)" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "51" }, { "name" : "Source-Identity", "value" : "82.65%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGTVLARPGASVKMSCKASGYSFTSYWMHWVKQRPGQGLECIGAIYPGNSDTTYNQHFKGKAKLTAVTSASTAYMELSRLTNEVSADYYCTRLGHYYGYIFDYWGQGTTLTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5508 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9636:6090 (reversed)", "sequence" : "CCCTGACGTGAAGCTGGTGGAGTCAGGACCTGACCTGGTGAAGCCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTTATTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGCTACATACACTACAGTGGTACCACTGTCTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAATAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGATTCGCTGGGACCCCCTATACTATGTACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTTCATCCCTTGGCAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33, 38, 38, 38, 38, 38, 19, 38, 32, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSYYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARFAGTPYTMYY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"DVKLVESGPDLVKPSQSLSLTCTVTGYSITSYYSWHWIRQFPGNKLEWMGYIHYSGTTVYNPSLKSRISITRDTSNNQFFLQLNSVTTEDTATYYCARFAGTPYTMYYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5511 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21254:6091 (reversed)", "sequence" : "ACTAGAAGTGAAGCTTGAGGAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTCCAACATGAACTGGGTGAAGCAGAGCAATGGAGAGAACCTTGAGTGGATTGGAAACATTGATCCTTACTATGGTGGTACTAGCTACAGCCAGAAATTCAAGGGCAAGGCCACTTTGACTGTAGACAAATCCCCCAGCACAGCCTACATGCAGCTCAGGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAAAAAGGACTACGGTAGTAGCTCGTTTGACTACTGGGGCCAGGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCATTGCTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 38, 39, 38, 39, 39, 38, 39, 36, 38, 38, 39, 38, 39, 39, 37, 39, 39, 39, 39, 37, 38, 37, 38, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 39, 38, 37, 37, 36, 39, 39, 36, 16, 38, 38, 38, 37, 38, 39, 36, 36, 36, 38, 38, 39, 37, 37, 37, 36, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLEESGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSNGENLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTDSN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYSQKFKGKATLTVDKSPSTAYMQLRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AKKDYGSSSFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "42" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "SFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.62%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" 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"startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MEWVRQPPGKRLEWIAA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SRNKANDYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 347, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDAYYRYGNYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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(2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYRYVLDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "FJ755846" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 379, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLRLSCATSGFTFSDFYMEWVRQPPGKRLEWIAASRNKANDYTTEYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIYYCARDAYYRYGNYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5513 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:17505:6091 (reversed)", "sequence" : "TTGCGAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCTTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAATGGATTGGACGGATTTATCCTGGAGATGGAAATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGTGGACTCTGCGGTCTATTTCTGTGCCCTCTATGATTACGACGGACTCTCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCGGCTCATCCATTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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"QVQLKESGDELMKPGASVKISCKATGYTFSHYWIEWVKQRPGHGLEWIGEILPGTGSTKYNEKFKGKATITADTSSSTAYMQLSSLTSEDSAVYYCTRSLRRYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5643 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25435:6153 (reversed)", "sequence" : "CAGTCAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGCTATTACTACGGTAGTAGCTACGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGTTTATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 32, 29, 29, 35, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 33, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 34, 37, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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14, 14, 29, 38, 37, 35, 38, 33, 17, 37, 34, 36, 38, 38, 39, 38, 39, 39, 39, 38, 39, 38, 37, 16, 39, 38, 36, 37, 34, 16, 16, 35, 37, 33, 37, 15, 38, 39, 38, 37, 38, 32, 37, 38, 39, 39, 38, 37, 38, 38, 38, 37, 38, 39, 38, 37, 36, 38, 38, 39, 38, 38, 38, 38, 38, 38, 33, 16, 16, 16, 32, 32, 35, 32, 29, 16, 32, 32, 30, 31, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ASYYYGSSYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "98.64%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5644 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15882:6154 (reversed)", "sequence" : "GACGGAGGTGCAGCTCCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGGAGATACCCTGCAAGGCTTCTGGATACACCTTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGACAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTATCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACGCTGCAGTCGATTACTGTGCTAGAGAAGGTTTCGGGGCCTGGTTTGATTACTGGGGCCAAGGAACTCTGGTCACTGTCTCCGCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGCTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 16, 29, 32, 32, 32, 35, 32, 32, 37, 37, 38, 38, 38, 16, 37, 37, 16, 38, 38, 38, 39, 39, 39, 39, 39, 38, 15, 38, 38, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 35, 39, 39, 39, 39, 39, 39, 38, 36, 36, 38, 39, 39, 39, 39, 39, 39, 15, 38, 38, 37, 38, 16, 16, 33, 37, 39, 39, 38, 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17, 17, 39, 37, 38, 37, 36, 37, 37, 38, 37, 39, 39, 38, 35, 33, 17, 37, 33, 15, 15, 16, 38, 31, 38, 38, 38, 37, 33, 38, 34, 38, 36, 32, 14, 37, 38, 39, 39, 36, 34, 39, 39, 38, 37, 38, 36, 36, 36, 32, 38, 38, 39, 38, 36, 36, 30, 32, 15, 38, 32, 16, 16, 32, 32, 31, 32, 30, 37, 37, 32, 32, 32, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVEIPCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MDWVKQSHGQSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYNQKFKGKATLTVDKSSSTAYMELRSLTSEDAAVDYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AREGFGAWFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "25" }, { "name" : "Source-Identity", "value" : "91.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : 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"translation", "value" : "EVQLQQSGPELVKPGASVEIPCKASGYTFTDYNMDWVKQSHGQSLEWIGDINPNNGGTIYNQKFKGKATLTVDKSSSTAYMELRSLTSEDAAVDYCAREGFGAWFDYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5645 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:5745:6154 (reversed)", "sequence" : "GATAGAGGTGAAGCTGATGGAATCAGGACCCGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCGTCTCTCAAAAGTCGAATCTCTACCACTCGAGACACATCCAAGAACAAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGGGACCAGGGGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCATCCATTGTTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 33, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 38, 38, 39, 39, 38, 38, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 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"ERR346596.5662 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21680:6164 (reversed)", "sequence" : "CAAAGAGGTAAAGCTTCAGGAGTCTGGGGCAGACCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAACTTCTGGCTTCAATATTAAAGACACCTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGAAAGATTGATCCTGCGAGTGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAATAAAGTCTCCCTGCAGCTCAGCGGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCATGATGCCCCTTTTACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCGGTCCATCCCCTGAGTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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37, 37, 37, 37, 34, 34, 32, 32, 33, 37, 33, 35, 37, 32, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKMSCKAF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWMKQNHGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"sequence" : { "name" : "ERR346596.5614 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11986:6142 (reversed)", "sequence" : "CTAGCAGGTTCAGCTGCAGCAATCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTAGCTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTAATCCTTACAATGATGGTACTAAGTACAATGAGAAGTTCAAAGGCAAGGCCACACTGACTTCAGACAAATCCTCCAGCACAGCCCACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGTAGTACCTGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTCCCTTGTTCA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYV" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYNEKFKGKATLTSDKSSSTAHMELSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNDGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGSTWAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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38, 37, 38, 39, 39, 38, 38, 37, 38, 37, 34, 37, 38, 37, 38, 37, 38, 37, 16, 33, 37, 37, 37, 37, 37, 37, 37, 32, 32, 16, 16, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 152, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"MDWVKQSHGKSLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYNQKFKDKATLTVDKSSSTAYMELRSLTSEDTAVDYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTILTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VREDWDGDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH 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"name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESGPELVKPGASVKIPCKASGYTFTDYNMDWVKQSHGKSLEWIGDINPNNGGTIYNQKFKDKATLTVDKSSSTAYMELRSLTSEDTAVDYCVREDWDGDFDYWGQGTILTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5640 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24750:6152 (reversed)", "sequence" : "TATGCAGGTTCAGCTTCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGATAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGAGTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTTTATTTCTGTGCAAGAGAGACAGTTCGGGGCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGTTCATCCACTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 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39, 37, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 37, 36, 39, 39, 38, 39, 38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 38, 36, 37, 39, 39, 36, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 38, 37, 37, 37, 37, 32, 33, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IEWIKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARETVRGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "41" }, { "name" : "Source-Identity", "value" : "86.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWIKQRPGQGLEWIGVSNPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARETVRGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5761 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9118:6218 (reversed)", "sequence" : "ACGGCAGGTCCAGCTGCAGCAGTCTGGGGCAGGGCTTGTGAAGCCAGGGGCCTCAGTGAAGTTGTCCTGCACCGCTTCTGGCTTCAAAATTAAAGACACCTATATGCACTGGGGGGAGCAGAGGCCTGGACAGGGCCTGGAGTGGATTGGGAGGGTTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACAATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATATTACTACGGTAGTAGCTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCCCATCGGCCCATCCACTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 33, 38, 38, 37, 37, 37, 38, 38, 38, 38, 38, 37, 37, 39, 39, 39, 39, 38, 17, 32, 33, 17, 32, 17, 32, 37, 30, 37, 36, 20, 20, 20, 32, 38, 17, 33, 32, 16, 36, 15, 32, 32, 16, 18, 18, 37, 20, 20, 35, 20, 20, 35, 20, 31, 20, 37, 35, 18, 18, 17, 33, 18, 15, 29, 14, 33, 16, 31, 33, 37, 18, 17, 33, 16, 18, 31, 19, 18, 33, 18, 18, 33, 19, 19, 33, 15, 30, 15, 30, 37, 33, 18, 18, 19, 19, 37, 38, 18, 30, 38, 38, 39, 14, 14, 12, 12, 12, 24, 32, 24, 14, 13, 32, 32, 36, 24, 34, 13, 25, 13, 25, 13, 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37, 37, 37, 37, 37, 37, 34, 29, 16, 29, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAGLVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWGEQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "GFKIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGSSYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "14" }, { "name" : "Source-Identity", "value" : "95.24%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 362, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 297, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYGSSYVWFAYWGQGTLVTVSA" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YYYGSSY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "91.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAGLVKPGASVKLSCTASGFKIKDTYMHWGEQRPGQGLEWIGRVDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARYYYGSSYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5762 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11598:6219 (reversed)", "sequence" : "GGGGCAGGTCCAACTCCAGCAACCTGGAGCTGGGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAGATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAGTCGTATGGTAACTATTTGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCACTGCTGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 38, 38, 35, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 38, 39, 19, 38, 39, 39, 39, 37, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 39, 39, 37, 37, 39, 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : 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false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "9" }, { "name" : "Source-Identity", "value" : "96.94%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : 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38, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKMSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 31, 35, 35, 37, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 38, 38, 37, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 37, 38, 36, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 38, 38, 38, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 38, 38, 39, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 36, 39, 39, 38, 38, 39, 39, 38, 39, 39, 36, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 37, 38, 36, 38, 36, 39, 38, 37, 37, 39, 39, 39, 38, 38, 38, 37, 38, 39, 37, 37, 39, 39, 38, 39, 36, 36, 35, 37, 34, 36, 33, 38, 39, 38, 38, 39, 38, 37, 37, 37, 35, 36, 37, 36, 39, 36, 37, 36, 36, 35, 38, 37, 38, 38, 37, 38, 38, 37, 37, 34, 37, 37, 32, 32, 33, 37, 33, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"translation", "value" : "INSGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARAITDAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP 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"value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVRPWALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARCNWDEYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5767 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13398:6223 (reversed)", "sequence" : 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"CTGCCAGGTCCAGCTTCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTATTTATTACTACGGTAGTAGCGGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCAGTCCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 34, 38, 38, 37, 39, 39, 39, 39, 39, 37, 39, 34, 36, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 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33, 33, 33, 33, 33, 37, 37, 32, 32, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELLKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTRYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNGKFKNKATVTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNPSNGHT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", 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"VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFMSRLSITKDNSKSQVFFKMNSLQADDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWRGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, 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ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.30%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGTSVKVSCKGSGYAFTNYLIEWVKQRPGQGLEWIGVINSGSGGTKYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARAITDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5797 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24870:6236 (reversed)", "sequence" : "TTCCGAGGTGAAGCTGATGGAGTCTGGGGCTGACCTTGTGAAGCCTGGGACTTCAGTGAAGCTGTCCTGTAAGGCTTCTGGCTACAACTTCACCAACTACTGGATAAACTGGGTGAGGCTGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTGGTTCTCACTACAATGACAAGTTCAAGAACAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGGCATCTGAGGACTCTGCTCTCTATTACTGTGCAAGAGATGGGAACTGGCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCGCTGTCTCTGCAGCTACAACAACAGCCCCATCAGCCCATCCCCTGCGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 37, 36, 39, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 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33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGADLVKPGTSVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVRLRPGQGLEWIGD" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYNFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYNDKFKNKATLTVDTSSSTAYMQLSSLASEDSALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IYPGSGGS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "44" }, { "name" : "Source-Identity", "value" : "85.03%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "4" }, { "name" : "Source-Identity", "value" : "92.31%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 305, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "in_frame", "value" : " " }, { "name" : "translation", "value" : "RDG" }, { "name" : "IMGT_allele", "value" : "IGHD2-15*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-15" }, { "name" : "Source-Sequence", "value" : "AF052381" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGADLVKPGTSVKLSCKASGYNFTNYWINWVRLRPGQGLEWIGDIYPGSGGSHYNDKFKNKATLTVDTSSSTAYMQLSSLASEDSALYYCARDGNWPFAYWGQGTLVAVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5799 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13205:6238 (reversed)", "sequence" : "ATTCGAGGTGAAGCTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACAATACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAAGGGGATCGATCTATGATGGTTACCTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCTATCCCCTGCTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 36, 38, 36, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 38, 37, 39, 39, 39, 39, 38, 37, 39, 37, 35, 39, 37, 37, 38, 39, 39, 38, 37, 37, 37, 37, 38, 38, 38, 38, 39, 39, 37, 37, 39, 39, 39, 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38, 38, 38, 38, 37, 38, 38, 33, 33, 33, 33, 32, 34, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IQYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRGSIYDGYLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "7" }, { "name" : "Source-Identity", "value" : "97.61%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YFDYW" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.78%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 320, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", 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"TTGCGAGGTGAAGCTGGTGGAATCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCCCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCTGTCTATCCATTGCGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 33, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 33, 38, 37, 38, 37, 39, 39, 34, 39, 39, 38, 38, 39, 39, 39, 38, 34, 38, 39, 38, 39, 39, 39, 36, 38, 36, 38, 38, 34, 38, 38, 38, 39, 39, 37, 33, 34, 37, 36, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 38, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 19, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 33, 36, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 36, 36, 37, 36, 38, 36, 36, 39, 39, 39, 37, 38, 39, 36, 39, 38, 38, 39, 38, 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32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "50" }, { "name" : "Source-Identity", "value" : "82.99%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYGT" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : 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"EVQRVESGGGLVQPGGSLRLSCTTSGFTFTDYFMTWVRQPPGKALEWLGFIRNKPSGYTTEYNPSVKGRFSISRDNSQGIFYLQMNTLRAEDSAIYYCARDYNGYFDFWGHGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5926 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11413:6311 (reversed)", "sequence" : "TACCGAGGTGATGTTGGTGGAGTCTGGGGGAGGTTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATACCATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTACTACCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAAGACACGGGGGTAGTAGAGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGCGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 33, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 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"value" : "0" }, { "name" : "translation", "value" : "ISNGGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHGGSRGYYFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVILVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTP EKRLEWVATISSGGGNTYYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-9*03 or IGHV5-9-5*01" }, { "name" : "IMGT_gene", "value" : "IGHV5-9 or IGHV5-9-5" }, { "name" : "Videntity", "value" : "99,66% (295/296 nt)" }, { "name" : "Source-Sequence", "value" : "X51721" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "93.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHGGSRGYYFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5927 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20585:6311 (reversed)", "sequence" : "GTTCGAGGTGCAGGTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGGAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGCCTAACTGGGCGAGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCGCAGCCAAAACGACACCCCCATCAGCCCATCCACTGGTAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 37, 34, 34, 34, 37, 37, 38, 38, 37, 38, 37, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 33, 37, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSGYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGSYT" } ] }, { 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EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "8" }, { "name" : "Source-Identity", "value" : "97.28%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "DYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "92.68%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYPIIDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "GDY" }, { "name" : "IMGT_allele", "value" : "IGHD2-13*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-13" }, { "name" : "Source-Sequence", "value" : "DQ288675" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "80.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQPGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"EVQLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDRGLLRFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5713 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15710:6189 (reversed)", "sequence" : "AGCGGAGGTGCAGCTGCAGCAGTCTGGAGCTGACCTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACCGGCTACAGATTCAATAGTTATTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAATTTCAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCGTATACATCCTCCAACACAGCCTACATGCAAATCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCGAGGCTCGGAATACGGAGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGTCCATCCCTTGTGGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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39, 38, 37, 38, 38, 38, 38, 38, 20, 37, 38, 37, 37, 37, 37, 37, 34, 19, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGDLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQTPDKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.90%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "95.74%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 304, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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"value" : "82.31%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 296, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.64%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPELVSLGLQ*RYPARLLMTHSLAITSAG*TRAMEMALSRLDLLFLTMVILTTTRTLRARPH*L*TSPSAQPTWSSTA*NLRTLWSIIVCLRYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5901 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18349:6299 (reversed)", "sequence" : "GGACGATGTGCAACTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTTTTACATGTTTTGGTTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATGGTGGTACTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGATATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCACCTCAGCCAAAACAACACCCCCATCAGCTTATCCACTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 20, 38, 34, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 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"value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { 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"ERR346596.5665 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22431:6165 (reversed)", "sequence" : "TACGCAGGTCCAACTGCAGCAGTCTGGAGCTGAACTGATGAAGCCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTACTGGCTACACATTCAGTAGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTAGTAGTATTAACTACAATGAGAGTTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCGGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTGCAAGATGGTTGTACGGTAGCTGCGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGCTTATCCACTGGTAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 34, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 37, 39, 39, 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39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 32, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNESFKGKATFTADTSSNTAYMQLSGLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSSSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARWLYGSCAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTSYWMYWLKQRP GQGLEWIGYINPTTGYTEYTQKFKDKATLTADTSSNSAYMQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "47" }, { "name" : "Source-Identity", "value" : "84.01%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 317, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : 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"TTTCGAGGTGAAGCTGGTGGAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGACTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAATTCAGGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCTGAGCCTGACATCTGAGGACTCTGCAGTCTATTATTGTGGAAGCTATGGTAACGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCTGCCCATCCCCTGATTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 32, 37, 34, 33, 32, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 37, 37, 38, 38, 39, 37, 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"[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1-58*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-58" }, { "name" : "Source-Sequence", "value" : "J04547" }, { "name" : "Source-Mismatches", "value" : "43" }, { "name" : "Source-Identity", "value" : "85.37%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 321, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M16163" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 329, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "DTAMGHYYYGMDVWGQGTTVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "DTAM" }, { "name" : "IMGT_allele", "value" : "IGHD5-5*01" }, { "name" : "IMGT_gene", "value" : "IGHD5-5" }, { "name" : "Source-Sequence", "value" : "AF062177" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "78.57%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGAELARPGASVKLSCKASGYTFTDYYINWVKQRTGQGLEWIGEIYPGSGNTYYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARSGDGYPRDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5668 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21215:6168 (reversed)", "sequence" : "GCCTGAGGTCCAGCTGCAACAGTCTATCCCCATCGGCCTATCCCCTGTGTAAGATCGGAAGAGCACACGTCTGAACTCTAGTCACAGTTCCGTATCTCGCATGCCGTCCTGTGCTTGAAAAAGAAAAGGACACGACCTTGAGTGGATTGGAGAGATTAATCCTAGCAATGGTGGTACGAACTTCAATGAGAAGTTCAAGAGCACGGCCACACTGTCTTTAGACTCCTCCTCCAGCACATCCTACATGAACCGCAGCAGCCTGTCTCTTGTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTTTTTCCCTACACGACGCTCTTCCGATCTGCCTGAGGTCCAGCTGCAACAGTCCATCCCCATCGGCCTATCCCCTGTGTA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 16, 32, 32, 37, 37, 32, 37, 33, 37, 37, 38, 38, 38, 38, 38, 38, 33, 34, 38, 38, 39, 39, 16, 18, 37, 18, 15, 38, 15, 15, 33, 32, 15, 32, 15, 15, 36, 33, 16, 16, 15, 37, 37, 37, 38, 33, 37, 17, 32, 37, 17, 37, 17, 16, 37, 32, 36, 38, 38, 15, 15, 32, 16, 37, 37, 15, 36, 15, 32, 15, 37, 16, 38, 16, 37, 38, 16, 16, 37, 17, 16, 35, 37, 38, 16, 33, 33, 17, 31, 14, 16, 33, 29, 15, 17, 33, 37, 14, 14, 30, 14, 16, 16, 29, 36, 36, 14, 30, 16, 16, 33, 16, 17, 33, 16, 15, 16, 33, 16, 37, 14, 14, 15, 15, 27, 27, 30, 37, 15, 27, 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38, 38, 38, 38, 38, 38, 38, 37, 34, 34, 34, 37, 37, 33, 34, 34, 34, 34, 34 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCKTS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "IQWVK*RPGQGLGWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "translation", 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"EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV14-3" }, { "name" : "Videntity", "value" : "99,32% (292/294 nt)" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "17" }, { "name" : "Source-Identity", "value" : "94.22%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", 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38, 38, 38, 33, 33, 33, 33, 32, 35, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYDGYYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARYDGYYGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5806 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: "ERR346596.5807 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13931:6245 (reversed)", "sequence" : "AACCCAGGTCCAGCTCCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTTTATGAACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGATAGTACTGAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAACAGACACATCCTCCAACACAGCCTACCTGCAGCTCAACAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATGCTTAGTACGTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCCTTGGGGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTP EKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYC AR" }, { "name" : "Videntity", "value" : "100,00% (294/294 nt)" }, { "name" : "allele", "value" : "IGHV5-9-1*01 or IGHV5S9*01" }, { "name" : "gene", "value" : "IGHV5-9-1 or IGHV5S9" }, { "name" : "Source-Sequence", "value" : "AY090904" }, { "name" : "Source-Mismatches", "value" : "12" }, { "name" : "Source-Identity", "value" : "95.92%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 324, "max" : 373, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { 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"name" : "translation", "value" : "IYPGSGGS" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTLVAVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : 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"name" : "translation", "value" : "DVKLVESGAELVKPGASVKLSCTASGFNINDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCASYYYGSSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5821 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23041:6254 (reversed)", "sequence" : "GCTTGAAGTGAAGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCTTCACTTGCACTGTCTCTGGGTTTTCATTAACCACCTATGGTGTACACTGGGTTCGCGAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGACACTACGGTAGTAACTACGGGGACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGCTCATCCATTGGTAA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 36, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 39, 37, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 36, 38, 39, 39, 39, 39, 37, 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"value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARHYGSNYGDWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 318, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WYFDVW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "WYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "0" 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"EVKLVESGPGLVAPSQSLSFTCTVSGFSLTTYGVHWVREPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARHYGSNYGDWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5822 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10835:6254 (reversed)", "sequence" : "GCTTGACGTGAAGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCTCATCCCCTGGGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33, 38, 37, 38, 38, 38, 36, 37, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 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39, 39, 39, 39, 38, 38, 38, 39, 38, 37, 37, 38, 39, 37, 38, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 38, 39, 38, 39, 39, 38, 39, 39, 38, 39, 38, 38, 38, 37, 36, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "15" }, { "name" : "Source-Identity", "value" : "94.85%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5823 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11365:6255 (reversed)", "sequence" : "TCGTGAAGTGAAGGTTGAGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGACTAGAATGGATTGGAGAAATTAATCCAGATTGCAGGACGATAAACTATAAGCCATCTCTAAAGGAGAAATTCATCATGTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATGACTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGCTTATCCCCTGCCGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 30, 33, 33, 33, 33, 34, 32, 37, 37, 37, 37, 37, 38, 33, 38, 38, 37, 38, 38, 37, 38, 38, 39, 39, 39, 39, 33, 20, 32, 32, 32, 32, 37, 34, 38, 37, 37, 34, 33, 37, 18, 18, 35, 18, 37, 38, 37, 36, 39, 39, 36, 30, 18, 37, 17, 32, 37, 38, 38, 39, 39, 39, 39, 37, 35, 18, 38, 37, 37, 32, 37, 20, 37, 38, 36, 36, 38, 34, 38, 39, 37, 39, 39, 39, 39, 38, 20, 35, 38, 36, 38, 39, 37, 39, 37, 37, 39, 18, 33, 38, 39, 36, 38, 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34, 37, 38, 38, 35, 17, 17, 39, 39, 37, 32, 32, 39, 37, 38, 34, 38, 37, 38, 39, 37, 38, 38, 37, 37, 16, 38, 38, 38, 38, 32, 32, 35, 32, 30, 35, 35, 32, 32, 32, 32, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MTWVRQAPGKGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "INPDCRTI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGYYGWMTY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV3-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-7" }, { "name" : "Videntity", "value" : "100,00% (296/296 nt)" }, { "name" : "Source-Sequence", "value" : "AF174030" }, { "name" : "Source-Mismatches", "value" : "72" }, { "name" : "Source-Identity", "value" : "75.68%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 313, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 303, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTTALYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "GTT" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "AB050083" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKVEESGGGLVQPGGSLKLSCAASGFDFSGYWMTWVRQAPGKGLEWIGEINPDCRTINYKPSLKEKFIMSRDNAKNTLYLQMSKVRSEDTALYYCARNGYYGWMTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5827 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6436:6256 (reversed)", "sequence" : "AGGTCAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTTGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTCATCCAGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTATATTACTGTACAAGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCATTGTCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 33, 33, 32, 33, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 33, 37, 38, 38, 39, 39, 39, 37, 38, 39, 38, 38, 38, 37, 38, 39, 38, 38, 37, 39, 39, 39, 39, 39, 39, 35, 38, 39, 38, 39, 38, 30, 36, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 38, 39, 39, 39, 38, 35, 38, 38, 39, 39, 37, 17, 18, 37, 18, 33, 38, 35, 37, 33, 37, 37, 39, 39, 38, 39, 39, 37, 37, 31, 38, 38, 39, 39, 37, 38, 38, 39, 39, 37, 39, 38, 39, 38, 39, 34, 38, 38, 39, 36, 17, 30, 34, 39, 39, 38, 39, 38, 39, 38, 39, 39, 34, 38, 38, 34, 36, 34, 17, 37, 37, 39, 38, 39, 39, 39, 39, 39, 39, 38, 34, 37, 38, 39, 17, 37, 38, 38, 38, 17, 37, 38, 39, 15, 37, 38, 37, 39, 39, 38, 38, 37, 37, 39, 39, 38, 37, 38, 39, 39, 39, 39, 39, 39, 33, 16, 20, 38, 38, 38, 39, 39, 37, 39, 38, 38, 39, 24, 36, 36, 15, 36, 36, 36, 38, 39, 38, 39, 38, 39, 39, 37, 39, 39, 39, 39, 37, 34, 34, 34, 38, 34, 37, 34, 34, 33, 23, 37, 38, 38, 38, 38, 38, 30, 37, 37, 38, 38, 38, 33, 37, 38, 33, 37, 17, 37, 34, 10, 30, 33, 16, 14, 37, 37, 15, 34, 33, 19, 37, 38, 38, 38, 18, 34, 35, 37, 39, 38, 37, 38, 14, 18, 39, 38, 39, 36, 30, 33, 19, 19, 19, 30, 30, 19, 37, 38, 36, 39, 39, 39, 39, 38, 37, 37, 35, 37, 19, 36, 33, 37, 19, 33, 31, 37, 37, 39, 37, 36, 36, 37, 33, 38, 39, 37, 37, 31, 38, 37, 38, 39, 37, 33, 18, 39, 38, 37, 35, 39, 39, 39, 39, 37, 37, 37, 37, 38, 39, 39, 37, 37, 18, 36, 16, 39, 39, 38, 34, 39, 36, 36, 36, 17, 38, 38, 39, 38, 36, 36, 32, 36, 19, 37, 32, 36, 34, 37, 37, 37, 37, 37, 33, 37, 33, 32, 32, 32, 30 ], "chromatogram" : null }, 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"[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "35" }, { "name" : "Source-Identity", "value" : "88.10%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "3" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "M16072" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 346, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELVKPGASVKISCKASGYSFTDYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSSTAHMELLSLTSEDSAVYYCGSYGNAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5835 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37, 39, 38, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 37, 38, 38, 38, 38, 37, 38, 39, 39, 37, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 37, 37, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 35, 39, 38, 38, 38, 38, 35, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 37, 37, 37, 39, 39, 38, 38, 39, 39, 39, 38, 37, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 33, 39, 37, 39, 38, 38, 33, 33, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 37, 37, 37, 36, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 35, 38, 38, 39, 39, 38, 39, 39, 39, 38, 38, 39, 39, 38, 38, 37, 37, 38, 39, 39, 36, 32, 39, 39, 39, 37, 39, 37, 37, 36, 37, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 32, 32, 32, 18 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSMKLSCVAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVRQSPEKGLEWVAE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "HYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRLKSNNFAT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTTLTVST" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRVLRNFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP GKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVY YCTT" }, { "name" : "IMGT_allele", "value" : "IGHV3-15*01" }, { "name" : "IMGT_gene", "value" : "IGHV3-15" }, { "name" : "Videntity", "value" : "100,00% (302/302 nt)" }, { "name" : "Source-Sequence", "value" : "M24236" }, { "name" : "Source-Mismatches", "value" : "73" }, { "name" : "Source-Identity", "value" : "75.83%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 315, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.73%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 305, "max" : 313, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNFATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCVRVLRNFDYWGQGTTLTVST" } ] } ] }, { "sequence" : { "name" : "ERR346596.5932 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9877:6313 (reversed)", "sequence" : "CATAGACGTGATGTTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGACTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGATATTACTACGGCTTCCTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGCCCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 33, 33, 32, 37, 37, 38, 38, 38, 38, 36, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 37, 37, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 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32, 34, 34, 34, 34, 34, 34, 34, 34, 34, 34 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSTLMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYYYGFLDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 306, "max" : 353, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.75%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSTLMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARYYYGFLDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5933 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20646:6313 (reversed)", "sequence" : "AATGATGTGAAGCTTCAGGAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACGATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACGAAGATAGGCTACGGGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCTCATCCCTTGAATG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 33, 38, 37, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 34, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 33, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 37, 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38, 38, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 4, "max" : 78, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 103, "max" : 153, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRSGQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 79, "max" : 102, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTEYI" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 178, "max" : 291, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 154, "max" : 177, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FYPGSGSI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 331, "max" : 363, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LQD" }, { "name" : "IMGT_allele", "value" : "IGHD2-2*02" }, { "name" : "IMGT_gene", "value" : "IGHD2-2" }, { "name" : "Source-Sequence", "value" : "AF052386" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 4, "max" : 363, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLQESGAELVKPGASVKLSCKASGYTFTEYIIHWVKQRSGQGLEWIGWFYPGSGSIKYDEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRLRAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5934 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:25530:6314 (reversed)", "sequence" : "TCTAGAGGTGCAGGTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATAAGTGATGGTGGTGGTTACACCTACTATCCAGACAGTGTGTGGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAATAACCTGTACCTGCAAATGAGTAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAAGGTCGGGAGAGAGGTATGGCGCTATGGACTACTGGGGTCAAGGAACCTCAGTCAACGTCTTCTCAGCCAAAACGACACCCCCATCGGTTTATCCCCTGCCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 37, 37, 37, 37, 33, 37, 37, 37, 37, 33, 38, 37, 36, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 38, 38, 37, 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37, 38, 38, 38, 37, 37, 38, 32, 32, 33, 35, 35, 32, 33, 32, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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"AGGGCAGGTCCAACTGCAGCAACCAGGACCTGGCCTGGGGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCAGCTTATCCATTGGCGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 33, 33, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 34, 36, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 37, 37, 37, 38, 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37, 39, 39, 38, 37, 38, 37, 36, 37, 36, 39, 36, 36, 37, 34, 35, 39, 38, 37, 38, 37, 37, 33, 38, 36, 37, 37, 32, 31, 33, 33, 33, 33, 33, 33, 33, 33, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASMKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSHGKNLEWIGL" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYT" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPYNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDYYGFSYGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "26" }, { "name" : "Source-Identity", "value" : "91.16%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 319, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 309, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGGTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCARDYYGFSYGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5950 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21866:6322 (reversed)", "sequence" : "TCTACAGTTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGACTTCAGTGAAGTTGTCCTGCACGGCTTCTGGCTACACCTTCACCACCTACTATATGTACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAACAATGGTGGTACTAACTTCAAAGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCATACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTACAAGAGGACGCACCTGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCAGCCTATCCATTGCTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 37, 39, 39, 39, 38, 39, 38, 39, 39, 38, 36, 38, 34, 38, 39, 37, 39, 39, 38, 39, 37, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QFQLQQPGAELVKPGTSVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTTYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPNNGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGRTWDFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "38" }, { "name" : "Source-Identity", "value" : "87.07%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FDYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "IMGT_note", "value" : "null may be also solution" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" 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"QFQLQQPGAELVKPGTSVKLSCTASGYTFTTYYMYWVKQRPGQGLEWIGEINPNNGGTNFKEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRGRTWDFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5951 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6941:6323 (reversed)", "sequence" : "TTGCGACGTGAAGTTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGACTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTCGAATGGATTGGAGAAATTAATCCAGATAGCAGTACGATAAACTATACGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAGCGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTTACTACGGCTGGATTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCTGCCCATCCACTGTGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 34, 34, 34, 33, 32, 32, 38, 38, 38, 38, 38, 36, 37, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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37, 37, 38, 36, 38, 38, 38, 39, 39, 39, 39, 39, 38, 36, 37, 38, 39, 39, 39, 39, 38, 39, 36, 35, 20, 32, 39, 39, 39, 38, 38, 20, 39, 39, 37, 39, 39, 37, 37, 33, 39, 38, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 38, 37, 38, 32, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 32, 32, 31, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVKLVESGGGLVQPGGSLRLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : 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"DVMLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARDLITTATSFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5958 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:7094:6327 (reversed)", "sequence" : "GTGGCAGGTGCAGCTGAAGCAGTCTCTTAGACCTTTTCCCGCCTGGGCTCCGAGAGCCCACTCTTACACTTGTGCTCTCTTTTTGGGTTTTATGAACACAAAGGTCTGTTGAAACTTGCTTTATTTAAACCCAACAGTAAATCAGAAGCACCTTTTTCCTTATGTGGTTGTAGTCGCTCTGAAGTGGGGTGCTCTCTCCTGGAACCTGAACTGTTGTGTCAGGAGGAAAGCGTCAAGGATTCTCTCTTGCTTTATTAAAACAGAATAATTTCCTTGGATAAGCATCGTCGTTAACTCTTTTGGAAGATGCCTTTTTAACCAGACATATTTTACAGAAATAAAAGAACTTGCCAAGTCTTATTTAGTTGTAGCTCCAGTTGCATTTCCCCATCTGCATCCCCTGGCCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 32, 32, 16, 37, 32, 35, 29, 16, 34, 31, 33, 37, 38, 34, 37, 38, 16, 37, 34, 15, 36, 38, 39, 18, 37, 18, 18, 18, 16, 16, 33, 16, 16, 16, 33, 17, 16, 16, 15, 32, 15, 33, 14, 14, 14, 14, 15, 14, 14, 14, 14, 32, 14, 32, 32, 15, 37, 14, 14, 15, 33, 37, 33, 16, 37, 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37, 39, 39, 39, 38, 17, 35, 39, 38, 35, 17, 17, 17, 33, 38, 36, 37, 36, 37, 33, 17, 37, 38, 37, 36, 33, 17, 35, 14, 16, 16, 15, 37, 37, 37, 38, 37, 16, 37, 16, 17, 36, 33, 33, 16, 16, 38, 38, 33, 38, 33, 37, 38, 37, 15, 38, 34, 37, 16, 16, 16, 16, 38, 38, 37, 15, 15, 36, 32, 16, 33, 16, 37, 32, 32, 33, 34, 32, 32, 35, 32, 32, 32, 32, 32, 29, 32, 30, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 1, "max" : 30, "direction" : "Right", "truncatedMin" : true, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "Status", "value" : "Truncated" }, { "name" : "endMotifDifferences", "value" : "2" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 64, "max" : 171, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "LHLCSLFGFYEHKGLLKLALFKPNSKSEAPFSLCGC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 31, "max" : 63, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "TFSRLGSESPL" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 192, "max" : 224, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "LSPGT*TVVSG" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 172, "max" : 191, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "2" } ] } ] }, { "sequence" : { "name" : "ERR346596.5959 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22544:6327 (reversed)", "sequence" : "GAACCAGGTGCAGCTGAAGGAGTCTGGGCCTGAACTGGCGAGGCCTGGGGAATCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATCACTACTTATTCTGCTAATGCAAAGTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGTACAGCCTATTTGGAACTTGCCAGATTGACATCTGAGGATTCTGACATCTATTACTGTGCAAGAGGTGGGACAGGGCCCTTTCCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGTCCATCCCTTGTGGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 32, 37, 33, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 37, 39, 39, 39, 38, 39, 38, 38, 37, 38, 38, 38, 39, 38, 39, 38, 38, 37, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 34, 38, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 33, 39, 39, 38, 39, 39, 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33, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELARPGESVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "KYNQKFKGKATMTVDKSSSTAYLELARLTSEDSDIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "ITTYSANA" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGGTGPFPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "56" }, { "name" : "Source-Identity", "value" : "80.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.18%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 300, "max" : 306, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GTGDFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-1" }, { "name" : "Source-Sequence", "value" : "AJ279028" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPELARPGESVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVITTYSANAKYNQKFKGKATMTVDKSSSTAYLELARLTSEDSDIYYCARGGTGPFPYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5960 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:6467:6327 (reversed)", "sequence" : "TGACGAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGAGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAAATATTGATCCTTACTATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCAGAGGTACGACGAGAGGGCTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCTATCCCCTGTCAT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 33, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 35, 37, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 37, 36, 38, 38, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 33, 38, 38, 39, 38, 38, 39, 39, 39, 39, 39, 37, 38, 36, 39, 39, 38, 37, 38, 38, 39, 39, 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39, 39, 39, 39, 38, 38, 38, 36, 38, 38, 39, 38, 37, 37, 33, 38, 38, 36, 35, 38, 38, 33, 32, 33, 32, 33, 37, 37, 32, 30, 32, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQSNGKSLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYN" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPYYGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSEVRREGYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "30" }, { "name" : "Source-Identity", "value" : "89.80%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 320, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELEKPGASVKISCKASGYSFTGYNMNWVKQSNGKSLEWIGNIDPYYGGTSYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSEVRREGYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.6041 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21978:6383 (reversed)", "sequence" : "GCGAGAGGTGCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAATATTTATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTACGACTGGGACGAGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACTCCCATCGGCCCATCCCCTGGCGC", "circular" : false, "sequenceType" : "Nucleotide", 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311, "max" : 318, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYYDSPGYWGQGTLVTVSS" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AF062280" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "87.50%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPELVKPGTSVKMSCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARSEGRYYFAMNYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.6059 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36, 36, 38, 38, 39, 38, 38, 38, 37, 38, 37, 38, 38, 38, 37, 33, 32, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELMKPGASVKISCKAT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGHGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFSSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ILPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"value" : "95,24% (280/294 nt)" }, { "name" : "Source-Sequence", "value" : "AY014883" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.92%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 291, "max" : 299, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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"TCGGGAGGTGCAGCTTCAGGAGTCTATCCCCGTCTGCTTATCCCTTGGATTAGATCGGAAGAGCACCTGTCTGGACTCCAGTTACAGTTTCGTTTGTTGTGTGCTGTATTGTGTTTGTCAGGATCCAGAGCAGGGTCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATTTACTATGCTGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCAAGAACACCCTGTACCTGCAAATGACCAGTCTAAGGTCTGAGGACACGACCATGTATTACTGTGTATTTAATGATACTGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCGTCCGATCTTCGGGATGTGCAGCTTCAGGAGTCCATCCCCATCTGCTTATCCCTTGCATT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 29, 16, 16, 29, 29, 16, 32, 32, 16, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 37, 18, 33, 18, 15, 16, 15, 15, 33, 36, 38, 15, 32, 32, 35, 17, 33, 16, 16, 33, 32, 37, 38, 16, 33, 33, 32, 16, 32, 16, 32, 35, 37, 37, 36, 38, 30, 15, 15, 33, 16, 33, 14, 15, 33, 37, 16, 32, 33, 15, 16, 33, 33, 33, 16, 16, 33, 35, 16, 17, 33, 35, 31, 37, 37, 17, 31, 29, 15, 15, 14, 14, 15, 15, 29, 33, 14, 15, 33, 16, 17, 33, 16, 16, 17, 33, 17, 29, 33, 15, 33, 15, 38, 33, 17, 33, 35, 15, 16, 33, 15, 15, 16, 33, 16, 27, 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33, 15, 38, 39, 38, 37, 38, 34, 37, 16, 16, 16, 16, 16, 37, 32, 32, 32, 35, 16, 37, 32, 32, 16, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQESIPVCLSLGLDRKSTCLDS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LYCVCQDPEQGLEWVAY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { 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"truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISSGGTNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGTSVTFSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRRGIYDERTAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, 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"TACACAGGTCCACGTGAAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGCAATTTCAAGGATAAAGCCACACTGACTACAGACAAGTCCTCCACCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAGAGGGGGGAGGCTAACTGGGTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACGACACCCGCATCAGCCCATCCCCTGCTGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 32, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 37, 37, 39, 38, 39, 39, 39, 38, 39, 37, 38, 37, 37, 39, 38, 39, 38, 39, 39, 39, 38, 39, 33, 38, 39, 39, 39, 37, 39, 38, 39, 38, 39, 37, 37, 39, 39, 37, 39, 39, 37, 36, 36, 39, 39, 39, 39, 39, 39, 37, 39, 36, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 37, 38, 19, 37, 39, 39, 38, 39, 39, 37, 39, 39, 38, 36, 18, 37, 38, 39, 39, 39, 38, 39, 38, 38, 39, 39, 39, 39, 39, 38, 37, 37, 38, 38, 39, 38, 39, 37, 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38, 38, 38, 38, 38, 37, 36, 33, 33, 33, 33, 33, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVHVKQSGAELVRPGSSVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MNWVKQRPGQGLEWIGQ" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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"ACGGCAGGTCCAGCTGCAGCAGTCTGGGGCTGAGCTGGCAAGACCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACAACTTTACTACCCACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGGGCTATTTATCCTGGAGATGGTGATACTAGGTACACTCAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACAGCCTACATGCAACTCAGCGACTTGGCATCTGAGGACTCTGCGGTCTATTACTGTGCAAGAGGGGACTACGGCTACCACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCACTGCCTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 33, 33, 35, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 39, 38, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 38, 39, 39, 38, 33, 38, 37, 39, 38, 39, 38, 38, 38, 38, 39, 38, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 33, 39, 38, 39, 39, 39, 39, 39, 38, 36, 39, 39, 37, 37, 38, 39, 37, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 37, 38, 35, 37, 39, 39, 39, 38, 37, 39, 39, 37, 37, 37, 36, 38, 37, 18, 33, 38, 39, 14, 38, 38, 39, 39, 38, 14, 17, 37, 37, 37, 36, 38, 39, 38, 39, 37, 39, 39, 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38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELARPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MQWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : 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[ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGDYGYHWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQSGAELAKPGASVKMSCKASGYTFTAYWMHWVKQRP GQGLEWIGYINPNTGYTEYNQNFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC TR" }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : 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"TAAGCAGGTCCACGTGAAGCAGTCTGGGGCAGAGCTTGCGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAACAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTGATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTACTAAACCCTCTTTTTACTACGGTAGTAGTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGTCTATCCCCTGAGTG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 37, 37, 37, 37, 38, 36, 37, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 37, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 38, 38, 38, 36, 39, 39, 38, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 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"ATCTGAGGTTCAGCTTCAGCAGTCTGGAGATGATCTGGTAAAGCCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATTAACTGGATAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATAGGACGTATTCCTCCTGGAAGTGGTACTACTTACTACAATGAAATGTTCAAGGGCAAGGCAACACTGACTGTAGACACATCCTCCACCACAGCCTACATTCAGCTCAGCAGCCTGTCATCCGAGGACTCTGCTGTCTATTTCTGTGCAAGAGGGAGTTATTACTACGGTAGTAGCTCCCCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCAGTTTATCCCCTGATGA", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 33, 37, 37, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 37, 39, 39, 38, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 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"TGATGAAGTGATGCTGGTGGAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTTTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCATCTATTACTGTGCAAGAGGGCGATATGATTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCAGTCTATCCCTTGCGGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 37, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 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33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARGRYDFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : 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false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARGRYDFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5839 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14822:6264 (reversed)", "sequence" : "GGGGCAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAAGATACTATAGGTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCAGTCCATCCATTGATGT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 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], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQTPVHGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYE" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPETGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRYYRYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYRYPYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YYRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "M13328 (2)" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGASVTLSCKASGYTFTDYEMHWVKQTPVHGLEWIGAIDPETGGTAYNQKFKGKATLTADKSSSTAYMELRSLTSEDSAVYYCTRYYRYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5961 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:22356:6327 (reversed)", "sequence" : "ACTACAGGTTCAGCTCCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTTAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCAGTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTAGATGTAACTGGGACGAGTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGTCCATCCCTTGCTCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 32, 33, 33, 32, 37, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 37, 38, 38, 38, 38, 39, 39, 39, 39, 39, 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"QVQLQQPGAELARPGASVKLSCKASGYTFTDYYINWVKQRTGQGLEWIGEIYPGSGNTYYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARSGDGYPRDAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5968 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21947:6332 (reversed)", "sequence" : "CCTTCAGGTCCAACTGCAGCAGCCAGGACCTGAGCTGGTGAAACCTGGGGCCTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGGAGCAGAGCCATGGAAAGAGCCTTGAATGGATTGTATATATTTATCCTCACAATGGTGGTAATGGCTACAACCAGAAGTTCAAGAACAAGGCCACATTGACTGTAGACAGTTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGATCGAGGGGTACTACGGCTACGACTTACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCTACAACAACAGCCCCATCGGCCCATCCCCTGTCGC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 32, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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"ATTTCAGGTGCAGCTGAAGGAGTCTGGAGGAGGCCTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTGCTGCGCAAGAGATAGAGGGTTACTACGCTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGCTTATCCATTGACAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 36, 37, 37, 39, 38, 39, 39, 38, 39, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 38, 39, 38, 39, 39, 39, 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37, 38, 37, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 37, 32, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYCC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 332, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 331, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDRGLLRFDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "18" }, { "name" : "Source-Identity", "value" : "94.08%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 365, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "2" }, { "name" : "Source-Identity", "value" : "96.15%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 364, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYCCARDRGLLRFDYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5973 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:18080:6334 (reversed)", "sequence" : "TGTAGAGGTGCAGGTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTCACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATACACTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGAAGAGTGCGGGGTTACGACGTCCCAGCCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACGACACCCCCATCTGCCCATCCCTTGGACC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 33, 33, 37, 37, 37, 37, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 32, 37, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 20, 37, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 37, 39, 39, 39, 39, 39, 38, 39, 37, 36, 39, 37, 37, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 36, 38, 39, 39, 37, 38, 39, 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36, 36, 38, 38, 39, 38, 37, 38, 37, 38, 37, 38, 38, 38, 37, 37, 32, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 338, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 337, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRVRGYDVPAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQF PGHKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC A" }, { "name" : "IMGT_allele", "value" : "IGHV3-1*02" }, { "name" : "IMGT_gene", "value" : "IGHV3-1" }, { "name" : "Videntity", "value" : "99,66% (292/293 nt)" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "6" }, { "name" : "Source-Identity", "value" : "97.95%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQVVESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGYIHYSGSTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARRVRGYDVPAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5974 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14141:6334 (reversed)", "sequence" : "CGATGAGGTTCAGCTCCAGCAGTCTGGAGCTGAGGTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAATGGATAAAACGGAGGCCTGGACAGGGCCTTGAGTGGATTGGACTGATTAATCCTGGAAGTGGTGGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGTACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGTATTGGGACGTCCTTTCTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCTGTTCATCCATTGCCAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 33, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 38, 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"EVMLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVATISDGGGYTYYPVSVWGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARSGERYGAMDYWGQGTSVTVFS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5977 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:11673:6337 (reversed)", "sequence" : "TCTGGAAGTGAAGTTGGTGGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTGGATACTGGATGAGTTGGGTCCGGCAGGCTCCAGGGAGAGGGCTAGAATGGATTGGAGAAATTAATCCAGATGGCGTTAGGATAAACTATACGCCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAACGCCAAAAATACGCTGTACCTGCAAGTGAGTAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGCAAGAAATGGTGACTACTGGTTTCCTTATTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCTACAACAACAGCCCCATCGGCTCATCCACTGGACT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 37, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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38, 36, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 36, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQAPGRGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFDFSGYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "2" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYTPSLKDKFIISRDNAKNTLYLQVSKVRSEDTALYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "2" }, { "name" : "translation", "value" : "INPDGVRI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARNGDYWFPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP 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"gene", "intervals" : [ { "min" : 300, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "TVTTFPVDYWGQGTLVTVSS" }, { "name" : "translation", "value" : "TVT" }, { "name" : "IMGT_allele", "value" : "IGHD4-17*01" }, { "name" : "IMGT_gene", "value" : "IGHD4-17" }, { "name" : "Source-Sequence", "value" : "AF062181" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "90.91%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGRGLEWIGEINPDGVRINYTPSLKDKFIISRDNAKNTLYLQVSKVRSEDTALYYCARNGDYWFPYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5978 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13811:6337 (reversed)", "sequence" : "TGTTCAGGTTCAACTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTCATTGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGCTTAATCCTGGAAGTGGTGGTACTAACTACAATAAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGAGATGGTAACTGGTTTCCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCAAAAGCAACACCCCCATCTGTCCATCCATTGAGCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 35, 35, 35, 34, 37, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 33, 38, 39, 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32, 36, 36, 32, 36, 15, 16, 38, 38, 38, 38, 33, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 32, 29, 16, 16, 16, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IEWVKQRPGQGLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYF" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNKKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "LNPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDGNWFPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "39" }, { "name" : "Source-Identity", "value" : "86.69%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "97.83%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 307, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVRPGTSVKVSCKASGYAFTNYFIEWVKQRPGQGLEWIGVLNPGSGGTNYNKKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARDGNWFPYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5979 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36, 36, 15, 38, 39, 38, 38, 38, 38, 37, 16, 37, 16, 38, 38, 37, 37, 37, 37, 31, 37, 32, 29, 16, 16, 16, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPGLVQPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQSPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTTYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DYNAAFISRLNISKDNSKSQVFFEMNSLQTNDTAIYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWTGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], 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"value" : "100,00% (291/291 nt)" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 309, "max" : 356, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "gene", "value" : "IGHD-ST4" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "YFDYWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "putative_limit", "value" : "5' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 301, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : 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"GATGGAGGTCCAGCTGCAACAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGTTTTTGGCTTCAACATTAAATCCACCTATATACACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATGGGTTGATCCTGCGAATGGTAATAGTAAATGTGACCCGAGGTTCCAGGGCAAGGCCACTATAACAGCAGACTCATCTTCCAACACAGCCTACCTGCAGCTCAGCAGTCTGACATCTGAGGACACTGCCGTCTATTACTGTGCTCTCCATTACGCCTACCAGTTTGACTACTGGGGCCAAGGCACCACTGTCACAGTCTCCTCAGCCAAAACAACAGCCCCATCGGCCCATCCACTGTGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 34, 34, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 38, 39, 39, 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37, 37, 37, 33, 33, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVKPGASVKLSCTVF" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHWVKQRPEQGLEWIGW" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : 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BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14829:6346 (reversed)", "sequence" : "GGCACAGGTCCAGCTGCAGCAATCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTGCCGCTTATTACTACGGTAGTAGCCAGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACAGCCCCATCAGCCTATCCCTTGCTTT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 37, 37, 32, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 24, 39, 39, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 36, 38, 38, 39, 39, 39, 39, 38, 39, 39, 38, 38, 37, 38, 38, 38, 38, 38, 38, 37, 38, 38, 38, 38, 38, 39, 38, 39, 38, 38, 38, 39, 37, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 38, 38, 39, 38, 39, 38, 39, 39, 39, 39, 36, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 37, 37, 39, 39, 38, 36, 39, 34, 39, 38, 38, 39, 39, 38, 37, 39, 39, 39, 37, 39, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPEQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFNIKDTY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "KYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IDPANGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AAYYYGSSQFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCTASGFNIKDTYMHWVKQRP EQGLEWIGRIDLANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV14-3*02" }, { "name" : 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"qualifiers" : [ { "name" : "translation", "value" : "YYGSSYWYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "YYGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCAAYYYGSSQFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5991 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:8011:6348 (reversed)", "sequence" : 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39, 38, 37, 38, 32, 38, 38, 38, 38, 38, 34, 32, 32, 33, 37, 37, 37, 37, 32, 29, 32, 18, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWIKQRPGQGLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTNYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "YYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IAPGSGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERYGYDGWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC ARSNYYGGS" }, { "name" : "translation", "value" : "EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKXRP GQGLEWIGYLIPGNVYTKYNEKFKGKTTLTVDKSSXTAYMQLRGLTSEDSAVYFC AR" }, { "name" : "CDR_length", "value" : 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: false } ], "qualifiers" : [ { "name" : "translation", "value" : "GDYDMGYWGQGTLVTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "GDYD" }, { "name" : "IMGT_allele", "value" : "IGHD3-22*01" }, { "name" : "IMGT_gene", "value" : "IGHD3-22" }, { "name" : "Source-Sequence", "value" : "AY392876" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "76.92%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGDDLVKPGASVKLSCKASGYTFTNYWINWIKQRPGQGLEWIGRIAPGSGSTYYNEMFKGKTTLTVDTSSSTAYIQLSSLSSEDSDVYFCARERYGYDGWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5993 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:15112:6349 (reversed)", "sequence" : "GGGGGAGGTGCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAAATATTTATCCTTCTGCTAGTTATACTAACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAAGACTCTGCGGTCTATTACTGTACAAGAGGCGATGATTACTACGGAGGGGCCCCCTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGAGCC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 34, 34, 34, 33, 32, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 38, 39, 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34, 38, 38, 38, 34, 38, 37, 33, 33, 33, 37, 37, 37, 37, 33, 32, 32, 29, 29 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INWVKQRPGQGLEWIGN" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IYPSASYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTTLTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "TRGDDYYGGAPY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "34" }, { "name" : "Source-Identity", "value" : "88.44%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWGQGTTLTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ2*01" }, { "name" : "IMGT_gene", "value" : "IGHJ2" }, { "name" : "Source-Sequence", "value" : "AB016619" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 307, "max" : 315, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYGFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YY" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "Z49935" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSASYTNYNQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTRGDDYYGGAPYWGQGTTLTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5994 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:23533:6349 (reversed)", "sequence" : "ACCCGAGGTGCAGCTCCAGCAGTCTGGGCCTGAGCTGGTGAGGCCTGGGGTCTCAGTGAAGATTTCCTGCAAGGGTTCCGGCTACACATTCACTGATTATGCTATGCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTATTAGTACTTACTCTGGTAATACAAACTACAACCAGAAGTCTAAGGGCAAGGCCACAATGACTGTAGACAAATCCTCCAGCACAGCCTATATGGAACTTGCCAGATTGACATCTGAGGATTCTGCCGTCTATTACTGTGCAAGATACGGCTACGGTAGTAGCTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGCTCATCCCTTGATCG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 35, 33, 34, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 38, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 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39, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 33, 33, 37, 37, 37, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQSHAKSLEWIGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYTFTDYA" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNQKSKGKATMTVDKSSSTAYMELARLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISTYSGNT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARYGYGSSYYAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "48" }, { "name" : "Source-Identity", "value" : "83.67%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 317, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYAMDYW" }, { "name" : "translation", "value" : "YYAMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGSTLAFASWGHGTLVTVSA" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YGS" }, { "name" : "IMGT_allele", "value" : "IGHD1-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-1" }, { "name" : "Source-Sequence", "value" : "X53483" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLQQSGPELVRPGVSVKISCKGSGYTFTDYAMHWVKQSHAKSLEWIGVISTYSGNTNYNQKSKGKATMTVDKSSSTAYMELARLTSEDSAVYYCARYGYGSSYYAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5995 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:24187:6349 (reversed)", "sequence" : "GCAGGATGTAAAGCTTCAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTATATTGGGCTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGGTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTCTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTATACGGTAGTAGCTACGACCCCTATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCGGCCCATCCCCTGGCTC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 34, 34, 34, 34, 34, 33, 37, 37, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 37, 38, 37, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 17, 37, 36, 37, 38, 38, 38, 36, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 36, 39, 37, 39, 39, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 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37, 37, 38, 37, 33, 37, 37, 37, 37, 37, 32, 32, 29, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLMESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARERQPLEGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% 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"name" : "translation", "value" : "MCWIRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISDGGGYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VRSGERYGGMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYAFTNYL" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPGSGGT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRDGNYAWFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 297, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC ASGGWDYFDYWGQGTTLTVSS" }, { "name" : "translation", "value" : "EVQLQQSGPELVKPGASVKMSCKVSGYTFTSYVMHWVKQRP GQGLEWIGYFNPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYC A" }, { "name" : "CDR_length", "value" : "[8.8.10]" }, { "name" : "IMGT_allele", "value" : "IGHV1S136*01" }, { "name" : "IMGT_gene", "value" : "IGHV1S136" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "M94153" }, { "name" : "Source-Mismatches", "value" : "40" }, { "name" : "Source-Identity", "value" : "86.35%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 316, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 302, "max" : 310, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YGNYYAMDYWGQGTSVTVSS" }, { "name" : "translation", "value" : "YGN" }, { "name" : "IMGT_allele", "value" : "IGHD2-1*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-1" }, { "name" : "Source-Sequence", "value" : "X05878; Y00330" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "88.89%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGSGGTNYNEKFKGKATLTADKSSSTAYMQLSSLTSDDSAVYFCARRDGNYAWFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5905 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10325:6301 (reversed)", "sequence" : "GGCGGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAACACCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCAAGAGATTTCTACTATAGGTACCCTTACTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGCTTATCCCTTTGCAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 31, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 37, 38, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 35, 37, 39, 39, 39, 39, 39, 39, 37, 39, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 33, 39, 39, 39, 38, 39, 39, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 38, 38, 38, 38, 38, 38, 38, 38, 39, 37, 39, 37, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 37, 38, 39, 38, 38, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 38, 38, 37, 38, 31, 37, 33, 35, 39, 37, 39, 38, 38, 36, 37, 38, 38, 38, 39, 39, 39, 38, 37, 37, 36, 37, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 39, 39, 38, 37, 38, 37, 39, 39, 39, 39, 39, 39, 37, 35, 16, 39, 39, 39, 39, 39, 37, 36, 35, 34, 34, 38, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 39, 38, 39, 35, 36, 38, 39, 38, 37, 37, 33, 35, 39, 39, 39, 39, 37, 39, 38, 37, 16, 37, 39, 37, 37, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 38, 39, 39, 39, 39, 39, 38, 38, 39, 38, 35, 37, 39, 37, 37, 37, 38, 36, 34, 38, 38, 38, 38, 37, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 37, 36, 39, 38, 38, 38, 37, 36, 35, 37, 36, 38, 38, 37, 37, 37, 36, 32, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 36, 37, 38, 38, 36, 36, 38, 38, 38, 38, 37, 37, 34, 32, 30, 37, 37, 37, 37, 37, 33, 32, 32, 29, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MSWVRQPPGKALEWLGF" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFTDYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 185, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 184, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IRNKANGYTT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 344, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 299, "max" : 343, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARDFYYRYPYWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.72%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 325, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "98.08%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 310, "max" : 323, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YYRYVLDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YYRY" }, { "name" : "IMGT_allele", "value" : "IGHD2-14*01" }, { "name" : "IMGT_gene", "value" : "IGHD2-14" }, { "name" : "Source-Sequence", "value" : "FJ755846" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "92.86%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVQLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDFYYRYPYWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5907 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:14452:6301 (reversed)", "sequence" : "TCCCGACGTGATGCTGGTGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAACTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGATGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTCAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGGATTACTACGGCTACGGGGGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACGACACCCCCATCTGCCCATCCCCCTGCCCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 34, 34, 34, 34, 34, 34, 34, 34, 34, 34, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 38, 39, 39, 39, 38, 39, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 36, 34, 38, 38, 38, 38, 38, 39, 39, 39, 39, 39, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 36, 38, 38, 38, 38, 38, 38, 38, 37, 39, 39, 37, 37, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 38, 37, 39, 38, 39, 39, 39, 39, 38, 39, 39, 38, 39, 37, 39, 38, 39, 37, 37, 39, 34, 38, 35, 39, 38, 39, 39, 37, 37, 15, 38, 38, 38, 37, 37, 38, 38, 37, 38, 38, 38, 39, 38, 38, 37, 39, 38, 39, 38, 37, 39, 39, 39, 39, 38, 37, 37, 39, 38, 34, 33, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 38, 39, 38, 38, 38, 39, 39, 39, 39, 37, 39, 37, 39, 39, 39, 39, 38, 33, 37, 38, 39, 39, 39, 38, 39, 39, 39, 37, 37, 39, 37, 38, 39, 38, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 35, 38, 39, 37, 39, 39, 39, 39, 33, 38, 39, 39, 39, 39, 38, 38, 38, 38, 38, 39, 38, 38, 38, 38, 38, 38, 38, 39, 38, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 36, 34, 37, 38, 39, 39, 36, 39, 39, 39, 39, 37, 37, 38, 38, 38, 39, 37, 39, 39, 38, 36, 38, 38, 38, 38, 37, 36, 38, 39, 37, 38, 16, 38, 39, 37, 36, 37, 38, 38, 38, 38, 38, 37, 38, 38, 36, 38, 36, 38, 39, 37, 37, 34, 34, 38, 38, 38, 38, 38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTNYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWADGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 326, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 325, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARITTATGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "16" }, { "name" : "Source-Identity", "value" : "94.50%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 314, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "AMDYW" }, { "name" : "translation", "value" : "AMDYWGQGTSVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ4*01" }, { "name" : "IMGT_gene", "value" : "IGHJ4" }, { "name" : "Source-Sequence", "value" : "M28834" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 299, "max" : 308, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "LRLRYFDYWGQGTTLTVSS" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "LRL" }, { "name" : "IMGT_allele", "value" : "IGHD1-2*01" }, { "name" : "IMGT_gene", "value" : "IGHD1-2" }, { "name" : "Source-Sequence", "value" : "M27107; J04565" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 358, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "DVMLVESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWADGSTNYNSALMSRLSISKDNSKSQVFFKMNSLQTDDTAMYYCARITTATGAMDYWGQGTSVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5909 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:26060:6302 (reversed)", "sequence" : "TTTAGAGGTGCAGCTGGTGGAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTTAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTTTATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAGGGATTGATCCTGAGATTGGTAATACTTTATATGACCCGAAGTTCCAGGGCAAGGCCAGTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGATAACTGATGACGCTGCTGTCGATTACTGTTCTAGAGTGTGTTGGACGAGGGACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCTGCAGCCAAAACGACACCCCCATCGGCTCATCCCCTGTGAG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 29, 16, 16, 16, 29, 33, 37, 37, 37, 30, 37, 37, 38, 38, 38, 37, 33, 32, 33, 16, 37, 38, 39, 39, 39, 39, 39, 39, 38, 38, 15, 36, 37, 39, 39, 39, 39, 39, 39, 39, 39, 35, 38, 38, 38, 37, 39, 39, 38, 38, 38, 38, 38, 16, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 16, 33, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 37, 39, 39, 16, 31, 35, 37, 37, 39, 16, 16, 37, 38, 16, 37, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 37, 39, 38, 39, 38, 37, 39, 38, 38, 38, 39, 38, 38, 38, 39, 39, 39, 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"truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVKLVESGGGLVQPGGSLRLSCATSGLTFTDYYMNWVRQPP GKELEWLGFIRNKANLYTTDYSASVKGRFTISRDNPQSILYLQMNTLTTEDSATY YCARD" }, { "name" : "IMGT_allele", "value" : "IGHV7-3*02" }, { "name" : "IMGT_gene", "value" : "IGHV7-3" }, { "name" : "Videntity", "value" : "96,38% (293/304 nt)" }, { "name" : "Source-Sequence", "value" : "E09031" }, { "name" : "Source-Mismatches", "value" : "20" }, { "name" : "Source-Identity", "value" : "93.42%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 376, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGGGLVHPGGSLRLSCSTSGFTFTDHYMSWVRQPPGKALEWLAFIRNKANGYTTEYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDVGSGMGLWFYDVWGAGTPFPVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.5917 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13061:6306 (reversed)", "sequence" : "GCCTCAGGTCCAGCTGCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCCGAGAAAATGTCCTGCCAGGCTTCTGGCTACAGGTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTAGAATGGATTGGTGCTTTTGATCCTGGAAATGGTGATCCTAGCTACAACCAGAAGTTCAAGGACAAGGCCAAACTGACTGCAGTCACGCCCGCCATCACTGCCTACATGGAACACAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGTGCAAGAAGAAGCGATTATGGAAAAAAGGCCTGGTTTGCTGACTGGGGCCAAGGGGCTCTGATCACTGTCTCGGCCGCCAAAACAACACCCCCAGCAGCCTATCCCCTGGAAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 32, 16, 16, 32, 32, 37, 37, 37, 37, 37, 37, 37, 16, 16, 37, 38, 16, 38, 38, 38, 38, 38, 39, 39, 33, 18, 15, 15, 15, 33, 38, 15, 32, 16, 37, 17, 37, 16, 36, 15, 37, 15, 15, 37, 38, 16, 14, 14, 14, 32, 14, 14, 32, 37, 37, 32, 14, 32, 14, 14, 16, 15, 16, 16, 17, 17, 17, 35, 16, 33, 15, 33, 16, 14, 33, 15, 33, 38, 39, 16, 16, 16, 15, 33, 37, 35, 16, 15, 16, 16, 16, 33, 38, 16, 16, 16, 30, 16, 33, 16, 31, 16, 16, 29, 33, 16, 37, 38, 16, 16, 29, 37, 39, 15, 16, 15, 16, 17, 33, 38, 39, 15, 15, 30, 14, 37, 27, 37, 27, 15, 37, 38, 37, 14, 14, 15, 33, 33, 37, 17, 37, 33, 29, 16, 37, 16, 16, 16, 31, 27, 16, 14, 16, 25, 16, 16, 29, 14, 14, 25, 16, 16, 16, 16, 25, 38, 37, 30, 27, 37, 16, 16, 14, 27, 29, 14, 16, 27, 29, 16, 29, 26, 28, 14, 25, 16, 16, 27, 34, 27, 27, 14, 27, 27, 28, 15, 26, 27, 27, 14, 27, 11, 14, 27, 34, 34, 36, 36, 34, 32, 34, 32, 36, 38, 13, 12, 32, 38, 37, 13, 23, 15, 28, 33, 26, 32, 13, 26, 12, 26, 33, 34, 32, 30, 37, 37, 37, 33, 38, 37, 34, 24, 34, 34, 26, 24, 2, 24, 14, 33, 25, 15, 15, 33, 34, 13, 13, 14, 34, 15, 27, 15, 35, 28, 15, 27, 28, 15, 38, 15, 15, 15, 28, 27, 12, 27, 27, 12, 31, 30, 16, 16, 16, 31, 16, 27, 16, 16, 15, 16, 27, 16, 16, 39, 39, 38, 38, 37, 16, 30, 14, 15, 30, 14, 30, 17, 16, 17, 38, 17, 37, 38, 14, 38, 33, 16, 38, 16, 32, 36, 37, 37, 30, 14, 15, 27, 15, 16, 29, 38, 33, 16, 16, 30, 14, 14, 14, 33, 33, 16, 29, 33, 14, 30, 14, 15, 15, 16, 16, 16, 17, 33, 17, 16, 16, 16, 15, 33, 29, 14, 14, 14, 14, 14, 36, 14, 14, 16, 32, 15, 37, 32, 32, 15, 14, 14, 32, 14, 32, 32, 36, 36, 16, 32, 33, 15, 16, 32, 33, 16, 16, 33, 16, 32, 35, 32, 37, 35, 33, 16, 16, 29, 29, 16 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGTVLARPGASEKMSCQAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWVKQRPGQGLEWIGA" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYRFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKDKAKLTAVTPAITAYMEHSSLTNEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "FDPGNGDP" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 335, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "WGQGALITVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 334, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARRSDYGKKAWFAD" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 294, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQPQQSGAELAKPGASVKMSCKASGYSFTRYWMHWVKQRP GQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYC " }, { "name" : "IMGT_allele", "value" : "IGHV1-7*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-7" }, { "name" : "Videntity", "value" : "96,21% (279/290 nt)" }, { "name" : "Source-Sequence", "value" : "M19898; J03832" }, { "name" : "Source-Mismatches", "value" : "45" }, { "name" : "Source-Identity", "value" : "84.48%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 367, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGTVLARPGASEKMSCQASGYRFTSYWMHWVKQRPGQGLEWIGAFDPGNGDPSYNQKFKDKAKLTAVTPAITAYMEHSSLTNEDSAVYYCARRSDYGKKAWFADWGQGALITVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5918 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:9496:6307 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38, 38, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPDLVKPGASVKISCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MYWVKQSHGKSLEWIGR" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSFTGYY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "SYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VNPNNGDI" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 322, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSTATGFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SRGDYGTSYGYFDVWGAGTTVTVSS" }, { "name" : "translation", "value" : "EVRLQQSGPELVKPGASVKISCKTSGYTFTEYTMHWVKQSH GKNLEWIGGINPNNGGTTYNQKFKGKATLTVDKSSNTAYMELRSLTSEDSAVYYC SR" }, { "name" : "CDR_length", "value" : "[8.8.14]" }, { "name" : "IMGT_allele", "value" : "IGHV1S59*01" }, { "name" : "gene_alias", "value" : "IGHV1S59" }, { "name" : "putative_limit", "value" : "3' side" }, { "name" : "Source-Sequence", "value" : "AY605265" }, { "name" : "Source-Mismatches", "value" : "33" }, { "name" : "Source-Identity", "value" : "88.78%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 312, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "FAYW" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "FAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "Y17588" }, { "name" : "Source-Mismatches", "value" : "0" }, { "name" : "Source-Identity", "value" : "100.00%" } ] }, { "name" : "D-REGION", "type" : "gene", "intervals" : [ { "min" : 308, "max" : 314, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "GGLNAFDYWGKGTMVTVSS" }, { "name" : "codon_start", "value" : "3" }, { "name" : "translation", "value" : "G" }, { "name" : "IMGT_allele", "value" : "IGHD4*01" }, { "name" : "IMGT_gene", "value" : "IGHD4" }, { "name" : "Source-Sequence", "value" : "DQ453153" }, { "name" : "Source-Mismatches", "value" : "1" }, { "name" : "Source-Identity", "value" : "85.71%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLQESGPDLVKPGASVKISCKASGYSFTGYYMYWVKQSHGKSLEWIGRVNPNNGDISYNQKFKGKAILTVDKSSSTAYMELRSLTSEDSAVYYCARSTATGFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.5920 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:10183:6308 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38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 37, 37, 37, 37, 37, 37, 37, 33, 33, 33, 33, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVKLVESGGGLVKPGGSLKLSCAAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MFWFRQTPEKRLEWVAT" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFTFSDFY" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "YYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ISNGGTYT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 329, "max" : 361, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTSVTVTS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 328, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARSGERYGAMDY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 300, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "EVQGVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTP EKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV5-4*02" }, { "name" : "IMGT_gene", "value" : "IGHV5-4" }, { "name" : "Videntity", "value" : 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"GGGCGAGGTGATGCTGGTGGAGTCAGGACCTGACCTGGTGAAACCTTCTCAGTCACTTTCACTCACCTGCACTGTTACTGGCTACTCCATCACCAGTGGTTATAGCTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATTCACTACAGTGGTCGCACTAACTACAACCCATCTCTCAAAAGTCGAATCTCTATCACTCGAGACACATCCAAGAACCAGTTCTTCCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTACGAGAGATGATTACGATGTTGTGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAGCCAAAACAACACCCCCATCAGTCCATCCCCTGAGAC", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 35, 33, 33, 33, 33, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 37, 38, 39, 39, 39, 39, 39, 39, 38, 39, 38, 39, 39, 39, 35, 39, 39, 39, 36, 37, 38, 38, 39, 38, 37, 38, 39, 39, 39, 38, 39, 39, 39, 37, 39, 33, 37, 39, 39, 38, 39, 38, 39, 38, 38, 38, 36, 36, 39, 39, 39, 36, 37, 38, 38, 39, 38, 39, 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37, 37, 37, 33, 33, 32, 32, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "EVMLVESGPDLVKPSQSLSLTCTVT" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 107, "max" : 157, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WHWIRQFPGNKLEWMGY" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 106, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GYSITSGYS" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 158, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IHYSGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 323, "max" : 355, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" 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"max" : 370, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLQQSGAELVKPGASVKLSCTAPGFNIKDTYIRWGKQRPEQGLEWIGRIDPANGNAKYDPKFQGKATITADTSSNTVYLHVSSLTSEDTAVYHCARWTFTTVGDGWFTYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.6005 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20963:6359 (reversed)", "sequence" : "TGGTGAGGTCCAGCTTCAGCAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCGGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGAGTCTATCTCTGGTACTTCGATGTCTGGGGCGCAGGGACCACGGTCACCGTCTCCTCAGCCAAAACAACAGCCCCATCGGTCCATCCCTTGCCGG", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 30, 32, 37, 37, 37, 37, 37, 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"max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "13" }, { "name" : "Source-Identity", "value" : "95.53%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : 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33, 33, 32, 33 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "VHWVRQPPGKGLEWLGV" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "GFSLTSYG" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 176, "max" : 289, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 175, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "IWAGGST" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 320, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGAGTTVTVSS" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 290, "max" : 319, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "ARVYLWYFDV" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 295, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPP GKGLEWLGVIRTGGITNYNSALMSRLSITKDNSKSQVFLKMNSLQTDDTAMYYCA R" }, { "name" : "IMGT_allele", "value" : "IGHV2-9-1*01" }, { "name" : "IMGT_gene", "value" : "IGHV2-9-1" }, { "name" : "Videntity", "value" : "97,25% (283/291 nt)" }, { "name" : "Source-Sequence", "value" : "AB538883" }, { "name" : "Source-Mismatches", "value" : "10" }, { "name" : "Source-Identity", "value" : "96.56%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 298, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "YWYFDVW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "YWYFDVWGAGTTVTVSS" }, { "name" : "IMGT_allele", "value" : "IGHJ1*01" }, { "name" : "IMGT_gene", "value" : "IGHJ1" }, { "name" : "Source-Sequence", "value" : "X05390" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "94.83%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 352, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARVYLWYFDVWGAGTTVTVSS" } ] } ] }, { "sequence" : { "name" : "ERR346596.6013 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:21933:6363 (reversed)", "sequence" : "GAAACAGGTGCAGCTGAAGGAGTCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGATGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTAATCCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAACAAGGCCACACTGACTGTAGACAAATCCTCCAGTACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTCCTGTGCAGGAGGTAACCCCTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAGCCAAAACAACACCCCCATCGGCTTATCCATTGACCT", "circular" : false, "sequenceType" : "Nucleotide", "qualities" : [ 33, 33, 33, 33, 33, 37, 37, 33, 37, 37, 37, 37, 38, 38, 38, 38, 38, 38, 38, 38, 38, 38, 39, 37, 39, 39, 39, 37, 38, 38, 38, 38, 38, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 38, 39, 39, 39, 39, 39, 39, 39, 39, 38, 37, 39, 39, 39, 39, 39, 39, 39, 39, 36, 39, 39, 38, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 39, 33, 39, 39, 37, 37, 39, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 38, 39, 39, 39, 38, 38, 38, 39, 37, 37, 39, 36, 37, 38, 39, 37, 38, 38, 38, 39, 38, 37, 39, 37, 37, 37, 37, 39, 39, 39, 39, 39, 39, 37, 39, 39, 39, 37, 37, 38, 39, 39, 39, 39, 37, 37, 38, 38, 39, 39, 37, 36, 38, 39, 38, 38, 38, 39, 39, 36, 33, 38, 38, 38, 37, 32, 35, 35, 39, 39, 38, 37, 38, 39, 39, 39, 39, 37, 39, 39, 39, 39, 39, 39, 39, 39, 38, 38, 38, 39, 39, 38, 39, 39, 38, 39, 39, 39, 39, 39, 39, 36, 38, 39, 39, 39, 39, 39, 39, 39, 38, 39, 39, 38, 38, 37, 39, 39, 38, 38, 38, 38, 37, 37, 38, 38, 38, 38, 37, 39, 39, 35, 37, 36, 39, 39, 39, 39, 39, 39, 38, 39, 38, 38, 39, 38, 39, 38, 38, 39, 39, 37, 39, 39, 37, 37, 37, 37, 37, 37, 39, 39, 39, 39, 37, 38, 38, 30, 34, 38, 38, 38, 39, 39, 37, 39, 39, 39, 39, 38, 34, 39, 39, 39, 39, 39, 38, 39, 39, 39, 39, 39, 37, 39, 34, 36, 34, 35, 39, 36, 33, 37, 39, 37, 39, 36, 39, 39, 38, 36, 38, 38, 33, 37, 37, 37, 39, 39, 38, 37, 37, 39, 39, 39, 37, 38, 39, 39, 36, 39, 39, 38, 37, 37, 38, 39, 38, 34, 36, 32, 38, 39, 39, 36, 17, 39, 39, 38, 34, 39, 38, 36, 36, 36, 38, 38, 37, 37, 38, 37, 17, 36, 38, 37, 38, 37, 37, 37, 37, 37, 37, 37, 37, 37, 32, 32, 33, 33, 32 ], "chromatogram" : null }, "annotations" : [ { "name" : "FR1", "type" : "FR", "intervals" : [ { "min" : 5, "max" : 79, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCKAS" } ] }, { "name" : "FR2", "type" : "FR", "intervals" : [ { "min" : 104, "max" : 154, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "1" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "MHWMKQRPGQGLEWIGE" } ] }, { "name" : "CDR1", "type" : "CDR", "intervals" : [ { "min" : 80, "max" : 103, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "1" }, { "name" : "translation", "value" : "GYTFTSYW" } ] }, { "name" : "FR3", "type" : "FR", "intervals" : [ { "min" : 179, "max" : 292, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "NYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSC" } ] }, { "name" : "CDR2", "type" : "CDR", "intervals" : [ { "min" : 155, "max" : 178, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "INPSNGRT" } ] }, { "name" : "FR4", "type" : "FR", "intervals" : [ { "min" : 317, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "WGQGTLVTVSA" } ] }, { "name" : "CDR3", "type" : "CDR", "intervals" : [ { "min" : 293, "max" : 316, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "AGGNPFAY" } ] }, { "name" : "V-REGION", "type" : "gene", "intervals" : [ { "min" : 5, "max" : 298, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "FR_length", "value" : "[25.17.38.11]" }, { "name" : "translation", "value" : "QVQLQQPGPDLLKPGAPVKLSCKASGYTFTDYWMNWVKQRP GRGLEWIGRIDPSDSETHYNQKFKDKATLTVDKSSSTAYIQLSSLTSEDSAVYYC AR" }, { "name" : "IMGT_allele", "value" : "IGHV1-69*02 or IGHV1-74*01" }, { "name" : "IMGT_gene", "value" : "IGHV1-69 or IGHV1-74" }, { "name" : "Videntity", "value" : "91,50% (269/294 nt)" }, { "name" : "Source-Sequence", "value" : "U01972" }, { "name" : "Source-Mismatches", "value" : "37" }, { "name" : "Source-Identity", "value" : "87.41%" } ] }, { "name" : "J-REGION", "type" : "gene", "intervals" : [ { "min" : 304, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "translation", "value" : "WFAYW" }, { "name" : "codon_start", "value" : "2" }, { "name" : "translation", "value" : "WFAYWGQGTLVTVSA" }, { "name" : "IMGT_allele", "value" : "IGHJ3*01" }, { "name" : "IMGT_gene", "value" : "IGHJ3" }, { "name" : "Source-Sequence", "value" : "M19899; J03832" }, { "name" : "Source-Mismatches", "value" : "3" }, { "name" : "Source-Identity", "value" : "93.48%" } ] }, { "name" : "VDJ-REGION", "type" : "Region", "intervals" : [ { "min" : 5, "max" : 349, "direction" : "Right", "truncatedMin" : false, "truncatedMax" : false } ], "qualifiers" : [ { "name" : "startMotifDifferences", "value" : "0" }, { "name" : "endMotifDifferences", "value" : "0" }, { "name" : "translation", "value" : "QVQLKESGAELVKPGASVKLSCKASGYTFTSYWMHWMKQRPGQGLEWIGEINPSNGRTNYNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYSCAGGNPFAYWGQGTLVTVSA" } ] } ] }, { "sequence" : { "name" : "ERR346596.6014 BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:20944:6363 (reversed)", "sequence" : "GCACCAGGTCCAACTGCATCAATCTATCCCTTGGCATAGACCAGAAGAGCACACGTTTGAACTCCAGTCACAGTTCTGTATATCGTATGTCGGCTTCTGCTTGATAAAATAAATCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTCATAATTATGCAACACATTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTTTATACCTGCAGATGAACAACTTAAAAGCTGAAGACTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGTTCCAGGTCCAACTGCATCAACCTATCCCTTGGCAT", "circular" : false, "sequenceType" : "Nucleotide", 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